mRNA_L-elsbetiae_contig802.17005.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig802.17005.1 vs. uniprot
Match: A0A6H5K059_9PHAE (G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K059_9PHAE) HSP 1 Score: 488 bits (1256), Expect = 5.650e-164 Identity = 331/607 (54.53%), Postives = 359/607 (59.14%), Query Frame = 1 Query: 55 MMPTRQLPLSLGSASRRGTVLTHRCQRQ-------HQRQSTAASQRSTDMPPAAGGRDPDEQLLQLENEYSTLKVNWFPGHMVKATKVIREKLKQVDMVFEVRDARIPFTSANDDLDKIVGPSKARLIVLNKADLSNQALEQRVLQRFREQGQTAVYACGRTGTNVHKLLAWARERGARRGGFATTGAVAMVVGMPNVGKSSLINLLRGKA--AGRGGGRRVGXXXXXXGEGAKQV------------------------ARVGAMPGVTRQVSAFRIGSTPPLYLVDTPGVMVPRVERVTAGLFLALTRAVPDSVVPPDILVSFMLRIVRSRRLSGAQ-KSLRAPLDSRSTSAAGSPRXXXXXXXXXXXXXXIAAWLLSSQQEAGASPRTTTHPLSRDGEAEDKGREADTTRTGRGRRQDDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEALLEAVERESGAEGKPAPEARRICCRFLLDAFRDGQFGRITLDSVPRVRRIKDAGLLPPERQSRAGWAASHPAPHPAAGLAAERGEXXXXXXXXXXXXXXXXXXXXXXGRGAGRRGDSGRPPD-SADSGLAERLVRDWSSADAWE 1770 M+P RQ+PL L A RR V THR Q H+ S + S S D +L++LE EY+TLKVNWFPGHMVKATKVIREKLKQVDMVFEVRDARIPFTSAN DLDKIVGPSKARLIVLNKA + Q L ++ F G+ AVYACGRTGTNV+KLLAWARERGARRG F+TTGA+AMVVGMPNVGKSSLINLLRGKA +G GGG GEGAKQV ARVGAMPGVTRQVSAFRI S PPLYLVDTPGVMVPRVE TAGLFLALTRAVPDS VPPD+LV FMLR+VRSRR SGA+ +S+ AP R+TS A + R IAAWLL Q AG + RTTT TG DD EALLEAVERESGAEGKPA EARRICCRFLLDAFRDGQFGRITLDSVPR R +K + A AS P P A L A RG+ AGR GR P S +S LAERLVRDWSSADAWE Sbjct: 1 MIPRRQVPLVLARARRRRAV-THRYQHSVAAVPTPHRSFSGSCSHESVT---GMDENPTDSELMRLEEEYATLKVNWFPGHMVKATKVIREKLKQVDMVFEVRDARIPFTSANQDLDKIVGPSKARLIVLNKAR-ARQCLV--AVRDFPALGKAAVYACGRTGTNVNKLLAWARERGARRGEFSTTGAIAMVVGMPNVGKSSLINLLRGKANWSGSGGG---------DGEGAKQVCNRPALAAPFSPLRLCRAVPSREVARVGAMPGVTRQVSAFRIASNPPLYLVDTPGVMVPRVESKTAGLFLALTRAVPDSAVPPDVLVGFMLRVVRSRRSSGARDRSVTAPSAPRATSRAAARRPASQPSPSKA----IAAWLL---QPAGKAERTTTDA---------------NGATGPSISDDDETSAVGKHGKQRQADREYTSEPGDDEKEDRGDWEREDDMEALLEAVERESGAEGKPALEARRICCRFLLDAFRDGQFGRITLDSVPRRRVLKT---------NTAAELASGPLPPGWAQLVARRGKDRGRAE-------------------AGRVVREGRRPSASQESDLAERLVRDWSSADAWE 541
BLAST of mRNA_L-elsbetiae_contig802.17005.1 vs. uniprot
Match: A0A835Z590_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z590_9STRA) HSP 1 Score: 199 bits (505), Expect = 1.350e-53 Identity = 171/502 (34.06%), Postives = 225/502 (44.82%), Query Frame = 1 Query: 220 LLQLENEYSTLKVNWFPGHMVKATKVIREKLKQ------------------VDMVFEVRDARIPFTSANDDLDKIVGPSKARLIVLNKADLSNQALEQRVLQRFREQ------------------------GQTAVYACG------------RTGT---------------NVHKLLAWARERGARRGGFATTGAVAMVVGMPNVGKSSLINLLRGKAAGRGGGRRVGXXXXXXGEGAKQVARVGAMPGVTRQ-------------VSAFRIGSTP-PLYLVDTPGVMVPRVERVTAGLFLALTRAVPDSVVPPDILVSFMLRIVRSRRLSGAQKSLRAPLD-SRSTSAAGSPRXXXXXXXXXXXXXXIAAWLLSSQQEAGASPRTTTHPLSRDGEAEDKGREADTTRTGRGRRQDDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEALLEAVERESGAEGKPAPEARRICCRFLLDAFRDGQFGRITLDSV 1473 + + E ++ ++VNWFPGHM KA K +R +LKQ VD+V EVRDARIPF+SAN +LD+++G SKARL+VLNK DL+ ++ V +R R + G+ +Y G RTG + LL WARE+GA RG F T GA+AMVVGMPNVGKS+LIN +R RGGG+ G ++V RVGA PGV + +FR+ P PLY+VDTPGVMVP + T GL LALT AVPDSVV ++LV ++ ++ +R GA S A LD ST+ + + W S+ EA PR T R+G A G R R EALL A ER GA GK + R++ +L FR G FGR++LD+ Sbjct: 1 MEEWERPFAGVRVNWFPGHMAKAQKSMRTRLKQRLPLSPLPPPPLLLLALGVDVVLEVRDARIPFSSANHELDRLIG-SKARLVVLNKEDLAEPSMRSAVTERLRAERKDTGETTAVMDTASEVSRVRRALGKGVLYTNGSESDPPTCLWHPRTGXXXXXXXXGDGPGGGKGIPGLLRWAREKGALRGQFVTLGAMAMVVGMPNVGKSTLINHMRRLC--RGGGKGAG----------RKVVRVGATPGVXXXXXXXXXXXXXXXXIDSFRVSELPQPLYMVDTPGVMVPNIASPTVGLRLALTAAVPDSVVGEEVLVQYLCALLNAR---GAVASCAAVLDLPESTTLLDAEASEKLHGGPKTHAVGMRGW---SKCEA---PRATV----RNGVATKDGARRLACRLRR---------------------------------------CCCRACEALLAAAERRCGAAGKLEEQRRQMAASHVLALFRAGAFGRMSLDAA 437
BLAST of mRNA_L-elsbetiae_contig802.17005.1 vs. uniprot
Match: A0A024UI85_9STRA (Mitochondrial GTPase 1 n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024UI85_9STRA) HSP 1 Score: 168 bits (426), Expect = 5.040e-44 Identity = 108/298 (36.24%), Postives = 157/298 (52.68%), Query Frame = 1 Query: 256 VNWFPGHMVKATKVIREKLKQVDMVFEVRDARIPFTSANDDLDKIVGPSKARLIVLNKADLSNQALEQRVLQRFREQGQTAVYACGRTGTNVHKLLAWARERGARRGGF-ATTGAVAMVVGMPNVGKSSLINLLRGKAAGRGGGRRVGXXXXXXGEGAKQVARVGAMPGVTRQVSAFRIGSTPPLYLVDTPGVMVPRVERVTAGLFLALTRAVPDSVVPPDILVSFMLRIVRSRRLSGAQKSL--RAPLDSRSTSAAGSPRXXXXXXXXXXXXXXIAAWLLSSQQEAGASPRTTTHPL 1140 +NWFPGHM A ++ +L VD++ EVRDARIP++SAN LD I G K RL+VLNK+DL+N +++RV RF EQ ++ G ++ +L W E G + F +T G V MVVG+PNVGKSS+IN R + +G K+ A VG PGVT + ++ TP +Y++DTPGVM+P + + GL LALT A+ D +V +++ +ML ++ + K+L P D A + +AA L + G+ R T PL Sbjct: 17 INWFPGHMNSARNAMKAQLNSVDVIIEVRDARIPWSSANPVLDGI-GSHKPRLVVLNKSDLANSNMKERVEYRFDEQNMDCMFTSVIKGKHMRNILQWCTEHGKSQ--FQSTAGTVVMVVGVPNVGKSSMINAFRSIST-----------SLKLSKGKKK-AVVGPTPGVTLRTDIIKVNETPAIYVMDTPGVMLPNIPSPSVGLKLALTGAIKDEIVGEELIADYMLFLLNQMNSTQYVKALGLSGPTDDIDELMASITKQSGGVGKPEERQRLLAAQYLLKEFRRGSFGRFTLDPL 299
BLAST of mRNA_L-elsbetiae_contig802.17005.1 vs. uniprot
Match: A0A1V9YN62_9STRA (Mitochondrial GTPase 1 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YN62_9STRA) HSP 1 Score: 168 bits (425), Expect = 6.990e-44 Identity = 98/232 (42.24%), Postives = 139/232 (59.91%), Query Frame = 1 Query: 244 STLKVNWFPGHMVKATKVIREKLKQVDMVFEVRDARIPFTSANDDLDKIVGPSKARLIVLNKADLSNQALEQRVLQRFREQGQTAVYACGRTGTNVHKLLAWARERGARRGGFA-TTGAVAMVVGMPNVGKSSLINLLRGKAAGRGGGRRVGXXXXXXGEGAKQVARVGAMPGVTRQVSAFRIGSTPPLYLVDTPGVMVPRVERVTAGLFLALTRAVPDSVVPPDILVSFML 936 +T +NWFPGHM A ++ +L +D++ EVRDARIPF+SAN LD I G K RL+VLNK+DL+N ++ RV RF + G +++ G ++ K+L W G + F T G V MVVG+PNVGKSSLIN R ++ +G K+ A VGA PGVT + F++ +P +Y++DTPGVM+P + GL LALT A+ D VV +++ +ML Sbjct: 13 TTSPINWFPGHMNTAKNSMKAQLGNIDVIIEVRDARIPFSSANPLLDGI-GNHKPRLVVLNKSDLANSNMKARVEARFEDAGMDSLFTSVAKGKHIQKILQWCTTHGKSQ--FQQTAGTVVMVVGVPNVGKSSLINSFRSISS-----------SLKLAKGKKK-ATVGATPGVTVRTDIFKVNESPAIYVMDTPGVMLPNIPSPDVGLKLALTGAIKDEVVGTELIADYML 229
BLAST of mRNA_L-elsbetiae_contig802.17005.1 vs. uniprot
Match: A0A418AEZ7_9STRA (CP-type G domain-containing protein (Fragment) n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418AEZ7_9STRA) HSP 1 Score: 167 bits (422), Expect = 1.000e-43 Identity = 97/243 (39.92%), Postives = 142/243 (58.44%), Query Frame = 1 Query: 256 VNWFPGHMVKATKVIREKLKQVDMVFEVRDARIPFTSANDDLDKIVGPSKARLIVLNKADLSNQALEQRVLQRFREQGQTAVYACGRTGTNVHKLLAWARERGARRGGF-ATTGAVAMVVGMPNVGKSSLINLLRGKAAGRGGGRRVGXXXXXXGEGAKQVARVGAMPGVTRQVSAFRIGSTPPLYLVDTPGVMVPRVERVTAGLFLALTRAVPDSVVPPDILVSFMLRIVRSRRLSGAQKSL 981 +NWFPGHM A ++ +L VD++ EVRDARIP++SAN LD I G K RL+VLNK+DL+N +++RV RF EQ ++ G ++ +L W E G + F +T G V MVVG+PNVGKSS+IN R + +G K+ A VG PGVT + ++ TP +Y++DTPGVM+P + + GL LALT A+ D +V +++ +ML ++ + K+L Sbjct: 40 INWFPGHMNSARNAMKAQLNSVDVIIEVRDARIPWSSANPVLDGI-GSHKPRLVVLNKSDLANSNMKERVEYRFDEQNMDCMFTSVIKGKHIRNILQWCTEHGKSQ--FQSTAGTVVMVVGVPNVGKSSMINAFRSIST-----------SLKLSKGKKK-AVVGPTPGVTLRTDIIKVNETPAIYVMDTPGVMLPNIPSPSVGLKLALTGAIKDEIVGEELIADYMLFLLNQMNSTQYVKAL 267
BLAST of mRNA_L-elsbetiae_contig802.17005.1 vs. uniprot
Match: A0A1V9Y456_9STRA (Mitochondrial GTPase 1 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y456_9STRA) HSP 1 Score: 166 bits (419), Expect = 4.730e-43 Identity = 100/250 (40.00%), Postives = 145/250 (58.00%), Query Frame = 1 Query: 244 STLKVNWFPGHMVKATKVIREKLKQVDMVFEVRDARIPFTSANDDLDKIVGPSKARLIVLNKADLSNQALEQRVLQRFREQGQTAVYACGRTGTNVHKLLAWARERGARRGGF-ATTGAVAMVVGMPNVGKSSLINLLRGKAAGRGGGRRVGXXXXXXGEGAKQVARVGAMPGVTRQVSAFRIGSTPPLYLVDTPGVMVPRVERVTAGLFLALTRAVPDSVVPPDILVSFMLRIVRSRRLSGAQKSLRAP 990 +T +NWFPGHM A ++ +L +D++ EVRDARIPFTSAN LD I G K RL+VLNK+DL+N ++ RV RF + +++ G ++ K+L W G + F +T G V M+VG+PNVGKSS+IN R ++ +G K+ A VGA PGVT + F++ +P +Y++DTPGVM+P + GL LALT A+ D +V ++L +ML I+ K+L P Sbjct: 11 TTSVINWFPGHMNMAKNSMKAQLGNIDVIIEVRDARIPFTSANPLLDGI-GNHKPRLVVLNKSDLANSNMKARVEARFDHENIDSMFTSVIKGKHIQKILQWCTAAGKSQ--FQSTAGTVVMIVGIPNVGKSSMINAFRSLSS-----------SLKVSKGKKK-AVVGATPGVTVRTDMFKVNESPAIYVMDTPGVMLPNIPTPEVGLKLALTGAIKDDIVGVELLADYMLFILNRMNSKTYVKALGLP 245
BLAST of mRNA_L-elsbetiae_contig802.17005.1 vs. uniprot
Match: A0A6G0WZQ3_9STRA (Mitochondrial GTPase 1 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WZQ3_9STRA) HSP 1 Score: 166 bits (419), Expect = 4.980e-43 Identity = 95/228 (41.67%), Postives = 134/228 (58.77%), Query Frame = 1 Query: 256 VNWFPGHMVKATKVIREKLKQVDMVFEVRDARIPFTSANDDLDKIVGPSKARLIVLNKADLSNQALEQRVLQRFREQGQTAVYACGRTGTNVHKLLAWARERGARRGGF-ATTGAVAMVVGMPNVGKSSLINLLRGKAAGRGGGRRVGXXXXXXGEGAKQVARVGAMPGVTRQVSAFRIGSTPPLYLVDTPGVMVPRVERVTAGLFLALTRAVPDSVVPPDILVSFML 936 +NWFPGHM A ++ +L VD++ EVRDARIP++SAN LD I G K RL+VLNK DL+N +++RV RF EQ ++ G ++ +L W E G + F +T G V MVVG+PNVGKSS+IN R + +G K+ A VG PGVT + ++ TP +Y++DTPGVM+P + GL LALT A+ D +V +++ +ML Sbjct: 17 INWFPGHMNSARNAMKAQLNSVDVIIEVRDARIPYSSANPLLDGI-GNHKPRLVVLNKTDLANSNMKERVAYRFHEQNMDCMFTSVIKGKHIRNILDWCTEHGKSQ--FKSTAGTVVMVVGIPNVGKSSMINAFRSIST-----------SLKLSKGKKK-AVVGPTPGVTLRTDIIKVNETPAIYVMDTPGVMLPNIPTPDVGLKLALTGAIKDDIVGVELIADYML 229
BLAST of mRNA_L-elsbetiae_contig802.17005.1 vs. uniprot
Match: A0A485KRB5_9STRA (Mitochondrial GTPase 1 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KRB5_9STRA) HSP 1 Score: 165 bits (418), Expect = 8.530e-43 Identity = 95/232 (40.95%), Postives = 136/232 (58.62%), Query Frame = 1 Query: 244 STLKVNWFPGHMVKATKVIREKLKQVDMVFEVRDARIPFTSANDDLDKIVGPSKARLIVLNKADLSNQALEQRVLQRFREQGQTAVYACGRTGTNVHKLLAWARERGARRGGF-ATTGAVAMVVGMPNVGKSSLINLLRGKAAGRGGGRRVGXXXXXXGEGAKQVARVGAMPGVTRQVSAFRIGSTPPLYLVDTPGVMVPRVERVTAGLFLALTRAVPDSVVPPDILVSFML 936 +T +NWFPGHM A ++ +L VD++ EVRDARIP++SAN LD I G K RL+VLNK+DL+N + +RV RF EQ ++ G ++ +L W E G + F +T G V M+ G+PNVGKSS+IN RG + +G K+ A VG PGVT + ++ TP +Y++DTPGVM+P + GL LALT A+ D +V +++ +ML Sbjct: 20 TTSNINWFPGHMNSARNAMKAQLNSVDVIIEVRDARIPWSSANPLLDGI-GNHKPRLVVLNKSDLANSNMRERVEYRFHEQDMDCMFTSVIKGKHIRNILQWCTEHGKSQ--FQSTAGTVVMICGIPNVGKSSMINAFRGIST-----------SLKLSKGKKK-AVVGPTPGVTLRTDIIKVNETPAIYVMDTPGVMLPNIPTPDIGLKLALTGAIKDDIVGVELIADYML 236
BLAST of mRNA_L-elsbetiae_contig802.17005.1 vs. uniprot
Match: A0A388K8C0_CHABU (Radical S-adenosyl methionine domain-containing protein 1, mitochondrial n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388K8C0_CHABU) HSP 1 Score: 176 bits (445), Expect = 9.790e-43 Identity = 102/237 (43.04%), Postives = 144/237 (60.76%), Query Frame = 1 Query: 256 VNWFPGHMVKATKVIREKLKQVDMVFEVRDARIPFTSANDDLDKIVGPSKARLIVLNKADLSNQALEQRVLQRFREQGQTAVY-------ACGRTGTNVHKLLAWARERGARRGGFATTGAVAMVVGMPNVGKSSLINLLRGKAAGRGGGRRVGXXXXXXGEGAKQVARVGAMPGVTRQVSAFRIGSTPPLYLVDTPGVMVPRVERVTAGLFLALTRAVPDSVVPPDILVSFMLRIV 945 VNWFPGHM KAT+ IR+ L++VD+V EVRDARIP +SAN+ L ++ K RL+VLNK DL NQ L+QR Q F QG ++ + G+ V +L R + + MV+G+PNVGKS++IN + + G+ G G+ + A++G +PGVTR+V+ F++G P Y++DTPGVMVP V+ T GL LALT AV DSVV + L ++LR++ Sbjct: 1024 VNWFPGHMAKATREIRDTLRRVDLVVEVRDARIPLSSANEQLSDMIS-HKRRLVVLNKMDLGNQNLQQRWAQYFETQGLRHLFVNAHHQKSLGQLLNTVQSILTEERAK--------EDSLMVMVIGIPNVGKSAIINGIYRLSTGQSA---QGKRQSTQGKAPLKTAKIGPLPGVTREVACFKVGEAPSTYIMDTPGVMVPNVKEATVGLKLALTGAVKDSVVGEERLARYLLRVL 1248
BLAST of mRNA_L-elsbetiae_contig802.17005.1 vs. uniprot
Match: T0RG29_SAPDV (Mitochondrial GTPase 1 n=2 Tax=Saprolegnia TaxID=4769 RepID=T0RG29_SAPDV) HSP 1 Score: 163 bits (412), Expect = 4.780e-42 Identity = 94/232 (40.52%), Postives = 136/232 (58.62%), Query Frame = 1 Query: 244 STLKVNWFPGHMVKATKVIREKLKQVDMVFEVRDARIPFTSANDDLDKIVGPSKARLIVLNKADLSNQALEQRVLQRFREQGQTAVYACGRTGTNVHKLLAWARERGARRGGF-ATTGAVAMVVGMPNVGKSSLINLLRGKAAGRGGGRRVGXXXXXXGEGAKQVARVGAMPGVTRQVSAFRIGSTPPLYLVDTPGVMVPRVERVTAGLFLALTRAVPDSVVPPDILVSFML 936 +T +NWFPGHM A ++ +L +D++ EVRDARIPF+SAN LD I G K RL+VLNK+DL+N ++ RV RF E ++ G ++ +L W G + F +T G V M+VG+PNVGKSS+IN R ++ +G K+ A VGA PGVT + F++ P +Y++DTPGVM+P + GL LALT A+ D +V +++ +ML Sbjct: 12 TTSAINWFPGHMNSAKNSMKAQLGSIDVIIEVRDARIPFSSANPLLDGI-GNHKPRLVVLNKSDLANSNMKARVEARFEEADMDCLFTSVIKGKHIQHILKWCNTHGKSQ--FQSTAGTVVMIVGVPNVGKSSMINAFRSISS-----------SLKLSKGKKK-ATVGATPGVTVRTDIFKVNEAPAIYVMDTPGVMLPNIPSPDVGLKLALTGAIKDDIVGAELIADYML 228 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig802.17005.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig802.17005.1 >prot_L-elsbetiae_contig802.17005.1 ID=prot_L-elsbetiae_contig802.17005.1|Name=mRNA_L-elsbetiae_contig802.17005.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=598bp YPSSEHPGGLGGSGSHANMMPTRQLPLSLGSASRRGTVLTHRCQRQHQRQback to top mRNA from alignment at L-elsbetiae_contig802:9335..13675- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig802.17005.1 ID=mRNA_L-elsbetiae_contig802.17005.1|Name=mRNA_L-elsbetiae_contig802.17005.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4341bp|location=Sequence derived from alignment at L-elsbetiae_contig802:9335..13675- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig802:9335..13675- >mRNA_L-elsbetiae_contig802.17005.1 ID=mRNA_L-elsbetiae_contig802.17005.1|Name=mRNA_L-elsbetiae_contig802.17005.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3588bp|location=Sequence derived from alignment at L-elsbetiae_contig802:9335..13675- (Laminarionema elsbetiae ELsaHSoW15)back to top |