mRNA_L-elsbetiae_contig8005.16991.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig8005.16991.1 vs. uniprot
Match: D8LK34_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK34_ECTSI) HSP 1 Score: 736 bits (1901), Expect = 3.660e-255 Identity = 452/649 (69.65%), Postives = 495/649 (76.27%), Query Frame = 1 Query: 1 LPHRLLAHTLVEALWDQLLLDVSGGGGVFTLGDTSRLIGTTVAAAAEDIKRIAVEQSALSGFRVEGD-NSTSASAGGGSGRAGLGGPRSSKITRREASVVLIDRTLDLAAPASHGGSLLQRILSSISRTGTAFSA-------SEATGENWSPASAAHQQDVGVTLPMLAPGLGLPAGPAGRPGSSSRLEGE----------KPPRLLAMKALAGFSWPAPPALCHSGSSADAA-GVVHAMASLREEEGQAALIAALEKCVSDNGCTPPPRKRRGMGSSIMALVTSLARGSPCPGGLSGDRVCFRCRGVIQVALAAMEAHQRTSSLAGSGWPETVGAERVQLQQLRDGSTVDAVMEQLCATLHQAPS---SASSSSPP----TSGPGAVRASSSTSEALLLALRGVSLAGESIRAEDARSFRKAWISRIMAGGFREEGSGIPPGVAEAVEPLLSGQEGAHTRAPGLGSGGLLGEQSAEEAGVLLELEDIARERTQRLREAAASRSFHLKNTGVLRDLAFEPYTFVASAAVTAPGAGTSRGEAEGGGXXXXXXEEGWDDWGDDENAHGATGVADGEGTS-TEHTTECDTLVGRLAGLLLDQTSPDVPDLHEAKLVSAASVGLGLLSSGLKKLSRIGGAAGGAGRGRHTKSR 1866 L +RLLAHTLVEALWDQLLLDVSGGGGVFTLGDTSRLIGTTVAA AED+KR+++E+ A GF EG +S S+ GGG G G G RREASVVLIDR LD+AA ASHGGSLLQRILSSI RTGT SA EA +WSP++AAHQQDVGV LPML PGLGLPA A S KPPRLLAMKAL+GF W APP+LCHSG A AA GVVHAMA EEEGQAALI+ALEKCVSDNGC PPPRKRRGMGSSIMALVTSLARG+P GGLSGDRVCF+ RGV+QVALAAMEAHQRTSSLAGSGW ETV AERVQL+QLRDGSTVD VMEQLCATL++AP S+SSSSPP + G GA R SS EALLLALRGVSLAGESI A+DA SFRKAWISR++AGGFRE GSG+P GVAEAV+ + S ++ T AP + + G EEAGVLLELEDIARERTQRLRE A+SRSFHLK+T VLRDL FEPYTFVASA XXXXXXEEGWDDWG+DE G GVA+ +G S TEHT ECDTLVGRLAGLLLD+T PDVPDL+EAK+VS ASVGLGLLSSGLKKL R+GGA GG RGRH +SR Sbjct: 314 LRYRLLAHTLVEALWDQLLLDVSGGGGVFTLGDTSRLIGTTVAAVAEDLKRVSLERPAPPGFGGEGGADSASSGRGGGFGSDGAG-----PAARREASVVLIDRNLDVAAAASHGGSLLQRILSSIDRTGTPNSAVPATPSSPEAVAIDWSPSAAAHQQDVGVVLPMLTPGLGLPARAAAVERSGXXXXXXXXXXXXXXXGKPPRLLAMKALSGFPWRAPPSLCHSGGDAGAAAGVVHAMACHGEEEGQAALISALEKCVSDNGCVPPPRKRRGMGSSIMALVTSLARGNPRAGGLSGDRVCFKSRGVLQVALAAMEAHQRTSSLAGSGWSETVAAERVQLRQLRDGSTVDVVMEQLCATLNRAPPMDFSSSSSSPPGGTASLGAGAARTGSSAREALLLALRGVSLAGESIGAQDATSFRKAWISRMLAGGFREGGSGVPAGVAEAVDQIRS-RKRERTTAPEPAAESV-GTGEVEEAGVLLELEDIARERTQRLREVASSRSFHLKSTAVLRDLGFEPYTFVASATAXXXXXXXXXXXXXXXXXXXXXXEEGWDDWGEDEAGEGTPGVANDDGGSRTEHTAECDTLVGRLAGLLLDRTRPDVPDLYEAKVVSPASVGLGLLSSGLKKLGRMGGAGGGVHRGRHKQSR 955 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig8005.16991.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig8005.16991.1 >prot_L-elsbetiae_contig8005.16991.1 ID=prot_L-elsbetiae_contig8005.16991.1|Name=mRNA_L-elsbetiae_contig8005.16991.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=623bp LPHRLLAHTLVEALWDQLLLDVSGGGGVFTLGDTSRLIGTTVAAAAEDIKback to top mRNA from alignment at L-elsbetiae_contig8005:210..6697+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig8005.16991.1 ID=mRNA_L-elsbetiae_contig8005.16991.1|Name=mRNA_L-elsbetiae_contig8005.16991.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6488bp|location=Sequence derived from alignment at L-elsbetiae_contig8005:210..6697+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig8005:210..6697+ >mRNA_L-elsbetiae_contig8005.16991.1 ID=mRNA_L-elsbetiae_contig8005.16991.1|Name=mRNA_L-elsbetiae_contig8005.16991.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3738bp|location=Sequence derived from alignment at L-elsbetiae_contig8005:210..6697+ (Laminarionema elsbetiae ELsaHSoW15)back to top |