mRNA_L-elsbetiae_contig80.16986.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig80.16986.1 vs. uniprot
Match: D8LMA1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMA1_ECTSI) HSP 1 Score: 374 bits (960), Expect = 4.060e-114 Identity = 398/746 (53.35%), Postives = 453/746 (60.72%), Query Frame = 2 Query: 338 VHSGRLCFSAQELVVDVIKDELGNKTGMGKEETNDWVIRKTIGGPLRFRPKTREELQNELYRLEKKHRQALNRLKVRSRTGG----GGIGLDAEPATTGERAPAPLEGQVDAGPEAALSEGVTPPQQEHQASGTKELVRLSEALEEVDALRVSVRSRDAALQAQAEAVDQLQLENRELRGVQERLARKERRVRDLKKKNAQLGEQHTALLEDYEAGQEQIHHLKAQLALRKEEGLAEADEFREHSLRQAEEVSVLLKRXXXXXXXXXXXXXXXXXXXXXXXXASRQAISRAEAAEKSLQAAEREGRRVREQNETMLAEIQQRLGKEAADAA------------------------GLRERGRELAVEAKXXXXXXXXXXXXXXXXXXXXXXXXXALRASKARMRGNRKLAGGLLSLESLEAEKLAKEALAREAGEAKALLEGERKRADDEGEARSRLESLLAAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDKETDGRIGEDRSRRVSFEGGDAREKVGVGGGEAEATKRRELAESEEIIEEMENELREQAEHTXXXXXXXXXXXXXXXSATKVADDLREKNSALTAQLNAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHLRPSVSAEEEERKLRGELAAIKASERASQSECRSLRLELDDAKASCELHKARVKDLVGRKISTILDGSGXXXXXDDAVAVT 2491 + + R Q+LVVDVIK+ELG KTGMGKEETNDWVIRKT+GGPLRFRPKTREELQNELYRLE+K+RQAL++LK R RTGG GG+ TT ER+ LEGQ G + QAS T+EL+RLSEALEEVDALRVSVRSRDAALQAQAEA+DQLQLE R+LRGVQE+L RKERR R+LK+K+A LGEQHTALLED+EA QEQ+ HLKAQLALRKEE LAEADEFRE SLRQAEEV VLLKR XXXXXXXX A RQA++RAEAAEKSLQ + ++ R+RE+N+TM+AE+Q RLGKEA +AA G E R+ A XXXXXXXXXXXXXXXXXXXXXXXXX ++ LL GE ALLE E+K XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +D E D EA K+ +L ESEEIIEEME+ELREQA+ SA K ADDL KN+ALTAQL AA A LRP SAEE+E +L EL A KA+++A+Q+EC +L+LEL D KAS +LHKARVK LV K S ILD + +A A T Sbjct: 94 IRAMRTRLREQDLVVDVIKEELGLKTGMGKEETNDWVIRKTVGGPLRFRPKTREELQNELYRLERKYRQALDKLKTR-RTGGDRDEGGV-----VGTTEERSRVELEGQ-----------GXXXXDTDQQAS-TRELMRLSEALEEVDALRVSVRSRDAALQAQAEAIDQLQLEKRDLRGVQEKLGRKERRARELKRKHANLGEQHTALLEDFEASQEQVDHLKAQLALRKEEALAEADEFREQSLRQAEEVGVLLKREEELSTALEEEVASRXXXXXXXXHADRQAVARAEAAEKSLQVSVKQETRLREKNKTMMAELQ-RLGKEAGEAAXXXXXXXXXXXXXXXXXXXAEARQGRLEEARQKGATAXXXXXXXXXXXXXXXXXXXXXXXXXXEMKV--------------LL-------------------GEKLALLEAEKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGDKDTERDD----------------------------EAGKKFDLTESEEIIEEMESELREQADRVFSLEEEQQALKLQLESAKKAADDLSAKNAALTAQLKAAPATSPADPAAAVTAGAETEAEPASSRKLEESIPGSPRRP----LRPCSSAEEKEWQLGEELVAAKAAKKAAQNECVALKLELQDGKASGDLHKARVKALVADKDSFILDDAHGGGSGLEAAAPT 755
BLAST of mRNA_L-elsbetiae_contig80.16986.1 vs. uniprot
Match: A0A835YRR9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRR9_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 9.630e-16 Identity = 94/262 (35.88%), Postives = 122/262 (46.56%), Query Frame = 2 Query: 338 VHSGRLCFSAQELVVDVIKDELGNKTGMGKEETNDWVIRKTIGGPLRFRPKTREELQNELYRLEKKHRQALNRLKVRSRTGGGGIGLDAEPATTGERAPAPLEGQVDAGPEAALSEGVTPPQQEHQASGTKELVRLSEALEEVDALRVSV----------------------RSR------------DAALQAQAEAVDQLQLENRELRGVQERLARKERRVRDLKKKNAQLGEQHTALLEDYEAGQEQIHHLKAQLALRKE 1021 V + RL QELV DV+K E+ ++ ND VI KT GGP RFRPKTREELQNEL LEKKH +AL LK++ AP+ V GPE A+ E A +++ L E LEE LRV+V RSR D LQ QA +++L+ N EL ERL RR +DL+ KNA L E+ AL ++ E++HH + +LAL +E Sbjct: 42 VQALRLKVREQELVADVLKAEVATLRAWSPDQVNDLVIAKTCGGPKRFRPKTREELQNELSALEKKHVRAL--LKLKQAAEQXXXXXXXXXXXXXXXAPS-----VQEGPEVAVEEAP------RFAPSMEDVAALMEELEE---LRVAVKTGVSAPLHEYCNFKLYTACFARSRAKHKVAALFKAHDINLQHQATELERLRSHNSELVQEGERLGHAARRNKDLRGKNAALVERVEALAAAHDEALEELHHAQTRLALYEE 287
BLAST of mRNA_L-elsbetiae_contig80.16986.1 vs. uniprot
Match: A0A482SHG0_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SHG0_9ARCH) HSP 1 Score: 87.4 bits (215), Expect = 2.160e-15 Identity = 68/187 (36.36%), Postives = 99/187 (52.94%), Query Frame = 2 Query: 371 ELVVDVIKDELGNKTGMGKEETNDWVIRKTIGGPLRFRPKTREELQNELYRLEKKHRQALNRLKVRSRTGGGGIGLDAEPATTGERAPAPLEGQVDAGPEAALSEGVTPPQQEHQASGTKELVRLSEALEEVDALRVSVRSRDAALQAQAEAVDQLQLENRELRGVQERLARKERRVRDLKKKNAQL 931 EL+ DV+K+EL K M E+ N+++++KT+GGP RFRP TREEL+N++Y LEKK LN+ + T + AE T E A +G S V+ + S LV + LEE+ LR+ VR+RDA Q E + +L N EL QE ++ E+ + L+ KN+ L Sbjct: 81 ELINDVVKEELSRKGEMPLEQVNEYIMKKTLGGPKRFRPLTREELENKIYELEKK----LNKKVTTAPTSDVSNNV-AEAKRTDEDTTAQAKGS---------SRTVSNRYDAEKQSEMSSLVDAAALLEELQRLRIEVRARDAVADKQREEITRLLSRNAELVAAQEEVSYLEQEIGGLQDKNSLL 253
BLAST of mRNA_L-elsbetiae_contig80.16986.1 vs. uniprot
Match: A0A2D4C1R3_PYTIN (Aa_trans domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C1R3_PYTIN) HSP 1 Score: 88.2 bits (217), Expect = 4.130e-14 Identity = 83/255 (32.55%), Postives = 129/255 (50.59%), Query Frame = 2 Query: 266 NWLQEQILEGTFK*PLPQLGL*RCVHSGRLCFSAQELVVDVIKDELGNKTGM---GKEETNDWVIRKTIGGPLRFRPKTREELQNELYRLEKKHRQALNRLKVRSRTGGGGIGLDAEPATTGERAPAPLEGQVDAGPEAALSEGVTPP----QQEHQASGTKELVRLSEAL-EEVDALRVSVRSRDAALQAQAEAVDQLQLENRELRGVQERLARKERRVRDLKKKNAQLGEQHTALLEDYEAGQEQIHHLKAQL 1006 N LQEQI + K + + S R QEL++D++K L K +E ND++++K +G PLRFRPKTREEL+NEL L+ K+++A+ L+ + DA RAPA GQ E +P QQ Q +V +L EE+D L+V + S+ + QA+ + +L E +LR ++ERL RK++++ L+ K +QL + + LL + E E+ L+ QL Sbjct: 100 NQLQEQIQQ--LKTQDKEHRRSALIQSLRQSQREQELLIDILKQTLAEKVPEFQESRELVNDFILKKAVGAPLRFRPKTREELENELEVLDGKYKRAVENLQK--------VKEDAS------RAPATARGQRSIAESKRDDEDESPAIVSRQQASQQQPVAPVVITDPSLQEEIDRLKVELASKAMTIHTQADELHELMGELDKLRILEERLERKQQKITLLEDKVSQLQQDNVKLLHEKEVETEKNAELQEQL 338
BLAST of mRNA_L-elsbetiae_contig80.16986.1 vs. uniprot
Match: A0A8K1CM85_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CM85_PYTOL) HSP 1 Score: 77.4 bits (189), Expect = 4.990e-11 Identity = 76/291 (26.12%), Postives = 140/291 (48.11%), Query Frame = 2 Query: 266 NWLQEQILEGTFK*PLPQLGL*RCVHSGRLCFSAQELVVDVIKDELGNKTGM---GKEETNDWVIRKTIGGPLRFRPKTREELQNELYRLEKKHRQALNRLKVRSRTGGGGIGLDAEPATTGERA------PAPLE----GQVDAGPEAALSEGVTPPQQEHQASGTKELVRLSEALEEVDALRVSVRSRDAALQAQAEAVDQLQLENRELRGVQERLARKERRVRDLKKKNAQLGEQHTALLEDYEAGQEQIHHLKAQLALRKEEGLAEADEFREHSLRQAEEVSVLLKR 1099 N LQEQI T K + + + R QE+++D++K L +K +E N+++++K++GGP+RFRPK+REEL+NEL L+ K+++A+ LK PAT +R P E G VD ++ E KE+V EE+D L+V + S+ + +Q + +++L LR ++E++ RK+ ++ L++K + + + +L+ + E+ E+ ++ +L ++ + + LRQ E + L R Sbjct: 90 NQLQEQIQ--TLKSQDKEHRRSALIQNLRKSQREQEMLIDILKQTLLDKVPEFQESRELVNEYILKKSVGGPMRFRPKSREELENELEVLDNKYKRAVENLKKAKEA-------RPRPATETDRRNKRQQQPESDEEVEDGSVDVRSRVSIVE--------------KEVVTDPALQEEIDQLKVELASKTMTIHSQVDEINELYAXXERLRVLEEKVERKKEKIAVLEEKVSSMQLEQVSLVHEKESEMEKRLQVEEELQFVRDTRIEDVQTSDNERLRQLELIQSLRAR 357
BLAST of mRNA_L-elsbetiae_contig80.16986.1 vs. uniprot
Match: A0A1V9Z379_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z379_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 6.750e-11 Identity = 67/226 (29.65%), Postives = 115/226 (50.88%), Query Frame = 2 Query: 368 QELVVDVIKDELGNKTGMGKEE---TNDWVIRKTIGGPLRFRPKTREELQNELYRLEKKHRQALNRLKVRSRTGGGGIGLDAEPATTGERAPAPLEGQVDAGPEAALSEGVTPPQQEHQASGT-----KELVRLSEALEEVDALRVSVRSRDAALQAQAEAVDQLQLENRELRGVQERLARKERRVRDLKKKNAQLGEQHTALLEDYEAGQEQIHHLKAQLALRKE 1021 Q+L++DV+K+ L K ++ N+++++KT+GGP RFRPKTREEL+ E L+KK+++AL K+ A G+ A E PE S+ V + ASG +E ++ EEVD LR+++ S+D L AQ + ++ LQ + +L +Q++ R + + K+ +L E L+++ E E + +LA+ +E Sbjct: 112 QDLLIDVLKESLATKAPEFQDSIPLVNEFILKKTLGGPKRFRPKTREELELEFLELDKKYKRALQNAKL---------------AKQGQAAKKADEVPAQDDPETVESDVVD----QVIASGAEFKQFREYQEITALREEVDRLRITIASKDVNLNAQLQQIELLQQQVAQLLTIQDKFERTKAKYTASKEALEKLEEDAIRLVQEKEKESEARTQAEVELAMVRE 318
BLAST of mRNA_L-elsbetiae_contig80.16986.1 vs. uniprot
Match: A0A6G0XT65_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XT65_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 1.140e-10 Identity = 78/253 (30.83%), Postives = 125/253 (49.41%), Query Frame = 2 Query: 272 LQEQILEGTFK*PLPQLGL*RCVHSGRLCFSAQELVVDVIKDELGNKTGMGKEE---TNDWVIRKTIGGPLRFRPKTREELQNELYRLEKKHRQALNRLKVRSRTGGGGIGLDAEPATTGERAPAPLEGQVDAGPEAALSEGVTPPQQEHQASGTKELVRLSEALEEVDALRVSVRSRDAALQAQAEAVDQLQLENRELRGVQERLARKERRVRDLKKKNAQLGEQHTALLEDYEAGQEQIHHLKAQLALRKE 1021 LQEQ+ T K + + S R Q+L+VDV+K+ L K +++ N+++++KTI GP RFRPKTREEL+ E L+KK+++ L LK +++T ++ P SE TP A ELV + + LE LRV+ +++ ALQAQ + +D L+ EL V+++L R + + K+ +L + L++D E E+ L+A+LA KE Sbjct: 90 LQEQVA--TMKTQDKEHRRSALIQSLRKKQREQDLLVDVLKETLQAKVSEFQDDPNLVNEFILKKTISGPKRFRPKTREELELEFAELDKKYKRTLASLK-KAKT------------------------EMPQTPRIQESEERTP------AEPGPELVAMQKELE---TLRVAAAAKEIALQAQQDQIDGLRKRLEELHLVEDKLERTKTKYSASKEAIKKLQDDAIRLIQDKECESERRQQLEAELAFYKE 306
BLAST of mRNA_L-elsbetiae_contig80.16986.1 vs. uniprot
Match: A0A5D6Y320_9STRA (Aa_trans domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y320_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 3.400e-10 Identity = 70/203 (34.48%), Postives = 99/203 (48.77%), Query Frame = 2 Query: 338 VHSGRLCFSAQELVVDVIKDELGNKTG---MGKEETNDWVIRKTIGGPLRFRPKTREELQNELYRLEKKHRQALNRLKV----RSRTGGGGIGLDAEPATTGERAPAPLEGQVDAGPEAALSEGVTPPQQEHQASGTKELVRLSEALEEVDALRVSVRSRDAALQAQAEAVDQLQLENRELRGVQERLARKERRVRDLKKKNA 925 + R QELV DV+K L K + N +V +K +GGPLRFRPKTREEL++EL +L+ K+R+AL L+V R + G D+E R + + G E + V PP + EEV+ LR+ + S+ + AQA+ V L E LR V ++L RK+RRV L+ K A Sbjct: 106 IQGLRQSLREQELVADVLKQTLAEKLPEFRASRALVNAFVAQKCVGGPLRFRPKTREELESELEQLDTKYRKALGSLRVSATEREQRGAQAKDRDSEAKCRETRGGRAEDDALMLGEEESGDLCVPPPALQ----------------EEVERLRIELSSKAVTIHAQADEVALLYAEIDTLRVVHDKLERKKRRVALLEDKLA 292
BLAST of mRNA_L-elsbetiae_contig80.16986.1 vs. uniprot
Match: A0A1V9ZPT0_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZPT0_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 1.470e-9 Identity = 63/221 (28.51%), Postives = 112/221 (50.68%), Query Frame = 2 Query: 368 QELVVDVIKDELGNKTGMGKEE---TNDWVIRKTIGGPLRFRPKTREELQNELYRLEKKHRQALNRLKVRSRTGGGGIGLDAEPATTGERAPAPLEGQVDAGPEAALSEGVTPPQQEHQASGTKELVRLSEALEEVDALRVSVRSRDAALQAQAEAVDQLQLENRELRGVQERLARKERRVRDLKKKNAQLGEQHTALLEDYEAGQEQIHHLKAQLALRKE 1021 Q+L +DV+K+ L K +E N+++++KT+ GP RFRPKTREEL+ E L+KK+++A+ LK + TT E ++D ++ V P ++S + + L E E+D LR+++ S+D L +Q E + ++L+ +L +Q++ R +++ K+ +L E L+++ E E +AQL KE Sbjct: 37 QDLTIDVLKETLATKAPEFQESISMVNEFILKKTLSGPKRFRPKTREELELEFIELDKKYKRAITSLKQSK---------EVVQETTEEL------NEID-----NTTQDVVP-----ESSKDSDTIALEE---ELDRLRIAIASKDMNLNSQREQIKTMELQLEQLINMQDKCERSKKKYAACKEVVKKLEEDAMQLIQEKEKASEARAQAEAQLEFLKE 229
BLAST of mRNA_L-elsbetiae_contig80.16986.1 vs. uniprot
Match: A0A7S1UEG2_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UEG2_9STRA) HSP 1 Score: 72.8 bits (177), Expect = 2.070e-9 Identity = 84/274 (30.66%), Postives = 130/274 (47.45%), Query Frame = 2 Query: 368 QELVVDVIKDELGNKTGMGKEET-----NDWVIRKTIGGPLRFRPKTREELQNELYRLEK---KHRQALNRLKVRSRTGGG----------------GIGLDAEPATTGERAPAPLE-GQVDAGPEAALSEGVTPPQQEHQASGTKELVR-LSEALEEVDALRVSVRSRDAALQAQAEAVDQLQLENRELRGVQERLARKER-----------RVRDLKKKNAQL-GEQHTALLEDYEAGQEQIHHLKAQLALRKEEGLAEADEFREHSLRQAE 1075 QELVVDV+K+EL + + T N+WVI++T+GGP RFRPKTREELQNE+ L K K +NR K RT G EP + +RA A G D+G S+ + P ++VR S+ L+ ++ L V +R+++ + A+ L+ ENR+LR ++ R+E R +L++ QL ++ A++ E + +I H + LR E LA A+E + +R+ E Sbjct: 75 QELVVDVLKEELRRERNENDKPTSDYDMNEWVIQRTVGGPKRFRPKTREELQNEVEDLTKEKMKLTSRVNRQKKAGRTXXXXXXXXXXXXXXXXQQRGGDEPVEPGQSSKRAAASTSTGWDDSGLPTLTSQDMDP----------ADIVRERSDILQRLEDLTVELRTQEGLADSLAKETRTLRTENRDLRRAKDAAKRQENVIEALRLRLSERDTELERAGMQLMAKEEEAIVARSEVEESEIAHTRVVQQLRDELTLA-AEELSQMEMREVE 337 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig80.16986.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig80.16986.1 >prot_L-elsbetiae_contig80.16986.1 ID=prot_L-elsbetiae_contig80.16986.1|Name=mRNA_L-elsbetiae_contig80.16986.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=691bp MGKEETNDWVIRKTIGGPLRFRPKTREELQNELYRLEKKHRQALNRLKVRback to top mRNA from alignment at L-elsbetiae_contig80:33952..55336- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig80.16986.1 ID=mRNA_L-elsbetiae_contig80.16986.1|Name=mRNA_L-elsbetiae_contig80.16986.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=21385bp|location=Sequence derived from alignment at L-elsbetiae_contig80:33952..55336- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig80:33952..55336- >mRNA_L-elsbetiae_contig80.16986.1 ID=mRNA_L-elsbetiae_contig80.16986.1|Name=mRNA_L-elsbetiae_contig80.16986.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=4146bp|location=Sequence derived from alignment at L-elsbetiae_contig80:33952..55336- (Laminarionema elsbetiae ELsaHSoW15)back to top |