mRNA_L-elsbetiae_contig80.16985.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig80.16985.1 vs. uniprot
Match: D8LMA0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMA0_ECTSI) HSP 1 Score: 167 bits (424), Expect = 1.850e-46 Identity = 96/112 (85.71%), Postives = 102/112 (91.07%), Query Frame = 1 Query: 61 QGRLLAMQQRKRHADHDALLLQNRINLLRKEEAKAWKKIETAKHRSEEILRLREQNEKRVVERISAAERQA---RLQKQKNHAVEEMARQNRIRIYHELSAARKSGVAQVRQ 387 QGRLLAMQQRKRHADHDALLLQNRI+LLRKEEAKAWKKIET K RSEEILRLREQNE+RVVERISAAERQA +LQ Q+N AVEE AR NRIRIYHEL+AARK+ VAQVRQ Sbjct: 4 QGRLLAMQQRKRHADHDALLLQNRISLLRKEEAKAWKKIETTKQRSEEILRLREQNERRVVERISAAERQADNCKLQNQRNQAVEETARLNRIRIYHELAAARKNSVAQVRQ 115
BLAST of mRNA_L-elsbetiae_contig80.16985.1 vs. uniprot
Match: A0A7S3XZU6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZU6_HETAK) HSP 1 Score: 106 bits (265), Expect = 3.090e-24 Identity = 84/239 (35.15%), Postives = 112/239 (46.86%), Query Frame = 1 Query: 7 SVNGAAAP----TPLPSETFPYQGRLLAMQQRKRHADHDALLLQNRINLLRKEEAKAWKKIETAKHRSEEILRLREQNEKRVVERISAAERQARLQKQ---KNHAVEEMARQNRIRIYHELSAARKSGVAQVRQQKQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKELSLIQQLKSTQALQQRAYQELETALGD 702 + NG++A LPSE + Y G+LL+ QQRK+ A HDA LL NRI LL+KEE +AW+KI K+R++EIL+LRE NEKR+ ER+ AA +Q+Q +N EE+AR+NR + + +K V VRQ+KQ E+ LIQ+LKSTQ LQQ AY ELE AL + Sbjct: 2 NANGSSASLQMNAALPSEVYNYNGKLLSAQQRKKQAKHDAQLLANRIALLQKEEERAWRKIHQTKNRAQEILKLREDNEKRMEERMQAAMHANSIQQQLAEQNKVNEELARRNRAQQVERMFKEKKEKVQAVRQEKQLMRRELLGMRESDVVQNRRRREEVLAQEQQLREMRERERALKLEQNKKNYEEKVKNEHQESKAKEKEVEQLERVEMELIQKLKSTQLLQQNAYSELENALNE 240
BLAST of mRNA_L-elsbetiae_contig80.16985.1 vs. uniprot
Match: A0A7S2SFR2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SFR2_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 1.810e-11 Identity = 34/70 (48.57%), Postives = 52/70 (74.29%), Query Frame = 1 Query: 22 AAPTPLPSETFPYQGRLLAMQQRKRHADHDALLLQNRINLLRKEEAKAWKKIETAKHRSEEILRLREQNE 231 A+P+PLPSE + G+LL+ R++H + DA LL NRI LL+KEE +AW+KI+ K R+++I+ LR ++E Sbjct: 3 ASPSPLPSERAEFSGKLLSAAHRQKHVESDAQLLANRIALLKKEEQRAWRKIQQTKKRADDIVHLRREHE 72
BLAST of mRNA_L-elsbetiae_contig80.16985.1 vs. uniprot
Match: A0A7S2SFQ0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SFQ0_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 1.020e-10 Identity = 34/70 (48.57%), Postives = 52/70 (74.29%), Query Frame = 1 Query: 22 AAPTPLPSETFPYQGRLLAMQQRKRHADHDALLLQNRINLLRKEEAKAWKKIETAKHRSEEILRLREQNE 231 A+P+PLPSE + G+LL+ R++H + DA LL NRI LL+KEE +AW+KI+ K R+++I+ LR ++E Sbjct: 3 ASPSPLPSERAEFSGKLLSAAHRQKHVESDAQLLANRIALLKKEEQRAWRKIQQTKKRADDIVHLRREHE 72
BLAST of mRNA_L-elsbetiae_contig80.16985.1 vs. uniprot
Match: A0A8J2SHM4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SHM4_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 2.170e-10 Identity = 64/238 (26.89%), Postives = 107/238 (44.96%), Query Frame = 1 Query: 43 SETFPYQGRLLAMQQRKRHADHDALLLQNRINLLRKEEAKAWKKIETAKHRSEEILRLREQNEKRVVERISAA---ERQARLQKQKNHAVEEMARQNRIRIYHELSAARKSGVAQVRQQKQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKELSLIQQLKSTQALQQRAYQELETAL-GDSRAM--VAKPFPIE 738 +E ++ ++L ++Q+K+ A+HD LL NRI LL+KEE KA+KKIE K R++E+L +R ++E+ ER++ ER+ +L+ + N A E AR+NR + + + V + R + Q +E+ LIQ+LK TQ +QQ+A+++LE AL GD + V +P P++ Sbjct: 7 TEQSDFESKMLLVKQKKKQAEHDKRLLVNRIALLKKEERKAYKKIEKTKERAQEVLTVRIEHERHHSERVARHARNERRRKLEAEANKASEAEARRNRQLAMQHVQQLKFAKVREARSEAAQARDEIRAEQLADVVEKQRKRAEVKEHEAKLRERKQQEMQGILKRNRKAYERKVKEEEKATLLREKEVARMEREEMKLIQKLKKTQVMQQQAFEDLENALNGDLSHLTQVEEPSPVK 244
BLAST of mRNA_L-elsbetiae_contig80.16985.1 vs. uniprot
Match: A0A3F2RWT2_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RWT2_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 6.950e-10 Identity = 60/222 (27.03%), Postives = 100/222 (45.05%), Query Frame = 1 Query: 61 QGRLLAMQQRKRHADHDALLLQNRINLLRKEEAKAWKKIETAKHRSEEILRLREQNEK-----RVVERISAAERQARLQKQKNHAVEEMARQNRIRIYHELSAARKSGVAQVRQQKQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKELSLIQQLKSTQALQQRAYQELETALGDSRA 711 + RLL +QR++ DALLL+NRI LL+ EE KAWKKIE + R+ E+L++R+ N++ R + E+QA +Q +++ + + + I H+L+ AR+S Q++++KQ+ +EL LIQ+L++TQ LQ++A++ELE AL + A Sbjct: 9 KSRLLEAKQRRQEVSKDALLLKNRIALLKAEEEKAWKKIEQTRRRATELLKVRQDNDRAHTTLRELALEIEREKQASIQVKRDLVLSIDSIPKKKEISHQLTEARRSEAQQLKEEKQRWKEITDRQKRDELQDAIRRKEEIEGQKEALRMKKMLHKQDIDKHNRERALEKVRAEEDQARQHEAEVQEMERQELELIQRLRNTQHLQKQAFEELEAALSGNAA 230
BLAST of mRNA_L-elsbetiae_contig80.16985.1 vs. uniprot
Match: A0A8K1FJT7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FJT7_PYTOL) HSP 1 Score: 67.0 bits (162), Expect = 1.410e-9 Identity = 67/227 (29.52%), Postives = 110/227 (48.46%), Query Frame = 1 Query: 61 QGRLLAMQQRKRHADHDALLLQNRINLLRKEEAKAWKKIETAKHRSEEILRLREQNEK-----RVVERISAAERQARLQKQKNHAVEEMARQNRIRIYHELSAARKSGVAQVRQQKQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKELSLIQQLKSTQALQQRAYQELETALGDSRAMVAKP 726 + RL+ +Q+++ A DALLL+NRI LL+ EE KAWKKIE + R+ E+ +LRE N++ R + +++ E QA +Q ++ + Q + + +++ AR+ Q++++KQ+ XXXX XXXXX EL LIQ+L++TQ LQ++A++ELE AL + + V+ P Sbjct: 6 KSRLIEAKQKRQEASKDALLLRNRIALLKAEEEKAWKKIEQTRKRAAELTKLREDNDRSQAGLRELAQVAERELQASIQAKRELVQSIDSLQKKKEVADQITEARRHEAQQLKEEKQKWREITXXXXREELLEAIXXXXXIVLQKEMLKTKKMLQKQEIEKITKERAQEKLRIEEENTRKHENEVQEMERLELELIQRLRNTQHLQKQAFEELEAALSGTASCVSSP 232
BLAST of mRNA_L-elsbetiae_contig80.16985.1 vs. uniprot
Match: A0A5D6XXV4_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XXV4_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 3.640e-9 Identity = 61/227 (26.87%), Postives = 102/227 (44.93%), Query Frame = 1 Query: 61 QGRLLAMQQRKRHADHDALLLQNRINLLRKEEAKAWKKIETAKHRSEEILRLREQNEK-----RVVERISAAERQARLQKQKNHAVEEMARQNRIRIYHELSAARKSGVAQVRQQKQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKELSLIQQLKSTQALQQRAYQELETALGDSRAMVAKP 726 + +L+ +QR++ A DALLL+NRI LL+ EE KAWKKIE + R+ E+LR+RE N++ R + +++ E QA + ++ + + Q + + +L+ AR+S Q++++KQ+ EL LIQ+L++TQ LQ++A++ELE AL S A + P Sbjct: 5 KSKLVEAKQRRQEASKDALLLRNRIALLKAEEEKAWKKIEQTRKRAAELLRVRESNDRSHAELRDLAQLAELELQASISAKRELVLSIDSVQKKKELGLQLTEARRSEALQLKEEKQRWKESADKQRQDELLDAIRRKDEVATQKEALRAKKLLLRHEAEKLSKARASEKVRAEEELTRQREAEVHAMERLELELIQRLRNTQHLQKQAFEELEAALTGSGAGLHSP 231
BLAST of mRNA_L-elsbetiae_contig80.16985.1 vs. uniprot
Match: A0A2P4YI85_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YI85_9STRA) HSP 1 Score: 60.8 bits (146), Expect = 1.540e-8 Identity = 31/56 (55.36%), Postives = 42/56 (75.00%), Query Frame = 1 Query: 61 QGRLLAMQQRKRHADHDALLLQNRINLLRKEEAKAWKKIETAKHRSEEILRLREQN 228 + RL+ +QR++ A DALLL+NRI LL+ EE KAWKKIE + R+ E+L+LRE N Sbjct: 9 KSRLIEAKQRRQEASKDALLLRNRIALLKSEEEKAWKKIEQTRRRAAELLKLREDN 64
BLAST of mRNA_L-elsbetiae_contig80.16985.1 vs. uniprot
Match: A0A2P4YD48_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YD48_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 2.260e-8 Identity = 62/228 (27.19%), Postives = 99/228 (43.42%), Query Frame = 1 Query: 61 QGRLLAMQQRKRHADHDALLLQNRINLLRKEEAKAWKKIETAKHRSEEILRLREQNEKR---VVERISAAERQARLQKQKNH----AVEEMARQNRIRIYHELSAARKSGVAQVRQQKQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKELSLIQQLKSTQALQQRAYQELETALGDSRAMVAK 723 + RL+ +QR++ A DALLL+NRI LL+ EE KAWKKIE + R+ E+L+LRE N + + E ER+ +L Q +++ + ++ I + +L+ AR+S Q+++ KQ+ +EL LIQ+L++TQ LQ++A++ELE AL AK Sbjct: 9 KSRLIEAKQRRQEASKDALLLRNRIALLKSEEEKAWKKIEQTRRRAAELLKLREDNGRAHAMLKELAMEMERENQLSIQAKRELVLSIDSIPKKKEISM--QLTEARRSEAQQLKEDKQRWKEIMDQQKRDEMNDAIRRKEEIISQKEALRAKKIMHQQDIDKVNRERTMEKIRAEEDQARRHEVEVQEMERQELELIQRLRNTQHLQKQAFEELEAALSGGNGANAK 234 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig80.16985.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig80.16985.1 >prot_L-elsbetiae_contig80.16985.1 ID=prot_L-elsbetiae_contig80.16985.1|Name=mRNA_L-elsbetiae_contig80.16985.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=256bp MSSVNGAAAPTPLPSETFPYQGRLLAMQQRKRHADHDALLLQNRINLLRKback to top mRNA from alignment at L-elsbetiae_contig80:24550..30351+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig80.16985.1 ID=mRNA_L-elsbetiae_contig80.16985.1|Name=mRNA_L-elsbetiae_contig80.16985.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5802bp|location=Sequence derived from alignment at L-elsbetiae_contig80:24550..30351+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig80:24550..30351+ >mRNA_L-elsbetiae_contig80.16985.1 ID=mRNA_L-elsbetiae_contig80.16985.1|Name=mRNA_L-elsbetiae_contig80.16985.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1536bp|location=Sequence derived from alignment at L-elsbetiae_contig80:24550..30351+ (Laminarionema elsbetiae ELsaHSoW15)back to top |