mRNA_L-elsbetiae_contig80.16984.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig80.16984.1 vs. uniprot
Match: A0A6H5JTQ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTQ1_9PHAE) HSP 1 Score: 269 bits (688), Expect = 7.630e-77 Identity = 137/172 (79.65%), Postives = 149/172 (86.63%), Query Frame = 1 Query: 61 CSQVYLRRVTGEEDLGAVRSLVLNVDTNGTQVDHLGTLMPLLSELRLERGSTLASFRDLGSSLANLRVVWLCACGIRHLDGVGALSSLEELYLAFNDVEDLTSIALHDRLEVLDLESNSVGDAEQAIQLGTCPRLWSLTLTANPVCRGRFYRRMIVDAVPQLASLDEEDIAD 576 CS+ LR +TGEEDL VR L L VDTN TQVDHLG ++PLLSELRLERGS LASFRDLGSSL NLRV+WL ACG+RHLDGVGAL+ LEELYLAFNDVEDLTSIALHDRLEVLDLESN V DAEQAI LGTC LWSLTLTANPVCR YRR +V+AVPQLASLDE+D++D Sbjct: 20 CSEASLRIITGEEDLRDVRHLALAVDTNTTQVDHLGIVLPLLSELRLERGSVLASFRDLGSSLPNLRVLWLSACGVRHLDGVGALTGLEELYLAFNDVEDLTSIALHDRLEVLDLESNCVKDAEQAIHLGTCSHLWSLTLTANPVCRDLHYRRRMVEAVPQLASLDEKDVSD 191
BLAST of mRNA_L-elsbetiae_contig80.16984.1 vs. uniprot
Match: D8LM99_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM99_ECTSI) HSP 1 Score: 269 bits (688), Expect = 8.760e-77 Identity = 138/179 (77.09%), Postives = 154/179 (86.03%), Query Frame = 1 Query: 49 VDEP---CSQVYLRRVTGEEDLGAVRSLVLNVDTNGTQVDHLGTLMPLLSELRLERGSTLASFRDLGSSLANLRVVWLCACGIRHLDGVGALSSLEELYLAFNDVEDLTSIALHDRLEVLDLESNSVGDAEQAIQLGTCPRLWSLTLTANPVCRGRFYRRMIVDAVPQLASLDEEDIAD 576 V+EP CS+ LRR+TGEEDL VR L L VDT TQVDHLGT++PLL+ELRLERGS LASFRDLGSSL NLRV+WL ACG+ HLDGVGAL+ LEELYLAFNDVEDLTSIALHDRLEVLDLESN + DAEQAI LGTC RLWSLTLTANP+CR YRR +V+AVPQLASLDE+D++D Sbjct: 13 VEEPGDECSEASLRRITGEEDLRDVRHLALAVDTKTTQVDHLGTVLPLLTELRLERGSVLASFRDLGSSLPNLRVLWLSACGVCHLDGVGALTGLEELYLAFNDVEDLTSIALHDRLEVLDLESNCLKDAEQAIHLGTCSRLWSLTLTANPLCRDHNYRRRMVEAVPQLASLDEKDVSD 191
BLAST of mRNA_L-elsbetiae_contig80.16984.1 vs. uniprot
Match: A0A5D6YP06_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YP06_9STRA) HSP 1 Score: 162 bits (410), Expect = 1.940e-39 Identity = 81/187 (43.32%), Postives = 128/187 (68.45%), Query Frame = 1 Query: 37 EKQLVDEPCSQVY---LRRVTGEEDLGAVRSLVLNVDTNGTQVDHLGTLMPLLSELRLERGSTLASFRDLGSSLANLRVVWLCACGIRHLDGVGALSSLEELYLAFNDVEDLTSIALHDRLEVLDLESNSVGDAEQAIQLGTCPRLWSLTLTANPVCRGRFYRRMIVDAVPQLASLDEEDIADGDRC 588 ++ L D P + L++++G++DL V L ++VD+ V+ +G L+P L +L+L+ STL SFRDLG+SL +L+++W+ GI LDG+GAL+ L+ELYL +ND+ DL+ + LH+ ++V+DLE N + D Q QL C +L +L L ANPVCR YR++I + +PQL +LD++ +ADG+R Sbjct: 88 DEHLPDNPFDDITEDKLQKLSGKQDLARVTYLQISVDSGKQSVEAIGELLPSLQQLKLQN-STLHSFRDLGTSLHSLQILWVIRSGISDLDGIGALTGLQELYLQYNDISDLSPLTLHEEIQVIDLEGNCIEDIGQVEQLAFCAQLTTLNLEANPVCRIAHYRQIIANFLPQLTTLDDKPVADGERA 273
BLAST of mRNA_L-elsbetiae_contig80.16984.1 vs. uniprot
Match: A0A7S2GID5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GID5_9STRA) HSP 1 Score: 144 bits (362), Expect = 3.490e-37 Identity = 77/162 (47.53%), Postives = 108/162 (66.67%), Query Frame = 1 Query: 91 GEEDLGAVRSLVLNVDT-NGTQVDHLGTLMPLLSELRLERGSTLASFRDLGSSLANLRVVWLCACGIRHLDGVGALSSLEELYLAFNDVEDLTSIALHDRLEVLDLESNSVGDAEQAIQLGTCPRLWSLTLTANPVCRGRF-----YRRMIVDAVPQLASLD 558 G + G + +L L ++T + +D LG +P L+ L L R S+LAS RDLG+SLANL+V+ CG++ LDG+GAL+++EELYL+FND+ DLT IA+H ++VLDLESN + Q QL +C +LWSLTLT NP+ R YR+ + VP L +LD Sbjct: 16 GVDSKGLITNLTLTINTKHDGPIDELGQFLPQLAHLHL-RSSSLASIRDLGTSLANLKVLNASRCGLKELDGIGALTAMEELYLSFNDIWDLTPIAMHGHVQVLDLESNCIDQTLQLRQLASCAKLWSLTLTGNPIERRHSNNLAAYRQAVCQNVPSLEALD 176
BLAST of mRNA_L-elsbetiae_contig80.16984.1 vs. uniprot
Match: W4G0V7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G0V7_9STRA) HSP 1 Score: 152 bits (385), Expect = 2.700e-36 Identity = 82/170 (48.24%), Postives = 113/170 (66.47%), Query Frame = 1 Query: 76 LRRVTGEEDLGAVRSLVLNVDTNGTQVDHLGTLMPLLSELRLERGSTLASFRDLGSSLANLRVVWLCACGIRHLDGVGALSSLEELYLAFNDVEDLTSIALHDRLEVLDLESNSVGDAEQAIQLGTCPRLWSLTLTANPVCRGRFYRRMIVDAVPQLASLDEEDIADGDR 585 LR+++G++DL V L L VDT+ V+ LG L+P LS+LRL + S L SFRDLG+SL L+++WL + G++ LDG+GAL+ L ELYL FND+ D++ ++LHD L +LDL+ N V D Q QLG C +L L L ANPV YR + +PQL +LD +A DR Sbjct: 69 LRQISGKQDLNRVTYLQLTVDTHKQSVEALGELLPSLSQLRLHQ-SVLHSFRDLGTSLHGLQILWLMSSGVKDLDGIGALTGLRELYLQFNDIVDVSPLSLHDELHILDLQGNRVQDIVQIEQLGMCVQLTVLNLAANPVAAIPNYRPIACSYIPQLQTLDTAPVAPCDR 237
BLAST of mRNA_L-elsbetiae_contig80.16984.1 vs. uniprot
Match: A0A1V9ZB88_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZB88_9STRA) HSP 1 Score: 152 bits (384), Expect = 3.060e-36 Identity = 82/172 (47.67%), Postives = 114/172 (66.28%), Query Frame = 1 Query: 76 LRRVTGEEDLGAVRSLVLNVDTNGTQVDHLGTLMPLLSELRLERGSTLASFRDLGSSLANLRVVWLCACGIRHLDGVGALSSLEELYLAFNDVEDLTSIALHDRLEVLDLESNSVGDAEQAIQLGTCPRLWSLTLTANPVCRGRFYRRMIVDAVPQLASLDEEDIADGDRCP 591 LR+++G++DL V L L VDT V+ LG L+P L +LRL S L SFRDLG+SL +L+V+WL +CG+ LDG+GAL+ L ELYL N + D++ +++HD L V+DLE N+V D Q QLG CP+L +L L NPV YR ++ +P LASLD++ + DR P Sbjct: 74 LRQLSGKQDLTKVTFLQLTVDTAKQSVEALGELLPSLLQLRLHE-SHLHSFRDLGTSLHSLQVLWLQSCGVTDLDGIGALTGLRELYLQHNAIADISPLSMHDELAVVDLEGNAVLDIVQIEQLGLCPQLSALKLQGNPVAAIPQYRSIVASYIPHLASLDDKPVTAADRTP 244
BLAST of mRNA_L-elsbetiae_contig80.16984.1 vs. uniprot
Match: A0A7S1XUL6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XUL6_9STRA) HSP 1 Score: 150 bits (378), Expect = 8.180e-36 Identity = 83/182 (45.60%), Postives = 111/182 (60.99%), Query Frame = 1 Query: 49 VDEPCSQVYLRRVTGEEDLGAVRSLVLNVDTNGTQVDHLGTLMPLLSELRLERGSTLASFRDLGSSLANLRVVWLCACGIRHLDGVGALSSLEELYLAFNDVEDLTSIALHDRLEVLDLESNSVGDAEQAIQLGTCPRLWSLTLTANPVCRGRFYRRMIVDAVPQLASLDEEDIADGDRCPP 594 +D SQ L+ +TG +DL V SL ++VD + Q+D +G +P L LR ST+++FRDLG+SL NL V+W G+ LDG+ A+ LEELY+AFNDV D +IA HD L V+DLE N V D Q L TCP+L SL+L P+ YRR I +P+L LDE + D+ PP Sbjct: 250 IDHKLSQKSLQDITGCDDLDVVTSLSISVDASDCQLDLIGHWLPNLERLRF-LSSTISTFRDLGTSLRNLVVLWAPRAGVAELDGLSAMPCLEELYVAFNDVWDCNAIAFHDSLSVVDLEGNCVDDLTQVKLLSTCPKLSSLSLDGCPISSHPEYRRHICSVLPELTFLDETSVTGSDQQPP 430
BLAST of mRNA_L-elsbetiae_contig80.16984.1 vs. uniprot
Match: T0SCL0_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0SCL0_SAPDV) HSP 1 Score: 149 bits (376), Expect = 3.480e-35 Identity = 79/172 (45.93%), Postives = 113/172 (65.70%), Query Frame = 1 Query: 76 LRRVTGEEDLGAVRSLVLNVDTNGTQVDHLGTLMPLLSELRLERGSTLASFRDLGSSLANLRVVWLCACGIRHLDGVGALSSLEELYLAFNDVEDLTSIALHDRLEVLDLESNSVGDAEQAIQLGTCPRLWSLTLTANPVCRGRFYRRMIVDAVPQLASLDEEDIADGDRCP 591 LR+++G+ DL V L L++DT V+ LG L+P L +LRL S L SFRDLG+SL +L+V+WL CG+ LDG+GAL+ L ELYL N + D++ +++HD L V+DL+ N+V D Q QLG CP+L +L L NPV YR +++ +P L +LD++ I DR P Sbjct: 72 LRQLSGKSDLTKVTFLQLSIDTGKQSVEALGELLPSLLQLRLHE-SKLHSFRDLGTSLHSLQVLWLERCGVTDLDGIGALTGLRELYLNGNCISDISPLSMHDELSVVDLQGNAVMDIVQIEQLGLCPQLTALKLVENPVASIPQYRAIVISYIPHLTALDDKPITAADRTP 242
BLAST of mRNA_L-elsbetiae_contig80.16984.1 vs. uniprot
Match: A0A485KIX1_9STRA (Aste57867_7880 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KIX1_9STRA) HSP 1 Score: 147 bits (372), Expect = 1.100e-34 Identity = 92/230 (40.00%), Postives = 129/230 (56.09%), Query Frame = 1 Query: 76 LRRVTGEEDLGAVRSLVLNVDTNGTQVDHLGTLMPLLSELRLERGSTLASFRDLGSSLANLRVVWLCACGIRHLDGVGALSSLEELYLAFNDVEDLTSIALHDRLEVLDLESNSVGDAEQAIQLGT-------------CPRLWSLTLTANPVCRGRFYRRMIVDAVPQLASLDEEDIADGDRCPPPTELEESNDQLLGDIQQASPTKYPLPRHHYRSPVNSPVKQAASP 726 LR+++G++DL V L L VDT V+ LG L+P +++LRL + S L SFRDLG+SL L+V+WL G++ LDG+GAL+ L ELYL FN++ D++ +++HD L V+DL+ N V D Q QLG CP L SL L NPV YR ++ +P L LDE +AD D+ T++ I QA K+P S V+ +K A SP Sbjct: 66 LRQISGKQDLNKVNYLQLTVDTQKQSVEALGELLPSMTQLRLHQ-SILHSFRDLGTSLHGLQVLWLMRSGVKDLDGIGALTGLRELYLQFNEIADISPLSMHDELHVIDLQGNCVEDIVQLEQLGRSIQVLSTNYHSGLCPHLASLNLADNPVASIPQYRPIVCSYIPHLEKLDERAVADADKMTITTDM----------IDQALRFKHPSKLKREESLVDG-IKVAESP 283
BLAST of mRNA_L-elsbetiae_contig80.16984.1 vs. uniprot
Match: A0A7S3BZ52_9VIRI (Hypothetical protein (Fragment) n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3BZ52_9VIRI) HSP 1 Score: 139 bits (350), Expect = 1.340e-34 Identity = 76/172 (44.19%), Postives = 107/172 (62.21%), Query Frame = 1 Query: 76 LRRVTGEEDLGAVRSLVLNVDTNGTQVDHLGTLMPLLSELRLERGSTLASFRDLGSSLANLRVVWLCACGIRHLDGVGALSSLEELYLAFNDVEDLTSIALHDRLEVLDLESNSVGDAEQAIQLGTCPRLWSLTLTANPVCRGRFYRRMIVDAVPQLASLDEEDIADGDRCP 591 LR ++G+EDL V L L VD ++ +G ++P L EL+L GS+LA+ RDLG+ L LRV+W+ C + HLDG+GAL +L ELY +FND+ D+ +A + L LDLE N V +A+Q L C L +LTL NPV + YR + VPQL +D+E + + DR P Sbjct: 2 LRLLSGKEDLQGVSYLELAVDAEQMPINEMGAMLPSLRELKLT-GSSLATLRDLGTQLTALRVLWIGRCAVAHLDGLGALPALRELYASFNDIADVGGVAELEELHTLDLEGNRV-EADQLEWLAACASLRALTLEGNPVAVRQDYRSAVAGTVPQLEYIDDEPVTEADRHP 171 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig80.16984.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig80.16984.1 >prot_L-elsbetiae_contig80.16984.1 ID=prot_L-elsbetiae_contig80.16984.1|Name=mRNA_L-elsbetiae_contig80.16984.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=474bp QEGRDRLGIEFEEKQLVDEPCSQVYLRRVTGEEDLGAVRSLVLNVDTNGTback to top mRNA from alignment at L-elsbetiae_contig80:18912..21449- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig80.16984.1 ID=mRNA_L-elsbetiae_contig80.16984.1|Name=mRNA_L-elsbetiae_contig80.16984.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2538bp|location=Sequence derived from alignment at L-elsbetiae_contig80:18912..21449- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig80:18912..21449- >mRNA_L-elsbetiae_contig80.16984.1 ID=mRNA_L-elsbetiae_contig80.16984.1|Name=mRNA_L-elsbetiae_contig80.16984.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2844bp|location=Sequence derived from alignment at L-elsbetiae_contig80:18912..21449- (Laminarionema elsbetiae ELsaHSoW15)back to top |