mRNA_L-elsbetiae_contig7995.16967.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7995.16967.1 vs. uniprot
Match: A0A6H5KIB1_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIB1_9PHAE) HSP 1 Score: 724 bits (1870), Expect = 7.140e-229 Identity = 378/580 (65.17%), Postives = 446/580 (76.90%), Query Frame = 2 Query: 215 RRRAERGPRPFVPFLKSPPVLACDSAEGIVDGHDRPHMLDDIQHPSVQHKCLSDFQAHMVNSIRSTPCVVCDRLCKRADIKLMAAKELPHPHLLKATDKLLNCRDVRSTFFDYPGDDGEPKCLDGLVLERVAFEQQPPHRLQVCKECLGDLSKERIPEAALANGLWLGDLPERLRDATFVELLAASPVRMSGMVLALDKLKVGNVAGSAKPVMRGTFTFYMQDAYGVQQRLPACDTDLAGSFTIALVGARPTHAQLRRLLGARRDMVLALLEYLLDKDNRLVGEHKLARQAIMSPENLDRYSDDGAVPQAILDAIISVKDPTGSYADARSTHAHGNRETETPLNTEDGGAVVDDDGSPLPPFIINTNAVVDTGDDGAVASSTMPRRLRRLGATLADGEPSLAQETAAEAA--VRAGRPSPIGTDKALVLTHSGKFVSDFYDPGLFAAAFFTLFPHGVGGHLDDRPRFLPLKKWAQILLRRRDPRFRKHRTFLFCVCALIFRREAMANTHFKLSGRVSPQLASLLSSVTPEDLSTAAAEMEGRASRASTLRDREGIRA*--SVFTCSSFSPWTT*TSRPTR 1942 +RRAERGPR F P +KSPP+LACD +G +DG+D+P MLDDI HPS HKC+ DF MVNSI ST C VCD L + DI L+AA +L H LLKA+DK+L C VR FF YPG D + KCLDGLVLER+ FE PPHRL+VC EC DLS+ R+PEAALANGLWLG+ PE LR A+FVEL+AASPVR+SG+VLALD+LKVGN+AGSAK +MR TFTFYMQDAYGVQ +LPACD D+AGS TI LVGA T AQLRRLLGARR M+ L +LLDKDN LVGEH LARQA SPENL +S +G VP+AILD+I++V+D TGSYA+ARSTHAH NRE E P NT+ G ++ DD P P ++ NAV+DTG+D AVA S+ P RLR LG+++ G+PSLAQ+ AAEAA VRAGRPSP+GTDKA+VLTHSGK VSDF +PGLF AAF+ LFPHGVGG LD R R L K+WA+ILL+RRDPRFRKHRTFLFCVCALIFRREA+ N FKL G +S ++ASLL+ VTP DLS AAAEMEG +S EGIR+ + + SS + WT R TR Sbjct: 124 KRRAERGPRDFTPIVKSPPILACDDEQGRIDGNDQPFMLDDILHPSRVHKCIHDFCTFMVNSIESTSCAVCDVLHREIDINLIAATDLRHADLLKASDKMLGCAGVRDRFFGYPGGD-DSKCLDGLVLERLGFEADPPHRLRVCAECFRDLSRNRMPEAALANGLWLGEFPEHLRSASFVELIAASPVRVSGIVLALDELKVGNIAGSAKSLMRSTFTFYMQDAYGVQLKLPACDADIAGSITIVLVGANATPAQLRRLLGARRSMIEDLNTFLLDKDNALVGEHTLARQAQQSPENLATFSVNGDVPKAILDSIVAVQDKTGSYANARSTHAHENREPEVPANTDRAGGILRDDTLPTAPMVVEINAVMDTGEDRAVAESSKPARLRGLGSSMCSGDPSLAQQAAAEAAAAVRAGRPSPLGTDKAMVLTHSGKLVSDFSEPGLFIAAFYDLFPHGVGGPLDKRRRSLTFKRWARILLKRRDPRFRKHRTFLFCVCALIFRREAIENARFKLRGNISTRIASLLAKVTPADLSQAAAEMEGSFDFSSL---NEGIRSLIRMMESVSSGASWTIHNKRCTR 699
BLAST of mRNA_L-elsbetiae_contig7995.16967.1 vs. uniprot
Match: A0A6H5L0L4_9PHAE (Helitron_like_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0L4_9PHAE) HSP 1 Score: 655 bits (1690), Expect = 2.920e-209 Identity = 348/571 (60.95%), Postives = 414/571 (72.50%), Query Frame = 2 Query: 221 RAERGPRPFVPFLKSPPVLACDSAEGIVDGHDRPHMLDDIQHPSVQHKCLSDFQAHMVNSIRSTPCVVCDRLCKRADIKLMAAKELPHPHLLKATDKLLNCRDVRSTFFDYPGDDGEPKCLDGLVLERVAFEQQPPHRLQVCKECLGDLSKERIPEAALANGLWLGDLPERLRDATFVELLAASPVRMSGMVLALDKLKVGNVAGSAKPVMRGTFTFYMQDAYGVQQRLPACDTDLAGSFTIALVGARPTHAQLRRLLGARRDMVLALLEYLLDKDNRLVGEHKLARQAIMSPENLDRYSDDGAVPQAILDAIISVKDPTGSYADARSTHAHGNRETETPLNTEDGGAV------VDDDGSPLPPFIINTNAVVDTGDDGAVASSTMPRRLRRLG-------------ATLADGEPSLAQETAAEAAVRAGRPSPIGTDKALVLTHSGKFVSDFYDPGLFAAAFFTLFPHGVGGHLDDRPRFLPLKKWAQILLRRRDPRFRKHRTFLFCVCALIFRREAMANTHFKLSGRVSPQLASLLSSVTPEDLSTAAAEMEGRASRASTLRDREGIR 1876 RA R P F P +K P+LA + ++G +DGHD PH+LDDI HPSV HKCL+DF MVNSIR T C VCDR C++ KL+A K+LPH +LL A + LLNC VR FF+YPGD LDG VL R F+ PH L+VC+ECL L K+++PEAALANGLWLGD P+ LR ATFVE++AASPVR+SGMVLALD+LKVGNV GSAK +MRGTFTFYMQDAYGVQ RLPACDTD+AGSFT ALVGA+P+ QLR+L GARR MV LL + LDKDN+LVG H+LA++A +S ENLD Y DDG++P+AI DA++ V D T +YA+ARSTHAHGNRE P + EDG A DD PPFII TNA++ +GDD AV+S P RLR LG AT A G+ SL Q AA+A AG+P P GT ALVLTHSG+ VSDF++PGLF A+F LFPHGVGGHLD R R L LK+WAQILLRRRD RFRK RTFL+CVCALIFRREA++N +KL GRV +AS ++ VT +DL AAEME +S S L DR GIR Sbjct: 47 RAAR-PLAFAPVVKQRPILAFNHSQGRIDGHDTPHLLDDIHHPSVMHKCLADFDTFMVNSIRRTSCAVCDRYCRKMHCKLVAVKDLPHKYLLVANESLLNCAAVRDEFFNYPGD--HRNVLDGHVLARQGFQPDAPHHLRVCQECLNSLLKDKMPEAALANGLWLGDFPDHLRGATFVEMMAASPVRISGMVLALDELKVGNVRGSAKSLMRGTFTFYMQDAYGVQLRLPACDTDIAGSFTCALVGAKPSVGQLRKLFGARRKMVEDLLAFQLDKDNQLVGVHQLAQEAQLSAENLDTYKDDGSIPKAIFDALLPVNDSTNAYANARSTHAHGNRE---PDDHEDGPAPPAAADHADDGAGATPPFIIETNAIMPSGDDLAVSSHAKPGRLRTLGVVLNSRHGGRPSAATAASGDASLPQMAAAQARAAAGQP-PDGTQNALVLTHSGQMVSDFHNPGLFVGAYFDLFPHGVGGHLDKRTRPLDLKRWAQILLRRRDARFRKSRTFLYCVCALIFRREAISNARWKLRGRVPRDVASRIARVTAQDLRAVAAEMETGSSGFSALADRPGIR 610
BLAST of mRNA_L-elsbetiae_contig7995.16967.1 vs. uniprot
Match: A0A6H5K8N9_9PHAE (Helitron_like_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8N9_9PHAE) HSP 1 Score: 580 bits (1496), Expect = 5.660e-185 Identity = 313/521 (60.08%), Postives = 373/521 (71.59%), Query Frame = 2 Query: 371 SDFQAHMVNSIRSTPCVVCDRLCKRADIKLMAAKELPHPHLLKATDKLLNCRDVRSTFFDYPGDDGEPKCLDGLVLERVAFEQQPPHRLQVCKECLGDLSKERIPEAALANGLWLGDLPERLRDATFVELLAASPVRMSGMVLALDKLKVGNVAGSAKPVMRGTFTFYMQDAYGVQQRLPACDTDLAGSFTIALVGARPTHAQLRRLLGARRDMVLALLEYLLDKDNRLVGEHKLARQAIMSPENLDRYSDDGAVPQAILDAIISVKDPTGSYADARSTHAHGNRETETPLNTEDGGAV------VDDDGSPLPPFIINTNAVVDTGDDGAVASSTMPRRLRRLG-------------ATLADGEPSLAQETAAEAAVRAGRPSPIGTDKALVLTHSGKFVSDFYDPGLFAAAFFTLFPHGVGGHLDDRPRFLPLKKWAQILLRRRDPRFRKHRTFLFCVCALIFRREAMANTHFKLSGRVSPQLASLLSSVTPEDLSTAAAEMEGRASRASTLRDREGIR 1876 +DF + T C VCDR C++ KL+A K+LPH +LL A + LLNC VR FF+YPGD LDG VL R F+ PH L+VC+ECL L K+++PEAALANGLWLGD P+ LR ATFVE++AASPVR+SGMVLALD+LKVGNV GSAK +MRGTFTFYMQDAYGVQ RLPACDTD+AGSFT ALVGA+P+ QLR+L GARR MV LL + LDKDN+LVG H+LA++A +S ENLD Y DDG++P+AI DA++ V D T +YA+ARSTHAHGNRE P + EDG A DD PPFII TNA++ +GDD AV+S P RLR LG AT A G+ SL Q AA+A AG+P P GT ALVLTHSG+ VSDF++PGLF A+F LFPHGVGGHLD R R L LK+WAQILLRRRD RFRK RTFL+CVCALIFRREA++N +KL GRV +AS ++ VT +DL AAEME +S S L DR GIR Sbjct: 16 TDFGPGTLFRGEKTSCAVCDRYCRKMHCKLVAVKDLPHKYLLVANESLLNCAAVRDEFFNYPGD--HRNVLDGHVLARQGFQPDAPHHLRVCQECLNSLLKDKMPEAALANGLWLGDFPDHLRGATFVEMMAASPVRISGMVLALDELKVGNVRGSAKSLMRGTFTFYMQDAYGVQLRLPACDTDIAGSFTCALVGAKPSVGQLRKLFGARRKMVEDLLAFQLDKDNQLVGVHQLAQEAQLSAENLDTYKDDGSIPKAIFDALLPVNDSTNAYANARSTHAHGNRE---PDDHEDGPAPPAAADHADDGAGATPPFIIETNAIMPSGDDLAVSSHAKPGRLRTLGVVLNSRHGGRPSAATAASGDASLPQMAAAQARAAAGQP-PDGTQNALVLTHSGQMVSDFHNPGLFVGAYFDLFPHGVGGHLDKRTRPLDLKRWAQILLRRRDARFRKSRTFLYCVCALIFRREAISNARWKLRGRVPRDVASRIAGVTAQDLRAVAAEMETGSSGFSALADRPGIR 530
BLAST of mRNA_L-elsbetiae_contig7995.16967.1 vs. uniprot
Match: D7G3U9_ECTSI (ATP-dependent DNA helicase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3U9_ECTSI) HSP 1 Score: 549 bits (1415), Expect = 7.070e-166 Identity = 277/400 (69.25%), Postives = 320/400 (80.00%), Query Frame = 2 Query: 230 RGPRPFVPFLKSPPVLACDSAEGIVDGHDRPHMLDDIQHPSVQHKCLSDFQAHMVNSIRSTPCVVCDRLCKRADIKLMAAKELPHPHLLKATDKLLNCRDVRSTFFDYPGDDGEPKCLDGLVLERVAFEQQPPHRLQVCKECLGDLSKERIPEAALANGLWLGDLPERLRDATFVELLAASPVRMSGMVLALDKLKVGNVAGSAKPVMRGTFTFYMQDAYGVQQRLPACDTDLAGSFTIALVGARPTHAQLRRLLGARRDMVLALLEYLLDKDNRLVGEHKLARQAIMSPENLDRYSDDGAVPQAILDAIISVKDPTGSYADARSTHAHGNRETETPLNTEDGGAVVDDDGSPLPPFIINTNAVVDTGDDGAVASSTMPRRLRRLGATL--ADGEPSLAQ 1423 RGP PFVP +K+PPVLACDS EG +DGHDRPHMLD+I HPSV HKCLSDF H+VNS+RST C +CDR CK D KL+AAK+LPH LLKA DKLL C VR TFF+YPGDD PK LDGLVLER+ FE P+R+QVCKECL L K+RIPEAALANGLWLGD PE LR ATFVE++AASPVR+SGMVLALD+LK G+V+GSAK MRGTFTFYMQDAYGVQ RLPACDTD+AGSFT ALVG +P AQLRRLLGARR MV LL++ LDKDNRLVG+H LAR+A ++PENL YS+DG++P+A+LDAI+ +KD +Y++ARSTHAHGNRE + T DGG DDG P PF+I TNAVVDTGDD AVA + P RLR LG + A G PSLA+ Sbjct: 163 RGPPPFVPVVKTPPVLACDSPEGRMDGHDRPHMLDNIHHPSVLHKCLSDFTNHIVNSVRSTSCGICDRNCKSMDCKLVAAKDLPHKDLLKADDKLLACSAVRGTFFNYPGDDSVPKLLDGLVLERLGFESTSPYRMQVCKECLQSLLKKRIPEAALANGLWLGDFPEHLRSATFVEMIAASPVRISGMVLALDELKTGSVSGSAKSQMRGTFTFYMQDAYGVQLRLPACDTDIAGSFTCALVGCKPNLAQLRRLLGARRQMVQDLLDFQLDKDNRLVGQHTLAREAQLAPENLHGYSNDGSIPKAVLDAILPIKDSAKAYSNARSTHAHGNREDDP---TPDGGIESTDDG-PTAPFVIETNAVVDTGDDLAVAGACKPNRLRDLGRAMQTASGSPSLAE 558
BLAST of mRNA_L-elsbetiae_contig7995.16967.1 vs. uniprot
Match: A0A6H5KTA2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTA2_9PHAE) HSP 1 Score: 491 bits (1264), Expect = 2.410e-144 Identity = 273/571 (47.81%), Postives = 357/571 (62.52%), Query Frame = 2 Query: 245 FVPFLKSPPVLACDSAEGIVDGHDRPHMLDDIQHPSVQHKCLSDFQAHMVNSIRSTPCVVCDRLCKRADIKLMAAKELPHPHLLKATDKLLNCRDVRSTFFDYPGDDGEPKCLDGLVLERVAFEQQPPHRLQVCKECLGDLSKERIPEAALANGLWLGDLPERLRDATFVELLAASPVRMSGMVLALDKLKVGNVAGSAKPVMRGTFTFYMQDAYGVQQRLPACDTDLAGSFTIALVGARPTHAQLRRLLGARRDMVLALLEYLLDKDNRLVGEHKLARQAIMSPENLDRYSDDGAVPQAILDAIISVKDPTGSYADARSTHAHGNRETETPLNTEDGGAVVDDDGSPLPPFIINTNAVVDTGDDGAVASSTMPRRLRRLGATLADGEPSLA------QETAAEAAVRAGRPSPIG---------------------TDKALVLTHSGKFVSDFYDPGLFAAAFFTLFPHGVGGHLDDRPRFLPLKKWAQILLRRRDPRFRKHRTFLFCVCALIFRREAMANTHFKLSGRVSPQLASLLSSVTPEDLSTAAAEMEGRASRASTLRDREGIR 1876 + P + PV A + EG DGHDRP + D+ S+ KC++DF +M ++I S C VCD +C+R D + ++A ELP+ LL A L + + DYPGD KCLDGLVL R FE P HRL+VC ECL DL+ + P A LANGLW+GD PE L+D+T+VE+ AASPVR SGMV AL++LKVG + GSA +MRGTFTF+ Q+AYGV++ LP CDTD+AGS T ALVGARPT AQLR+LLGARR + L+++ D+ N+L GEH L ++A S ENLD + DG+VP ILD++I D + A S++ NR+ ETP++ D AV + P FII+ AV+ +G + AV+S + P RLR L L + + A +E A+AA PS T LVL H+GK V DF +PG+ AA+F LFPHGVGGHLD R R L KWA+ LLRRRDPRFRK+RTF+FC+ A+IFRREA++N H+KL+GRVS +A L +TP+DL A E+EG S A L +R R Sbjct: 2172 YAPTVTETPVTAFNHPEGRSDGHDRPALTKDVLGTSMLFKCIADFHTYMADNIHSVSCAVCDLMCRRIDCEWVSANELPNRSLLTAGPHLKAHDSIMNDMKDYPGDTN--KCLDGLVLAREGFESGPLHRLRVCSECLRDLNSNKTPYATLANGLWVGDFPEHLKDSTWVEMAAASPVRTSGMVFALEQLKVGAIPGSAHRMMRGTFTFFFQNAYGVEKVLPTCDTDIAGSMTCALVGARPTEAQLRKLLGARRSRIQELMDFQRDEQNQLAGEHVLFKRAQTSVENLDTFPQDGSVPPRILDSLIPAVDASRLREKASSSYVRDNRQPETPVDDADE-AVDGQNADDNPAFIIDNCAVIPSGREQAVSSESRPERLRTLQTDLINSAGTAAPTAMDVEEDDAQAA--GSTPSXXXXXXXXXXXXXXXXXXXXXXEQTKNMLVLPHTGKMVEDFNEPGVMIAAYFDLFPHGVGGHLDKRQRPLNFTKWARCLLRRRDPRFRKNRTFVFCLAAIIFRREAISNAHWKLTGRVSRGVAQELDGITPDDLLAVAREIEGGTSTAKALANRPAAR 2737
BLAST of mRNA_L-elsbetiae_contig7995.16967.1 vs. uniprot
Match: A0A6H5JN07_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN07_9PHAE) HSP 1 Score: 410 bits (1055), Expect = 2.640e-117 Identity = 240/557 (43.09%), Postives = 316/557 (56.73%), Query Frame = 2 Query: 218 RRAERGPRPFVPFLKSPPVLACDSAEGIVDGHDRP-HMLDDIQHPSVQHKCLSDFQAHMVNSIRSTPCVVCDRLCKRADIKLMAAKELPHPHLLKATDKLLNCRDVRSTFFDYPGDDGEPKCLDGLVLERVAFEQQPPHRLQVCKECLGDLSKERIPEAALANGLWLGDLPERLRDATFVELLAASPVRMSGMVLALDKLKVGNVAGSAKPVMRGTFTFYMQDAYGVQQRLPACDTDLAGSFTIALVGARPTHAQLRRLLGARRDMVLALLEYLLDKDNRLVGEHKLARQAIMSPENLDRYSDDGAVPQAILDAIISVKDPTGSYADARSTHAHGNRETETPLNTEDGGAVVD---------DDGSPLPPFIINTNAVVDTGDDGAVASSTMPRRLRRLGATLADGEPS----------LAQETAAEAAVRAGRPSPIGTDKALVLTHSGKFVSDFYDPGLFAAAFFTLFPHGVGGHLDDRPRFLPLKKWAQILLRRRDPRFRKHRTFLFCVCALIFRREAMANTHFKLSGRVSPQLASLLSSVTPEDLSTAAAEME 1828 +R RGP PFVP +K PV ACD EG++DG DRP +++D + HP C AH+V+S S V D C + D + A+EL + LL L C + +F +YPGD + K LDGLVL FE PHRL+VC CL D+ K ++ G LGD PE R A +VE++AA+PVRMSG +AL++ K+ ++GSAK +MRGTFTFYMQ+ Y V + LPAC TD+AG+FT AL G++ QLR L GARR M A S EN Y++DG +P+ I DA++ V + + A+ARSTHA GNRE E P A D+G+P FII TN V+ TG+D A + RLR L + + PS + ++ A++A A R P A+V+TH+G VSDFYD GLF A+F LF HG+GGHLD R R + K+WAQI LRRRD RF K +TF FCVCAL FRREA N +K+ G + A L+S++PED+ AA E+E Sbjct: 114 KRVARGPVPFVPIIKERPVSACDHREGLLDGIDRPLYLVDGVLHPPY---CTKVLVAHIVDSSLSVSRAVYDLFCTKTDCVWVKAEELQNKDLLTPNKILTECAMFKPSFINYPGD--KAKVLDGLVLALEDFEAGEPHRLRVCSTCLKDMRKNKMGRQRKYYGFMLGDFPEEFRSANWVEMIAANPVRMSGTAIALEEFKIHGISGSAKSLMRGTFTFYMQNLYAVGKHLPACATDVAGAFTCALFGSKQKPEQLRPLFGARRSM------------------------AQTSDENPRTYAEDGFIPKEIQDALVPVTEKNNTVANARSTHAQGNREPEEPGGDSSTSAKYGNNGNTDSSTDEGAPAS-FIIETNVVLPTGEDMANSREYRSTRLRALQSMMKKSAPSRTTNVATGASMREQANAKSAAAARRAPPFLPPNAMVVTHTGNMVSDFYDEGLFVVAYFNLFSHGIGGHLDVRRRPVSCKEWAQIFLRRRDGRFSKDKTFWFCVCALTFRREATNNARWKIKGGMPSDAAETLASISPEDIPAAAKELE 640
BLAST of mRNA_L-elsbetiae_contig7995.16967.1 vs. uniprot
Match: A0A6H5KPV6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPV6_9PHAE) HSP 1 Score: 375 bits (963), Expect = 3.120e-113 Identity = 215/471 (45.65%), Postives = 270/471 (57.32%), Query Frame = 1 Query: 1879 LKCLHLLFLLTLDDLNQPPNPDIIAIIKYLQRLDAATLTLFLNDPSTFTPASASLDDVADDVTVQAPSRRRRGTGRHGPGATRRLGFLLRNAENNCFFNAALALGLAAWDAQQLPPSPAVTPAAATFFNAVQLLRDCMFNGSALPDHVVVSLPFSCPSHIFGNVFGFLLKPFSQYHLPPRPFPFYLPSFLAFILRSHALIQSAARQARQQVLAPASLPGTGSAMGDPACVFDALGRACPQDGSVLWPGNIDVQHALVLRTRRELGLDWRFANNCGIHDHSLLEVTPDQSARLRNAPILTLPAGGSATFQQKLATFFADSSPEDLSMPGQLLCPYCAAELHQTSCNWTVRPWTEANAPDRLFFRSSEQVFRGVQGQPMQASSAVTLGASYSLVGVSYHVGPSHGVRNHFVSQIRLRGRWHHYDCLNGGILTSSDSFDHEWHASSLYILVYMRTSLCIAAPAAYGQNQQQSRS 3291 L+ L+LLF +TL+DLNQPP+ DI+AII YL RLD TL +FL D S FTPASASLD D+ + ++RRR TGRHGPGATRR+ L+ N+ NNCFFN+ALALGLAAWD PSP P C+ N L+P + + PP ILR QSAARQAR +L + G G MG+ A VF+A+ RACP+ GS LWP ++ Q A V RTRR+ GLDWR+ANNC I +HS EVTPDQSARLR A ++T+P G SATFQ + FF S+P DL++PGQ LCPYCA +H+ C+WT+ PWT APDR+FFRSS VFRG L GRWH YDCL GGI+TSSD++D WH SS+++LVY+R+++C+A P Y + +RS Sbjct: 266 LEALNLLFPVTLEDLNQPPDRDILAIINYLHRLDKETLKVFLQDASRFTPASASLDAATDEGPTPSRTQRRRTTGRHGPGATRRVAHLIANSNNNCFFNSALALGLAAWDG----PSPCPPPV-------------CLHNN---------------------------LQPNASF-FPPS------------ILR-----QSAARQARHDILHGTPITGAGCDMGNVAGVFEAIARACPRQGSPLWPDSVFDQQARVARTRRDFGLDWRYANNCTIGNHSAREVTPDQSARLRAATVITIPNGVSATFQDNVFDFFRSSAPTDLAIPGQSLCPYCADNVHRNMCDWTLLPWTSNTAPDRIFFRSS-CVFRG------------------------------------------LCGRWHKYDCLQGGIVTSSDAYDSGWHVSSVHMLVYLRSAICVATPPPYAPSSAATRS 631
BLAST of mRNA_L-elsbetiae_contig7995.16967.1 vs. uniprot
Match: A0A6H5K6P6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6P6_9PHAE) HSP 1 Score: 364 bits (934), Expect = 5.530e-113 Identity = 203/417 (48.68%), Postives = 245/417 (58.75%), Query Frame = 1 Query: 1867 RDPGLKCLHLLFLLTLDDLNQPPNPDIIAIIKYLQRLDAATLTLFLNDPSTFTPASASLDDVADDVTVQAPSRRRRGTGRHGPGATRRLGFLLRNAENNCFFNAALALGLAAWDAQQLPPSPAVTPAAATFFNAVQLLRDCMFNGSALPDHVVVSLPFSCPSHIFGNVFGFLLKPFSQYHLPPRPFPFYLPSFLAFILRSHALIQSAARQARQQVLAPASLPGTGSAMGDPACVFDALGRACPQDGSVLWPGNIDVQHALVLRTRRELGLDWRFANNCGIHDHSLLEVTPDQSARLRNAPILTLPAGGSATFQQKLATFFADSSPEDLSMPGQLLCPYCAAELHQTSCNWTVRPWTEANAPDRLFFRSSEQVFRGVQGQPMQASSAVTLGASYSLVGVSYHVGPSHGV-RNHFVSQI 3114 R L L+LLF +TL+DLNQPP+ DI+AII YL RLD TL +FL D S FTPASASLD D+ + ++RRR TGRHGPGATRR+ L+ N+ NNCFFN+ALALGLAAWD QQLPPS A TPAA +FF+A+QLLRD MF+GSALPDH+V GS LWP ++ Q A V RTRR+ GLDWR+ANNC I +HS EVTPDQSARLR A ++T+P G SATFQ + FF S+P DL++PGQ LCPYCA +H+ C+WT+ PWT APDR+FFRSS VFRG+ G+PM S T+GA+YSLVGVSY + G RNHFVSQ+ Sbjct: 27 RATSLDALNLLFPVTLEDLNQPPDRDILAIINYLHRLDKETLKVFLQDASRFTPASASLDAATDEGPTPSRTQRRRTTGRHGPGATRRVAHLIANSNNNCFFNSALALGLAAWDGQQLPPSSAGTPAAGSFFSALQLLRDSMFDGSALPDHIV--------------------------------------------------------------------------------------------GSPLWPDSVFDQQARVARTRRDFGLDWRYANNCTIGNHSAREVTPDQSARLRAATVITIPNGVSATFQDNVFDFFRSSAPTDLAIPGQSLCPYCADNVHRNMCDWTLLPWTSNTAPDRIFFRSS-CVFRGLDGRPMAPSMTFTMGAAYSLVGVSYFLPLGGGTNRNHFVSQV 350
BLAST of mRNA_L-elsbetiae_contig7995.16967.1 vs. uniprot
Match: A0A6H5J5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5A5_9PHAE) HSP 1 Score: 265 bits (678), Expect = 9.260e-70 Identity = 201/576 (34.90%), Postives = 258/576 (44.79%), Query Frame = 2 Query: 215 RRRAE----RGPRPFVPFLKSPPVLACDSAEGIVDGHDRP-HMLDDIQHPSVQHKCLSDFQAHMVNSIRSTPCVVCDRLCKRADIKLMAAKELPHPHLLKATDKLLNCRDVRSTFFDYPGDDGEPKCLDGLVLERVAFEQQPPHRLQVCKECLGDLSKERIPEAALANGLWLGDLPERLRDATFVELLAASPVRMSGMVLALDKLKVGNVAGSAKPVMRGTFTFYMQDAYGVQQRLPACDTDLAGSFTIALVGARPTHAQLRRLLGARRDMVLALLEYLLDKDNRLVGEHKLARQAIMSPENLDRYSDDGAVPQAILDAIISVKDPTGSYADARSTHAHGNRETETPLNTEDG---------------GAVV--DDDGSPLPPFIINTNAVVDTGDDGAVASSTMPRRLRRLGATLADGEPSLAQETAAEAAVRAGRPSPIGTDKALVLTHSGKFVSDFYDPGLFAAAFFTLFPHGVGGHLDDRPRFLPLKKWAQILLRRRDPRFRKHRTFLFCVCALIFRREAMANTHFKLSGRVSPQLASLLSSVTPEDLSTAAAEMEGRASRASTLRDREGIR 1876 RRRA+ RGP PF P++ PPVLACD AEG+VDGHDR + +DD+ + SV H C S F + +S S VCD +CK D +L++A ELP+ LL A KL NC VR FF Y GD+ L+GLVL+R FE PHRL+VC L DL K + P+AA AN +LGD P L++AT+VE+LAA PVR+SG ++AL++LK + LV S NL Y +DG+ PQAI DA+ISV D + A ARSTHAHGNRE E P+ G G V DDD LPP + T AV+ +G D A +S P RLR L A L+ +SD P A +KH++FLF VC LIFRREA+ N +KL+GRVS + A L+++TPEDL+ A EME +S S L +R +R Sbjct: 9 RRRAQPARNRGPLPFAPYITEPPVLACDHAEGVVDGHDRLLYAVDDVLNSSVLHHCASRFITKLADSDSSVS--VCDCMCKEKDCELLSAGELPNRDLLTADAKLTNCDAVRPLFFTYLGDNSN--LLNGLVLQREGFESTAPHRLRVCSIRLADLRKNKCPKAAKANVFFLGDFPAELKEATWVEMLAAGPVRLSGTIIALEQLK----------------------------------------SVVCLV----------------------------------------------SEANLQGYPEDGSTPQAIQDALISVTDRRNTVAAARSTHAHGNREPEQPVGGTSGSDGQRDGEDSDRQGSGDVNGDDDDDGVLPPCVNETKAVMPSGSDLAKSSQYRPTRLRALQAELS--------------------------------------LSDSTGPASLA---------------------------------------QKHKSFLFFVCVLIFRREAIKNARWKLTGRVSRRTAETLATITPEDLAAAGKEMEQGSSAWSALANRNAVR 417
BLAST of mRNA_L-elsbetiae_contig7995.16967.1 vs. uniprot
Match: A0A6H5K882_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K882_9PHAE) HSP 1 Score: 225 bits (573), Expect = 2.810e-56 Identity = 174/555 (31.35%), Postives = 232/555 (41.80%), Query Frame = 2 Query: 215 RRRAERGPRPFVPFLKSPPVLACDSAEGIVDGHDRP-HMLDDIQHPSVQHKCLSDFQAHMVNSIRSTPCVVCDRLCKRADIKLMAAKELPHPHLLKATDKLLNCRDVRSTFFDYPGDDGEPKCLDGLVLERVAFEQQPPHRLQVCKECLGDLSKERIPEAALANGLWLGDLPERLRDATFVELLAASPVRMSGMVLALDKLKVGNVAGSAKPVMRGTFTFYMQDAYGVQQRLPACDTDLAGSFTIALVGARPTHAQLRRLLGARRDMVLALLEYLLDKDNRLVGEHKLARQAIMSPENLDRYSDDGAVPQAILDAIISVKDPTGSYADARSTHAHGNRETETPLNTEDGGAVVDDDGSPLPPFIINTNAVVDTGDDGAVASSTMPRRLRRLGATLADGEPSLAQETAAEAAVRAGRPSPIGTDKALVLTHSGKFVSDFYDPGLFAAAFFTLFPHGVGGHLDDRPRFLPLKKWAQILLRRRDPRFRKHRTFLFCVCALIFRREAMANTHFKLSGRVSPQLASLLSSVTPEDLSTAAAEMEGRASRASTLRDREGIR 1876 R+ E GP PF P + PPVLACD AEG+VDGHDRP + +DD+ + SV H C S F + +S+ S C LP+ LL A KL NC VR F +YPGD+ L+ LVL+R F+ PHRL+ K +LG+ P L++AT+VE+LAASPVR+SG ++AL++LKVG V GSAK + T +R+ R D V A+MS +P+ T +L K+ FYD GLF AAFF LFPHG+GGHLD+R R++ ++WA+ILLR+RDPRFRKH++FLFCV ALIFRREA+ N +KL+GR+S + A L+++TPEDL+ AA EME +S S L +R +R Sbjct: 22 RQEIELGPLPFAPCITKPPVLACDHAEGVVDGHDRPLYAVDDVLNSSVLHHCASRFITKLADSVLSVSCA------------------LPNRDLLTADAKLTNCDAVRPLFSNYPGDNSN--LLNSLVLQREGFKSTAPHRLRPKKT------------------FFLGEFPAELKEATWVEVLAASPVRLSGTIIALEQLKVGRVPGSAKSMDNAT------------ERI-------------------------------RTDRV-----------------------AVMST-------------------------------------------------------------------------------------------------------------------------APMTTTAHCLL----KWCLTFYDEGLFVAAFFDLFPHGIGGHLDERRRYMSFQEWAKILLRQRDPRFRKHKSFLFCVWALIFRREAIKNARWKLTGRMSRRTAETLATITPEDLAAAAKEMEQGSSVWSALANRNAVR 347 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7995.16967.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7995.16967.1 >prot_L-elsbetiae_contig7995.16967.1 ID=prot_L-elsbetiae_contig7995.16967.1|Name=mRNA_L-elsbetiae_contig7995.16967.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=519bp MLDDIQHPSVQHKCLSDFQAHMVNSIRSTPCVVCDRLCKRADIKLMAAKEback to top mRNA from alignment at L-elsbetiae_contig7995:3522..9090+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7995.16967.1 ID=mRNA_L-elsbetiae_contig7995.16967.1|Name=mRNA_L-elsbetiae_contig7995.16967.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5569bp|location=Sequence derived from alignment at L-elsbetiae_contig7995:3522..9090+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7995:3522..9090+ >mRNA_L-elsbetiae_contig7995.16967.1 ID=mRNA_L-elsbetiae_contig7995.16967.1|Name=mRNA_L-elsbetiae_contig7995.16967.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3114bp|location=Sequence derived from alignment at L-elsbetiae_contig7995:3522..9090+ (Laminarionema elsbetiae ELsaHSoW15)back to top |