mRNA_L-elsbetiae_contig7964.16933.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
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Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7964.16933.1 vs. uniprot
Match: D7G0S6_ECTSI (Similar to ubiquitin specific peptidase 15 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0S6_ECTSI) HSP 1 Score: 249 bits (637), Expect = 1.950e-72 Identity = 133/179 (74.30%), Postives = 145/179 (81.01%), Query Frame = 1
Query: 193 AEGAESVTVKAEDNEHRVAGLSLDEGNQGGGVAPAKVEPESSERAGPGPIDNGSLGEGRELREGMMEGEDYVLLHNRAYELLEEWYSGGPRFKRWVVSLGSNTHTQLTVELFPVKFMVYTCLADGKADEASLRVQLYSRAKTMRQVCADVKSSLNLTARVDTRLSLKKLEADTEQGAAG 729
AE V VKA+ NEHRVA LSL+EG G + +ERAGPGPIDN +LGEGRELRE +MEGEDYVLLHNRAYELLE WY GGPRFKRWVVSLG + TQLTVELFPV+FMVYTCL DG+ADE S+ VQLYSRAKTMRQ+CADVKSSLNLT RVDTRLSLKKLE + EQG AG
Sbjct: 81 AEDVAGVAVKADTNEHRVAELSLEEGGNSSGGGGERAS-SFTERAGPGPIDNRTLGEGRELRETLMEGEDYVLLHNRAYELLEAWYGGGPRFKRWVVSLGDDARTQLTVELFPVRFMVYTCLPDGRADEDSVSVQLYSRAKTMRQICADVKSSLNLTPRVDTRLSLKKLE-EAEQGTAG 257
BLAST of mRNA_L-elsbetiae_contig7964.16933.1 vs. uniprot
Match: A0A8J2SNQ1_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SNQ1_9STRA) HSP 1 Score: 66.6 bits (161), Expect = 6.160e-9 Identity = 53/142 (37.32%), Postives = 74/142 (52.11%), Query Frame = 1
Query: 313 SSERAGPGPIDNGSLG--EGRE--LREGMMEGEDYVLLHNRAYELLEEWYSGGPRFKRWVVSLGSNTHTQLTVELFPVKFMVYTCLADGKADEASLRVQLY--SRAKTMRQVCADVKSSLNLTARVDTRLSLKKLEADTEQG 720
SS GPGPI N LG G E LREG++E +DY LL RA++LL WY FK VV S++ LT+E+FP++F V DG A S VQL + + R+ D +T R + R+ +K ++ +G
Sbjct: 68 SSVEEGPGPITNEPLGVSAGSEFILREGLVERDDYALLPERAWDLLTRWYGRDYEFKALVVQGASSS--DLTLEVFPLRFDVRIVSEDGAASGPSNSVQLSRSDKVSSARRALEDA-----VTGRGERRVWVKPASDESFEG 202
BLAST of mRNA_L-elsbetiae_contig7964.16933.1 vs. uniprot
Match: A0A812V469_9DINO (UBP5 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812V469_9DINO) HSP 1 Score: 61.6 bits (148), Expect = 2.070e-7 Identity = 39/114 (34.21%), Postives = 62/114 (54.39%), Query Frame = 1
Query: 331 PGPIDNGSL---GEGRELREGMMEGEDYVLLHNRAYELLEEWYSGGPRFKRWVVSLGSNTHTQLTVELFPVKFMVYTCLADGKADEASLRVQLY-SRAKTMRQVCADVKSSLNL 660
P IDN L + L+ G++E +D++LLH A++ L WY GGP +R V+ N QL VEL+P+ V+ G + +Q+ S ++T+ QV +V ++LNL
Sbjct: 77 PSEIDNSDLLPRPDCTRLQSGLVENQDFILLHEEAWKKLHSWYGGGPALRRVVIGSLEN-RAQLRVELYPLCLTVFQVDDYGNVEPDDRGLQIMCSTSETVEQVLRNVLTNLNL 189
BLAST of mRNA_L-elsbetiae_contig7964.16933.1 vs. uniprot
Match: A0A328EAD1_9ASTE (Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Cuscuta sect. Cleistogrammica TaxID=1824901 RepID=A0A328EAD1_9ASTE) HSP 1 Score: 61.6 bits (148), Expect = 2.940e-7 Identity = 44/140 (31.43%), Postives = 71/140 (50.71%), Query Frame = 1
Query: 301 VEPESSERAGPGPIDNGSLGEGR--------ELREGMMEGEDYVLLHNRAYELLEEWYSGGPRFKRWVVSLGSNTHTQLTVELFPVKFMVYTCLADGKADEASLRVQLYSRAKTMRQVCADVKSSLNLTARVDTRLSLKK 696
+ P++ ER PGPIDNG + G +L ++EG DY L+ +E+L +WY+GGP R V+ LG N QLT+E++P+ + + + +E LR+ T+ + +K L AR+ + KK
Sbjct: 73 IAPDTCER--PGPIDNGDIIVGGSDNKCDDPQLLRTLLEGRDYELVPKEVWEILFQWYNGGPALPRKVICLGDNQ--QLTIEVYPLCLNI---IDSNEKNEKVLRLSKKDSLHTLYERVCGLKGILLERARIWDYFNRKK 205
BLAST of mRNA_L-elsbetiae_contig7964.16933.1 vs. uniprot
Match: A0A067JZ20_JATCU (Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Jatropha curcas TaxID=180498 RepID=A0A067JZ20_JATCU) HSP 1 Score: 61.6 bits (148), Expect = 2.950e-7 Identity = 43/116 (37.07%), Postives = 61/116 (52.59%), Query Frame = 1
Query: 331 PGPI------DNGSLGEGR--ELREGMMEGEDYVLLHNRAYELLEEWYSGGPRFKRWVVSLGSNTHTQLTVELFPVKFMVYTCLADGK-----ADEASLRVQLYSRAKTMRQVCAD 639
PGPI +NGS GE EL ++EG DYVL+ + +E L +WY GGP R ++S G+ Q VE+FP+ V D + + +ASL +LY R T+R + D
Sbjct: 90 PGPINNSEIVENGSGGESDDLELARTLLEGRDYVLVPQKVWEKLVQWYKGGPALPRKMISQGAFNKKQFNVEVFPLSLKVIDSRDDCEFTIRLSKKASLH-ELYERVCTLRGIERD 204
BLAST of mRNA_L-elsbetiae_contig7964.16933.1 vs. uniprot
Match: A0A162A4S0_DAUCS (Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A162A4S0_DAUCS) HSP 1 Score: 60.1 bits (144), Expect = 9.660e-7 Identity = 29/75 (38.67%), Postives = 48/75 (64.00%), Query Frame = 1
Query: 370 ELREGMMEGEDYVLLHNRAYELLEEWYSGGPRFKRWVVSLGSNTHTQLTVELFPVKFMVYTCLADGKADEASLRV 594
ELR+G++EG DY+LL + L WY GGP R V+S G + T+L+VE++P++ ++ K D++S+R+
Sbjct: 91 ELRDGLVEGTDYILLPKAVWNQLHAWYGGGPALARKVISSGIS-QTELSVEVYPLRLQLHLI---PKGDQSSIRI 161
BLAST of mRNA_L-elsbetiae_contig7964.16933.1 vs. uniprot
Match: A0A812QDQ1_9DINO (UBP8 protein n=4 Tax=Symbiodinium TaxID=2949 RepID=A0A812QDQ1_9DINO) HSP 1 Score: 59.7 bits (143), Expect = 1.360e-6 Identity = 40/114 (35.09%), Postives = 64/114 (56.14%), Query Frame = 1
Query: 331 PGPIDNGSL---GEGRELREGMMEGEDYVLLHNRAYELLEEWYSGGPRFKRWVVSLGSNTHTQLTVELFPVKFMVYTCLADGKADEASLRVQLY-SRAKTMRQVCADVKSSLNL 660
P IDN L + L+ G++E +D++LLH A++ L WY GGP +R V+ +T QL VEL+P+ V+ + D E R+Q+ S +T+ QV D+ ++L+L
Sbjct: 75 PAEIDNSDLLPRPDCTRLQSGLVENQDFILLHEEAWKKLHGWYGGGPALRRRVIG---STENQLRVELYPLCLTVFQ-VDDYGNPERDRRMQIMPSTHETVDQVIRDLLTNLDL 184
BLAST of mRNA_L-elsbetiae_contig7964.16933.1 vs. uniprot
Match: A0A1Q9CGM9_SYMMI (Ubiquitin carboxyl-terminal hydrolase 5 n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9CGM9_SYMMI) HSP 1 Score: 57.8 bits (138), Expect = 4.550e-6 Identity = 37/113 (32.74%), Postives = 59/113 (52.21%), Query Frame = 1
Query: 331 PGPIDNGSL---GEGRELREGMMEGEDYVLLHNRAYELLEEWYSGGPRFKRWVVSLGSNTHTQLTVELFPVKFMVYTCLADGKADEASLRVQLYSRAKTMRQVCADVKSSLNL 660
P IDN L + L+ G++E +D++LLH A++ L WY GGP +R V+ N QL VEL+P+ V+ G + + S +T+ QV D+ ++L+L
Sbjct: 75 PAEIDNSDLLPRPDCTRLQSGLVENQDFILLHEEAWKKLHGWYGGGPALRRRVIGSSEN---QLRVELYPLCLTVFQVDDYGNPERDRPMQIMPSTHETVDQVIRDLLTNLDL 184
BLAST of mRNA_L-elsbetiae_contig7964.16933.1 vs. uniprot
Match: A0A2C9W9P6_MANES (Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Manihot esculenta TaxID=3983 RepID=A0A2C9W9P6_MANES) HSP 1 Score: 57.8 bits (138), Expect = 5.760e-6 Identity = 39/111 (35.14%), Postives = 59/111 (53.15%), Query Frame = 1
Query: 331 PGPI------DNGSLGEGR--ELREGMMEGEDYVLLHNRAYELLEEWYSGGPRFKRWVVSLGSNTHTQLTVELFPVKFMVYTCLADGK-----ADEASLRVQLYSRAKTMR 624
PGPI +NGS GE EL ++EG DYVL+ + +E L +WY+GGP R ++S G Q VE++P++ + D + + +ASL +LY R +R
Sbjct: 121 PGPINNSDIVENGSDGENDDLELSRTLLEGRDYVLVPQKVWEKLVQWYTGGPALPRKMISQGVFNKKQFNVEVYPLRLKLIDSRDDSEFTIRLSKKASLH-ELYGRVCALR 230
BLAST of mRNA_L-elsbetiae_contig7964.16933.1 vs. uniprot
Match: B9RYW0_RICCO (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ricinus communis TaxID=3988 RepID=B9RYW0_RICCO) HSP 1 Score: 57.4 bits (137), Expect = 7.700e-6 Identity = 36/113 (31.86%), Postives = 58/113 (51.33%), Query Frame = 1
Query: 331 PGPIDNGSL--------GEGRELREGMMEGEDYVLLHNRAYELLEEWYSGGPRFKRWVVSLGSNTHTQLTVELFPVKFMVYTCLADGKADEASLRVQLYSRA---KTMRQVCA 636
PGPIDN L + EL ++EG DYVL+ + ++ L +WY GGP R ++S G + Q VE++P+ L D + D++ ++L +A + +VCA
Sbjct: 91 PGPIDNSDLVQNGSNIEADDLELSRTLLEGRDYVLVPQKVWDKLVQWYKGGPTLPRKMISQGVSNKKQFNVEVYPLCLK----LVDSR-DDSEFTIRLSKKASLHQLFERVCA 198 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7964.16933.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7964.16933.1 >prot_L-elsbetiae_contig7964.16933.1 ID=prot_L-elsbetiae_contig7964.16933.1|Name=mRNA_L-elsbetiae_contig7964.16933.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=244bp LWKAYVRFDEHTPPPAAAAAAAAAAVSRSPSSSSSMDEDGVLVKTTAAAAback to top mRNA from alignment at L-elsbetiae_contig7964:5997..9081+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7964.16933.1 ID=mRNA_L-elsbetiae_contig7964.16933.1|Name=mRNA_L-elsbetiae_contig7964.16933.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3085bp|location=Sequence derived from alignment at L-elsbetiae_contig7964:5997..9081+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7964:5997..9081+ >mRNA_L-elsbetiae_contig7964.16933.1 ID=mRNA_L-elsbetiae_contig7964.16933.1|Name=mRNA_L-elsbetiae_contig7964.16933.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1464bp|location=Sequence derived from alignment at L-elsbetiae_contig7964:5997..9081+ (Laminarionema elsbetiae ELsaHSoW15)back to top |