mRNA_L-elsbetiae_contig7963.16930.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
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Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7963.16930.1 vs. uniprot
Match: D7G111_ECTSI (Glycine/D-amino acid oxidase-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G111_ECTSI) HSP 1 Score: 85.1 bits (209), Expect = 1.960e-18 Identity = 38/39 (97.44%), Postives = 39/39 (100.00%), Query Frame = 1
Query: 31 QVTSRLVLDCMGNASPMVRQIRWGKKPEGVCLVVGSCAR 147
+VTSRLVLDCMGNASPMVRQIRWGKKPEGVCLVVGSCAR
Sbjct: 220 EVTSRLVLDCMGNASPMVRQIRWGKKPEGVCLVVGSCAR 258
BLAST of mRNA_L-elsbetiae_contig7963.16930.1 vs. uniprot
Match: A0A6H5L433_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L433_9PHAE) HSP 1 Score: 85.1 bits (209), Expect = 4.390e-18 Identity = 38/39 (97.44%), Postives = 39/39 (100.00%), Query Frame = 1
Query: 31 QVTSRLVLDCMGNASPMVRQIRWGKKPEGVCLVVGSCAR 147
+VTSRLVLDCMGNASPMVRQIRWGKKPEGVCLVVGSCAR
Sbjct: 318 EVTSRLVLDCMGNASPMVRQIRWGKKPEGVCLVVGSCAR 356
BLAST of mRNA_L-elsbetiae_contig7963.16930.1 vs. uniprot
Match: A0A836CJX3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJX3_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 4.960e-16 Identity = 32/38 (84.21%), Postives = 36/38 (94.74%), Query Frame = 1
Query: 34 VTSRLVLDCMGNASPMVRQIRWGKKPEGVCLVVGSCAR 147
VT+RLVLDCMGN SPMVRQIRWG+KP+G+CLVVG CAR
Sbjct: 80 VTARLVLDCMGNGSPMVRQIRWGRKPDGMCLVVGCCAR 117
BLAST of mRNA_L-elsbetiae_contig7963.16930.1 vs. uniprot
Match: A0A383W046_TETOB (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383W046_TETOB) HSP 1 Score: 77.8 bits (190), Expect = 1.640e-15 Identity = 33/49 (67.35%), Postives = 41/49 (83.67%), Query Frame = 1
Query: 1 STATPTVYPLQVTSRLVLDCMGNASPMVRQIRWGKKPEGVCLVVGSCAR 147
S+ T Y +T+RL+LDCMG+ASP+VRQ+RWGKKP+GVCLVVG CAR
Sbjct: 232 SSGTRVQYASSITTRLLLDCMGHASPVVRQLRWGKKPDGVCLVVGGCAR 280
BLAST of mRNA_L-elsbetiae_contig7963.16930.1 vs. uniprot
Match: A0A2P6V886_9CHLO (Fad dependent oxidoreductase n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V886_9CHLO) HSP 1 Score: 75.5 bits (184), Expect = 1.070e-14 Identity = 31/39 (79.49%), Postives = 39/39 (100.00%), Query Frame = 1
Query: 31 QVTSRLVLDCMGNASPMVRQIRWGKKPEGVCLVVGSCAR 147
Q+T+RL+LDCMG+ASP+V+QIRWG+KP+GVCLVVGSCAR
Sbjct: 216 QLTARLLLDCMGHASPIVQQIRWGRKPDGVCLVVGSCAR 254
BLAST of mRNA_L-elsbetiae_contig7963.16930.1 vs. uniprot
Match: A0A2R6X2D3_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6X2D3_MARPO) HSP 1 Score: 72.8 bits (177), Expect = 9.490e-14 Identity = 29/36 (80.56%), Postives = 36/36 (100.00%), Query Frame = 1
Query: 40 SRLVLDCMGNASPMVRQIRWGKKPEGVCLVVGSCAR 147
+RLVLDCMGNASP+VRQ+RWG++P+GVCLVVG+CAR
Sbjct: 299 ARLVLDCMGNASPIVRQVRWGQRPDGVCLVVGTCAR 334
BLAST of mRNA_L-elsbetiae_contig7963.16930.1 vs. uniprot
Match: A0A7S0KT21_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0KT21_MICPS) HSP 1 Score: 71.2 bits (173), Expect = 3.310e-13 Identity = 30/41 (73.17%), Postives = 37/41 (90.24%), Query Frame = 1
Query: 25 PLQVTSRLVLDCMGNASPMVRQIRWGKKPEGVCLVVGSCAR 147
P +T+RLV+DCMG ASP+VRQ RWG+KP+GVCLVVG+CAR
Sbjct: 279 PGGITARLVVDCMGFASPIVRQARWGQKPDGVCLVVGACAR 319
BLAST of mRNA_L-elsbetiae_contig7963.16930.1 vs. uniprot
Match: A0A5J4Y8J5_9CHLO (Uncharacterized protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y8J5_9CHLO) HSP 1 Score: 70.1 bits (170), Expect = 8.440e-13 Identity = 27/38 (71.05%), Postives = 34/38 (89.47%), Query Frame = 1
Query: 34 VTSRLVLDCMGNASPMVRQIRWGKKPEGVCLVVGSCAR 147
VT +L++DCMGN SP+VRQ+RWG KP+GVC+VVGSC R
Sbjct: 275 VTGQLIIDCMGNFSPIVRQVRWGHKPDGVCMVVGSCCR 312
BLAST of mRNA_L-elsbetiae_contig7963.16930.1 vs. uniprot
Match: A0A2P6TLF7_CHLSO (Fad dependent oxidoreductase n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TLF7_CHLSO) HSP 1 Score: 69.3 bits (168), Expect = 1.580e-12 Identity = 28/38 (73.68%), Postives = 37/38 (97.37%), Query Frame = 1
Query: 34 VTSRLVLDCMGNASPMVRQIRWGKKPEGVCLVVGSCAR 147
+T+RLVLD MG+ASP+V+Q+RWG+KP+GVCLVVG+CAR
Sbjct: 297 LTARLVLDAMGHASPVVQQVRWGQKPDGVCLVVGTCAR 334
BLAST of mRNA_L-elsbetiae_contig7963.16930.1 vs. uniprot
Match: A0A7S1XBZ8_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1XBZ8_9CHLO) HSP 1 Score: 68.6 bits (166), Expect = 1.910e-12 Identity = 26/39 (66.67%), Postives = 36/39 (92.31%), Query Frame = 1
Query: 31 QVTSRLVLDCMGNASPMVRQIRWGKKPEGVCLVVGSCAR 147
++++RLVLDCMG+ SP+ RQ+RWG KP+G+CLVVGSC+R
Sbjct: 77 ELSARLVLDCMGHGSPITRQLRWGNKPDGMCLVVGSCSR 115 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7963.16930.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7963.16930.1 >prot_L-elsbetiae_contig7963.16930.1 ID=prot_L-elsbetiae_contig7963.16930.1|Name=mRNA_L-elsbetiae_contig7963.16930.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=49bp STATPTVYPLQVTSRLVLDCMGNASPMVRQIRWGKKPEGVCLVVGSCARback to top mRNA from alignment at L-elsbetiae_contig7963:8815..8961- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7963.16930.1 ID=mRNA_L-elsbetiae_contig7963.16930.1|Name=mRNA_L-elsbetiae_contig7963.16930.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=147bp|location=Sequence derived from alignment at L-elsbetiae_contig7963:8815..8961- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7963:8815..8961- >mRNA_L-elsbetiae_contig7963.16930.1 ID=mRNA_L-elsbetiae_contig7963.16930.1|Name=mRNA_L-elsbetiae_contig7963.16930.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=294bp|location=Sequence derived from alignment at L-elsbetiae_contig7963:8815..8961- (Laminarionema elsbetiae ELsaHSoW15)back to top |