mRNA_L-elsbetiae_contig794.16909.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
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Overview
Homology
BLAST of mRNA_L-elsbetiae_contig794.16909.1 vs. uniprot
Match: D7G3E9_ECTSI (Glutathione peroxidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3E9_ECTSI) HSP 1 Score: 180 bits (456), Expect = 2.590e-53 Identity = 85/107 (79.44%), Postives = 94/107 (87.85%), Query Frame = 1
Query: 325 SAETGPAMPVGSALRFETIVDGKPMVPEDFEGNAVLVVNTASLCGLTPQLKELELVHKRFRDEGLIVLGVPSNDFGGQEPWEEHKIKEFYAKDHGVTFPLTAKVCAV 645
+AETG A+P+GS L F+ IVDGKPM P+DFEG AVLVVNTASLCGLTPQLKELELVHKRFR EGL+VLGVPSNDFG QEPW+E KIK+FYAKD GVTFPLT+K V
Sbjct: 111 AAETGTAIPLGSKLAFKAIVDGKPMPPDDFEGKAVLVVNTASLCGLTPQLKELELVHKRFRGEGLVVLGVPSNDFGAQEPWDEEKIKDFYAKDFGVTFPLTSKTVVV 217
BLAST of mRNA_L-elsbetiae_contig794.16909.1 vs. uniprot
Match: A0A835YHH5_9STRA (Glutathione peroxidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHH5_9STRA) HSP 1 Score: 134 bits (336), Expect = 4.740e-36 Identity = 64/97 (65.98%), Postives = 72/97 (74.23%), Query Frame = 1
Query: 346 MPVGSALRFETIVDGKPMVPEDFEGNAVLVVNTASLCGLTPQLKELELVHKRFRDEGLIVLGVPSNDFGGQEPWEEHKIKEFYAKDHGVTFPLTAKV 636
M + L FE + PE F G AVLVVNTAS CGLTPQLKE++LVHKRF+ +GLIVLGVP NDFGGQEPWEE KI +FY +GVTFPL AKV
Sbjct: 1 MAYSAKLDFEGCAGTDKLSPESFAGKAVLVVNTASKCGLTPQLKEMQLVHKRFKAQGLIVLGVPCNDFGGQEPWEEQKIMDFYKSKYGVTFPLAAKV 97
BLAST of mRNA_L-elsbetiae_contig794.16909.1 vs. uniprot
Match: UPI001872225C (glutathione peroxidase n=1 Tax=Pelagibius sp. NBU2595 TaxID=2762760 RepID=UPI001872225C) HSP 1 Score: 110 bits (275), Expect = 1.080e-26 Identity = 58/104 (55.77%), Postives = 72/104 (69.23%), Query Frame = 1
Query: 334 TGPAM---PVGSALRFE-TIVDGKPMVPEDFEGNAVLVVNTASLCGLTPQLKELELVHKRFRDEGLIVLGVPSNDFGGQEPWEEHKIKEFYAKDHGVTFPLTAK 633
TGPA P SA F T ++G+P+ DFEG VL+VNTAS CG TPQ + L+ V +R+RD GL+VLGVPSNDFGGQEP E +IK+F + V FPLT+K
Sbjct: 20 TGPAAAADPAVSAYDFVFTSIEGQPLPLSDFEGKVVLLVNTASRCGFTPQYEGLQAVWERYRDRGLVVLGVPSNDFGGQEPGSEAEIKQFCEVNFNVDFPLTSK 123
BLAST of mRNA_L-elsbetiae_contig794.16909.1 vs. uniprot
Match: K9HMA1_9PROT (Glutathione peroxidase n=1 Tax=Caenispirillum salinarum AK4 TaxID=1238182 RepID=K9HMA1_9PROT) HSP 1 Score: 109 bits (273), Expect = 2.190e-26 Identity = 59/108 (54.63%), Postives = 70/108 (64.81%), Query Frame = 1
Query: 313 AGSKSAETGPAMPVGSALRFE-TIVDGKPMVPEDFEGNAVLVVNTASLCGLTPQLKELELVHKRFRDEGLIVLGVPSNDFGGQEPWEEHKIKEFYAKDHGVTFPLTAK 633
AG A A GSA FE +DG P+ DF G AVLVVNTAS CG TPQ ++L+ V +++RD GL+VLGVPSNDFGGQEP E +IK+F V FPLT K
Sbjct: 15 AGGLFAANAQAAGQGSAHDFEFRTIDGAPLPMNDFAGKAVLVVNTASECGFTPQYEQLQAVWQKYRDRGLVVLGVPSNDFGGQEPGTEAEIKDFCETAFSVDFPLTEK 122
BLAST of mRNA_L-elsbetiae_contig794.16909.1 vs. uniprot
Match: A0A6N7FAE6_9PROT (Glutathione peroxidase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6N7FAE6_9PROT) HSP 1 Score: 108 bits (270), Expect = 2.360e-26 Identity = 52/86 (60.47%), Postives = 67/86 (77.91%), Query Frame = 1
Query: 376 TIVDGKPMVPEDFEGNAVLVVNTASLCGLTPQLKELELVHKRFRDEGLIVLGVPSNDFGGQEPWEEHKIKEFYAKDHGVTFPLTAK 633
T +DG+P+ DF+G AVLVVNTAS CGLTPQ LE + + +RD+GL+VLGVPSNDFG QEP E +I+EF A ++ V+FP+TAK
Sbjct: 9 TSIDGQPLNMADFKGKAVLVVNTASRCGLTPQYAGLESLWQGYRDKGLVVLGVPSNDFGEQEPGGESEIREFCAANYQVSFPMTAK 94
BLAST of mRNA_L-elsbetiae_contig794.16909.1 vs. uniprot
Match: A0A858R576_9PROT (Glutathione peroxidase n=1 Tax=Rhodospirillaceae bacterium B3 TaxID=2728875 RepID=A0A858R576_9PROT) HSP 1 Score: 108 bits (269), Expect = 5.550e-26 Identity = 50/87 (57.47%), Postives = 66/87 (75.86%), Query Frame = 1
Query: 376 TIVDGKPMVPEDFEGNAVLVVNTASLCGLTPQLKELELVHKRFRDEGLIVLGVPSNDFGGQEPWEEHKIKEFYAKDHGVTFPLTAKV 636
T ++G P+ ++G AVLVVNTASLCG TPQ + L+ + + +RD+GL+VLGVPSNDFGGQEP E +IKEF A + + FP+TAKV
Sbjct: 31 TAIEGGPLPLSGYKGKAVLVVNTASLCGYTPQYEGLQALWQAYRDKGLVVLGVPSNDFGGQEPGSESQIKEFCAVNFAIDFPMTAKV 117
BLAST of mRNA_L-elsbetiae_contig794.16909.1 vs. uniprot
Match: UPI0015D50626 (glutathione peroxidase n=1 Tax=Azospirillum oleiclasticum TaxID=2735135 RepID=UPI0015D50626) HSP 1 Score: 107 bits (268), Expect = 9.140e-26 Identity = 54/106 (50.94%), Postives = 69/106 (65.09%), Query Frame = 1
Query: 316 GSKSAETGPAMPVGSALRFETIVDGKPMVPEDFEGNAVLVVNTASLCGLTPQLKELELVHKRFRDEGLIVLGVPSNDFGGQEPWEEHKIKEFYAKDHGVTFPLTAK 633
G+ A + PA P T +DGKPM D+ G A+LVVNTAS CG TPQ K L+ + +R+RD GL+V+GVPSNDFGGQEP + +IK+F + V FPL K
Sbjct: 17 GASPAMSAPATPYDVTF---TAIDGKPMPLADYRGKALLVVNTASQCGFTPQYKGLQALWERYRDRGLVVIGVPSNDFGGQEPGQAEEIKQFCETTYRVDFPLADK 119
BLAST of mRNA_L-elsbetiae_contig794.16909.1 vs. uniprot
Match: A0A7X1ZFX3_9PROT (Glutathione peroxidase n=1 Tax=Roseospira navarrensis TaxID=140058 RepID=A0A7X1ZFX3_9PROT) HSP 1 Score: 107 bits (268), Expect = 1.340e-25 Identity = 53/98 (54.08%), Postives = 66/98 (67.35%), Query Frame = 1
Query: 340 PAMPVGSALRFETIVDGKPMVPEDFEGNAVLVVNTASLCGLTPQLKELELVHKRFRDEGLIVLGVPSNDFGGQEPWEEHKIKEFYAKDHGVTFPLTAK 633
PA P F T +DG+P+ E F G AVLVVNTAS CG T Q L+ V +++RD GL+VLGVPSNDFG QEP +E +IKEF + + FP+TAK
Sbjct: 35 PATPSAHDFTF-TSIDGEPLPMEQFAGKAVLVVNTASRCGFTKQYDGLQAVWEKYRDRGLVVLGVPSNDFGSQEPGDEEQIKEFCTVNFNINFPMTAK 131
BLAST of mRNA_L-elsbetiae_contig794.16909.1 vs. uniprot
Match: A0A2S5N0L6_HYPSQ (Glutathione peroxidase n=2 Tax=unclassified Hyphomicrobium TaxID=2619925 RepID=A0A2S5N0L6_HYPSQ) HSP 1 Score: 107 bits (267), Expect = 1.800e-25 Identity = 53/95 (55.79%), Postives = 66/95 (69.47%), Query Frame = 1
Query: 355 GSALRFE-TIVDGKPMVPEDFEGNAVLVVNTASLCGLTPQLKELELVHKRFRDEGLIVLGVPSNDFGGQEPWEEHKIKEFYAKDHGVTFPLTAKV 636
GSA F T +DGKPM DF+G AVLVVNTAS CG T Q K L+ +++++ +G +V+GVPSNDFG QEP +IKEF G+TFPLT KV
Sbjct: 31 GSAYDFSFTSIDGKPMPLSDFKGKAVLVVNTASFCGFTQQYKGLQALYEKYEAKGFVVVGVPSNDFGAQEPGSATQIKEFCEGAFGITFPLTEKV 125
BLAST of mRNA_L-elsbetiae_contig794.16909.1 vs. uniprot
Match: A0A2G2HW71_9PROT (Glutathione peroxidase n=1 Tax=Robiginitomaculum sp. TaxID=2030823 RepID=A0A2G2HW71_9PROT) HSP 1 Score: 107 bits (266), Expect = 2.120e-25 Identity = 50/94 (53.19%), Postives = 69/94 (73.40%), Query Frame = 1
Query: 355 GSALRFETI-VDGKPMVPEDFEGNAVLVVNTASLCGLTPQLKELELVHKRFRDEGLIVLGVPSNDFGGQEPWEEHKIKEFYAKDHGVTFPLTAK 633
GSA F+ + +DG+P+ + + G A+L+VNTAS CG TPQ + LE++ K + D+GL+VLGVPSNDFGGQEP E +IKEF + + FP+TAK
Sbjct: 35 GSAHDFDFVSIDGEPLPLKQYAGKAILLVNTASKCGFTPQYEGLEILSKTYADKGLVVLGVPSNDFGGQEPGTEAEIKEFCEVNFNINFPMTAK 128 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig794.16909.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig794.16909.1 >prot_L-elsbetiae_contig794.16909.1 ID=prot_L-elsbetiae_contig794.16909.1|Name=mRNA_L-elsbetiae_contig794.16909.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=215bp LRDTAVSAAAASVTTASCSPHRRFLSAATVSAPPSPPPPPPPLPSLLPSLback to top mRNA from alignment at L-elsbetiae_contig794:16697..18556- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig794.16909.1 ID=mRNA_L-elsbetiae_contig794.16909.1|Name=mRNA_L-elsbetiae_contig794.16909.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1860bp|location=Sequence derived from alignment at L-elsbetiae_contig794:16697..18556- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig794:16697..18556- >mRNA_L-elsbetiae_contig794.16909.1 ID=mRNA_L-elsbetiae_contig794.16909.1|Name=mRNA_L-elsbetiae_contig794.16909.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1290bp|location=Sequence derived from alignment at L-elsbetiae_contig794:16697..18556- (Laminarionema elsbetiae ELsaHSoW15)back to top |