|
Homology
BLAST of mRNA_L-elsbetiae_contig787.16823.1 vs. uniprot
Match: D8LS01_ECTSI (UBC core domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS01_ECTSI) HSP 1 Score: 276 bits (705), Expect = 1.610e-89 Identity = 139/144 (96.53%), Postives = 140/144 (97.22%), Query Frame = 1
Query: 292 MAASNLPRRIVKETQRLLAEPVPGISATPYEDNLRYFNVVITGPEQSPYESGSFKLELFLPSDYPMAPPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQATQALLSAPNPDDPLANDVAEMWKSNEAQALQT 723
MAASNLPRRIVKETQRLLAEPVPGISATPYEDNLRYFNVVITGPEQSPYE GSFKLELFLPSDYPMAPPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQA LLSAPNPDDPLANDVAEMWK+NEAQALQT
Sbjct: 1 MAASNLPRRIVKETQRLLAEPVPGISATPYEDNLRYFNVVITGPEQSPYEHGSFKLELFLPSDYPMAPPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQA---LLSAPNPDDPLANDVAEMWKTNEAQALQT 141
BLAST of mRNA_L-elsbetiae_contig787.16823.1 vs. uniprot
Match: A0A024GCI7_9STRA (UBC core domain-containing protein n=3 Tax=Oomycota TaxID=4762 RepID=A0A024GCI7_9STRA) HSP 1 Score: 261 bits (668), Expect = 3.030e-84 Identity = 129/151 (85.43%), Postives = 140/151 (92.72%), Query Frame = 1
Query: 298 ASNLPRRIVKETQRLLAEPVPGISATPYEDNLRYFNVVITGPEQSPYESGSFKLELFLPSDYPMAPPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQATQALLSAPNPDDPLANDVAEMWKSNEAQALQTAREWTQRLA 750
ASNLPRRIVKETQRLLAEPVPGISATPYEDNLRYF VVI GP+ SPYE+G FKLELFLP+DYPM+PPKVRFLT++YHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQA LLSAPNPDDPLANDVAE WKS+EA A++TA +WT+R A
Sbjct: 5 ASNLPRRIVKETQRLLAEPVPGISATPYEDNLRYFQVVIAGPQTSPYENGIFKLELFLPADYPMSPPKVRFLTRLYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQA---LLSAPNPDDPLANDVAEHWKSDEAGAVRTAADWTRRFA 152
BLAST of mRNA_L-elsbetiae_contig787.16823.1 vs. uniprot
Match: H3G9K8_PHYRM (UBC core domain-containing protein n=24 Tax=Oomycota TaxID=4762 RepID=H3G9K8_PHYRM) HSP 1 Score: 256 bits (655), Expect = 2.530e-82 Identity = 129/151 (85.43%), Postives = 137/151 (90.73%), Query Frame = 1
Query: 298 ASNLPRRIVKETQRLLAEPVPGISATPYEDNLRYFNVVITGPEQSPYESGSFKLELFLPSDYPMAPPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQATQALLSAPNPDDPLANDVAEMWKSNEAQALQTAREWTQRLA 750
AS LPRRIVKETQRLLAEPV GISATPYEDNLRYF VVI GP+ SPYE+G FKLELFLPSDYPMAPPKVRFLT+IYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQA LLSAPNPDDPLANDVA+ WK++EA A+Q A EWT+R A
Sbjct: 2 ASALPRRIVKETQRLLAEPVAGISATPYEDNLRYFQVVIAGPQSSPYENGIFKLELFLPSDYPMAPPKVRFLTRIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQA---LLSAPNPDDPLANDVADHWKTDEAGAVQMAAEWTRRYA 149
BLAST of mRNA_L-elsbetiae_contig787.16823.1 vs. uniprot
Match: A0A7S3RBI3_9SPIT (Hypothetical protein (Fragment) n=2 Tax=Choreotrichia TaxID=141411 RepID=A0A7S3RBI3_9SPIT) HSP 1 Score: 253 bits (646), Expect = 8.130e-81 Identity = 125/153 (81.70%), Postives = 136/153 (88.89%), Query Frame = 1
Query: 298 ASNLPRRIVKETQRLLAEPVPGISATPYEDNLRYFNVVITGPEQSPYESGSFKLELFLPSDYPMAPPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQATQALLSAPNPDDPLANDVAEMWKSNEAQALQTAREWTQRLARA 756
AS LPRRIVKETQRLL+EP PGISATPY DNLRYFNV+I GP+ SPYE G FKLELFLP +YPMAPPKVRFLTK++HPNIDKLGRICLDILKDKWSPALQIRTVLLSIQA LLSAPNPDDPLANDVAE+WK NE +AL+ A+ WTQ+ A A
Sbjct: 9 ASALPRRIVKETQRLLSEPAPGISATPYTDNLRYFNVIIQGPQGSPYEGGIFKLELFLPEEYPMAPPKVRFLTKMFHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQA---LLSAPNPDDPLANDVAELWKRNEPKALEEAKTWTQQYATA 158
BLAST of mRNA_L-elsbetiae_contig787.16823.1 vs. uniprot
Match: A0A484ED03_BRELC (UBC core domain-containing protein n=13 Tax=Oomycota TaxID=4762 RepID=A0A484ED03_BRELC) HSP 1 Score: 253 bits (645), Expect = 8.220e-81 Identity = 126/151 (83.44%), Postives = 135/151 (89.40%), Query Frame = 1
Query: 298 ASNLPRRIVKETQRLLAEPVPGISATPYEDNLRYFNVVITGPEQSPYESGSFKLELFLPSDYPMAPPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQATQALLSAPNPDDPLANDVAEMWKSNEAQALQTAREWTQRLA 750
A+ LPRRIVKETQRLLAEPV GISATPYEDNLRYF VVI GP+ SPYE+G FKLELFLP DYPMAPPKVRFLT+IYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQA LLSAPNPDDPLANDVA+ WK++E A+ TA EWT+R A
Sbjct: 2 ATTLPRRIVKETQRLLAEPVAGISATPYEDNLRYFQVVIAGPQSSPYENGIFKLELFLPVDYPMAPPKVRFLTRIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQA---LLSAPNPDDPLANDVADHWKTDEVGAVHTAAEWTRRYA 149
BLAST of mRNA_L-elsbetiae_contig787.16823.1 vs. uniprot
Match: A0A139B0U7_GONPJ (Ubiquitin-conjugating enzyme n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139B0U7_GONPJ) HSP 1 Score: 253 bits (645), Expect = 8.500e-81 Identity = 124/150 (82.67%), Postives = 133/150 (88.67%), Query Frame = 1
Query: 304 NLPRRIVKETQRLLAEPVPGISATPYEDNLRYFNVVITGPEQSPYESGSFKLELFLPSDYPMAPPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQATQALLSAPNPDDPLANDVAEMWKSNEAQALQTAREWTQRLAR 753
NLP+RIVKET+RLLAEP PGISA P+EDNLRYF+VVI GP SPY+ G FKLELFLP DYPMAPPKVRFLT+IYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQA LLSAPNPDDPLANDVA+ WK NE ALQTAREWT + A+
Sbjct: 4 NLPKRIVKETERLLAEPAPGISAQPHEDNLRYFDVVIAGPTHSPYDGGMFKLELFLPDDYPMAPPKVRFLTRIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQA---LLSAPNPDDPLANDVAQQWKENEKLALQTAREWTGKFAK 150
BLAST of mRNA_L-elsbetiae_contig787.16823.1 vs. uniprot
Match: A0A199W8B9_ANACO (Ubiquitin-conjugating enzyme E2 36 n=1 Tax=Ananas comosus TaxID=4615 RepID=A0A199W8B9_ANACO) HSP 1 Score: 251 bits (642), Expect = 3.160e-80 Identity = 125/161 (77.64%), Postives = 142/161 (88.20%), Query Frame = 1
Query: 292 MAASNLPRRIVKETQRLLAEPVPGISATPYEDNLRYFNVVITGPEQSPYESGSFKLELFLPSDYPMAPPKVRFLTKIYHPNIDK----LGRICLDILKDKWSPALQIRTVLLSIQATQALLSAPNPDDPLANDVAEMWKSNEAQALQTAREWTQRLARASA 762
MA SNLPRRI+KETQRLL+EP PGI ATPYE+N+RYFNV+I GPEQSPYE G FKLELFLP +YPMAPPKVRFLTKIYHPNIDK LGRICLDILKDKWSPALQIRTVLLSIQA LLSAPNPDDPL++++A+ WK+NEA+A++TA+EWT+ A A A
Sbjct: 1 MANSNLPRRIIKETQRLLSEPAPGIIATPYEENMRYFNVMILGPEQSPYEGGVFKLELFLPEEYPMAPPKVRFLTKIYHPNIDKASSKLGRICLDILKDKWSPALQIRTVLLSIQA---LLSAPNPDDPLSDNIAKHWKANEAEAVETAKEWTRLYATAGA 158
BLAST of mRNA_L-elsbetiae_contig787.16823.1 vs. uniprot
Match: A0A7S2FBQ7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FBQ7_9STRA) HSP 1 Score: 251 bits (641), Expect = 3.910e-80 Identity = 125/157 (79.62%), Postives = 141/157 (89.81%), Query Frame = 1
Query: 292 MAASN--LPRRIVKETQRLLAEPVPGISATPYEDNLRYFNVVITGPEQSPYESGSFKLELFLPSDYPMAPPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQATQALLSAPNPDDPLANDVAEMWKSNEAQALQTAREWTQRLARA 756
MAA++ LPRRIVKETQRL+AEPVPGISATPYEDNLRYFN+ + GP SP+ESG F+LELFLP+DYPMAPPKVRFLTKIYHPN+DKLGRICL+ILKDKWSPALQIRTVLLSIQA LLSAPNPDDPL N VA++WK++EA AL TA EWTQ+ A+A
Sbjct: 1 MAAADGGLPRRIVKETQRLMAEPVPGISATPYEDNLRYFNIALAGPADSPFESGVFRLELFLPADYPMAPPKVRFLTKIYHPNVDKLGRICLNILKDKWSPALQIRTVLLSIQA---LLSAPNPDDPLDNGVADVWKNDEATALATAAEWTQQYAQA 154
BLAST of mRNA_L-elsbetiae_contig787.16823.1 vs. uniprot
Match: A0A7S4B500_CHRCT (Hypothetical protein n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B500_CHRCT) HSP 1 Score: 250 bits (639), Expect = 1.100e-79 Identity = 121/152 (79.61%), Postives = 135/152 (88.82%), Query Frame = 1
Query: 301 SNLPRRIVKETQRLLAEPVPGISATPYEDNLRYFNVVITGPEQSPYESGSFKLELFLPSDYPMAPPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQATQALLSAPNPDDPLANDVAEMWKSNEAQALQTAREWTQRLARA 756
S LPRRI+KETQRLL EPVPGISA+PY+DNLRYFNV+I GP SPYE G FKLELFLP +YPMAPPKVRF+T++YHPNID++GRICLDILKDKWSPALQIRTVLLSIQA LLSAPNPDDPLANDVAE WK +E A+QTAREWT++ A A
Sbjct: 15 SLLPRRIIKETQRLLTEPVPGISASPYKDNLRYFNVIIAGPSSSPYEGGIFKLELFLPEEYPMAPPKVRFMTRMYHPNIDRIGRICLDILKDKWSPALQIRTVLLSIQA---LLSAPNPDDPLANDVAEQWKVDEPAAIQTAREWTKKYAAA 163
BLAST of mRNA_L-elsbetiae_contig787.16823.1 vs. uniprot
Match: A0A388KXK6_CHABU (UBC core domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KXK6_CHABU) HSP 1 Score: 249 bits (637), Expect = 1.680e-79 Identity = 122/150 (81.33%), Postives = 134/150 (89.33%), Query Frame = 1
Query: 301 SNLPRRIVKETQRLLAEPVPGISATPYEDNLRYFNVVITGPEQSPYESGSFKLELFLPSDYPMAPPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQATQALLSAPNPDDPLANDVAEMWKSNEAQALQTAREWTQRLA 750
SNLPRRI+KETQRLL+EP PGISA+P E+NLRYFNV+I GP QSPYE G FKLELFLP DYPMAPPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQA LLSAPNPDDPLA ++A+ WK+NE +A+ TAREWT+ A
Sbjct: 7 SNLPRRIIKETQRLLSEPAPGISASPSEENLRYFNVMILGPNQSPYEGGLFKLELFLPEDYPMAPPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQA---LLSAPNPDDPLAENIAKHWKTNETEAVATAREWTRMYA 153
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Taxonomic scope | Eukaryota |
Seed ortholog score | 278.1 |
Seed ortholog evalue | 2.6e-72 |
Seed eggNOG ortholog | 2880.D8LS01 |
Preferred name | UBE2N |
KEGG ko | ko:K10580 |
KEGG Pathway | ko04120,ko04624,map04120,map04624 |
Hectar predicted targeting category | other localisation |
GOs | GO:0000151,GO:0000165,GO:0000187,GO:0000209,GO:0000724,GO:0000725,GO:0000726,GO:0000729,GO:0000902,GO:0000904,GO:0001650,GO:0001932,GO:0001934,GO:0002218,GO:0002221,GO:0002253,GO:0002376,GO:0002429,GO:0002682,GO:0002684,GO:0002753,GO:0002757,GO:0002758,GO:0002764,GO:0002768,GO:0003674,GO:0003824,GO:0004842,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006282,GO:0006301,GO:0006302,GO:0006303,GO:0006310,GO:0006325,GO:0006355,GO:0006464,GO:0006468,GO:0006508,GO:0006511,GO:0006513,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006952,GO:0006974,GO:0006979,GO:0006996,GO:0007154,GO:0007165,GO:0007166,GO:0007254,GO:0007275,GO:0007346,GO:0007399,GO:0007409,GO:0007412,GO:0007416,GO:0007528,GO:0007610,GO:0007625,GO:0007626,GO:0007629,GO:0007630,GO:0008104,GO:0008150,GO:0008152,GO:0008344,GO:0008594,GO:0009056,GO:0009057,GO:0009314,GO:0009411,GO:0009416,GO:0009605,GO:0009607,GO:0009617,GO:0009628,GO:0009653,GO:0009794,GO:0009888,GO:0009889,GO:0009893,GO:0009966,GO:0009967,GO:0009987,GO:0010015,GO:0010033,GO:0010035,GO:0010038,GO:0010039,GO:0010053,GO:0010468,GO:0010556,GO:0010562,GO:0010604,GO:0010638,GO:0010646,GO:0010647,GO:0010941,GO:0010942,GO:0010992,GO:0010994,GO:0016043,GO:0016310,GO:0016567,GO:0016569,GO:0016570,GO:0016574,GO:0016740,GO:0019219,GO:0019220,GO:0019221,GO:0019222,GO:0019538,GO:0019725,GO:0019787,GO:0019899,GO:0019941,GO:0021700,GO:0022008,GO:0022607,GO:0022622,GO:0023014,GO:0023051,GO:0023052,GO:0023056,GO:0030030,GO:0030154,GO:0030163,GO:0030182,GO:0030522,GO:0030534,GO:0031056,GO:0031058,GO:0031098,GO:0031175,GO:0031323,GO:0031325,GO:0031326,GO:0031347,GO:0031349,GO:0031371,GO:0031372,GO:0031396,GO:0031398,GO:0031399,GO:0031401,GO:0031624,GO:0031625,GO:0031974,GO:0031981,GO:0032147,GO:0032182,GO:0032268,GO:0032270,GO:0032446,GO:0032501,GO:0032502,GO:0032872,GO:0032874,GO:0032879,GO:0032880,GO:0032989,GO:0032990,GO:0032991,GO:0033036,GO:0033043,GO:0033044,GO:0033182,GO:0033365,GO:0033554,GO:0033674,GO:0034097,GO:0034613,GO:0034622,GO:0034641,GO:0034644,GO:0035370,GO:0035556,GO:0035872,GO:0036211,GO:0040007,GO:0040019,GO:0042221,GO:0042325,GO:0042327,GO:0042461,GO:0042493,GO:0042592,GO:0042742,GO:0043085,GO:0043122,GO:0043123,GO:0043130,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043405,GO:0043406,GO:0043408,GO:0043410,GO:0043412,GO:0043549,GO:0043632,GO:0043933,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044389,GO:0044390,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044452,GO:0044464,GO:0045088,GO:0045089,GO:0045739,GO:0045787,GO:0045859,GO:0045860,GO:0045931,GO:0045935,GO:0045937,GO:0045977,GO:0045995,GO:0046328,GO:0046330,GO:0046483,GO:0046530,GO:0046686,GO:0048364,GO:0048468,GO:0048471,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0048589,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0050776,GO:0050778,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050808,GO:0050851,GO:0050852,GO:0050896,GO:0051052,GO:0051054,GO:0051090,GO:0051091,GO:0051092,GO:0051094,GO:0051124,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051174,GO:0051179,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051252,GO:0051258,GO:0051276,GO:0051338,GO:0051347,GO:0051403,GO:0051438,GO:0051443,GO:0051603,GO:0051641,GO:0051704,GO:0051707,GO:0051716,GO:0051726,GO:0060074,GO:0060255,GO:0060341,GO:0061057,GO:0061564,GO:0061630,GO:0061631,GO:0061650,GO:0061659,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070302,GO:0070304,GO:0070423,GO:0070498,GO:0070534,GO:0070555,GO:0070647,GO:0070727,GO:0070887,GO:0070914,GO:0071214,GO:0071310,GO:0071345,GO:0071347,GO:0071478,GO:0071482,GO:0071704,GO:0071840,GO:0071900,GO:0071902,GO:0072347,GO:0072665,GO:0080090,GO:0080134,GO:0080135,GO:0090304,GO:0090558,GO:0090627,GO:0098542,GO:0099402,GO:0104004,GO:0120036,GO:0120039,GO:0120113,GO:0140096,GO:1901360,GO:1901564,GO:1901565,GO:1901575,GO:1902275,GO:1902494,GO:1902531,GO:1902533,GO:1902914,GO:1902916,GO:1903320,GO:1903322,GO:1903506,GO:1903827,GO:1905269,GO:1905392,GO:1990234,GO:2000008,GO:2000026,GO:2000112,GO:2001020,GO:2001022,GO:2001141,GO:2001252 |
EggNOG free text desc. | protein modification by small protein conjugation |
EggNOG OGs | COG5078@1,KOG0417@2759 |
EC | 2.3.2.23 |
COG Functional cat. | O |
Best tax level | Eukaryota |
Best eggNOG OG | NA|NA|NA |
BRITE | ko00000,ko00001,ko01000,ko03400,ko04121 |
Ec32 ortholog description | Ubiquitin-conjugating enzyme/RWD-like |
Ec32 ortholog | Ec-08_001540.1 |
Exons | 7 |
Model size | 1125 |
Cds size | 474 |
Stop | 1 |
Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816870.5464227-UTR-L-elsbetiae_contig787:3073..3433 | 1622816870.5464227-UTR-L-elsbetiae_contig787:3073..3433 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig787 3074..3433 - |
1691683875.4257276-UTR-L-elsbetiae_contig787:3073..3433 | 1691683875.4257276-UTR-L-elsbetiae_contig787:3073..3433 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig787 3074..3433 - |
1622816870.6360095-UTR-L-elsbetiae_contig787:10289..10487 | 1622816870.6360095-UTR-L-elsbetiae_contig787:10289..10487 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig787 10290..10487 - |
1691683875.5104954-UTR-L-elsbetiae_contig787:10289..10487 | 1691683875.5104954-UTR-L-elsbetiae_contig787:10289..10487 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig787 10290..10487 - |
1622816870.6479864-UTR-L-elsbetiae_contig787:10946..11039 | 1622816870.6479864-UTR-L-elsbetiae_contig787:10946..11039 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig787 10947..11039 - |
1691683875.523147-UTR-L-elsbetiae_contig787:10946..11039 | 1691683875.523147-UTR-L-elsbetiae_contig787:10946..11039 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig787 10947..11039 - |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816870.561851-CDS-L-elsbetiae_contig787:3433..3474 | 1622816870.561851-CDS-L-elsbetiae_contig787:3433..3474 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig787 3434..3474 - |
1691683875.4383574-CDS-L-elsbetiae_contig787:3433..3474 | 1691683875.4383574-CDS-L-elsbetiae_contig787:3433..3474 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig787 3434..3474 - |
1622816870.5750666-CDS-L-elsbetiae_contig787:5396..5492 | 1622816870.5750666-CDS-L-elsbetiae_contig787:5396..5492 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig787 5397..5492 - |
1691683875.4476802-CDS-L-elsbetiae_contig787:5396..5492 | 1691683875.4476802-CDS-L-elsbetiae_contig787:5396..5492 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig787 5397..5492 - |
1622816870.5861628-CDS-L-elsbetiae_contig787:6956..7083 | 1622816870.5861628-CDS-L-elsbetiae_contig787:6956..7083 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig787 6957..7083 - |
1691683875.458615-CDS-L-elsbetiae_contig787:6956..7083 | 1691683875.458615-CDS-L-elsbetiae_contig787:6956..7083 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig787 6957..7083 - |
1622816870.5995145-CDS-L-elsbetiae_contig787:7306..7365 | 1622816870.5995145-CDS-L-elsbetiae_contig787:7306..7365 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig787 7307..7365 - |
1691683875.469975-CDS-L-elsbetiae_contig787:7306..7365 | 1691683875.469975-CDS-L-elsbetiae_contig787:7306..7365 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig787 7307..7365 - |
1622816870.6129842-CDS-L-elsbetiae_contig787:8025..8112 | 1622816870.6129842-CDS-L-elsbetiae_contig787:8025..8112 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig787 8026..8112 - |
1691683875.482476-CDS-L-elsbetiae_contig787:8025..8112 | 1691683875.482476-CDS-L-elsbetiae_contig787:8025..8112 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig787 8026..8112 - |
1622816870.6249776-CDS-L-elsbetiae_contig787:10225..10289 | 1622816870.6249776-CDS-L-elsbetiae_contig787:10225..10289 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig787 10226..10289 - |
1691683875.494147-CDS-L-elsbetiae_contig787:10225..10289 | 1691683875.494147-CDS-L-elsbetiae_contig787:10225..10289 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig787 10226..10289 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig787.16823.1 >prot_L-elsbetiae_contig787.16823.1 ID=prot_L-elsbetiae_contig787.16823.1|Name=mRNA_L-elsbetiae_contig787.16823.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=158bp
MAASNLPRRIVKETQRLLAEPVPGISATPYEDNLRYFNVVITGPEQSPYE SGSFKLELFLPSDYPMAPPKVRFLTKIYHPNIDKLGRICLDILKDKWSPA LQIRTVLLSIQATQALLSAPNPDDPLANDVAEMWKSNEAQALQTAREWTQ RLARASA* back to topmRNA from alignment at L-elsbetiae_contig787:3074..11039- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig787.16823.1 ID=mRNA_L-elsbetiae_contig787.16823.1|Name=mRNA_L-elsbetiae_contig787.16823.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7966bp|location=Sequence derived from alignment at L-elsbetiae_contig787:3074..11039- (Laminarionema elsbetiae ELsaHSoW15) AGAAAGGGCACACGTCACAGCTTGTACCCCCAACTCGGCACCACCGATTT
CAGGTTACCCTCCACCTTCTTCGGCCGGCGGTAGAGAGCAAAGGTGCGTG
TCGCGCTTTCCGCGGAACAGCATCCACACCAAAGCCTGTACGAAGGAATG
CTGCTACTGCTGCTGTACGCTCTTCGAGAGGAGCATCAAATTAGAGGCAG
CGGAGAAGAGAGAGGCCTAGACGAAATGAAATGGTATGCATCCCATTTTT
GAGGGAGAGGCGAGAGGGCTTGTTACTGCTCTCTGCTGCAGATATTTGAA
TGCTAGGAACACTTTTTCTCCTTGGAAAGAGGGGAGAGGGGGCATCATTG
CTACATACCCCTCCACCGCCGTTCTCGCAGTAACGCGACCGCGGTGCTGT
TTTGCATCACCGAGGCAAAAAAACGAGCCACGTCTTACTCGTACGCTATG
CGGTGCCTTGATATTTCCACCTGGTTTCAACGGAGGATTATGTAATGTCG
ATGCATGATGGAAATAATGAAATAATCCCCCGTCTGCTGCACGTGTCACC
AGAAAAGGAGCCGTACTCCAGGTAAAGGGGCAGCTGCAGCAGCTAGTCGG
ATTGCCGACGAGGACCAGGCGAAGCCAAGGAGGAGAGCGTTAGACATCGC
GGCGTCAGCACCAAGGGCACACAGCGCGGCCGGGGTAAATCAGTATCCGC
TCCACTCTTCGTAGCGCTCGATAGGAGTCAGTCAGTGAGCCAGTCTCAGG
ATGGCGGCTAGCAATCTTCCCCGACGGATCGTCAAGGAAACTCAGAGGCT
GCTTGCCGAGCCAGGTGTGGGCGCGTGTGTTGGTTTTGTGCATGCGTGCG
TGTTTTGCTCGTGTGCATGGCATGCTCTCTGCCGCCCCCCGGTTTTGCCG
CCGTCCTCTTCACAATGGCTATCGTCCTTGTGGGTACAATTGCAGAGGAG
TAAACCTAATTTATGTATCGCGGCTCTGGCGTAACTTTCCTCATCTTGGC
TGGGCGCTCATATGTACCCTGCTATTGTTCACGATACATATGTAGTGTTG
TGACGTGGGGTGCTTGCTGCTCAGATTGTTTCGGTATGGAGCAGGACGGC
TTCTTTTTAATTGATGTGTACAAATGTCAGCAGTCTACTTACGTGCGTCC
AGTCTGCGACAAAGTCGTTCCAGAGGGACTGTTGTAGGCATACATACTAA
CTCCCCTTTTCCGGTCCAAGGTATACTCGTACAGAATCCGGAACCCGCTC
TCACAGACAATACATTTAGATGCCGATACGGGAGCTGTAGTCGTTATGAG
CAGCCCGGCTGTTTGGGCTTTATGTCCCCTTAAGCTCGGAACAGCTTTGA
ACAGCTGCTGTTTGCTGGGCTTGAACAGCCTCAAGAGCTGCTTTTGACAA
ACGCCCGTTTTTCAGCCTCTTCCAGAACCAGCTTAACCAGCTGCCGTTGA
CACACGTTGTTCAGCTCTTTCGCGGCAAACTTACAGCGGTCGCAACTCGG
AACACCAATCAACAGCAGTCAACAAGTCATTTAGCTGTTCTCTCTTGCTG
TTTTTAATTGATGCTGTTTTTGTGCTGTTTCCGTTAAACTTTCTGGCGAA
CACACACAACAAACACACGCACACGCACAAGCCGGCGACATTTTTTCGCC
GGCTTTTTGTGTTTCCTCCCCCCAGTGTTTAACTATATTTGAAATCGTTG
AACACGCTCCAAGCTCCTCCAAGTCGGGCAGAACAGCATGCAGGTATCGG
ACGCTTGGTCTGCTCTCTTGCTTCACCCTCTGGAGTGTTTATCCATGAGC
GACCTCTGAAAGGGGAGTCTTTTAATTTTTACACATGTACTGTCATAAGA
CATGACAACACTGCGAAACCTTTGTATGGTTATCGGGTACAGGGGCCCTA
AATTGTAGCTTCTGAAAAAGGACTTGCAGGTGGGTGGCGTATTTGGTCTT
GCTGGCGCCGTTACCCACACACCAGGCAGGCCTATTCAAAATAAAGCCAC
GACATCCCTGCTGTTCTGTTAGCCCTGGGACGTTTGCTGCTACATAGAGT
ACATATATATGTATGTATATTACGTCCTCGGTGGATTTCCGCCGTTGCTC
TGTAGATGCTCCTCTTGGGTCCTGCTGTAACGTCGTCGTGTTCATCGCGG
AAAAAAGAAGCGTGCGCGTGTGGTTGCGGGCGTGTAGACTACGGCAGGGT
GTGGTACACTATTGTGCCGGTTCACCCTGCGTAAACCCTCGAATATTGCT
GTTCACCAGACTCCTGTGTTGGTCGGACCTAGCTGGGTGTGTGCCGCGGG
AGTTCTAGCTCTTGCAGTCTCGACTTTTTGCTGACCGAGGCTTTTACCGA
GTTGCGATGAACACCGCGGTGCCCCATTCCTCCTTTTTTTTTTTTTGACC
GATTTTAGTGGCGAAACGGATCGCGTGCAGACACTCAAACTGGCGGAATG
GTATTGGAAATATCTCATAAAATAATATTTCCGAAGATAGACGTCCATAT
CGTTCGATATCCTAACCCGCCCTGTCTATGAGTACTGGGATTGCGAGCTT
CAGGAAGAGGCTCAAAAACGTGACCTACCTATAGAGGGGGTCCTGTTCGA
GACTACACACGGTCCCAGTCGTTTGGCGGGGTAGCAAAGAGGAGGGTTGT
GGCACCTTGCCCGATTCATTCGCACAGACAGACCACCGCAGCTGCCTACA
TCTGTACCTGCTTGCCTGCCTAGGCACAGACAGCACCGGCGACCCATTTT
CTCGCGGCATGTGCATCGGTCTACAGATCTAATTATCAGCCTATTGTACG
GCACGATTTCTCCTTCCTCCGCATTTGATAGCTTGCTGCGCCTGCTGTCG
AATTTTGTCCGCTTCGATAGAACAACTCCCAACCACCTGCCTACCCACGT
ACCCCCCACACGACGTGACGCAAACAGTACCTGGCATTAGCGCCACCCCT
TACGAAGACAACCTGCGCTACTTCAACGTGGTTATCACCGGACCGGAGCA
GTCGCCGTACGAAAGTGAGTGTGCGTGTGTGCGCGAGAGATAAACAGAGG
GAGATATAAGAGAGGTAACGTGTGTTTTGTGTCTTTTTGAAGCGCTTGGT
GTACATAAAACAACGGTTGGTGGCTTGGTTTTCTCGGCAGCGCGTGGTTG
ATACTTCCATGTTTCGAGCGGGCTGGGGGGGGGCGGACGAAGTGTGTGTG
TGTGTGTGTGGGGTTAGCCTTTTCCTTGATCGCTTTCCTACGCACCTCAC
GGGGAGCTGGGTGTACCGTACACTGACTGCTGTGTGGTGTCGTGCACAAG
AGCCGCGCACCGATGATAAAGAGCGTGGTGGCGCATCGCCGACGCTTCTT
TTTGCTGTGTGCGTTCATCGTACGGGAAACGGAATTGCCTCATTAAAACC
GGGCCAGCGTTTTGTCCTGCACGTGGTGCAGCCCTTCGAAGGCTGTAACC
CTTTCTAAGGTTCAAACCTCGGGTCACACGCGAGTAGCATACAAACAAGA
AGTCCTCCCCCCTGCCCGCCTCCTGTTACGAAACCAAATTAAGGGCTTTA
CGATTTATGTCGTGCATCTATCATTGGTTAGTTGTGTCGGTTAGGCACCG
GAAGAACAGCGTTACCCACATATGTTGCTGATATGATTCTGTGTTTTGAT
TGTGTGGTTTGGTTCTGGGTGCAGGTGGGTCATTCAAGCTGGAGCTCTTC
CTGCCGTCGGACTACCCCATGGCGCCTCCCAAGGTGAGCGAAATACAGAG
TATTTATCACTGTTCATGATGAGCCTTACCACTTACCGCCTTGCCTCAAG
CTTGTTAGTGGTGGACGTAGTCATATATGTGTTGGTACTCGTGGTCGTGT
GTTGGATTTTGCGGGGTCTGGCGCTCGCCTGCTGCTATATGCGCGCGCTT
TGCTCAACCACGCGCACACACACACACAAGCACGCACCCCACGCACGCAT
ATACAGGTTCGCTTCCTGACAAAAATCTACCATCCAAACATCGACAAGCT
GGGCCGCATCTGCCTCGACATCCTCAAGGACAAGTGGTCCCCTGCCCTCC
AGATCAGGACGGTGCTTCTCAGCATCCAGGCGAGTAAACTAGGCTGGCCG
TCTCGCAAAGGTTAACTATAAATGACAATGGGCACTCGGTTGCCTGTGTC
TGTAACCGCGGAACGGTTACCCGCCGGCTGGGTTATGTGACGGACGCTAG
AACGTACCATTTACTACACGGGTATAGGTCGGACAGTAGTTTTCAGTGAT
TTGTGAAGACCCCGACTTTCAGCAGGCGGACAGAGCTGGCGCATCAGTCG
TCCGTGGATGTACGGATGTTGCTCTCGCCTTGCGATCTGGCCTGCTAGAT
ACGTCTTGCGTAGTTTTCGTTTGCCTTTGGTTTTCTTCGGGCGCGATCGT
GCCTGTGGTGAGGTGCCCACGCCCGCAGTCTTGGCGCCTGTCCCCTGCTC
GTTAGCTGACCAGACGGCTGTCGGAATCTTTACAGTCTCGAGAGGTTTCT
CTCTCCCTGCATGTCCCCTCCCCCGAGTTCTAAGGGGGAATCGCATGACT
CCCTTCGTTGTGTGGTGGCTCTGTGCATGCGTTTTCTCCGTGCGGTGGTT
GTTTGTGTCCGGTGTGTGGTTTGTGCTCATTGGCGGCCCAAGAATGGTCC
GTTGGTTTCCATCGTCTCGGCTTCGTTCAGATTCAGGCCGGATCCTATGG
GGGCCAAATTTTCCACGGAACGGAATTGATGTCCTGGGGCGGGCCCCTGA
ACCGAAAGGGGGGTGTTGGGGCCTCGAACCCCCACGAAATGGAGACACGC
CCTACCATCACCACACCACCCATGAAGTCTCCGGCCATAAATAGCTGACG
GATTGCCACGAAAAAGTTTCAGGCCTACGCTCCATGCTCGTAGGATCCTT
CGCAGCTAGCCCTTGTTGTCAGGCGATTTTTTGGCGGCGAGGATTGGTTG
ATGTTGTGAAAAAAACAGAGATCCGTCTGGCAAAACGTCACACGAAATGT
ACCCCCAAAAACCGTGTTATTTCGCGGACGGATTGGTCACACGAAATGTG
ATTTTCGATCGCACGCCGACTACCTCTCGAGCCACACGAAGCCGATGACC
ACGAAAAAAATATCTCAAGACTCCCACAGGTATGGAGCGTACAGCCAAGA
AGGTCTAGTGTCAGTCCGTGAGCTATGGCCTGAGACAGCAGTGTCGCCGC
GGTTTGGTTGGCGACCCAAAAAGTTCCGTTTGTGTCTCGCCTACTCCTCC
CCCCTCCAAAGGGGGAGCCACGGACCAAAACAAAATTTCCGTTCCGTGGC
AAAATTTCGTCTCCATAAGATCCGGCCTCACGAACGGATCTTTTAGGACT
GGTGAGCTTCCGGCTCGTCAGAGTACGGATTTCGTGCCGCCCTTCTAGAT
AGTTGCCGTTCTTTGCAGTTCTTGACCCTCGTGACTTGCTGATGCCCAAA
TCGTAATGGCTTTTTAGTTCGCGTGTTTTTCCGGAGGCTAGAATATGTAC
GCTTACGAAAAAGTTTTTTTTTTATTTTTTCCTTGTTTTTCTGCAAGCGC
AGGCACTGCTCTCGGCCCCCAACCCAGACGACCCGCTCGCGAACGACGTG
GCGGAAATGTGGAAATCGAACGAGGCGCAGGCGCTGCAGACAGGTGCGTC
TTCAAGCTCCGTGTTGCTCTTCTGTCGCTCCTGTCGTAATTTGGTGTCTT
TTAAGTTTCCGAAGTTCGTGGTTGTGTTTGTTTGTATTGCAGATTTTGAC
CGTGGCCGATCTCAACGCTGGGTAAACAATGAAAACAAAGTAAATGGCGT
CCCCGCTGAAAAGGGGTGTTCTCGGAACGGATAAAGGGCTGGCGTGCGTG
TTTTTCTATTCCTAGCATCGGTACGTGTGTGTGTGTGTGTGTGTGTGTGT
GTGTGCCACTGCCCGCGCTTGTGGTAGACAGTTTGAGCACCTCACAAGAT
CTTCTGTGAGTTTTGTCTGGGGGTGAACGGTCGGTTGTTCGCTCACGCCC
ATACAAACAAATAAAATCGCGACGTGCGCCTCACCCACGTGAACTAGACT
CCCCCACGGCGCCCCTTCCTTTTCGTTCGTTCCTTTTGCGCTCGAGGTGT
GTGTGCAAGCAAAATAGATGTTTTCCCTTACGTATGCAGATAGCTGATCT
TCGGCAAAGATCCGATATATAGTAGACGGGCGTGTCGTTTTGGCGTTGTA
AATCCATTAAGAAGTAACTTTTCCCTGCAAGCAATGCATTTCACCGGCTC
TCGACGGCTGTACCAGCATTTTGATTCTTCCCGAGCGCTGCATTTATTGA
CCCGTTGGGCGGAATTTAAGGGCTTTGCACCGCCTCCCACCTCCTCTCGC
TCTTTCTCTTCTCTCTCTCGAACAACCCCTACTGCTGCACACCCTCCACA
GTTTATTCTCTTCCTCTCTCTTTCTCTCTCTCTCTGTCTCTGTCTCGCTT
TCTATCTCTGTCTCTTGCTCTCTCTCTCTGCGTGGCTTCAGAAAGTCGGA
TTCAAATATGTATCTCCCAGAGCAGTTTGGGTTTTTGAGAACACTATCGC
GAAAAAGACTGCACCGCTTTCGACCTCTCTCTCTCTCTCTCTCTCACACA
CACACACACTCTGTCTCTGTCTCTCTTTGACCACCCCCTACTGCTACACG
CCCTCCACTATTATTCTCCTCTGCCTCTCTCTCTCGTTCCTCTCTGTTCG
TATGAAAAGCAGTTGCATTTTTTTAATTTTGATTCTCGCGTGAACAACTG
CCTCGCCCAAGGGGTCACTCGGCCAGCCGCTTGTTCGTGTCACTGGAGCC
GCACTATATGGTTGGTGCCACTGCCTACGTGCTCCGATCTGTGTGTATTG
TTGCGCACACGTGCGGATACACACTCACGGCAGCGCCGTCAAATACAAAG
AGGGCAGCTTTTATGCTTGCACATCCTTTACATGTGCACTCAACATAAGG
TCGCTGGTGGAAAAGTAGGCATGCGTCTGCCTGCTGTGACGGTTTTTAGT
TCAACTTGAAGTAGTAAACAAGCGAGTCGAACGGTTTTTGATGAAATACT
GATTTTCATTAATGTACTCCAAAGTATACTGATTTTGTGCGAATATATCT
GGGATGTAGTACGCCTACAACAGTCCCTCTGGAACGACTTCTTCACGACT
GTACGTAGACTGCTGACATTTGTATACATGGATTGAAAAACAACTGATGC
TGTTGGTTGAGTGTTTCCATTGCCACACTTATTAGACACGTTGTTCGACA
ACAGGAGGGAGCACTTCATATCGAAGAAAGTAGATATTTATCATTACCTT
GGACTCGCTTTCAATTAAGCGGGGCCGCGTGGGCCGCGTCGAGCGGCCAC
ACCTTGTATTTATATTCATTGGATGGCAGCCATGCGCGAAGGGCTTTCAT
GGAAGTGGTATCTACAGCGGTACGGTGGGTGAGTAGTACATTATGTAGTC
CTTCGCAGACAGCAGACAGACAGACACACACCGAGGCATGCTTGAACCTC
ACCCCTCCCTCCCCCCCCCCCCCCTCCGCCCCTCTTCGCCTCTTCTTTGT
CCTCGCCGTCCGCAGCGCGGGAATGGACCCAGCGGTTGGCGAGGGCGTCC
GCGTGATCAGGGTTGGGGTCTTTGTTCCGGAGAAACGTTCTGGAGAAAGT
TGTGTGCGACGAGCCGACGTTCTGGGGATGGTTTTCTTCGTCCGAGCCGC
CGGTGTTTTGTGTCGTTTCGCGTCGTTTCAATTTTGACGATGGACGACGA
CGTGCAGACAAAATAAAAAAGGTAGAACGCGTCCGGAGGACAGAAAGTAC
ACAGGAGGGACGCGCCGCGCCGGCCGGCCACCGCCGTCGGCGGACGGGAT
GGGACGGGATTGGGCGAGAATGTTTTCGTCTTTACGCTCGAATGCAAGCC
GGGGCGGGGCGGCGACCAGGCGGCAGCAGCAGCAGTTTGCTCGGGGGTTG
GGTGGATGCTCATGCG back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig787:3074..11039- >mRNA_L-elsbetiae_contig787.16823.1 ID=mRNA_L-elsbetiae_contig787.16823.1|Name=mRNA_L-elsbetiae_contig787.16823.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=948bp|location=Sequence derived from alignment at L-elsbetiae_contig787:3074..11039- (Laminarionema elsbetiae ELsaHSoW15) ATGGCGGCTAGCAATCTTCCCCGACGGATCGTCAAGGAAACTCAGAGGCT GCTTGCCGAGCCAGATGGCGGCTAGCAATCTTCCCCGACGGATCGTCAAG GAAACTCAGAGGCTGCTTGCCGAGCCAGTACCTGGCATTAGCGCCACCCC TTACGAAGACAACCTGCGCTACTTCAACGTGGTTATCACCGGACCGGAGC AGTCGCCGTACGAAATACCTGGCATTAGCGCCACCCCTTACGAAGACAAC CTGCGCTACTTCAACGTGGTTATCACCGGACCGGAGCAGTCGCCGTACGA AAGTGGGTCATTCAAGCTGGAGCTCTTCCTGCCGTCGGACTACCCCATGG CGCCTCCCAAGGTGGGTCATTCAAGCTGGAGCTCTTCCTGCCGTCGGACT ACCCCATGGCGCCTCCCAAGGTTCGCTTCCTGACAAAAATCTACCATCCA AACATCGACAAGCTGGGCCGCATCTGCCTCGACATCCTCAAGGACAAGTG GTCCCCTGCCCTCCAGATCAGGACGGTGCTTCTCAGCATCCAGGCGAGTT CGCTTCCTGACAAAAATCTACCATCCAAACATCGACAAGCTGGGCCGCAT CTGCCTCGACATCCTCAAGGACAAGTGGTCCCCTGCCCTCCAGATCAGGA CGGTGCTTCTCAGCATCCAGGCGACGCAGGCACTGCTCTCGGCCCCCAAC CCAGACGACCCGCTCGCGAACGACGTGGCGGAAATGTGGAAATCGAACGA GGCGCAGGCGCTGCAGACAGCGCAGGCACTGCTCTCGGCCCCCAACCCAG ACGACCCGCTCGCGAACGACGTGGCGGAAATGTGGAAATCGAACGAGGCG CAGGCGCTGCAGACAGCGCGGGAATGGACCCAGCGGTTGGCGAGGGCGTC CGCGTGACGCGGGAATGGACCCAGCGGTTGGCGAGGGCGTCCGCGTGA back to top
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