mRNA_L-elsbetiae_contig7867.16821.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig7867.16821.1
Unique NamemRNA_L-elsbetiae_contig7867.16821.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig7867.16821.1 vs. uniprot
Match: A0A6H5KX35_9PHAE (Defective in cullin neddylation protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX35_9PHAE)

HSP 1 Score: 340 bits (871), Expect = 2.010e-110
Identity = 163/189 (86.24%), Postives = 177/189 (93.65%), Query Frame = 3 
Query:    6 EAVDMSGICQLGEEIGVDAATDVSILVLCWKLGAKAKPGHVMEAEWMEGMERLGADSTDKLKEQLPSFDLGFMEGEEFREFYKFSFQFSREGTHRTIERDVAVPLLQMVMGSRSRYTEEFVEFLQQCPANTRVTFDQWSSFLEFSNTVKDGFQGYDEEGAWPILLDEFVEYMKGKL--EGGGAASSGKK 566
            EA+DMSGICQLGE+IG+DAATDVSILVLCWKLGAKAKPGHVM  EW+EGME LGADS DKLKEQLPSFDLGFMEGEEFREFYKF FQFSREGTHRTIERDVA PLL+MVMG+RSRYTE FV+FL+QCPANTRVTFDQWSSFLEFSNTVK+GF+GYDE+GAWPILLDEFVEY KGK   EGG A++SG+K
Sbjct:   53 EAIDMSGICQLGEDIGIDAATDVSILVLCWKLGAKAKPGHVMAPEWLEGMEMLGADSIDKLKEQLPSFDLGFMEGEEFREFYKFCFQFSREGTHRTIERDVAAPLLEMVMGARSRYTEAFVKFLKQCPANTRVTFDQWSSFLEFSNTVKEGFEGYDEDGAWPILLDEFVEYTKGKSANEGGAASASGQK 241
[Close]
BLAST of mRNA_L-elsbetiae_contig7867.16821.1 vs. uniprot
Match: A0A6U1LU97_9STRA (Defective in cullin neddylation protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1LU97_9STRA)

HSP 1 Score: 204 bits (520), Expect = 2.200e-58
Identity = 96/177 (54.24%), Postives = 130/177 (73.45%), Query Frame = 3 
Query:    9 AVDMSGICQLGEEIGVDAATDVSILVLCWKLGAKAKPGHVMEAEWMEGMERLGADSTDKLKEQLPSFDLGFMEGEEFREFYKFSFQFSREGTHRTIERDVAVPLLQMVMGS-RSRYTEEFVEFLQQCPANTRVTFDQWSSFLEFSNTVKDGFQGYDEEGAWPILLDEFVEYMKGKLE 536
            ++ M GI QL EE+G+DAA DV +LV+CWK+GA+  PG ++  EW +G+ERL  DS + L+  LPSFD GF++  E+R+F++F+FQFSREGTH+TIE+++   LL MV+ S RS + E F+ FL QCP NTR+T DQW+SFLEFS  V      YDE GAWP LLDE+VE+++   E
Sbjct:   53 SITMEGISQLAEELGMDAAADVRVLVMCWKIGAQT-PGALLREEWEQGLERLAVDSIEALRSLLPSFDPGFLDRAEYRDFFRFTFQFSREGTHKTIEKEIVEALLPMVLDSNRSPHLEGFLTFLAQCPPNTRITMDQWNSFLEFSYQVGPDLNEYDENGAWPTLLDEYVEFIRSPQE 228
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BLAST of mRNA_L-elsbetiae_contig7867.16821.1 vs. uniprot
Match: A0A7S2D3W8_9STRA (Defective in cullin neddylation protein n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D3W8_9STRA)

HSP 1 Score: 195 bits (495), Expect = 2.270e-54
Identity = 91/175 (52.00%), Postives = 126/175 (72.00%), Query Frame = 3 
Query:    6 EAVDMSGICQLGEEIGVDAATDVSILVLCWKLGAKAKPGHVMEAEWMEGMERLGADSTDKLKEQLPSFDLGFMEGEEFREFYKFSFQFSREGTHRTIERDVAVPLLQMVMGSRSRYTEEFVEFLQQCPANTRVTFDQWSSFLEFSNTVKDGFQGYDEEGAWPILLDEFVEYMKGK 530
            E ++M GI  L  E+G+D  TDV++LVLCWKL +  KPG +   E+ +GME +G  ST +L+  LPSFD GFME ++FR+FY+F FQF+REGT RTIE++  + LL + M +RS + +EF+EFL  C   +R+T DQW+SFLEFS+ V     GY+E+ AWP+LLDEFVE+ + K
Sbjct:   88 ETMNMEGIANLATELGLDPETDVTVLVLCWKLKSAKKPGEIQRDEFQKGMEAVGCSSTKELQAALPSFDPGFMEHKDFRDFYRFCFQFNREGTQRTIEKEAIMELLPLCMMNRSIFLQEFLEFLPTC-GTSRITADQWNSFLEFSHAVSADLSGYEEDSAWPLLLDEFVEWKQAK 261
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BLAST of mRNA_L-elsbetiae_contig7867.16821.1 vs. uniprot
Match: A0A7S2SVP2_9STRA (Defective in cullin neddylation protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SVP2_9STRA)

HSP 1 Score: 177 bits (448), Expect = 7.500e-48
Identity = 84/176 (47.73%), Postives = 124/176 (70.45%), Query Frame = 3 
Query:   12 VDMSGICQLGEEIGVDAATDVSILVLCWKLGAKAKPGHVMEAEWMEGMERLGADSTDKLKEQLPSFDLGFMEGEEFREFYKFSFQFSREGTHRTIERDVAVPLLQMVMGSRSRYTEEFVEFLQQCPANTRVTFDQWSSFLEFSNTVKDGFQGYDEEGAWPILLDEFVEYMK-GKLE 536
            + + GI  L EE+G+DA TD+  +VLC+KLG+KA+PG +   E+MEGM+ L       L+  +PS DLGFME  +FR+FY+F+F+F+ EGT +T+  D  + LL M +  RS++ ++F++FL Q    TRV+ DQW+SFLEFS  V +  Q YD+  AWP+LLDEFV++++ GKL+
Sbjct:   65 IGLEGIGVLCEELGLDATTDIRAMVLCFKLGSKARPGEISREEFMEGMQSLHCGDVKDLERIMPSLDLGFMEKRQFRDFYRFAFRFNLEGTMKTLAMDDVLTLLPMAIHDRSKFLDDFIQFLPQS-GTTRVSADQWNSFLEFSRDVSEDLQDYDDAAAWPVLLDEFVDWLRNGKLK 239
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BLAST of mRNA_L-elsbetiae_contig7867.16821.1 vs. uniprot
Match: A0A8J2T100_9STRA (Defective in cullin neddylation protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T100_9STRA)

HSP 1 Score: 174 bits (441), Expect = 4.720e-47
Identity = 90/177 (50.85%), Postives = 123/177 (69.49%), Query Frame = 3 
Query:    6 EAVDMSGICQLGEEIGVDAATDVSILVLCWKLGAKAKPGHVMEAEWMEGMERLGADSTDKLKEQL--PSFDLGFMEGEEFREFYKFSFQFSREGTHRTIERDVAVPLLQMVMGSRSRYTEEFVEFLQQCPANTRVTFDQWSSFLEFSNTV--KDGFQGYDEEGAWPILLDEFVEYMK 524
            + + M G+C L E +G+D  TDV +L  CW++GAK KP  ++  EW EGM RL  DS DKLK+ +   S D   +E ++FR+F+KF+F FSREGTHRTIE+D+   LL + +  RS + E F++FL+   + TRVT DQW SFLEFS  V    GF+GY+E+GAWP+LLDE+VE +K
Sbjct:   46 DCLGMEGLCGLCEAVGIDPETDVRLLCFCWRVGAK-KPSMILREEWNEGMCRLRLDSLDKLKKFVLGDSCDPTNLEQKQFRDFFKFTFLFSREGTHRTIEKDLVADLLPIAICGRSCHEETFLKFLE-ASSTTRVTLDQWCSFLEFSVKVGAAPGFEGYEEDGAWPLLLDEYVEQLK 220
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BLAST of mRNA_L-elsbetiae_contig7867.16821.1 vs. uniprot
Match: A0A7S0G9H3_9STRA (Defective in cullin neddylation protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0G9H3_9STRA)

HSP 1 Score: 171 bits (432), Expect = 5.550e-46
Identity = 79/173 (45.66%), Postives = 118/173 (68.21%), Query Frame = 3 
Query:   18 MSGICQLGEEIGVDAATDVSILVLCWKLGAKAKPGHVMEAEWMEGMERLGADSTDKLKEQLPSFDLGFMEGEEFREFYKFSFQFSREGTHRTIERDVAVPLLQMVMGSR--SRYTEEFVEFLQQCPANTRVTFDQWSSFLEFSNTVKDGFQGYDEEGAWPILLDEFVEYMKGK 530
            + G+ +LG++IG+DA  DV ILVL WK+ AKAKP  +   E+++G  +LG DS +K+K+ LPS D GF+E  EF +FY+F FQF+REGTHR+++R +   L+++V+ +R   +     V+FL+     T +T DQW  FL F N V D  + YDE+GAWP+++DE+V+Y   K
Sbjct:   29 LDGLSKLGDDIGIDALEDVRILVLMWKMQAKAKPAQINRDEYVKGCIKLGVDSIEKMKKLLPSLDPGFLEHSEFVDFYEFVFQFNREGTHRSLDRSLVAELMRLVLKNRVDKKKLHSVVDFLENHSNVTHITLDQWKQFLSFMNEVHDLKRDYDEDGAWPVIIDEYVDYTLSK 201
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BLAST of mRNA_L-elsbetiae_contig7867.16821.1 vs. uniprot
Match: A0A6S8ER72_9STRA (Defective in cullin neddylation protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A6S8ER72_9STRA)

HSP 1 Score: 170 bits (431), Expect = 1.680e-45
Identity = 83/171 (48.54%), Postives = 118/171 (69.01%), Query Frame = 3 
Query:   18 MSGICQLGEEIGVDAATDVSILVLCWKLGAKAKPGHVMEAEWMEGMERLGADSTDKLKEQLPSFDLGFMEGEEFREFYKFSFQFSREGTHRTIERDVAVPLLQMVMGSRSRYTEEFVEFLQQC-PANTRVTFDQWSSFLEFSNTVKD-GFQGYDEEGAWPILLDEFVEYMK 524
            M GI  + E +G++ ++DV +L LCW+LGAK +PG + + EW+EGME+LG DS  KL+  +P+ D   ++   FR+F+KF F FSREGTHRT+E+D+   LL + +  RS +T  F+EFL+   P N R+T DQW SFLEFS  V    F GY+ +GAWP+LLD++V+  K
Sbjct:   55 MEGISSMAEALGMEPSSDVRLLSLCWRLGAK-RPGQLDKEEWIEGMEKLGIDSMSKLEALIPNLDPKDLDKRNFRDFFKFVFLFSREGTHRTLEKDIVRVLLPIAICDRSEHTVPFLEFLESSQPDNLRLTLDQWCSFLEFSYKVSSTDFSGYEPDGAWPLLLDDYVDTTK 224
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BLAST of mRNA_L-elsbetiae_contig7867.16821.1 vs. uniprot
Match: A0A7S2ET44_TRICV (Defective in cullin neddylation protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2ET44_TRICV)

HSP 1 Score: 169 bits (428), Expect = 1.460e-44
Identity = 83/174 (47.70%), Postives = 120/174 (68.97%), Query Frame = 3 
Query:   18 MSGICQLGEEIGVDAATDVSILVLCWKLGAKAKPGHVMEAEWMEGMERLGADSTDKLKEQLPSFDLGFMEGEEFREFYKFSFQFSREGTHRTIERDVAVPLLQMVMGSR---SRYTEEFVEFLQQCPANT--RVTFDQWSSFLEFSNTVKDGFQGYDEEGAWPILLDEFVEYMK 524
            + GI +L +E+G+D   D+ ILVL WK+GA  KPG + + E+ +G E+L  DS DKLK+QLP+ D GF++  EF++FYKF FQF+R+GTHRT+++D+ + LLQMV+  R    R T  F EFL +    T  R+T DQW+SFL+F    +D  +  +   AWP+L+DE+VEYM+
Sbjct:   99 LEGISKLCDELGIDPLEDIRILVLLWKMGANDKPGQINKKEFSQGCEKLQVDSIDKLKKQLPALDTGFLDRTEFKDFYKFCFQFNRQGTHRTLDKDLVIALLQMVLKERVADDRLTT-FTEFLGKSTDETYSRITLDQWTSFLDFCYECEDISKFDEATSAWPVLIDEYVEYME 271
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BLAST of mRNA_L-elsbetiae_contig7867.16821.1 vs. uniprot
Match: A0A7S2I154_9STRA (Defective in cullin neddylation protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I154_9STRA)

HSP 1 Score: 169 bits (427), Expect = 2.600e-44
Identity = 84/174 (48.28%), Postives = 117/174 (67.24%), Query Frame = 3 
Query:   18 MSGICQLGEEIGVDAATDVSILVLCWKLGAKAKPGHVMEAEWMEGMERLGADSTDKLKEQLPSFDLGFMEGEEFREFYKFSFQFSREGTHRTIERDVAVPLLQMVMGSR--SRYTEEFVEFLQQCP--ANTRVTFDQWSSFLEFSNTVKDGFQGYDEE-GAWPILLDEFVEYMK 524
            M GI +L E++G+D   DV ILVL WK+GA   P  + + EW++G  +L  DS DKLK  LPS D GF++  EF++FYKF FQF+REGTHRT+++D+ + +LQMV+  R  S     F  FL+Q    + +R+T DQW+SFL+F    +D    YDE   AWP+L+DE+VEYM+
Sbjct:  109 MEGISKLCEDLGIDPMEDVRILVLLWKMGANRNPAQINKDEWIQGCTKLQTDSIDKLKSLLPSLDTGFLDQTEFKDFYKFCFQFNREGTHRTLDKDLVIMILQMVLKDRIASDRLSTFTTFLEQSKDESYSRITLDQWTSFLDFCYECED-ISDYDEATSAWPVLIDEYVEYME 281
[Close]
BLAST of mRNA_L-elsbetiae_contig7867.16821.1 vs. uniprot
Match: A0A7S2C2E8_9STRA (Defective in cullin neddylation protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C2E8_9STRA)

HSP 1 Score: 166 bits (421), Expect = 3.470e-44
Identity = 87/177 (49.15%), Postives = 120/177 (67.80%), Query Frame = 3 
Query:    9 AVDMSGICQLGEEIGVDAATDVSILVLCWKL-GAKAK---PGHVMEAEWMEGMERLGADSTDKLKEQLPSFDLGFMEGEEFREFYKFSFQFSREGTHRTIERDVAVPLLQMVMGS-RSRYTEEFVEFLQQCPANTRVTFDQWSSFLEFSNTVKDGFQGYDEEGAWPILLDEFVEYMK 524
            +++M GI  L E +G+DA  DV +LVLCWKL GA  K   PG +   E+  GM  L  DS   L + LPSF  GF+E +EFR+FY+F FQF+REGTH+TIE+ + + LL MV+   R  + +EF+ FL    +++R+T DQW+SFLEFS T+     GYD++ AWP+LLDEFVE+ +
Sbjct:   48 SMNMIGIADLCEALGMDAGADVRVLVLCWKLKGASKKSDNPGEISREEFEAGMTALTVDSMAGLTKILPSFSPGFLEHKEFRDFYRFCFQFNREGTHKTIEKAIVMELLPMVLDKDRCVFIDEFITFLG-VHSSSRITADQWNSFLEFSITIGADLSGYDDDSAWPVLLDEFVEWKR 223
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7867.16821.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KX35_9PHAE2.010e-11086.24Defective in cullin neddylation protein n=1 Tax=Ec... [more]
A0A6U1LU97_9STRA2.200e-5854.24Defective in cullin neddylation protein n=1 Tax=Fi... [more]
A0A7S2D3W8_9STRA2.270e-5452.00Defective in cullin neddylation protein n=2 Tax=Fl... [more]
A0A7S2SVP2_9STRA7.500e-4847.73Defective in cullin neddylation protein n=1 Tax=Rh... [more]
A0A8J2T100_9STRA4.720e-4750.85Defective in cullin neddylation protein n=1 Tax=Pe... [more]
A0A7S0G9H3_9STRA5.550e-4645.66Defective in cullin neddylation protein n=1 Tax=Pr... [more]
A0A6S8ER72_9STRA1.680e-4548.54Defective in cullin neddylation protein n=1 Tax=Au... [more]
A0A7S2ET44_TRICV1.460e-4447.70Defective in cullin neddylation protein n=1 Tax=Tr... [more]
A0A7S2I154_9STRA2.600e-4448.28Defective in cullin neddylation protein n=1 Tax=He... [more]
A0A7S2C2E8_9STRA3.470e-4449.15Defective in cullin neddylation protein n=1 Tax=Di... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7867contigL-elsbetiae_contig7867:555..7189 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score163.3
Seed ortholog evalue1.1e-37
Seed eggNOG ortholog35128.Thaps25225
Preferred nameDCUN1D5
KEGG koko:K17822,ko:K17824
Hectar predicted targeting categoryother localisation
GOsGO:0000151,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009892,GO:0009893,GO:0009987,GO:0010604,GO:0010605,GO:0019222,GO:0019538,GO:0019899,GO:0031323,GO:0031324,GO:0031325,GO:0031396,GO:0031398,GO:0031399,GO:0031400,GO:0031401,GO:0031624,GO:0032182,GO:0032268,GO:0032269,GO:0032270,GO:0032446,GO:0032991,GO:0036211,GO:0043085,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044390,GO:0044424,GO:0044464,GO:0045116,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050790,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051246,GO:0051247,GO:0051248,GO:0051338,GO:0051347,GO:0051438,GO:0051443,GO:0060255,GO:0065007,GO:0065009,GO:0070647,GO:0071704,GO:0080090,GO:0097602,GO:1901564,GO:1902494,GO:1903320,GO:1903321,GO:1903322,GO:1990234,GO:2000434,GO:2000435
EggNOG free text desc.Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity
EggNOG OGs2XFTT@2836,KOG3077@1,KOG3077@2759
COG Functional cat.S
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04121
Ec32 ortholog descriptionexpressed unknown protein
Ec32 orthologEc-03_003780.1
Exons4
Model size1811
Cds size564
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7867.16821.1prot_L-elsbetiae_contig7867.16821.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig7867 572..5959 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816870.2657099-UTR-L-elsbetiae_contig7867:554..5711622816870.2657099-UTR-L-elsbetiae_contig7867:554..571Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7867 555..571 +
1691683875.2184196-UTR-L-elsbetiae_contig7867:554..5711691683875.2184196-UTR-L-elsbetiae_contig7867:554..571Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7867 555..571 +
1622816870.3263347-UTR-L-elsbetiae_contig7867:5959..71891622816870.3263347-UTR-L-elsbetiae_contig7867:5959..7189Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7867 5960..7189 +
1691683875.2797205-UTR-L-elsbetiae_contig7867:5959..71891691683875.2797205-UTR-L-elsbetiae_contig7867:5959..7189Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7867 5960..7189 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816870.2780514-CDS-L-elsbetiae_contig7867:571..7391622816870.2780514-CDS-L-elsbetiae_contig7867:571..739Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7867 572..739 +
1691683875.2289128-CDS-L-elsbetiae_contig7867:571..7391691683875.2289128-CDS-L-elsbetiae_contig7867:571..739Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7867 572..739 +
1622816870.2891202-CDS-L-elsbetiae_contig7867:3100..32441622816870.2891202-CDS-L-elsbetiae_contig7867:3100..3244Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7867 3101..3244 +
1691683875.2430327-CDS-L-elsbetiae_contig7867:3100..32441691683875.2430327-CDS-L-elsbetiae_contig7867:3100..3244Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7867 3101..3244 +
1622816870.2999861-CDS-L-elsbetiae_contig7867:4689..48461622816870.2999861-CDS-L-elsbetiae_contig7867:4689..4846Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7867 4690..4846 +
1691683875.2621996-CDS-L-elsbetiae_contig7867:4689..48461691683875.2621996-CDS-L-elsbetiae_contig7867:4689..4846Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7867 4690..4846 +
1622816870.311522-CDS-L-elsbetiae_contig7867:5864..59591622816870.311522-CDS-L-elsbetiae_contig7867:5864..5959Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7867 5865..5959 +
1691683875.2711785-CDS-L-elsbetiae_contig7867:5864..59591691683875.2711785-CDS-L-elsbetiae_contig7867:5864..5959Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7867 5865..5959 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig7867.16821.1

>prot_L-elsbetiae_contig7867.16821.1 ID=prot_L-elsbetiae_contig7867.16821.1|Name=mRNA_L-elsbetiae_contig7867.16821.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=188bp
MSGICQLGEEIGVDAATDVSILVLCWKLGAKAKPGHVMEAEWMEGMERLG
ADSTDKLKEQLPSFDLGFMEGEEFREFYKFSFQFSREGTHRTIERDVAVP
LLQMVMGSRSRYTEEFVEFLQQCPANTRVTFDQWSSFLEFSNTVKDGFQG
YDEEGAWPILLDEFVEYMKGKLEGGGAASSGKKKSRS*
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mRNA from alignment at L-elsbetiae_contig7867:555..7189+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig7867.16821.1 ID=mRNA_L-elsbetiae_contig7867.16821.1|Name=mRNA_L-elsbetiae_contig7867.16821.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6635bp|location=Sequence derived from alignment at L-elsbetiae_contig7867:555..7189+ (Laminarionema elsbetiae ELsaHSoW15)
CAGGGGAAGCGGTGGACATGTCCGGCATCTGCCAGCTCGGGGAAGAGATC
GGGGTGGACGCCGCCACGGACGTGAGCATCCTGGTCCTGTGCTGGAAGCT
CGGCGCCAAGGCCAAGCCGGGGCACGTGATGGAGGCGGAGTGGATGGAGG
GGATGGAGAGGCTAGGCGCAGACTCGACAGACAAGGTGCAAGGAGGGGAG
GGGGGCGGGGGGGGCGGGGGCGGGGGGTGGGGGTTACCTACATGTATACG
GTACATTGCTGCTTCTTTTGCCCCGGTCGTGTTTACCGATGATCACTGAA
TACGCGCCGCCTTCGAGACGAGGTGTGACATCCCTGCCTGTGATGGGGAG
ATTCACCGTTGACATATTCGCGCTCTCTCGAGAAGCTCTCCCGGTCAGCT
TCTTGCACGTTAACTTGTCTGTCCTCCGTCCAGGCTGGGCCCTTTCCCGC
CCCCGCCGATCGCTGCCCGCATTCCTCTGTGTCGAGAGCGTTCTTGTCAA
CGGTGCTGCATCCTGTATTATTAATCGTCTTCTCGAGGGCCTCTCATTCT
CTCTCTGGAATGTTTTTGCGCCCTATCTCCGACCACCCACATACGTGGGG
TTCCTGCCCCCCTCTGATTGGCCAATCCTGCCGATCTCCGACCACCCACA
TACGTGGGTTCCTGCTCCCCTCGGATTGGCCAATATTGCCGATCTCCAAC
CACCCCCATGCGTGGAGTTCCTGCTCCCCTCTGATTGGCCAATATTGGCA
GGCCTGCGTATCGTCTTCCTCCTCGGTCTGCTGTAGCTGGGGGGAGGGAG
GGGTGCAGAGTACGGGCGTGGTGTCGCTGTAGTTTGCTCTGGTGTTGTTT
CTTTTGCTATAGATGCTGCTGCTGCTGCTGCTGCTGCTGCTTCTGCTGCT
GCTGCTGCTGCTGCTGCTGCCTGGTTGCTACTACTATATGTTGCTCTTTT
ACCGCCTGGGATGCGTTAGATATAAATCAGTAAATCGAAAATGGAACCTA
GCCCACACGAGAGCCAAGACTCCTTGAGTTTCAACCGGTATTCCGTCAAG
TGGCGTAATATTGGTTCAGTAGAATAGAAAAACACCTAAAATATCCCAAG
AATTCAACATGTCCCTTGCAAGACTTTGCCAGGTCAACCAACTTGTGTAC
TGAGGAGAAAACCCACGGTGTTGTTTTTATTTCTACACAGTTGCTTTGCC
GTTCGTTGTGAAGATGCTTTTTTGTGAGGGTCCCGGGACTGCTGTCTGTC
TCTCGAGGAGGCAACTACTTCGCACGCCACTGCTGTGGCCTGCGGCTCAG
CAAGCATTTTGTTGTAAGTCTTCGCCCTCACGCGCCCGCTTTCGACGAGC
ATGTGGTTTTACATGCGAAGGTCCTTTTTTTCAAGCTTTGGTACCCTGTT
TGGTCCAGGAAAGGGCAGGAGAAGCTCAGATCGCTCGACCTCGACCGAGG
TACACGAAACAAAAAAAGAAAAAAAAACACACGCAACACGTCAACATATC
AACACGCAACAATACACAGGGGGCTTAATTTGTTTTTGAAGACAGAATTT
TGGCAGGTTTAGCAACGACACTCCTCTGTCTAGATCCCCTCGCTTGTATC
GATAGAAACGCAGGCACATGTCCGTGTCCGCACCCGGTCACTACCAATTC
ACACAAAGCGTCTACATATTCGTTCGTTTCCATCAGCGCTGCGATTCACG
TCGCCAGGCACACGAAGGCATCTAGCTGCATACATGCCTACCGCCCTGCT
TGTGTGCTTGGTTCGGCCTCGCTTCGTAATGCTGCTCCGAAATTGTTATG
CTTGTTCCGTGCATTGCATTGCATTGCATTGCATGGTTAGTCGCTGTGCG
CGCGTGCGCACCAGTTGAAGGGCGTCTCCCTCTAAATAACTCCGAAATGA
AATGAAACGCTCGTCGTGCGTTGCAATCAATGCCTTGTGGTCGGTCGGTC
GGTCTGTCGGTCTGTCGGTCGGTCGGTCGGTCGGTCGGTCGGTTGGTCGG
TCGGTCGGTTGGTTGCTGTGCGCGCGCGCGAGAATCAAGCACAGCAATCA
GTCTACATACATACTTAACTCACAAACCGAGCCGCGTGCGCGTCCTCTCT
TTGACGCTGATCTTGAAAATAATTAGGTGAGTACATATGTACATACGGTT
GAGATGTCATTTTGCATCCATCTCTCCCGCTCGCTCTCTCGCTTTCTGTC
TGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTTGTTTTTTTGG
GTTTTTTCTCCTCCCATTATTGGCATATTTATTCGTCGTCTGCCCCACTG
GCCCCCGTACTCCACTACGACTAGCTATTTAGACGACCCAACCGGGGTCA
CACAGGGGGGGGGGGGGTGGACCCCCTCCTACGGTGCCTGCCTGTTATGT
TTTTTTATCGCGAGCAGGGTTCAGCACTCCCCCCACCCTTGTCAACAATG
AAGTCGAAGTATTACTTACTAACGAAATATATGTGTGTCTTGTCTGTCCA
CGCATGCTGCTGTACCATGCATGCACACGCGGCGTGCGCGAACCAGTTGA
AGGAGCAGCTCCCGTCGTTCGACCTTGGGTTCATGGAGGGCGAAGAGTTC
CGGGAGTTCTACAAGTTTTCCTTCCAGTTCTCCAGGGAGGGCACCCACCG
CACCATCGAGAGAGACGTCGCCGTACCGCTCCTGCAGATGGTGAGTCGAG
GTCAACGCTGGGCTAGCGAGTGGGGTTTGGGGGGATCAGTTGCCGCACAG
GAAGTGTTTTACGCGGTGTGTTGTTGTTGCTTTTAGAGTCGTCGAAGGAG
GGTGCGTGCGCACCGTAGATCGCAAAAGCGCAAGCGCGGAGGGGGGGGGA
GGGGGGGGGGGGGGGTTGTGCCCAGGACGGCGGGTCCGGCCGTCCGTCTG
GCAAGGTTTTCATGCCTCGCGAGGGTGTGCGCTGCGGGCATTATGGGGGT
TTGGACAGTAGTGGTGCTGGATGCATGGCGCAAAGGGGGGCATTGGTGAG
GGCGTGAGTCTTCGGTGCCGGCTTCACCGTGCCGGATGGGGTGAGAACAT
GGCTATGGAAGGTTGGCAGCGCTGTATACACCCTTCCGGTCGCGTGGTGT
TGCGTTTTTTTTTTCATGTCTTGGGGGTGACCGCTCGCGCGATTTCGCGG
CAGTGGGAAGCGCATATGTAGTTCGTGATTCCACTCCAGAAAGAGGAAAG
GGACCGCTGAACCCTTCTCGCTTAAAAGGTTTCAGGCAATCGCGGCAGGC
GGAGGGTGGGGGGCAGGCTCCTATGTGCCCTTCCTCTGGTGCGACCCCGG
CTGGTACAGGTGTACGTCAATACCGAAAGGTGTAGACAGGCACCAGAATG
GATGGGATGGGAGCGAAGCACAGCACTCTACACCTGCGCTCCAGCGTTTT
TTTCTCCTGCCTGTCACTGTTTGAGCTTCCTGACATTCTTTGGCTTCGTG
CCATTGACGGTGGCGGCAGATTATCCTCCGCGTGTGTGTGCGTTCGGCCC
GGATGTCTAGCGAGTTGTTGTCGGCTTTGATTGGGCCATGAGGGCCGAGC
AGCCGCTTGCTATCTACAGTAGATGGCCTAGAGTTTGTAGGCTACCCTAG
GCTGCTTCCCTAGTTTTTGTGTCTGGCTTCGCGCGCTTGCAGATATGTAT
CGGGTCAATATTCGTGCGGGATACGTTCGCAAAAACGAAAACTACCCCGG
TGGAGAGATCGGGACGGGTGTTCAATATGACGGTGTTTGATGTGTTGAAA
CAAACAACAACAACAACAACAACAACAACAACAATAAACCCCGGCAGCGG
CAGCTCAGGTATTGATTAGCTGCAGAATTGGTCGCGAGCAAGCAGAGATC
TGGTCAACAATCATCCAAAAATATGCCCCGAGCAACGGCTCGCTATCTAC
GATACCCTGCTCAATCGCCGCAAAAGAAACGGGTGACATAAATCAAGTGC
TGGGTCTTATTTTAGTACATTAATAGTAATCATCTTCCCTTTTTTCGGTT
TCGTGGTCGGCTTCCCTTTTTCGTCCCAGCTCCGCTTGTTCTTTATCCCT
CCCTCATATGCCCGCGGGTGACAAGCCGGCTCTTTTTTCTCTCCGTTTCG
ATCGGCTTGTGTTCACTACTCGACCTCCCGGTCAGGTCATGGGGTCACGC
AGCCGGTACACGGAGGAGTTCGTGGAGTTCTTGCAGCAGTGCCCGGCCAA
CACACGGGTGACCTTTGACCAGTGGAGCTCTTTCTTAGAATTTTCCAACA
CGGTGAAGGACGGTTTCCAGGGGTACGACGAAGAGGGAGCCTGTGAGTCC
TGCCGCCGCCGCCGCCGCCGCCGCTATCTACCGGCGTACAGCAGATTTGT
CGGTAGTGTTATTTGTGCTGCAAAGAAGGGGCCCGCTGTCCGTGTGTATG
AACTGAGGTCCTCGAGTGTTTCGTACAGAGCTTCTTTTGGTGCTCCTTCT
TCTGGAGCGCTGTATACAGGGAGGGCCTCGAGTTTTCTTGATGCCTTGGG
TGTTGATGTTGCTCAACCGTTATCGTCGCGGGGGAAACATAAGCTTCGCT
TTTGGAAAAGCATGCGGCACCCTTTCCGCATATCCCGTATCGCCCCCTCA
ACACCGATGCGTATCTCTCGATGGTGGCCGCACGAATGGTGCAAGGAACA
TGTACGTACATACATATATGGACGACAGGTAGATAACTGCTATTTTCGAG
TTGTTTGCTCGAAGACAGCAGTAGTGTGAGGACTCGTAGTCGTTTCACAA
TACTAATCATTTTGAACCGACGCGTGATTTCGTTTGTACATATGTATGTT
TTCTCGCATATGTAAGCTATCCGCGTTGAGGCCCGTGGTCACAAAACAGG
GCACGCCCAAAAGGACAAGCACGCGTGGATGTTTCATAAAAAATAAAATA
AAAACATATCCCCTTGGTTCGGCTACTTCGTCACGTAACCTATTTGTATT
ATCTTGTTCGCGGCGGGACTTCTCACCAGATACACCCCGCCCGTACTCAC
CGGCTTGCCGACGGCAGCAGTAGCGGTGGGCTCTCGCGCCTGCCTGCCTC
GCCGACGTGTCTGGGTACAGACGCCCTCTTTCGCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCTCCCCCCCCCCTCTCCCCCCCCCTCGCTC
CCCCTCCTACCCCGTTCGGGANNNNNNNNNNCCGCGGGCGGAGGGGGGGG
GGCCCCCCCCCCCCCCCCCCCCCCCCGCGCGGTCTGGGGTCGCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCTCGTCTCTATGTTGGCGTCGTCGT
TGTCTCTCAGGGCCTATTCTGCTCGATGAGTTCGTCGAGTACATGAAGGG
CAAGCTCGAGGGCGGTGGGGCTGCATCCTCCGGGAAGAAGAAAAGTAGGT
CATGATGCTTGCTCTTGGTCATGTAGAAGTGGCGTGATGGTATTGGAACC
ACGAGGATCGAGAGCGCACGCGCAAGCAATGTCAGCAAGTTCGCAGGGGG
GGGGGGGGCTCCGTGGACTTGGGGATATTTCGCCGTGGCTCCGTATGTAG
CGTGCCGCTTTTTTTGCTGGTGGGTTTTTTGCTAATACCTCGTCAACAAG
GCGCCGGGTAGACTTGAAACGTTTGAGAGTTCGTCCGTCCTGTGTTTTTT
TTTGTTTTGTTTTTTTGCTGTGAAAACTCACACGTGGTTTTGGTTTTGCG
TGCCGCACCAGTCCGGTGGCCTGGATCATTCCGTGGCGGTGGGGTGGGTG
TGATGTGGCTGCTTTTTGGTGGCATTTTTGGGCTCCCGTTGTATGTACGT
GTTGGCCACCCTGAGCCGCTCATCGATGTTGCTGTTTTTGGTTTGTGGGT
GTCTCCGGATTGTGTTTTGGCGACCTCTTTTAGGTACTTTTTTGACTTCC
AAGTATGGTTGGTGGCCTTCGCCGTGTCGTTGATGATCTCCGATCGGGTT
GATGGCCTCCGATCGCGTTGGTCTTGGACGGACAGAACGAAGGAAAGTGT
GTTGGCGCGCACGACGACGCCGGTCCGTTGAGGTCTTGGTCGTGGTGTCT
GTCACGGAAAATGTTGGACGCACGCCAAGAGAACGAGAGAGCTAGCCTCT
TCCGCGGGGGGGCGGGCTGCGCGGAGCGGGTGGCAGCGCCGCTTTTTTTG
GTCATAGGTTGCTCACTACGCCACTGTTGCCATTGCACTGCGGACATTTG
CTAGGTACTACTGAGTGCTGCTGTGTGTAGCGGTTGGTTCTGTTGGGGCG
TGCGCCGTACATAACACGCAGGTTTTGAGTCCGCACTCGGAAATTGTGGA
TGAGGCGATAATGACAAATGATGATACGATGGTTGCTCAGGCGGACATTG
ATCGGGCGCTCGAAGCGTGAGGCTGTATACCTTTCCGGCGCCTCTGAGCT
CAAAATCAGCACCCACACATACACCGCTCCGCTTTGAACGGTTTCGGTGC
CCTTTTGTTTGGTTCATATTTGCATAATACATTACTACCCTAGTCTCAGT
TGTTGTAGTGGAAGGGACGAGGCTTAGTTACTCCTGGCTCCCTCCGTTTT
TTCTTTTGAAATGAATATGAAATCAGGAAATCAAGGGCGGCACCTCCCCA
CACAAGCAAATACATGGTGGCAAATCGGCCGAACA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig7867:555..7189+

>mRNA_L-elsbetiae_contig7867.16821.1 ID=mRNA_L-elsbetiae_contig7867.16821.1|Name=mRNA_L-elsbetiae_contig7867.16821.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1128bp|location=Sequence derived from alignment at L-elsbetiae_contig7867:555..7189+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTCCGGCATCTGCCAGCTCGGGGAAGAGATCGGGGTGGACGCCGCCAC
GGACGTGAGCATCCTGGTCCTGTGCTGGAAGCTCGGCGCCAAGGCCAAGC
CGGGGCACGTGATGGAGGCGGAGTGGATGGAGGGGATGGAGAGGCTAGGC
GCAGACTCGACAGACAAGATGTCCGGCATCTGCCAGCTCGGGGAAGAGAT
CGGGGTGGACGCCGCCACGGACGTGAGCATCCTGGTCCTGTGCTGGAAGC
TCGGCGCCAAGGCCAAGCCGGGGCACGTGATGGAGGCGGAGTGGATGGAG
GGGATGGAGAGGCTAGGCGCAGACTCGACAGACAAGTTGAAGGAGCAGCT
CCCGTCGTTCGACCTTGGGTTCATGGAGGGCGAAGAGTTCCGGGAGTTCT
ACAAGTTTTCCTTCCAGTTCTCCAGGGAGGGCACCCACCGCACCATCGAG
AGAGACGTCGCCGTACCGCTCCTGCAGATGTTGAAGGAGCAGCTCCCGTC
GTTCGACCTTGGGTTCATGGAGGGCGAAGAGTTCCGGGAGTTCTACAAGT
TTTCCTTCCAGTTCTCCAGGGAGGGCACCCACCGCACCATCGAGAGAGAC
GTCGCCGTACCGCTCCTGCAGATGGTCATGGGGTCACGCAGCCGGTACAC
GGAGGAGTTCGTGGAGTTCTTGCAGCAGTGCCCGGCCAACACACGGGTGA
CCTTTGACCAGTGGAGCTCTTTCTTAGAATTTTCCAACACGGTGAAGGAC
GGTTTCCAGGGGTACGACGAAGAGGGAGCCTGTCATGGGGTCACGCAGCC
GGTACACGGAGGAGTTCGTGGAGTTCTTGCAGCAGTGCCCGGCCAACACA
CGGGTGACCTTTGACCAGTGGAGCTCTTTCTTAGAATTTTCCAACACGGT
GAAGGACGGTTTCCAGGGGTACGACGAAGAGGGAGCCTGGCCTATTCTGC
TCGATGAGTTCGTCGAGTACATGAAGGGCAAGCTCGAGGGCGGTGGGGCT
GCATCCTCCGGGAAGAAGAAAAGTAGGTCATGAGGCCTATTCTGCTCGAT
GAGTTCGTCGAGTACATGAAGGGCAAGCTCGAGGGCGGTGGGGCTGCATC
CTCCGGGAAGAAGAAAAGTAGGTCATGA
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