mRNA_L-elsbetiae_contig7864.16817.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7864.16817.1 vs. uniprot
Match: A0A6H5JHY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY9_9PHAE) HSP 1 Score: 101 bits (251), Expect = 2.900e-18 Identity = 130/457 (28.45%), Postives = 177/457 (38.73%), Query Frame = 3 Query: 456 TALHSAADAGEKDRVQELLLAGADVNALDGEGRTALHVAAERGGDDGVVRALSSAGADATLRHGPLSLSALGESTSFGWLDIMRVLIEHGVDLNVACRDGLTALHISILTSNVCAVDMLVEAGADIEARDGCGLAPLHIAASRNGNNTDVLRCLLARXXXXXXXXXXXXXXXXXXXVSIDDSPSTVDKVQALLDAGVSIDNRDHA-GRSALDYAALAGNAGVLSAMIEHDVDVTAVAHTGGAASGFXXXXXXXXXXXXXXXXXXXXXXXXXXXTEDKGLNCLHFAAGIADANVMQAMLRHAGGADGLGRMDLESALLLATTGPGINEKPIAAVVDLLLRWGADERAVSNANRR---LIGKNAPQDPATQKDAERVRELLRSAPKDRAWRRRGFLVVCRA-FPG-------KVRLKPGSGPPLPSRRCSRPRLVATDDAGVSEWAGVVGRLLWLDDGV 1790 TALH AA E D V L GA ++++ +G T L +AA G + +AL AGADA+ + + SAL + G+ D++RV IEH +D+N++ DG TALH ++ V G PLH+ A R A QALLDAG + R + G S+ H DV A + G A + G LH A+ A+LRH G + G ++ L L G A +VDLLLR GADE AVS ++ + + +D +RVR+LL AP DRAWRRRGFL++ RA +PG + P +G +R P D WAGVV L+ DGV Sbjct: 376 TALHIAAIEDEADMVLLLCSKGAGKDSINSQGSTPLQMAAGEG-NVAATQALLDAGADASSQSEGEASSALDCAVCQGYTDVVRVKIEHEIDVNISDVDGKTALHHAVAAGKV-----------------EMGCTPLHLVAMAG-------RAAAA---------------------------------QALLDAGADVALRQNGVGLSSXXXXXXXXXXXXXXXXXXHGGDVNAKVNNGITA------LRVASAFDKAPAIDVLTEAGANIEAQANGSTPLHVASQEGRLAAGIALLRH-GASVGKKNAAAQTPLHLVAAKAG--SPGTAEMVDLLLRRGADETAVSENGHTAADMVVLKTEESDSLAEDVDRVRKLLARAPADRAWRRRGFLILSRAHYPGGRVQFGHRTSQAPAAGVAKRTRSSEEPSRAEID------WAGVVSMLM--GDGV 757
BLAST of mRNA_L-elsbetiae_contig7864.16817.1 vs. uniprot
Match: A0A6H5JN15_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN15_9PHAE) HSP 1 Score: 94.4 bits (233), Expect = 4.550e-16 Identity = 118/478 (24.69%), Postives = 181/478 (37.87%), Query Frame = 3 Query: 525 DVNALDGEGRTALHVAAERGGDDGVVRALSSAGADATLRHGPLSLSA---LGESTSFGWLDIMRVLIEHGVDLNVACRDGLTALHISILTSNVCAVDMLVEAGADIEARDGCGLAPLHIA---------ASRNGNNTDVLRCLLARXXXXXXXXXXXXXXXXXXXVSIDDSPSTVDKVQALLDAGVSIDNRDHAGRSALDYAALAGNAGVLSAMIEHDVDVTAVAHTGGAASGFXXXXXXXXXXXXXXXXXXXXXXXXXXXTEDKGLNCLHFAAGIADANVMQAMLRHAGGADGLGRMDLESALLLATTGPGINEKPIAAVVDLLLRWGADERAVS---NANRRLIGKNAPQDPATQKDAERVRELLRSAPKDRAWRRRGFLVVCRAFPGKVRLKPGSGPPLPSRRCSRPRLVATDDAGVSEWAG--------------------------------VVGRLLWL-DDGVFRTVLEYV 1814 D +AL +GRT L + AE G +D V L AGAD SA L F IM VLI+HGVD+N + +ALH + ++ +D+L+ AGA IEA D PL +A +G L + ++ + ++ LL G ++D R G + L + + + + ++ H D G A ++ G A +VM+ +LR A R D + + T +DLLLRWGADE AV N + +N + + + V+++ + AP+D+ WR+RG+LV+CRAFP VRLK S P+ R V W+G +V +++ L +DGVFRT++E+V Sbjct: 401 DDDALTAKGRTPLGLTAEFGCEDATV-VLLDAGADVKAPANSADGSAAPSLATLNDFNADGIMNVLIQHGVDVNGKNNEEFSALHRAAYHDDIDCIDVLISAGAIIEATDNHKSMPLAVAFREAVDRGKGDNSGAGEFAAMIALLKHGAYPNIGNKGKGYSNYLLYYLERCECPIFVLRELLAVGPNLDVRADDGYTPLTVSQ--DHPELFTELLLHGADTNVQTKRGATA-----LHKAAENNNGVCIEALTSAGTSTSIKDNDGRTPFQLATICHSRSVMRMLLRSAHD-----RCDSRDSAMATT-------------IDLLLRWGADENAVDSLGNTPLTVWRENESTYTLSWANKQSVKKIFKRAPRDKRWRQRGWLVLCRAFPNSVRLKADSDGTCPAAG----RSVRARSVRAGSWSGSSSVPPFGEARGGPVGPLPREKHGVIAGGLSALVAKVVGLHEDGVFRTIMEFV 848
BLAST of mRNA_L-elsbetiae_contig7864.16817.1 vs. uniprot
Match: A0A6H5K8F3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8F3_9PHAE) HSP 1 Score: 90.1 bits (222), Expect = 8.500e-15 Identity = 63/151 (41.72%), Postives = 86/151 (56.95%), Query Frame = 3 Query: 456 TALHSAADAGEKDRVQELLLAGADVNALDGEGRTALHVAAERGGDDGVVRALSSAGADATLRHGPLSLSALGESTSFGWLDIMRVLIEHGVD--------LNVACRD--GLTALHISILTSNVCAVDMLVEAGADIEARDGCGLAPLHIAA 878 T LH AA G + LLL A+VNALDGE LHV AE+G V AL SA A+ +LR G LSA+ + FG +D+MRVLI+HG+D +V D G T LH+++ +++V + L+ GAD +G L+ LH+AA Sbjct: 85 TPLHIAASLGHHSILTLLLLQEAEVNALDGEDSAPLHVEAEQG-SLAAVEALVSAHANLSLRFGDDDLSAMDRAAYFGHVDVMRVLIQHGIDQSDAGATGADVGAEDCGGDTPLHLAVRSASVDTMAALLRHGADANRVNGDQLSALHLAA 234
BLAST of mRNA_L-elsbetiae_contig7864.16817.1 vs. uniprot
Match: D7G751_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G751_ECTSI) HSP 1 Score: 87.8 bits (216), Expect = 5.100e-14 Identity = 128/443 (28.89%), Postives = 178/443 (40.18%), Query Frame = 3 Query: 615 SAGADATLRHGPLSLSALGESTSFGWLDIMRVLIEHGVDLNVACRDGLTALHISILTSNVCAVDMLVEAGADIEARDGCGLAPLHIAASR--------NGNNTD--VLRCLLARXXXXXXXXXXXXXXXXXXXVSIDDSPSTVDKVQALLDAGVSIDNRDHAGRSAL----DYAALAGNAGVLSAMIEHDVDVTAVAHTGGAASGFXXXXXXXXXXXXXXXXXXXXXXXXXXXTEDKGLNCLHFAAGIADANVMQAMLRHAGGADGLGRMDLESALLLATTGPGINEKPIAAVVDLLLRWGADERAVSNANRRLIG---KNAPQDPATQKDAERVRELLRSAPKDRAWRRRGFLVVCRAFPGKVRLKPGSGPPLP-SRRCSRPRLVATDDAG-------VSEWAGV-----------------VGRLLWL-DDGVFRTVLEYV 1814 +A AD T LSL+ L E D M++LI+HG D+N DG TALH + + + V VD+L+ AGA IEA D PL +A NG D + LL I + + LL G ++D RD G + L D+ L S ++ H D G A XXXXXXXXXXXX +A T+G + +A +DLLLRWGADE AV +A R + +N + + + V+++ + AP+D+AWRRRG+LV+CRAFP +VRLK + P + R R R V V E GV V +++ L +DGVF T++E+V Sbjct: 476 NAPADHTDGSAALSLATLSEYVD----DTMKILIQHGADVNARNTDGFTALHRAAMYNEVDGVDLLISAGAIIEALDNHKSTPLAVAFREAVYRWKKYNGGAGDFAAMVSLLKHGADPNIGNIQEGCPNSLLWYFIR-CGCPISVFRELLAVGPNLDVRDDEGCTLLLLSQDHPEL------FSELLLHGADTNVQTKRGKTALHKAAQDDNGVCIEALISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAHDQCTSG----DSAMATTMDLLLRWGADENAVDSAGRTPVTVWRENESMYTLSWANKQSVKKMFQRAPRDKAWRRRGWLVLCRAFPNRVRLKEDNAGTCPRAGRSLRARRVGAGSGSGSSSVPPVGEAGGVPVGTLPPEKMAGGLSALVAKVVGLHEDGVFMTIMEFV 903
BLAST of mRNA_L-elsbetiae_contig7864.16817.1 vs. uniprot
Match: D7G981_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G981_ECTSI) HSP 1 Score: 83.6 bits (205), Expect = 2.850e-13 Identity = 54/142 (38.03%), Postives = 78/142 (54.93%), Query Frame = 3 Query: 1449 VVDLLLRWGADER---AVSNANRRLIGKNAPQDPATQKDAERVRELLRSAPKDRAWRRRGFLVVCRAFPGKVRLKPGSGPPLPSRRC----SRPRLV-------------ATDDAGVSEWAGVVGRLLWLDDGVFRTVLEYV 1814 VVDLLLRW ADE A + ++G P+ + + +RV +LL+ AP+DRAWRRRG LV+CRA P ++ L+ + S SR +LV A D EW+ +V R+L LD+G+FRT++ Y+ Sbjct: 258 VVDLLLRWNADETDDDAYGHTPGNIVGCMTPETDSMFVNVQRVWKLLQYAPQDRAWRRRGMLVLCRAHPERLGLRQNASHVQESTVLRVTRSRTKLVEREQVAGGSGEGAAADGRTAREWSNMVYRVLGLDEGIFRTIVGYL 399
BLAST of mRNA_L-elsbetiae_contig7864.16817.1 vs. uniprot
Match: A0A6H5KXK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXK5_9PHAE) HSP 1 Score: 83.2 bits (204), Expect = 3.840e-13 Identity = 55/141 (39.01%), Postives = 85/141 (60.28%), Query Frame = 3 Query: 1443 AAVVDLLLRWGADERAVSNANRR---LIGKNAPQDPATQKDAERVRELLRSAPKDRAWRRRGFLVVCRAFPGKV---RLKPGSGPPLPSRRC------SRPRLVA----TDDAGVSEWAGVVGRLLWL-DDGVFRTVLEYV 1814 A VV+ LLR GADE + + +IG++ ++ +D ERVRELL +AP DRAWRRRG+L++CRA P +V R+ G+ +RR +R R +A D++ WA VV +++ L ++G+FRT++EY+ Sbjct: 260 AEVVNSLLRAGADETIANVQGNKAVDMIGEDVEEEDRLTEDVERVRELLANAPADRAWRRRGYLIMCRAQPDRVPERRMTSGTHYTNVARRTRSRAKMARARGIAGESTVDESTGGNWAVVVSKVISLQEEGIFRTIVEYL 400
BLAST of mRNA_L-elsbetiae_contig7864.16817.1 vs. uniprot
Match: D7FKL4_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKL4_ECTSI) HSP 1 Score: 81.3 bits (199), Expect = 1.400e-12 Identity = 80/262 (30.53%), Postives = 115/262 (43.89%), Query Frame = 3 Query: 1056 NRDHAGR--SALDYAALAGNAGVLSAMIEHDVDVTAVAHTGGAASGFXXXXXXXXXXXXXXXXXXXXXXXXXXXTEDKGLNCLHFAAGI---ADANVMQAMLRHAGGADGLGRMDLESALLLATTGPGINEKPIAAVVDLLLRWGADERAVSNANRRL---IGKNAPQDPATQKDAERVRELLRSAPKDRAWRRRGFLVVCRAFPGKVRLKPGSGPPLPSRRCSRPRLVATDDAGVSEWAGVVGRLLWL-DDGVFRTVLEYV 1814 NR + R SALD A G+ + +IEH DV A + G AA + G LH AA +A + +L+H GAD + + +L ++ I VVDLLLRWGADE V+ R IG P++ ++ E VR+LL +AP DRAWRRR LV+CRA P K++L S R +R + R+L L ++G+FRT++ ++ Sbjct: 153 NRRYGDREISALDIGAGEGHVDFIRTLIEHGADVDATNYGGVAA-----LHHATANNKVEAMDVLLRAGANARSMSESGHTVLHMAAITRTRTEAATLAVLLKH--GAD-VNAQTVGGTSVLEYVATRAGKQGIVEVVDLLLRWGADETHVAGNGMRAADAIGMKVPEEDRIPEEFEGVRKLLANAPADRAWRRRCSLVLCRARPDKMQLS--------SDRIAR----------------LEARVLGLVEEGIFRTIVRFI 382
BLAST of mRNA_L-elsbetiae_contig7864.16817.1 vs. uniprot
Match: A0A6J2PJN0_COTGO (cyclin-dependent kinase 4 inhibitor C isoform X1 n=1 Tax=Cottoperca gobio TaxID=56716 RepID=A0A6J2PJN0_COTGO) HSP 1 Score: 73.2 bits (178), Expect = 2.210e-11 Identity = 47/131 (35.88%), Postives = 77/131 (58.78%), Query Frame = 3 Query: 462 LHSAADAGEKDRVQELLLAGADVNALDGEGRTALHVAAERGGDDGVVRALSSAGADATLRHGPLSLSALGESTSFGWLDIMRVLIEHGVDLNVACRDGLTALHISILTSNVCAVDMLVEAGADIEARDGCG 854 L +A+ G+ +V LL GADVN L+ RTAL V G+ VV AL AGAD ++R L+L+ + ++ G++D +R+L++HG D+N+ G LH++ + N+ A +L+E A+ + +G G Sbjct: 5 LCNASARGDLHQVLLLLQNGADVNGLNTSNRTALQVV--NFGNVKVVEALLEAGADTSVRDPVLNLTVMHDAARAGYIDSVRMLMDHGADINLTDDVGNLPLHLAAMEGNLEATQLLIERTANPQTPNGQG 133
BLAST of mRNA_L-elsbetiae_contig7864.16817.1 vs. uniprot
Match: D7G0W1_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0W1_ECTSI) HSP 1 Score: 76.6 bits (187), Expect = 5.090e-11 Identity = 59/154 (38.31%), Postives = 79/154 (51.30%), Query Frame = 3 Query: 447 GCGTALHSAADAGEKDRVQELLLAGADVNALDGEGRTALHVAAERGGDD--GVVRALSSAGADATLRHGPLSLSALGESTSFGWLDIMRVLIEHGVDLNVACRDGLTALHISILTSNVCAVDMLVEAGADIEAR---DGCGLAPLHIAASRNGN 893 GC T L AA + + LL G D + +G T L A E +D G+ AL +AGAD +R G S L S +D+ R +++ G + DG TALH + N AVD+LVE GAD+EA+ DGC PLH+AA + GN Sbjct: 154 GC-TPLRVAAGCASEAALLALLRHGDDKESTGVDGLTPLQDAME---NDLWGIATALMAAGADVNVRDGSNGYSPLDCSVRSDGMDLTRQVLQRGAIATASASDGYTALHWAGWNMNASAVDLLVEVGADLEAKVALDGC--TPLHLAARQAGN 301
BLAST of mRNA_L-elsbetiae_contig7864.16817.1 vs. uniprot
Match: D7G6X8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6X8_ECTSI) HSP 1 Score: 75.9 bits (185), Expect = 1.170e-10 Identity = 98/345 (28.41%), Postives = 139/345 (40.29%), Query Frame = 3 Query: 663 ALGESTSFGWLDIMRV----LIEHGVDLNVACRDGLTALHISILTSNVCAVDMLVEAGADIEARDGCGLAPLHIAASRNGNNTDVLRCLLARXXXXXXXXXXXXXXXXXXXVSIDDSPSTVDKVQALLDAGVSIDNRDHAGRSALDYAALAGNAGVLSAMIEHDVDVT--AVAHTGGAASGFXXXXXXXXXXXXXXXXXXXXXXXXXXXTEDKGLNCLHFAAGIADANVMQAMLRHAGGADGLGRMDL--ESALLLATTGPGINEKPIAAVVDLLLRWGADERAVSNANR---RLIGKNAPQD--PATQKDAERVRELLRSAPKDRAWRRRGFLVVCRAFPGKVR 1658 AL E+ G +D V ++ L A D LH++ V L+ GA D G PLH+A NG+ + V L A P T + + I NR + S LD AA G+A VL A+++H VDV +T + D +N H AA A+ +H + D+ E+ L++A G + + A+VD+LLR GADE A++ R ++G + P ++D ERVR+LL +AP DRAWRRRGFLV+CRAF K R Sbjct: 4 ALEEAVDSGHVDESAVEPILVVAKVASLQYASVDSSDQLHVAASQGQEGRVATLLAGGAKKNGLDAQGRTPLHLAVE-NGHLSTVKALLAA-------------------------DPDTSVRYR--------IWNRSY---SVLDLAAQKGDACVLRAILQHGVDVNRRTDGYTSLHVAALNNRVAAIDVLVEAGAHVEVEDDDDCTPFLDACINHCHEAA--------LALYKHGSNIEA---RDIRGETPLIIAARQAG--RQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDVERVRDLLENAPVDRAWRRRGFLVLCRAFWIKAR 298 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7864.16817.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7864.16817.1 >prot_L-elsbetiae_contig7864.16817.1 ID=prot_L-elsbetiae_contig7864.16817.1|Name=mRNA_L-elsbetiae_contig7864.16817.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=372bp MRVLIEHGVDLNVACRDGLTALHISILTSNVCAVDMLVEAGADIEARDGCback to top mRNA from alignment at L-elsbetiae_contig7864:4941..7930- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7864.16817.1 ID=mRNA_L-elsbetiae_contig7864.16817.1|Name=mRNA_L-elsbetiae_contig7864.16817.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2990bp|location=Sequence derived from alignment at L-elsbetiae_contig7864:4941..7930- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7864:4941..7930- >mRNA_L-elsbetiae_contig7864.16817.1 ID=mRNA_L-elsbetiae_contig7864.16817.1|Name=mRNA_L-elsbetiae_contig7864.16817.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2232bp|location=Sequence derived from alignment at L-elsbetiae_contig7864:4941..7930- (Laminarionema elsbetiae ELsaHSoW15)back to top |