mRNA_L-elsbetiae_contig7855.16811.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7855.16811.1 vs. uniprot
Match: D7FK50_ECTSI (Putative methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK50_ECTSI) HSP 1 Score: 404 bits (1037), Expect = 5.530e-132 Identity = 222/376 (59.04%), Postives = 260/376 (69.15%), Query Frame = 1 Query: 1 FQRFLLTQCVWWGHPVTPSTGSIDYFLSLDVELDEGQDDYLEQMVRMDILNTADFIQVILARAPLILPRAQPQFSKQNFAVGCRCRQMDLDDSTEN--PELPSGSPSTRNDDSASTWSPAPDRPEILSTEPAAGSNKPASASNVTDLAGKALSRRAAAVEANTRSDPVGGEVWSNPLCSRIYLVLGRLFKLHPDFDAAIEGILAGDTNGCVVLIHETRDEEWTRVVWTRLRDVLVPKG------MCN--FDRLRIMHHWLYPQALRRATAVLDTFPYGGCLTVLEGLSSGVPVVTLPAKFIRGRFALAMYQQMGYSDLVADDVAEYVSIAVRLGVDQALRKEAVIRVQEACRESLHKHQQSAHEWAAFFVRAHRAA 1098 F R QCVWWGHPVTPSTGS+DYFLSLDVEL+ GQDDYLEQMVRMD++NTA F Q+ + L LP P N G + + E+ LPS S+ N D A + ++ + E AG PA+A+ A + D GE + P C YLV+GRLFKLHPDFDAAIEGIL GD +GCV+LIHET+DEEWTRVVW+RLRDVL P+G MC+ F RLRIMHHWLYPQALRRATAVLDTFPYGGCLTVLEGLS+GVPVVTLPAK++RGRFALAMYQQMGY++LVADDV EYVS+AV+LG D+ R++ V +V+ A RESLH+H QSA EWAAF VRAHR A Sbjct: 318 FARLAPVQCVWWGHPVTPSTGSVDYFLSLDVELEGGQDDYLEQMVRMDVVNTAHFKQMAAWVSDLGLPSEPPGRRDNNRDKGPQSPLSFTNGGVESLSTSLPSTIKSSSNADMADVLQISVPYADLAAAE--AGPTTPATAATT-----------GVAARTHNEHDVTIGEQDAGPSCRHKYLVMGRLFKLHPDFDAAIEGILEGDKDGCVILIHETKDEEWTRVVWSRLRDVLAPRGRTPSTCMCDGLFGRLRIMHHWLYPQALRRATAVLDTFPYGGCLTVLEGLSNGVPVVTLPAKYVRGRFALAMYQQMGYTELVADDVQEYVSLAVQLGKDRDFRQKVVTKVEGAYRESLHQHHQSAQEWAAFIVRAHRGA 680
BLAST of mRNA_L-elsbetiae_contig7855.16811.1 vs. uniprot
Match: A0A6H5KUN2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUN2_9PHAE) HSP 1 Score: 371 bits (953), Expect = 1.470e-116 Identity = 218/409 (53.30%), Postives = 258/409 (63.08%), Query Frame = 1 Query: 1 FQRFLLTQCVWWGHPVTPSTGSIDYFLSLDVELDEGQDDYLEQMVRMDILNTADFIQVILARAPLILPRAQPQFSKQNFAVGCRCRQMDLDDSTEN--PELPSGSPSTRNDDSASTWSPAPDRPEILSTEPAAGSNKPASASNVTDLAGKALSRRAAAVEANTRSDPVGGEVWSNPLCSRIYLVLGRLFKLHPDFDAAIEGILAGDTNGCVVLIHETRDEEWTRVVWTRLRDVLVPKG--------------MCN------FDRLRIMHHWLYPQALRRATAVLDTFPYGGCLTVLEGLSSGVPVVTLPAKFIRGRFALAMYQQMGYSDLVADDVA---------------------EYVSIAVRLGVDQALRKEAVIRVQEACRESLHKHQQSAHEWAAFFVRAHRAA 1098 F R QCVWWGHPVTPSTGS+DYFLSLDVELD GQDDYLEQMVRMD++NTA F Q+ + L LP P N G + + E+ + S S N D A + ++ + E AG PA+A+ T +A + D G+ + P C + YLV+GRLFKLHPDFD AI+GIL G +GCV+LIHET+DEEWTRVVW+RLRDVL P+ +C F RLRIMHHWLYPQALRRATAVLDTFPYGGCLTVLEGLS+GVPVVTLPAK++RGRFALA+YQQMGY++LVADDV EYVS+AV+LG DQ LRK+ V +V+ A RESLH+H QSA EWAAF VRAHR A Sbjct: 557 FARLAPVQCVWWGHPVTPSTGSVDYFLSLDVELDGGQDDYLEQMVRMDVVNTAHFKQMAAWVSDLGLPSGPPGRRDINSDKGPQSPLSFTNGGEESLGTSISSTIKSFSNADMADILQISLPYADLAAAE--AGPTTPAAATT-TGVAARTYDEH----------DVTIGDQEAGPSCRQKYLVMGRLFKLHPDFDVAIKGILEGGKDGCVILIHETKDEEWTRVVWSRLRDVLAPREKNTRIVLQPFLVRPLCVDCAVGLFGRLRIMHHWLYPQALRRATAVLDTFPYGGCLTVLEGLSNGVPVVTLPAKYVRGRFALAIYQQMGYTELVADDVQVGVVSPQISSGFSELFIIGRQEYVSLAVQLGKDQDLRKKVVAKVEGAYRESLHQHHQSAQEWAAFIVRAHRGA 952
BLAST of mRNA_L-elsbetiae_contig7855.16811.1 vs. uniprot
Match: A0A7S2CRM6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CRM6_9STRA) HSP 1 Score: 163 bits (413), Expect = 2.900e-43 Identity = 98/227 (43.17%), Postives = 120/227 (52.86%), Query Frame = 1 Query: 538 YLVLGRLFKLHPDFDAAIEGILAGDTNGCVVLIHETRDEEWTRVVWTRLRDVLVPKGMCN---------------------------------------FDRLRIMHHWLYPQALRRATAVLDTFPYGGCLTVLEGLSSGVPVVTLPAKFIRGRFALAMYQQMGYSD----LVADDVAEYVSIAVRLGVDQALRKEAVIRVQEACRESLHKHQQSAHEWAAFFVRAH 1089 +LVLGRLFKLHPDFD I GIL D CVVLI E R E WT VW RL+ + + R+R +HHW Y + LR + AVLDTFPYGGCLT LE LS G PV+TLP++FIRGRF LAMY+QMG D LVA D A V A+R+G D+ R+ VQ A ++ LH++ ++ EW F H Sbjct: 98 FLVLGRLFKLHPDFDEIILGILYADRLSCVVLIQE-RHELWTARVWERLQSAAQRREKESTAEWSHRQHHGRRPSSDIGGTMEEEESGHFVEDFNAIEVLSRVRFIHHWNYLRVLRLSYAVLDTFPYGGCLTSLESLSFGKPVLTLPSRFIRGRFTLAMYRQMGLDDPSIGLVAVDAASMVQSAIRIGTDRNYRRNVSQWVQIAYKDRLHRNLEAGVEWGRLFRALH 323
BLAST of mRNA_L-elsbetiae_contig7855.16811.1 vs. uniprot
Match: A0A7S3K439_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K439_9STRA) HSP 1 Score: 157 bits (396), Expect = 1.930e-38 Identity = 86/188 (45.74%), Postives = 117/188 (62.23%), Query Frame = 1 Query: 535 IYLVLGRLFKLHPDFDAAIEGILAGDTNGCVVLIHETRDEEWTRVVWTRL--RDVLVPKGMCNFDRLRIMHHWLYPQALRRATAVLDTFPYGGCLTVLEGLSSGVPVVTLPAKFIRGRFALAMYQQMGYSDLVADDVAEYVSIAVRLGVDQALRKEAVIRVQEACRESLHKHQQSAHEWAAFFVRAHR 1092 IYLVLGRLFKLHP FD + IL D G + LI E + +W+RL R + + R+R +H+W Y + L AT VLDT+PYGGCLT L+ +S+GVP+VTLP+ F RGRFA ++Y QM ++ LVA D +++SI RLG D R +A+ +Q A + +H + A+EWA FF R R Sbjct: 501 IYLVLGRLFKLHPKFDDVLLRILDTDPTGIIALIIEPQ-RFILHDLWSRLKKRALFLFGNDLLLRRIRFLHYWKYIEILSIATLVLDTYPYGGCLTALDAMSNGVPLVTLPSTFERGRFAASIYAQMNFTHLVARDADDFISIVTRLGTDATFRDQAIASLQGAYPQ-VHHTRDVANEWAKFFTRVLR 686
BLAST of mRNA_L-elsbetiae_contig7855.16811.1 vs. uniprot
Match: A0A7S3UTW7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UTW7_HETAK) HSP 1 Score: 140 bits (354), Expect = 2.260e-35 Identity = 73/142 (51.41%), Postives = 89/142 (62.68%), Query Frame = 1 Query: 520 PLCSRIYLVLGRLFKLHPDFDAAIEGILAGDTNGCVVLIHETRDEEWTRVVWTRLRDVLVPKGMCNFDRLRIMHHWLYPQALRRATAVLDTFPYGGCLTVLEGLSSGVPVVTLPAKFIRGRFALAMYQQMGYSDLVADDVAE 945 P + +YLVLGRLFKLHPDFD AI IL G N VVLI E + + T ++W R++ + RL +HHW Y ALR A AVLDT+PYGGCLT LE LS P+VTLP+ ++GRF LAMY+QM LV E Sbjct: 18 PPDAELYLVLGRLFKLHPDFDLAIIEILKGHANAHVVLIAEKHNNQITSLLWHRIKATVAENDRHILSRLVFVHHWNYVAALRHAAAVLDTYPYGGCLTSLEALSHLRPLVTLPSAHVKGRFTLAMYKQMEDLGLVVPATEE 159
BLAST of mRNA_L-elsbetiae_contig7855.16811.1 vs. uniprot
Match: A0A8J2T266_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T266_9STRA) HSP 1 Score: 146 bits (368), Expect = 1.530e-34 Identity = 84/188 (44.68%), Postives = 115/188 (61.17%), Query Frame = 1 Query: 535 IYLVLGRLFKLHPDFDAAIEGILAGDTNGCVVLIHETRDEEWTRVVWTRLRDVLVPKGMCNFDRLRIMHHWLYPQALRRATAVLDTFPYGGCLTVLEGLSSGVPVVTLPAKFIRGRFALAMYQQMGYSDLVADDVAEYVSIAVRLGVDQALRKEAVIRVQEACRESLHKHQQSAHEWAAFFVRAHRAA 1098 IYLVLGRLFK+H FD + +L D G V+L+ E + E T + R++ + + + DR+ + +W Y AL A VLDT PYGGCLT L+ LS+GVP+V LP RGR A ++YQQMG SD VA + ++YVSIA RLG D A + AV R++ + ++ H+ A EWA F+R R A Sbjct: 558 IYLVLGRLFKVHALFDDMLLDLLERDRTGVVLLVGEPQ-EPLTIKTYQRIQRRGLERNL-KTDRIHFIDYWAYMGALATARVVLDTHPYGGCLTALDALSNGVPLVVLPGPAERGRHAASIYQQMGVSDFVAANQSDYVSIAARLGTDDAYHEAAVARIRASYLDA-HRAGAVAAEWAGAFLRMARGA 742
BLAST of mRNA_L-elsbetiae_contig7855.16811.1 vs. uniprot
Match: F0Y355_AURAN (Glyco_transf_41 domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y355_AURAN) HSP 1 Score: 137 bits (345), Expect = 1.370e-31 Identity = 74/184 (40.22%), Postives = 109/184 (59.24%), Query Frame = 1 Query: 535 IYLVLGRLFKLHPDFDAAIEGILAGDTNGCVVLIHETRDEEWTRVVWTRLRDVLVPKGMCNF-DRLRIMHHWLYPQALRRATAVLDTFPYGGCLTVLEGLSSGVPVVTLPAKFIRGRFALAMYQQMGYSDLVADDVAEYVSIAVRLGVDQALRKEAVIRVQEACRESLHKHQQSAHEWAAFFVR 1083 +YL+LGRLFK+H FD + +L D G V ++ E + + T +++ RLR + + +RLR++ +W Y AL A LDT+PYGGCLT L+ LS+GVP+V LP RGR A+++Y QM +D VA D A+YV +AV L D + AV ++ ++ H+ A EWA F+R Sbjct: 160 LYLILGRLFKVHALFDDILLDVLEADPTGVVAVVSEPQ-RQLTSLMFRRLRASAGARNRAHLLERLRVVDYWNYVNALSNARVALDTYPYGGCLTALDALSNGVPLVVLPGPLERGRHAMSIYGQMNLTDFVARDAADYVRLAVALATDDDVHARAVGEIRAKYPDA-HRAGDVAAEWAGAFLR 341
BLAST of mRNA_L-elsbetiae_contig7855.16811.1 vs. uniprot
Match: A0A2E4XRJ1_9PROT (Glyco_transf_41 domain-containing protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E4XRJ1_9PROT) HSP 1 Score: 114 bits (285), Expect = 7.960e-24 Identity = 63/169 (37.28%), Postives = 96/169 (56.80%), Query Frame = 1 Query: 490 DPVGGEV-WSNPLCSRIYLVLGRLFKLHPDFDAAIEGILAGDTNGCVVLIHETRDEEWTRVVWTRLRDVLVPKGMCNFDRLRIMHHWLYPQALRRATAVLDTFPYGGCLTVLEGLSSGVPVVTLPAKFIRGRFALAMYQQMGYSDLVADDVAEYVSIAVRLGVDQALRK 993 +P G ++ P + +Y + LFK+HPD DAA+ IL GD G +VL+ E D W + V R + L L H Y + + VLD++P+ G T + ++ GVPVVT P +++RGRF++A +++MG S+LVA D+AE+ IA+RLG D R+ Sbjct: 401 NPAGARADFALPEDATVYFLAQNLFKIHPDMDAALRRILDGDRKGRLVLL-EGHDPGWGQAVRERFAETL-RDTTSRVVFLERQSHDDYMRLFTLSDVVLDSYPFSGGNTTYQAIAMGVPVVTCPGRYLRGRFSMATFERMGMSELVAGDMAEFADIALRLGTDDGYRR 567
BLAST of mRNA_L-elsbetiae_contig7855.16811.1 vs. uniprot
Match: A0A1F3AU20_9PROT (Glyco_transf_41 domain-containing protein n=1 Tax=Alphaproteobacteria bacterium RIFOXYD12_FULL_60_8 TaxID=1797233 RepID=A0A1F3AU20_9PROT) HSP 1 Score: 112 bits (281), Expect = 3.090e-23 Identity = 72/187 (38.50%), Postives = 101/187 (54.01%), Query Frame = 1 Query: 529 SRIYLVLGRLFKLHPDFDAAIEGILAGDTNGCVVLIHETRDEEWTRVVWTRL-RDVLVPKGMCNFDRLRIMHHWLYPQALRRATAVLDTFPYGGCLTVLEGLSSGVPVVTLPAKFIRGRFALAMYQQMGYSDLVADDVAEYVSIAVRLGVDQALRKEAVIRVQEACRESLHKHQQSAHEWAAFFVRA 1086 + +Y+ LFKLHPD DA IL D G VVLI D WT + R R + G + L + H + + LR +LD + G LT L+ + G P++TLPA+++RGR A ++QMG D +A V +YV+ AVRLG D+A R + EAC + L+ +Q A E AAFF+ A Sbjct: 469 AHLYICPQTLFKLHPDIDAIFRAILVRDPLGQVVLIEGRAD--WTNTLRARFARSLGHTVGRVRY--LPRLSHPEFLEFLRLGDVMLDPLHFSGGLTSLQAFAVGTPIITLPARYMRGRVTYAYWKQMGLDDGIAASVEDYVNKAVRLGTDRAERSRVSKAILEACPQ-LYDNQTVAEEIAAFFIEA 650
BLAST of mRNA_L-elsbetiae_contig7855.16811.1 vs. uniprot
Match: A0A2E7RAH6_9PROT (Protein O-GlcNAc transferase n=2 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E7RAH6_9PROT) HSP 1 Score: 111 bits (278), Expect = 7.920e-23 Identity = 63/163 (38.65%), Postives = 89/163 (54.60%), Query Frame = 1 Query: 535 IYLVLGRLFKLHPDFDAAIEGILAGDTNGCVVLIHETRDEEWTRVVWTRLRDVLVPKGMCNFDRLRIMHHWLYPQALRRATAVLDTFPYGGCLTVLEGLSSGVPVVTLPAKFIRGRFALAMYQQMGYSDLVADDVAEYVSIAVRLGVDQALRKEAVIRVQEAC 1023 +YL LFK+HP+ DAA+ IL GD G +V+ H + WT + R L + +C L + + + A +LDT+P+GG T +G S+G+P+VT P KF+RGR A+A+YQ M D VA EYV IA+RLG D R ++ E C Sbjct: 506 LYLCPQSLFKIHPEMDAALAKILQGDPTGQLVIFHGNA-KIWTEKLLQRWMP-LFGEAICRVVVLERVSWQEFLNIMSLADVMLDTWPFGGGNTNYQGFSAGLPIVTFPGKFLRGRAAMALYQHMKIDDCVAGSPKEYVEIAIRLGRDADFRTSVSEKILERC 666 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7855.16811.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7855.16811.1 >prot_L-elsbetiae_contig7855.16811.1 ID=prot_L-elsbetiae_contig7855.16811.1|Name=mRNA_L-elsbetiae_contig7855.16811.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=326bp MVRMDILNTADFIQVILARAPLILPRAQPQFSKQNFAVGCRCRQMDLDDSback to top mRNA from alignment at L-elsbetiae_contig7855:379..2936+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7855.16811.1 ID=mRNA_L-elsbetiae_contig7855.16811.1|Name=mRNA_L-elsbetiae_contig7855.16811.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2558bp|location=Sequence derived from alignment at L-elsbetiae_contig7855:379..2936+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7855:379..2936+ >mRNA_L-elsbetiae_contig7855.16811.1 ID=mRNA_L-elsbetiae_contig7855.16811.1|Name=mRNA_L-elsbetiae_contig7855.16811.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1956bp|location=Sequence derived from alignment at L-elsbetiae_contig7855:379..2936+ (Laminarionema elsbetiae ELsaHSoW15)back to top |