mRNA_L-elsbetiae_contig785.16806.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig785.16806.1
Unique NamemRNA_L-elsbetiae_contig785.16806.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig785.16806.1 vs. uniprot
Match: A0A8J9UWK9_BRAAE (Hypothetical protein n=1 Tax=Brassicogethes aeneus TaxID=1431903 RepID=A0A8J9UWK9_BRAAE)

HSP 1 Score: 151 bits (382), Expect = 2.820e-36
Identity = 117/389 (30.08%), Postives = 180/389 (46.27%), Query Frame = 1
Query:   10 AIHQAAGCGYNEIVFVLLRSGVEKNALDQGGHSPLILAAGSGHLPTVETLLAVGVNINVRTTDSTGIAALHLAVYFGHDAVVSALLRSGAEKDALDAQGNSPLIFATNRXXXXXXXXXXXXXADLTIRGTDDGVCAIHEAAGGGYGEMVFVLLRSGAEKNALDQRGQTPLMFATRSGHLPVVETLLAAGSDINVRTTDSTGVAALHLAASFGHGSVVCALLRSGAEKDTLDANGNSPLIWASNRGHLVVVEILLAAGADLTIRTIDDGAFAILEAAGGGYGEIVSVLLTKGADKESLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNTRSTADGRSAXXXXXXXXXXXXXKAILGGRANPNAQDEDGYTALHIAAVADQAEAIEALIS 1176
            A+H A   G  E+  VL       NA D  G+SPLI A  + H    E L+  G ++N+R +      ALH+A   G+  + + L+ +GA+ +A D  G SPL+FA  +             AD+ +RG+ D   A+H AA  G  EM  VL+ +GA+ NA D  G +PLMFA  + H    E L+  G D+N+R +     A LH+AA+ G+  +   L+ +GA+ +  D NG  PL++A         E L+  GAD+ +    D    + EAA  G   + +VL++ GAD  + +                            VN R + D R+A               ++   A+ NAQD +  + L  A   + AE +E L++
Sbjct: 3698 ALHVAGLTGNVEMANVLXXXXXXINAQDINGYSPLIFAVDNNHTKITEYLINHGADVNLRGSKDNR-TALHVAGLTGNVEMANVLVSNGADINAQDINGYSPLMFAVYKNHTETVEFLINQGADVNLRGSKDNRTALHVAAATGNIEMSNVLVSNGADINAQDINGYSPLMFAVDNNHPETAEFLINQGVDVNLRGSKDNRTA-LHVAAATGNVKMANVLVSNGADINAQDINGYWPLMFAFITNQTETAEFLINQGADVNLGGNKDKRTVLHEAAFTGNVTMANVLVSNGADLNAQDINGYSPLMFAVDNNHTETAEFLINQGANVNLRGSKDNRTALHVAAATGNVTMANVLVSNGADINAQDINEMSPLFTAVSLNHAEIVELLLA 4084          
BLAST of mRNA_L-elsbetiae_contig785.16806.1 vs. uniprot
Match: D7FVI9_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVI9_ECTSI)

HSP 1 Score: 110 bits (274), Expect = 4.770e-23
Identity = 97/257 (37.74%), Postives = 125/257 (48.64%), Query Frame = 1
Query:   70 GVEKNALDQGGHSPLILAAG---SGHLPT-VETLLAVGVNINVRTTDSTGIAALHLAVYFGHDAVVSALLRSGAEKDALDAQGNSPLIFATNRXXXXXXXXXXXXXADLTIRGTDDGVCAIHEAAGGGYGEMVFVLLRSGAEKNALDQRGQTPLMFATRSGHLPVVETLLAAGSDINVRTTDST--------GVAALHLAASFGHGSVVCALL-RSGAEKDTLDANGNSPLIWASNRGH-LVVVEILLAAGADLTIR 798
            G E   L  GG S  +   G   SG L    E   A+  + + RTT       L  A   G++ +V  LLR   +KD  D  G +PL+ A                AD T R  DDG  +I  AA GGY E+V  LL  GA+K++    G+TPLM A+R GHLPVV+TLL A +D+ +     T           ALH A + GH  VV ALL + G E D +D +G + L  A   G  L ++E LL AGAD  IR
Sbjct:   13 GQELQRLQDGGRSRTLGDFGWLDSGALDAFAERYFAI--DADERTT------TLGFAASEGNNHMVRCLLR-WKDKDEQDQFGYTPLMKAAENGHMPVMETLLDQGADATFRHLDDGSTSIIAAALGGYNEIVIALLNKGADKDSPAANGRTPLMEASRKGHLPVVKTLLNADADVTLAAHGLTDEDYCLGDNCTALHFATAGGHLGVVNALLSKGGLEIDAVDTDGTTALHLAVIMGRSLPIMETLLVAGADPDIR 260          
BLAST of mRNA_L-elsbetiae_contig785.16806.1 vs. uniprot
Match: M2UFG2_COCH5 (Uncharacterized protein (Fragment) n=2 Tax=Cochliobolus heterostrophus TaxID=5016 RepID=M2UFG2_COCH5)

HSP 1 Score: 97.8 bits (242), Expect = 4.590e-19
Identity = 85/266 (31.95%), Postives = 121/266 (45.49%), Query Frame = 1
Query:   46 IVFVLLRSGVEKNALDQGGHSPLILAAGSGHLPTVETLLAVGVNINVRTTDSTGIAALHLAVYFGHD------AVVSALLRSGAEKDALDAQGNSPLIFATNRXXXXXXXXXXXXXADLTIRGTDDGVCAIHEAAGGGYGE------MVFVLLRSGAEKNALDQRGQTPLMFATRSGHLPVVETLLAAGSDINVRTTDSTGVAALHLAASFGHG------SVVCALLRSGAEKDTLDANGNSPLIWASNRGHLVVVEILLAAGADL 789
            +V +LL    + +A D    +PL  A+  GHL  VE LL  G  +N +     G+  LH A  F         AVV  LL   A+ DA D +  +PL FA+               A++  +    G+  +H A             +V +LL   A+ +A D   +TPL FA+  GHL +VE LL  G+++N +     G+  LH A  F         +VV  LL   A+ D  D    +PL +AS  GHL +VE LL  GAD+
Sbjct:   88 VVKLLLAKKADIDARDDEWRTPLYFASEGGHLQLVEALLEEGAEVNKQC--KKGMTVLHAACRFKSSPPNDNIAVVKLLLAKKADIDARDDEWRTPLYFASEGGHLQLVEALLEEGAEVNKQ-CKKGMTVLHAACRFKSSPPNDNIAVVKLLLAKKADIDARDDEWRTPLYFASEGGHLQLVEALLEEGAEVNKQC--KKGMTVLHAACRFKSSPPNDNIAVVKLLLAKKADIDARDYQMRTPLYFASEGGHLQLVEALLEEGADV 348          
BLAST of mRNA_L-elsbetiae_contig785.16806.1 vs. uniprot
Match: UPI00201F50BB (ankyrin repeat domain-containing protein 50-like n=1 Tax=Haliotis rufescens TaxID=6454 RepID=UPI00201F50BB)

HSP 1 Score: 96.3 bits (238), Expect = 6.250e-18
Identity = 87/302 (28.81%), Postives = 149/302 (49.34%), Query Frame = 1
Query:   13 IHQAAGCGYNEIV-FVLLRSGVEKNALDQGGHSPLILAAGSGHLPTVETLLAVGVNINVRTTDSTGIAALHLAVYFGHDAVVSALLRSGAEKDALDAQ-----GNSPLIFATNRXXXXXXXXXXXXXADLTIRGTDDGVCAIHEAAGGGYGEMV-FVLLRSGAEKNALDQRGQTPLMFATRSGHLPVVETLLAAGSDINVRTTDSTGVAALHLAASFGHGSVVCALLRSGAEKDTLDAN-----GNSPLIWASNRGHLVVVEILLAAGADLTIRTIDDGAFAILEAAG-GGYGEIVSVLLTK 879
            +H A   G+ ++V +VL    V+ N   Q G +P++ AA  GH    + L+  G +++V   D   I  LHLA   G   +V+ +L     +D +D       G +PL+ A  +              D+++   DDG   +H A  GG+ EMV +VL     +  +  Q G+TP++ A   GH  V + L++ G D++V   D   +  LH+A   G   +V  +L     +D +D N     G +P+++A+ +GH  V ++L++  AD T+  +DD +  I   A  GG+ E+V  +L++
Sbjct:  242 LHLACIGGHIDMVKYVLSLDVVDINVRGQYGRTPMMSAAWRGHRKVFDLLVPKGGDVSVVDDDGNNI--LHLACIGGQVEMVNYIL----SQDIVDTNSRGQFGRTPLMIAAEKGQRIVFDLLVSKGGDVSLA-DDDGNNILHVACIGGHVEMVNYVLSHGPLDIKSSGQYGRTPVLLAAEKGHRDVFDLLVSKGDDVSVIDDDGNNI--LHMACIGGQVQMVQYVL----SQDIVDINSTGQHGRTPVMFAAEKGHRDVFDLLVSKNADATL--VDDDSNNIFHVACIGGHAEMVKHVLSQ 528          
BLAST of mRNA_L-elsbetiae_contig785.16806.1 vs. uniprot
Match: A0A7S3FZE7_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3FZE7_9EUKA)

HSP 1 Score: 91.3 bits (225), Expect = 2.330e-16
Identity = 91/292 (31.16%), Postives = 136/292 (46.58%), Query Frame = 1
Query:    1 GAFAIHQAAG-CGYNEIVFVLLRSGVEKNA---LDQG-GHSPLILAAGSGHLPTVETLLAVGVNINVRTTDSTGIAALHLAVYFGHDAVVSALLRSGAEKDALDAQGNSPLIF---------ATNRXXXXXXXXXXXXXADLTIRGTDDGVCAIHEAA---GGGYGEMVFVLLRSGAEKNALDQRGQTPLMFATRSGHLPVVETLLAAGSDINVRTTDSTGVAALHLAASFGHGSVVCALLRSGAEKDTLDAN--GNSPLIWASNRGHLVVVEILLAAGADLTIRTIDDGAF 819
            G  A+H A G       + +L+  G   NA   L  G G +PL+LA+  G    V+ LL  G +++ R   S G  ALH+AV   H  ++ +L+R+GA+ +A DA+G +PLI          A  R             AD           A+H      G      V +LL SGA+ +A  +   TP++ A   G L +V+ LL  G+DI V    S GV+ +H+AA++   S++  LL    E D  D +  G  PL  A  +  + VVE LL  GA+  ++  +   F
Sbjct:  166 GMTALHAAIGDTPQPATIQLLIELGSNVNAVVVLPSGDGLTPLMLASAKGSALAVDLLLEGGASVSKRKNKS-GATALHIAVKGFHLQILKSLIRAGADVNATDAEGTTPLIECAKLKPSSPAQARARFLVLSFLLGEGADANKVDERHKRTALHYLCINGGDNCANAVKLLLSSGADIDARSEENLTPIVMAVHQGALQLVKLLLEQGADI-VTPVGSAGVSLVHVAATYARISILEYLLEQVDEVDVDDCSQCGVPPLSLAVWKDKVEVVECLLRYGANPLLKARNSSPF 455          
BLAST of mRNA_L-elsbetiae_contig785.16806.1 vs. uniprot
Match: A0A2E7BN91_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2E7BN91_9BACT)

HSP 1 Score: 90.5 bits (223), Expect = 4.000e-16
Identity = 80/248 (32.26%), Postives = 106/248 (42.74%), Query Frame = 1
Query:  112 LILAAGSGHLPTVETLLAVGVNINVRTTDSTGIAALHLAVYFGHDAVVSALLRSGAEKDALDAQGNSPLIFATNRXXXXXXXXXXXXXADLTIRGTDDGVCAIHEAAGGGYGEMVFVLLRSGAEKNALD-QRGQTPLMFATRSGHLPVVETLLAAGSDINVRTT----------------------DSTGVAALHLAASFGHGSVVCALLRSGAEKDTLDANGNSPLIWASNRGHLVVVEILLAAGAD 786
            L+ AA +    TV  LL     ++V T+   G  ALH A Y+   A+V  LL SGA+ DA +  G +PL  A                AD  + G   G   +   A  G    V  L+  GA   A +  RGQT LM+A  + H  VV  LL  G+ ++ RT                       D+ G   L  AA  G      ALL +GA      A+GNSPL+ A+  GH ++   LLA GAD
Sbjct:   29 LVEAAKAQQWDTVGRLLVA--KVDVTTSQPDGATALHWAAYWNEPAIVEGLLESGAQVDAENDYGATPLWTACANRNSGIVRQLLLAGADANL-GLRSGETVLMRCAQTGDPLAVEALVTHGAAVGATEPSRGQTALMWAAANRHAEVVRVLLGHGALVDARTATVQQLRGTGETSTTSPQGATYFDAGGFTPLLFAARHGDVETARALLEAGAALGDTSADGNSPLVLAAISGHELLARFLLAQGAD 273          
BLAST of mRNA_L-elsbetiae_contig785.16806.1 vs. uniprot
Match: UPI001EB059E9 (ankyrin repeat domain-containing protein 17-like n=2 Tax=Haliotis rufescens TaxID=6454 RepID=UPI001EB059E9)

HSP 1 Score: 90.1 bits (222), Expect = 9.000e-16
Identity = 73/292 (25.00%), Postives = 133/292 (45.55%), Query Frame = 1
Query:    1 GAFAIHQAAGCGYNEIVFVLLRSGVEKNALDQGGHSPLILAAGSGHLPTVETLLAVGVNINVRTTDSTGIAALHLAVYFGHDAVVSALLRSGAEKDALDAQGNSPLIFATNRXXXXXXXXXXXXXADLTIRGTDDGVCAIHEAAGGGYGEMVF-VLLRSGAEKNALDQRGQTPLMFATRSGHLPVVETLLAAGSDINVRTTDSTGVAALHLAASFGHGSVVCALLRSG-AEKDTLDANGNSPLIWASNRGHLVVVEILLAAGADLTIRTIDDGAFAILEAAGGGYGEIVSVL 870
            G   + +AA  G+  +  +L R G + + + + G + L LA    ++P V+ +L+  + + V     +G   + +A  FGH  V++ L+  G +   +D+ G + L                                  H A  GG   MV   L +  A  N+  + GQTP+M A   GH  V + L+  G+D++++   +  +  LHLA S G   +V  ++    A   ++ +N  +PL++A+ RGH  V+++L A G DL++  +D+     +   GG    ++ VL
Sbjct:   82 GRTPVMKAAWGGHVTVFDLLERVGADLSVVSEHGDTILHLACNRDNVPMVKHILSKHI-VGVNCRGKSGRTPVMIAAMFGHRGVLNVLVDKGGDVSLVDSNGENLL----------------------------------HVACRGGSSSMVLHCLSKRIARINSKTRNGQTPVMLAAEGGHGGVFDLLVGKGADLSLKDGHNNNI--LHLACSGGSVKIVQRVMSENIAGVTSIGSNDRTPLMFAAERGHTKVIDLLRAQGCDLSVSDVDNNNLLHIACLGGHIEMVLYVL 336          
BLAST of mRNA_L-elsbetiae_contig785.16806.1 vs. uniprot
Match: UPI001EB0AA87 (ankyrin repeat and KH domain-containing protein 1-like isoform X1 n=1 Tax=Haliotis rufescens TaxID=6454 RepID=UPI001EB0AA87)

HSP 1 Score: 90.1 bits (222), Expect = 1.000e-15
Identity = 73/292 (25.00%), Postives = 133/292 (45.55%), Query Frame = 1
Query:    1 GAFAIHQAAGCGYNEIVFVLLRSGVEKNALDQGGHSPLILAAGSGHLPTVETLLAVGVNINVRTTDSTGIAALHLAVYFGHDAVVSALLRSGAEKDALDAQGNSPLIFATNRXXXXXXXXXXXXXADLTIRGTDDGVCAIHEAAGGGYGEMVF-VLLRSGAEKNALDQRGQTPLMFATRSGHLPVVETLLAAGSDINVRTTDSTGVAALHLAASFGHGSVVCALLRSG-AEKDTLDANGNSPLIWASNRGHLVVVEILLAAGADLTIRTIDDGAFAILEAAGGGYGEIVSVL 870
            G   + +AA  G+  +  +L R G + + + + G + L LA    ++P V+ +L+  + + V     +G   + +A  FGH  V++ L+  G +   +D+ G + L                                  H A  GG   MV   L +  A  N+  + GQTP+M A   GH  V + L+  G+D++++   +  +  LHLA S G   +V  ++    A   ++ +N  +PL++A+ RGH  V+++L A G DL++  +D+     +   GG    ++ VL
Sbjct:  285 GRTPVMKAAWGGHVTVFDLLERVGADLSVVSEHGDTILHLACNRDNVPMVKHILSKHI-VGVNCRGKSGRTPVMIAAMFGHRGVLNVLVDKGGDVSLVDSNGENLL----------------------------------HVACRGGSSSMVLHCLSKRIARINSKTRNGQTPVMLAAEGGHGGVFDLLVGKGADLSLKDGHNNNI--LHLACSGGSVKIVQRVMSENIAGVTSIGSNDRTPLMFAAERGHTKVIDLLRAQGCDLSVSDVDNNNLLHIACLGGHIEMVLYVL 539          
BLAST of mRNA_L-elsbetiae_contig785.16806.1 vs. uniprot
Match: UPI001EE4F501 (ankyrin repeat domain-containing protein 50-like n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE4F501)

HSP 1 Score: 88.6 bits (218), Expect = 1.860e-15
Identity = 72/269 (26.77%), Postives = 129/269 (47.96%), Query Frame = 1
Query:   13 IHQAAGCGYNEIV-FVLLRSGVEKNALDQGGHSPLILAAGSGHLPTVETLLAVGVNINVRTTDSTGIAALHLAVYFGHDAVVSALLRSG-AEKDALDAQGNSPLIFATNRXXXXXXXXXXXXXADLTIRGTDDGVCAIHEAAGGGYGEMVFVLLRSG-AEKNALDQRGQTPLMFATRSGHLPVVETLLAAGSDINVRTTDSTGVAALHLAASFGHGSVVCALLRSG-AEKDTLDANGNSPLIWASNRGHLVVVEILLAAGADLTIRTID 807
            +H A   G  EIV ++L ++ ++ N+  + G +P++ AA  GH+   + L  VG ++++      G   LHLA +  +  +V  +L       +     G +P++ A                 D+++  ++ G   +H A  GG   MV   L    A  N     GQTPLM A   GH  V + L++ G+D++++ T +  +  LH+A   G   +V  ++    A   +  +NG +PL++A+ RGH  V+++L   G DL++   D
Sbjct:   33 LHFACLGGNIEIVKYILSQNFIDINSRGKFGRTPVMKAAWGGHVSLFDLLERVGADLSL--VSEQGDTILHLACHRDNVPMVKHILSKHIVGVNCRGMNGRTPVMIAAMYGHRGVLNVLVDDGGDVSLVDSN-GENVLHAACRGGSNNMVLHFLSKRIARINNKSGNGQTPLMLAAEGGHRGVFDLLVSKGADLSLKDTSNNNI--LHMACRGGCVEIVRRVISDNIAGITSTGSNGRTPLMFAAERGHTTVIDVLKQHGCDLSVTDAD 296          
BLAST of mRNA_L-elsbetiae_contig785.16806.1 vs. uniprot
Match: UPI001EE55FC7 (putative ankyrin repeat protein RF_0381 n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE55FC7)

HSP 1 Score: 88.2 bits (217), Expect = 2.920e-15
Identity = 82/294 (27.89%), Postives = 143/294 (48.64%), Query Frame = 1
Query:   13 IHQAAGCGYNEIVFVLLRS---GVEKNALDQGGHSPLILAAGSGHLPTVETLLAVGVNINVRTTDSTGIAALHLAVYFGHDAVVSALLRSGAEK-DALDAQGNSPLIFATNRXXXXXXXXXXXXXADLTIRGTDDGVCAIHEAAGGGYGEMVFVLLRSGAEK-NALDQRGQTPLMFATRSGHLPVVETLLAAGSDINVRTTDSTGVAALHLAASFGHGSVVCALLRSG-AEKDTLDANGNSPLIWASNRGHLVVVEILLAAGADLTIRTIDDGAFAILEAAGGGYGEIVSVLLT 876
            +H A   G  EI+  LL     G++K   D+ G +P++ AA  GH    + L+  G +++    D   I  LH+A   G+  ++  LL+      +  D +G +P++ A                ADL++ G D  +  ++ A  GG  E+   LL+      +  D +G TP+M A  SGH  V + L+  G+D+++   D   +  LH+A   G+  ++  +L+    +  + DANG +PL++  + G+  V ++L+ AGADL++ T D+     +    G +G I   LLT
Sbjct:  109 LHVACQGGNVEIIQYLLTQDTVGIDKQ--DENGWTPVMHAAKGGHEAVFDVLVDKGADLSPVDGDKETI--LHVACEGGNVEIIKYLLKHDIVNINCQDGKGWTPIMHAAMSGHKGVFDVLVEGGADLSLVG-DYKMNTLYAACKGGNVEITQYLLKHDIVNIDCQDGKGWTPIMHAAMSGHKGVFDVLVDEGADLSLLCDDKETI--LHVACEGGNVEIIKYILKHDIVDIGSRDANGWTPLMYGVSNGNEDVFDVLVEAGADLSLVTNDNETILHVACVWGSFG-ITKYLLT 394          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig785.16806.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8J9UWK9_BRAAE2.820e-3630.08Hypothetical protein n=1 Tax=Brassicogethes aeneus... [more]
D7FVI9_ECTSI4.770e-2337.74Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
M2UFG2_COCH54.590e-1931.95Uncharacterized protein (Fragment) n=2 Tax=Cochlio... [more]
UPI00201F50BB6.250e-1828.81ankyrin repeat domain-containing protein 50-like n... [more]
A0A7S3FZE7_9EUKA2.330e-1631.16Hypothetical protein (Fragment) n=1 Tax=Palpitomon... [more]
A0A2E7BN91_9BACT4.000e-1632.26Uncharacterized protein n=1 Tax=Acidobacteria bact... [more]
UPI001EB059E99.000e-1625.00ankyrin repeat domain-containing protein 17-like n... [more]
UPI001EB0AA871.000e-1525.00ankyrin repeat and KH domain-containing protein 1-... [more]
UPI001EE4F5011.860e-1526.77ankyrin repeat domain-containing protein 50-like n... [more]
UPI001EE55FC72.920e-1527.89putative ankyrin repeat protein RF_0381 n=1 Tax=Ha... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig785contigL-elsbetiae_contig785:28145..29329 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score111.7
Seed ortholog evalue7.9e-22
Seed eggNOG ortholog2880.D7FVI9
Hectar predicted targeting categoryother localisation
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons1
Model size1185
Cds size1185
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816869.3789387-CDS-L-elsbetiae_contig785:28144..293291622816869.3789387-CDS-L-elsbetiae_contig785:28144..29329Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig785 28145..29329 -
1691683874.6373234-CDS-L-elsbetiae_contig785:28144..293291691683874.6373234-CDS-L-elsbetiae_contig785:28144..29329Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig785 28145..29329 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig785.16806.1prot_L-elsbetiae_contig785.16806.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig785 28145..29329 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig785.16806.1

>prot_L-elsbetiae_contig785.16806.1 ID=prot_L-elsbetiae_contig785.16806.1|Name=mRNA_L-elsbetiae_contig785.16806.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=395bp
GAFAIHQAAGCGYNEIVFVLLRSGVEKNALDQGGHSPLILAAGSGHLPTV
ETLLAVGVNINVRTTDSTGIAALHLAVYFGHDAVVSALLRSGAEKDALDA
QGNSPLIFATNRGHLVVVETLLAAGADLTIRGTDDGVCAIHEAAGGGYGE
MVFVLLRSGAEKNALDQRGQTPLMFATRSGHLPVVETLLAAGSDINVRTT
DSTGVAALHLAASFGHGSVVCALLRSGAEKDTLDANGNSPLIWASNRGHL
VVVEILLAAGADLTIRTIDDGAFAILEAAGGGYGEIVSVLLTKGADKESL
NDDGHTPLIIAAGNGHLPVVEILLTAGADVNTRSTADGRSALDMAADQGH
ARILKAILGGRANPNAQDEDGYTALHIAAVADQAEAIEALISAGA
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mRNA from alignment at L-elsbetiae_contig785:28145..29329-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig785.16806.1 ID=mRNA_L-elsbetiae_contig785.16806.1|Name=mRNA_L-elsbetiae_contig785.16806.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1185bp|location=Sequence derived from alignment at L-elsbetiae_contig785:28145..29329- (Laminarionema elsbetiae ELsaHSoW15)
GGTGCGTTTGCTATTCACCAAGCAGCAGGTTGCGGATATAACGAGATAGT ATTCGTACTCCTGCGAAGCGGAGTAGAGAAGAATGCACTCGACCAGGGAG GCCATTCACCACTGATACTCGCAGCCGGCAGCGGGCACCTGCCTACGGTG GAGACCCTGTTGGCCGTCGGCGTCAACATAAACGTTCGTACCACGGACAG CACTGGCATTGCTGCCCTCCACCTTGCTGTTTATTTCGGACATGACGCCG TGGTCTCTGCCCTCTTGCGAAGCGGAGCAGAGAAGGATGCACTCGACGCC CAAGGGAATTCTCCTCTGATATTTGCCACTAACCGAGGCCACCTGGTTGT CGTAGAGACTCTATTGGCCGCCGGTGCCGACCTGACCATCCGCGGTACTG ACGACGGTGTGTGTGCTATTCACGAAGCAGCCGGTGGGGGATATGGCGAG ATGGTGTTCGTACTCTTGCGAAGCGGAGCAGAGAAGAATGCACTCGACCA GCGCGGCCAGACACCACTGATGTTCGCAACCCGCAGCGGGCACCTGCCGG TGGTGGAGACTCTGTTGGCCGCCGGCTCCGACATTAACGTTCGTACCACG GACAGCACTGGCGTTGCTGCTCTCCACCTTGCTGCCTCTTTCGGACATGG ATCCGTAGTATGTGCCCTCTTGCGAAGCGGAGCAGAGAAGGATACACTCG ACGCCAACGGGAATTCTCCTCTGATTTGGGCCTCTAACCGAGGCCACCTG GTTGTCGTGGAGATTCTATTGGCCGCCGGTGCCGACCTGACCATCCGCAC AATTGACGATGGTGCGTTCGCTATTCTCGAAGCAGCCGGTGGGGGATATG GCGAGATAGTATCTGTACTCTTAACGAAAGGGGCAGATAAAGAATCACTC AACGATGATGGCCACACACCGTTGATCATTGCAGCCGGCAACGGGCACCT GCCGGTGGTGGAGATTCTGCTCACTGCCGGTGCCGATGTCAATACCCGCA GCACGGCTGATGGGCGTTCCGCTCTCGATATGGCCGCCGATCAGGGACAC GCTCGCATCCTCAAAGCCATCCTCGGCGGTCGGGCAAACCCCAATGCTCA AGACGAAGACGGATACACGGCTCTGCACATCGCAGCTGTAGCTGACCAGG CGGAAGCTATCGAAGCGCTCATCAGTGCAGGGGCC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig785:28145..29329-

>mRNA_L-elsbetiae_contig785.16806.1 ID=mRNA_L-elsbetiae_contig785.16806.1|Name=mRNA_L-elsbetiae_contig785.16806.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2370bp|location=Sequence derived from alignment at L-elsbetiae_contig785:28145..29329- (Laminarionema elsbetiae ELsaHSoW15)
GGTGCGTTTGCTATTCACCAAGCAGCAGGTTGCGGATATAACGAGATAGT
ATTCGTACTCCTGCGAAGCGGAGTAGAGAAGAATGCACTCGACCAGGGAG
GCCATTCACCACTGATACTCGCAGCCGGCAGCGGGCACCTGCCTACGGTG
GAGACCCTGTTGGCCGTCGGCGTCAACATAAACGTTCGTACCACGGACAG
CACTGGCATTGCTGCCCTCCACCTTGCTGTTTATTTCGGACATGACGCCG
TGGTCTCTGCCCTCTTGCGAAGCGGAGCAGAGAAGGATGCACTCGACGCC
CAAGGGAATTCTCCTCTGATATTTGCCACTAACCGAGGCCACCTGGTTGT
CGTAGAGACTCTATTGGCCGCCGGTGCCGACCTGACCATCCGCGGTACTG
ACGACGGTGTGTGTGCTATTCACGAAGCAGCCGGTGGGGGATATGGCGAG
ATGGTGTTCGTACTCTTGCGAAGCGGAGCAGAGAAGAATGCACTCGACCA
GCGCGGCCAGACACCACTGATGTTCGCAACCCGCAGCGGGCACCTGCCGG
TGGTGGAGACTCTGTTGGCCGCCGGCTCCGACATTAACGTTCGTACCACG
GACAGCACTGGCGTTGCTGCTCTCCACCTTGCTGCCTCTTTCGGACATGG
ATCCGTAGTATGTGCCCTCTTGCGAAGCGGAGCAGAGAAGGATACACTCG
ACGCCAACGGGAATTCTCCTCTGATTTGGGCCTCTAACCGAGGCCACCTG
GTTGTCGTGGAGATTCTATTGGCCGCCGGTGCCGACCTGACCATCCGCAC
AATTGACGATGGTGCGTTCGCTATTCTCGAAGCAGCCGGTGGGGGATATG
GCGAGATAGTATCTGTACTCTTAACGAAAGGGGCAGATAAAGAATCACTC
AACGATGATGGCCACACACCGTTGATCATTGCAGCCGGCAACGGGCACCT
GCCGGTGGTGGAGATTCTGCTCACTGCCGGTGCCGATGTCAATACCCGCA
GCACGGCTGATGGGCGTTCCGCTCTCGATATGGCCGCCGATCAGGGACAC
GCTCGCATCCTCAAAGCCATCCTCGGCGGTCGGGCAAACCCCAATGCTCA
AGACGAAGACGGATACACGGCTCTGCACATCGCAGCTGTAGCTGACCAGG
CGGAAGCTATCGAAGCGCTCATCAGTGCAGGGGCCGGTGCGTTTGCTATT
CACCAAGCAGCAGGTTGCGGATATAACGAGATAGTATTCGTACTCCTGCG
AAGCGGAGTAGAGAAGAATGCACTCGACCAGGGAGGCCATTCACCACTGA
TACTCGCAGCCGGCAGCGGGCACCTGCCTACGGTGGAGACCCTGTTGGCC
GTCGGCGTCAACATAAACGTTCGTACCACGGACAGCACTGGCATTGCTGC
CCTCCACCTTGCTGTTTATTTCGGACATGACGCCGTGGTCTCTGCCCTCT
TGCGAAGCGGAGCAGAGAAGGATGCACTCGACGCCCAAGGGAATTCTCCT
CTGATATTTGCCACTAACCGAGGCCACCTGGTTGTCGTAGAGACTCTATT
GGCCGCCGGTGCCGACCTGACCATCCGCGGTACTGACGACGGTGTGTGTG
CTATTCACGAAGCAGCCGGTGGGGGATATGGCGAGATGGTGTTCGTACTC
TTGCGAAGCGGAGCAGAGAAGAATGCACTCGACCAGCGCGGCCAGACACC
ACTGATGTTCGCAACCCGCAGCGGGCACCTGCCGGTGGTGGAGACTCTGT
TGGCCGCCGGCTCCGACATTAACGTTCGTACCACGGACAGCACTGGCGTT
GCTGCTCTCCACCTTGCTGCCTCTTTCGGACATGGATCCGTAGTATGTGC
CCTCTTGCGAAGCGGAGCAGAGAAGGATACACTCGACGCCAACGGGAATT
CTCCTCTGATTTGGGCCTCTAACCGAGGCCACCTGGTTGTCGTGGAGATT
CTATTGGCCGCCGGTGCCGACCTGACCATCCGCACAATTGACGATGGTGC
GTTCGCTATTCTCGAAGCAGCCGGTGGGGGATATGGCGAGATAGTATCTG
TACTCTTAACGAAAGGGGCAGATAAAGAATCACTCAACGATGATGGCCAC
ACACCGTTGATCATTGCAGCCGGCAACGGGCACCTGCCGGTGGTGGAGAT
TCTGCTCACTGCCGGTGCCGATGTCAATACCCGCAGCACGGCTGATGGGC
GTTCCGCTCTCGATATGGCCGCCGATCAGGGACACGCTCGCATCCTCAAA
GCCATCCTCGGCGGTCGGGCAAACCCCAATGCTCAAGACGAAGACGGATA
CACGGCTCTGCACATCGCAGCTGTAGCTGACCAGGCGGAAGCTATCGAAG
CGCTCATCAGTGCAGGGGCC
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