|
|
Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 1338 |
| Cds size | 867 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622816867.3585546-UTR-L-elsbetiae_contig7828:1327..1634 | 1622816867.3585546-UTR-L-elsbetiae_contig7828:1327..1634 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig7828 1328..1634 - |
| 1691683873.1448095-UTR-L-elsbetiae_contig7828:1327..1634 | 1691683873.1448095-UTR-L-elsbetiae_contig7828:1327..1634 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig7828 1328..1634 - |
| 1622816867.4120593-UTR-L-elsbetiae_contig7828:3186..3350 | 1622816867.4120593-UTR-L-elsbetiae_contig7828:3186..3350 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig7828 3187..3350 - |
| 1691683873.1857607-UTR-L-elsbetiae_contig7828:3186..3350 | 1691683873.1857607-UTR-L-elsbetiae_contig7828:3186..3350 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig7828 3187..3350 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622816867.3701622-CDS-L-elsbetiae_contig7828:1634..1964 | 1622816867.3701622-CDS-L-elsbetiae_contig7828:1634..1964 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig7828 1635..1964 - |
| 1691683873.1544316-CDS-L-elsbetiae_contig7828:1634..1964 | 1691683873.1544316-CDS-L-elsbetiae_contig7828:1634..1964 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig7828 1635..1964 - |
| 1622816867.3869317-CDS-L-elsbetiae_contig7828:2278..2710 | 1622816867.3869317-CDS-L-elsbetiae_contig7828:2278..2710 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig7828 2279..2710 - |
| 1691683873.164136-CDS-L-elsbetiae_contig7828:2278..2710 | 1691683873.164136-CDS-L-elsbetiae_contig7828:2278..2710 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig7828 2279..2710 - |
| 1622816867.399126-CDS-L-elsbetiae_contig7828:3081..3186 | 1622816867.399126-CDS-L-elsbetiae_contig7828:3081..3186 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig7828 3082..3186 - |
| 1691683873.177305-CDS-L-elsbetiae_contig7828:3081..3186 | 1691683873.177305-CDS-L-elsbetiae_contig7828:3081..3186 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig7828 3082..3186 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7828.16784.1 >prot_L-elsbetiae_contig7828.16784.1 ID=prot_L-elsbetiae_contig7828.16784.1|Name=mRNA_L-elsbetiae_contig7828.16784.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=289bp
MRVAAVQQHAAELVVDKPGTSLENDFRFQAVAFEQGEDNSKFRMKQIMKK
RPDKRDLLALRFLLEEAVHKGFLHGEVERATRILEWEISRAEIVIGDQAA
ARSAGKCSRKASSCPRGSFPLVSGCEIATCVHLPTGADNPPTTLAEKEAF
EKDVPALAASSDLKHFHKLLKGMVKERKKASAGCNEAIMHLLHEGKLRLD
GADQPALHFFVELARYRGYRGKGVNYGMEPSARHMAEVSSRFHRVSREVF
STSVHCKMYICICGVCLNSSAFYHVAVSLLLPVCGWYW* back to topmRNA from alignment at L-elsbetiae_contig7828:1328..3350- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig7828.16784.1 ID=mRNA_L-elsbetiae_contig7828.16784.1|Name=mRNA_L-elsbetiae_contig7828.16784.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2023bp|location=Sequence derived from alignment at L-elsbetiae_contig7828:1328..3350- (Laminarionema elsbetiae ELsaHSoW15)
ACACCTCCCCTTGTTATCATCCCCACAAATTCCAAAGTATCTCCCGCAGA
ACTGCAGCAATATTTTCTCGCCGGCAGTCTAGCAGTAATAACCCCCCCCC
CCCTGGTGCCACACCCTCTGCTGCTGCTTTGTTCTGTCGCCCACAGGGGG
ATACCGAAGCTGCTATGAGAGTCGCGGCCGTTCAGCAGCACGCAGCTGAG
TTGGTTGTAGACAAGCCCGGGACATCGCTCGAGAATGACTTCCGGTTTCA
GGCAGTTGCCTTCGAACAGGTATGCATGAGTCAATAGAGAAAGAGAGAAA
CCAATTGACCAGAGAAAAGGCTCTGTCTGTGGCGCACTTGCTTGGTTTCG
ACTAGCACAATCACAAGCGTAGTCAGGCACGGACAGTATCCCCAAGGCGG
AGGATGAAGTGCTTAGTATAGCAGCTCTCTCAATACGCATGCAAGTTTTG
GAAGACAAACAAAGGCTAGACCAGGCGCCTACAAGTTTCAACGACATGAC
GGTCTTGGAAAACTCTATTTAAAAGTACTGCTGTCGAACAGTAGCACACG
GGACTGTTACTCACACAGTTTTTTTTGTCCGCTGACGTAGCTCATGTTTT
CGATGGCGGTGGGCTCCCTCTTTCCACCTTTTGTTTCCAGGGAGAGGACA
ACAGCAAGTTCCGAATGAAACAAATAATGAAGAAACGCCCAGACAAACGA
GACCTGCTAGCCCTGCGCTTTCTTCTGGAGGAGGCTGTGCACAAAGGCTT
TCTGCATGGTGAGGTCGAGAGAGCTACCCGAATCCTGGAGTGGGAGATCT
CCAGGGCAGAAATCGTGATTGGTGACCAAGCAGCGGCCCGTTCGGCTGGC
AAGTGCTCCCGAAAGGCTAGCAGCTGCCCGCGGGGTTCCTTCCCACTCGT
CAGTGGCTGCGAGATCGCCACCTGCGTGCACTTGCCGACGGGAGCAGACA
ACCCGCCGACCACGCTTGCCGAGAAAGAAGCTTTCGAGAAGGATGTTCCT
GCCTTGGCCGCGTCGTCGGATCTGAAGCACTTTCACAAGCTCCTCAAGGG
GATGGTAAAAGAGAGAAAGAAGGTACGTATCCACCGATGACAAACATGTT
TCTAGCCTTAGGTCGGCGATGACGTTTCGACCTGCTTGTAGGCAAATCCG
TACGTGGGTCGAGTGGAATTTGTAGGGCTCCCTGACTTTTGGCCCTGCAA
GCTCTGATATTGAAGATATCCTGTGGAATCGAGAAATTGGGTTGGAGGAG
AGGAAGTGCCGCGGCGACGTACAACATAACCAATCGCGCGTGGCATTGTT
TGATGGTTAGTTGTCCGCACCAGCTAGCGAGCATGCCATGACCTTCACCC
CACCCACGCTCGGCCCGACTTTGAATTGTTGTACAGGCGTCCGCGGGTTG
CAACGAGGCGATCATGCACCTTCTTCATGAAGGCAAGTTGAGATTGGACG
GTGCAGACCAACCTGCTCTTCACTTCTTCGTGGAGCTTGCTCGATACAGA
GGGTACAGGGGAAAGGGTGTCAACTACGGCATGGAGCCCTCGGCGCGACA
CATGGCAGAGGTAAGCTCCCGGTTCCATCGTGTGTCGCGGGAGGTGTTTT
CGACTAGCGTACACTGCAAAATGTACATCTGTATCTGCGGGGTCTGCCTA
AATAGTTCAGCCTTTTACCACGTTGCTGTGTCGTTGTTGTTGCCAGTTTG
TGGGTGGTATTGGTGATGATGGTGTTGCAAGTCGTTTTTCGTGAGGACGT
TCCATCTACAGTGGTGCACGCGGACGAATCGGTCAGCATAAAATCCCTCT
CTCTCTCTCCTTGCCTTCCTGCTGGTGATCGCAACTTCCCCCTTTTACAT
AATTCCCAATGCTCTTCTTCTGCGGCTACACCCTCTACAGCAATCATCTC
ACTGCTCATGTCTTACATTTAGAAAATTGGTGACTACGTATTGTACCGCT
TCCCGTCTCCATTTCTTGTCTGTCTGTCTGTCTGTCTGTCTATCTGTCTG
TCTGTCTGTCTATGTGTCTCTCT back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig7828:1328..3350- >mRNA_L-elsbetiae_contig7828.16784.1 ID=mRNA_L-elsbetiae_contig7828.16784.1|Name=mRNA_L-elsbetiae_contig7828.16784.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1734bp|location=Sequence derived from alignment at L-elsbetiae_contig7828:1328..3350- (Laminarionema elsbetiae ELsaHSoW15)
ATGAGAGTCGCGGCCGTTCAGCAGCACGCAGCTGAGTTGGTTGTAGACAA
GCCCGGGACATCGCTCGAGAATGACTTCCGGTTTCAGGCAGTTGCCTTCG
AACAGATGAGAGTCGCGGCCGTTCAGCAGCACGCAGCTGAGTTGGTTGTA
GACAAGCCCGGGACATCGCTCGAGAATGACTTCCGGTTTCAGGCAGTTGC
CTTCGAACAGGGAGAGGACAACAGCAAGTTCCGAATGAAACAAATAATGA
AGAAACGCCCAGACAAACGAGACCTGCTAGCCCTGCGCTTTCTTCTGGAG
GAGGCTGTGCACAAAGGCTTTCTGCATGGTGAGGTCGAGAGAGCTACCCG
AATCCTGGAGTGGGAGATCTCCAGGGCAGAAATCGTGATTGGTGACCAAG
CAGCGGCCCGTTCGGCTGGCAAGTGCTCCCGAAAGGCTAGCAGCTGCCCG
CGGGGTTCCTTCCCACTCGTCAGTGGCTGCGAGATCGCCACCTGCGTGCA
CTTGCCGACGGGAGCAGACAACCCGCCGACCACGCTTGCCGAGAAAGAAG
CTTTCGAGAAGGATGTTCCTGCCTTGGCCGCGTCGTCGGATCTGAAGCAC
TTTCACAAGCTCCTCAAGGGGATGGTAAAAGAGAGAAAGAAGGGAGAGGA
CAACAGCAAGTTCCGAATGAAACAAATAATGAAGAAACGCCCAGACAAAC
GAGACCTGCTAGCCCTGCGCTTTCTTCTGGAGGAGGCTGTGCACAAAGGC
TTTCTGCATGGTGAGGTCGAGAGAGCTACCCGAATCCTGGAGTGGGAGAT
CTCCAGGGCAGAAATCGTGATTGGTGACCAAGCAGCGGCCCGTTCGGCTG
GCAAGTGCTCCCGAAAGGCTAGCAGCTGCCCGCGGGGTTCCTTCCCACTC
GTCAGTGGCTGCGAGATCGCCACCTGCGTGCACTTGCCGACGGGAGCAGA
CAACCCGCCGACCACGCTTGCCGAGAAAGAAGCTTTCGAGAAGGATGTTC
CTGCCTTGGCCGCGTCGTCGGATCTGAAGCACTTTCACAAGCTCCTCAAG
GGGATGGTAAAAGAGAGAAAGAAGGCGTCCGCGGGTTGCAACGAGGCGAT
CATGCACCTTCTTCATGAAGGCAAGTTGAGATTGGACGGTGCAGACCAAC
CTGCTCTTCACTTCTTCGTGGAGCTTGCTCGATACAGAGGGTACAGGGGA
AAGGGTGTCAACTACGGCATGGAGCCCTCGGCGCGACACATGGCAGAGGT
AAGCTCCCGGTTCCATCGTGTGTCGCGGGAGGTGTTTTCGACTAGCGTAC
ACTGCAAAATGTACATCTGTATCTGCGGGGTCTGCCTAAATAGTTCAGCC
TTTTACCACGTTGCTGTGTCGTTGTTGTTGCCAGTTTGTGGGTGGTATTG
GTGAGCGTCCGCGGGTTGCAACGAGGCGATCATGCACCTTCTTCATGAAG
GCAAGTTGAGATTGGACGGTGCAGACCAACCTGCTCTTCACTTCTTCGTG
GAGCTTGCTCGATACAGAGGGTACAGGGGAAAGGGTGTCAACTACGGCAT
GGAGCCCTCGGCGCGACACATGGCAGAGGTAAGCTCCCGGTTCCATCGTG
TGTCGCGGGAGGTGTTTTCGACTAGCGTACACTGCAAAATGTACATCTGT
ATCTGCGGGGTCTGCCTAAATAGTTCAGCCTTTTACCACGTTGCTGTGTC
GTTGTTGTTGCCAGTTTGTGGGTGGTATTGGTGA back to top
|