mRNA_L-elsbetiae_contig7819.16769.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7819.16769.1 vs. uniprot
Match: D7FZR6_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZR6_ECTSI) HSP 1 Score: 290 bits (743), Expect = 1.470e-84 Identity = 177/308 (57.47%), Postives = 209/308 (67.86%), Query Frame = 1 Query: 1 QVIFHMTSTLLQFGAVMLVVMIGFTMALHVLFRDLEDFSETLLKLFEAMLGGTEIFGDFSGGRYDTVATILVVVYLFIVTMMLLNLLIAILSTSHARVQESAGGTFKVSKARIIDHYGTVVDEDLLPTPFNLMQLVVSMAVFFVTFLY-FFPKAKKEHP-------DVYGRAFWRKVCEAARERGKRAKRAFGVVMFWFVLGLVAVTGEAILWGLSGFSYAQYVLYVEVRSV----LYLGFNSRADFTRGSS-----------------RMLQGVLIALACSYDWGLTSLAWFLILLWCILVAPLWLF 837 QVIF MT+TLLQFGAVMLVVMIGFTMALHV+FRD+EDF +TLL LF+AMLG T F +FSGGRYD VATILVVVYLFIVT+MLLNLLIAILST HA+VQE+ GG FKVSKARII HY TVVD D+LP PFNL+QL++S+ V +TF Y F +AK+E D +GR FW V E AR+R + A+RAFG +++W VLG VAV G AILWGLSGF YAQY + + + + GF +D + RMLQG+ I +W LAWFL L CIL AP LF Sbjct: 866 QVIFRMTATLLQFGAVMLVVMIGFTMALHVIFRDVEDFGDTLLGLFKAMLGETGFFDEFSGGRYDPVATILVVVYLFIVTVMLLNLLIAILSTEHAQVQENTGGAFKVSKARIIAHYRTVVDNDVLPAPFNLVQLLLSLGVIAMTFPYCFLLEAKREQSETERPAIDEHGRLFWGNVWEGARQRHRGARRAFGQLVWWLVLGPVAVAGGAILWGLSGFFYAQYAWHSWLSTTDEQDCFFGFLLESDEEPDAEDMSKEVVMFGSCGSPLWRMLQGLGIVFRFLLEWIGVVLAWFLTFLLCILGAPCCLF 1173
BLAST of mRNA_L-elsbetiae_contig7819.16769.1 vs. uniprot
Match: A0A6H5KBU4_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBU4_9PHAE) HSP 1 Score: 276 bits (705), Expect = 3.710e-79 Identity = 172/304 (56.58%), Postives = 198/304 (65.13%), Query Frame = 1 Query: 1 QVIFHMTSTLLQFGAVMLVVMIGFTMALHVLFRDLEDFSETLLKLFEAMLGGTEIFGDFSGGRYDTVATILVVVYLFIVTMMLLNLLIAILSTSHARVQESAGGTFKVSKARIIDHYGTVVDEDLLPTPFNLMQLVVSMAVFFVTFLYFFP-KAKKEHP-------DVYGRAFWRKVCEAARERGKRAKRAFGVVMFWFVLGLVAVTGEAILWGLSGFSYAQYVLYVEVRSV----LYLGFNSRAD------------FTRGSS-----RMLQGVLIALACSYDWGLTSLAWFLILLWCILVAP 825 QVIF MT+TLLQFGAVMLVVMIGFTMALHV FRD+ DF +TLL LF+AMLG T IF +FSGGRYD VATILVVVYL IVT+MLLNLLIAILST HA+V E+ FKVSKARII HY TVVD D+LP PFNL+QL++S+ V +T Y+F +AK+EH D GR FW V E AR R + A+RAFG ++W VLG VAV G A+LW LSG YAQY + + + + GF D GS RMLQGV I W LAWFLI L CIL AP Sbjct: 883 QVIFRMTATLLQFGAVMLVVMIGFTMALHVFFRDVADFGDTLLGLFKAMLGETGIFDEFSGGRYDPVATILVVVYLCIVTVMLLNLLIAILSTEHAQVMENTAEAFKVSKARIIAHYRTVVDNDVLPAPFNLVQLILSLGVIVLTLPYYFLLEAKREHSETERPATDEDGRLFWGNVWEGARHRHRSARRAFGQFVWWLVLGSVAVAGGAMLWSLSGLFYAQYACHSWLSTTDEQNSFFGFLQEGDEEPDEEDTAKDVVVFGSCGSPLWRMLQGVRIVFRSVLQWIGVVLAWFLIFLLCILGAP 1186
BLAST of mRNA_L-elsbetiae_contig7819.16769.1 vs. uniprot
Match: A0A6H5JG42_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG42_9PHAE) HSP 1 Score: 191 bits (484), Expect = 7.770e-50 Identity = 129/278 (46.40%), Postives = 161/278 (57.91%), Query Frame = 1 Query: 4 VIFHMTSTLLQFGAVMLVVMIGFTMALHVLFRDLEDFSETLLKLFEAMLGGTEIFGDFSGGRYDTVATILVVVYLFIVTMMLLNLLIAILSTSHARVQESAGGTFKVSKARIIDHYGTVVDEDLLPTPFNLMQLVVSMAVFFVTFLYFFPKAKKEHPDVYGRAFWRKVCEAARERGKRAKRAFGVVMFWFVLGLVAVTGEAILWGLSGFSYAQYVLYVEVRSVLYLGFNSRADFTRGSSRMLQGVLIALACSYDWGLTSLAWFLILLWCILVAPLWLF 837 VIF MT+ LL+FG VM VVMIGFTMA HVLFRD + F E+ L+LF+AM G T F FSG YD VAT+L+VVYL IVT++LLNLL+AILSTSH++VQ++ FK S AR++DHY VV D+LP PFNL+QLVV + V G R+ RE +R +A G V+FW VLG VAV G +LW V +YL R G + L LI+L C Y +F+I LWCIL AP++LF Sbjct: 688 VIFRMTTVLLKFGFVMAVVMIGFTMAFHVLFRDFDSFGESFLELFKAMFGETTFFNAFSGDTYDAVATMLLVVYLSIVTILLLNLLVAILSTSHSKVQKNIDREFKASIARMMDHYQLVVTNDILPAPFNLLQLVVWPIAWCV--------GGCCGRSTSGSQSTRQELNRGREAYERGNKAIGPVVFWVVLGPVAVVGGTLLW------------IVSTPLSVYLW---RKHHREGDRKRLS--LISLGCRY--------FFIIPLWCILGAPVYLF 932
BLAST of mRNA_L-elsbetiae_contig7819.16769.1 vs. uniprot
Match: A0A6H5KJG3_9PHAE (Ion_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KJG3_9PHAE) HSP 1 Score: 180 bits (456), Expect = 4.690e-46 Identity = 109/209 (52.15%), Postives = 136/209 (65.07%), Query Frame = 1 Query: 1 QVIFHMTSTLLQFGAVMLVVMIGFTMALHVLFRDLEDFSETLLKLFEAMLGGTEIFGDFSGGRYDTVATILVVVYLFIVTMMLLNLLIAILSTSHARVQESAGGTFKVSKARIIDHYGTVVDEDLLPTPFNLMQLVVSMAVFFVTFLYFFPKAKKEHPDVYGRAFWRKVCEAARERGKRA----KRAFGVVMFWFVLGLVAVTGEAILW 615 +V+F MT LL+FG VM V+++GFTMA HVLFRD + F E+ L LF+AMLG T+ F FSG YD VAT L+VVYLFIVT+MLLNLL+AILSTSHA+V E+ FKVS AR++DHY VV D+LPTPFNL+QL+V +P A H + + R R K A +A G V+FW VLG VAV G ++LW Sbjct: 879 RVVFRMTRILLKFGFVMAVIVLGFTMAFHVLFRDFDSFGESFLDLFKAMLGDTDFFKVFSGDTYDVVATFLLVVYLFIVTVMLLNLLVAILSTSHAQVAENIEREFKVSIARMMDHYQLVVTNDMLPTPFNLLQLIV------------WPIAWCLHGCCGRNSGVSGNTQQTRNRSKEAYACGSKAIGPVVFWVVLGPVAVIGGSLLW 1075
BLAST of mRNA_L-elsbetiae_contig7819.16769.1 vs. uniprot
Match: A0A6H5JUV2_9PHAE (Ion_trans domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUV2_9PHAE) HSP 1 Score: 167 bits (422), Expect = 6.110e-43 Identity = 105/208 (50.48%), Postives = 130/208 (62.50%), Query Frame = 1 Query: 4 VIFHMTSTLLQFGAVMLVVMIGFTMALHVLFRDLEDFSETLLKLFEAMLGGTEIFGDFSGGRYDTVATILVVVYLFIVTMMLLNLLIAILSTSHARVQESAGGTFKVSKARIIDHYGTVVDEDLLPTPFNLMQLVVSMAVFFVTFLYFFPKAKKEHPDVYGRAFWRKVCEAARERGKRA----KRAFGVVMFWFVLGLVAVTGEAILW 615 V+F MT LL+FG VM V+++GF MA HV FRD + F E+ L LF+AMLG + F FSG YD VAT L+VV LFIVT+MLLNLL+AILSTSHA+V E+ FKVS AR++DHY VV D+LPTPFNL+QLVV +P A H + + R R K A +A V+FW VLG VAV G ++LW Sbjct: 154 VVFRMTRILLKFGFVMAVILLGFIMAFHVQFRDFDSFGESFLDLFKAMLGDNDFFKVFSGDTYDFVATFLLVVGLFIVTVMLLNLLVAILSTSHAQVAENIDREFKVSIARMMDHYQLVVTNDMLPTPFNLLQLVV------------WPIAWCLHGCCGRNSGVSGNTQQTRNRSKEAYACGSKAIEPVVFWVVLGPVAVNGGSLLW 349
BLAST of mRNA_L-elsbetiae_contig7819.16769.1 vs. uniprot
Match: D7FLB1_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLB1_ECTSI) HSP 1 Score: 169 bits (429), Expect = 1.740e-42 Identity = 112/278 (40.29%), Postives = 155/278 (55.76%), Query Frame = 1 Query: 1 QVIFHMTSTLLQFGAVMLVVMIGFTMALHVLFRDLEDFSETLLKLFEAMLGGTEIFGDFSGGRYDTVATILVVVYLFIVTMMLLNLLIAILSTSHARVQESAGGTFKVSKARIIDHYGTVVDEDLLPTPFNLMQLVVSMAVFFVTFLYFFPKAKKEHPDVYGRAFWRKVCEAARERGKRAKRAFGVVMFWFVLGLVAVTGEAILWGLSGFSYAQYVLYVEVRSVLYLGFNSRADFTRGSSRMLQGVLIALACSYDWGLTSLAWFLILLWCILVAPLWL 834 QV+F MT+ L++FG V++VVM+GF M+ H LF D++ F T L LF+AMLG + FG F G +YD+VAT L V+YL ++ +MLLNLLIA+LSTSH++V+ A FKVSKARII+HY VVD LLP PFNL+QL++S+ V D G+ RA+ A G + FW LG VA +LW LS +A +V + F S+A RG+ + G + + ++ WC+L APL+L Sbjct: 928 QVVFSMTAELVKFGVVIIVVMLGFAMSFHALFGDVDTFGGTCLTLFKAMLGEVDFFGSFPGNQYDSVATALFVIYLVVIAVMLLNLLIAVLSTSHSKVEGKADQEFKVSKARIIEHYRMVVDMCLLPPPFNLVQLILSLPVMV--------------RDRSGQG----------TASTRAQEAVGRMAFWLALGPVAAACGTVLWVLSSL-FAPFVWHTH--------FYSKAQARRGALSV--------------GSLLVRYLIVFFWCVLGAPLYL 1158
BLAST of mRNA_L-elsbetiae_contig7819.16769.1 vs. uniprot
Match: A0A6H5LDE6_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDE6_9PHAE) HSP 1 Score: 133 bits (335), Expect = 3.920e-30 Identity = 85/223 (38.12%), Postives = 127/223 (56.95%), Query Frame = 1 Query: 1 QVIFHMTSTLLQFGAVMLVVMIGFTMALHVLFRDLEDFSETLLKLFEAMLGGTEIFGDFSGGRYDTVATILVVVYLFIVTMMLLNLLIAILSTSHARVQESAGGTFKVSKARIIDHYGTVVDEDLLPTPFNLMQLVVSMAVFFVTFLYFFPKAKKEHPDVYGRAFWRKVC-------------EAARERG--KRAKRAFGVVMFWFVLGLVAVTGEAILWGLS 624 QV+F MT L +FG +ML+VM+GF + + L+++ + E +F A LG T+ DFSG +D VAT+L+VVYL ++T+M+LNLL+A+LST+HA+V +AG +KV++AR+I HY VV+ D LP PFNL Q + ++ F V L F + + R+R K A+ FG + FW +LG +AV +LW +S Sbjct: 1246 QVMFSMTGLLAKFGMIMLLVMLGFVTSFYSLYKETTAYGEVWKAIFRATLGETDYLDDFSGTTFDGVATVLLVVYLVLLTIMMLNLLVAVLSTAHAKVDANAGLEYKVTRARLIQHYVNVVEIDRLPPPFNLFQWIFALP-FMVLDLCFRTSRRPSTASTNSAXXXXXXXXXXXXXXSINGNEKTKRDRSYFKVARGFFGRLAFWAMLGPIAVLAGWVLWMIS 1467
BLAST of mRNA_L-elsbetiae_contig7819.16769.1 vs. uniprot
Match: A0A6H5JMG8_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMG8_9PHAE) HSP 1 Score: 127 bits (319), Expect = 4.140e-28 Identity = 86/210 (40.95%), Postives = 118/210 (56.19%), Query Frame = 1 Query: 1 QVIFHMTSTLLQFGAVMLVVMIGFTMALHVLFRDL--EDFSETLLKLFEAMLGGTEIFGDFSGGRYDTVATILVVVYLFIVTMMLLNLLIAILSTSHARVQESAGGTFKVSKARIIDHYGTVVDEDLLPTPFNLMQLVVSMAVFFVTFLYFFPKAKKEHPDVYGRAFWRKVCEAARERGKRAKRAFGVVMFWFVLGLVAVTGEAILWGLS 624 QV++ M S L QF VM VV++GF M+ LFRD+ E LL F+AMLG +F DF G ++D AT+L+V YL ++T+MLLNLLIA+LST+H +V+E+ +VS+AR+ HY VV D LP PFNL QLVV + V L+ +P A+R G ++FW VLG A+ G +W +S Sbjct: 780 QVLYSMASELGQFFVVMGVVILGFAMSFFALFRDVKGETLRGALLDAFQAMLGEVGLFDDFVGEKHDLAATVLLVSYLLVMTIMLLNLLIAVLSTAHGKVEEAV--LIRVSRARVYTHYRWVVATDALPAPFNLAQLVVLLPCQMVDLLF----KSNTYPI--------------------ARRGVGRIVFWLVLGPGAILGGIFVWLVS 963
BLAST of mRNA_L-elsbetiae_contig7819.16769.1 vs. uniprot
Match: D7FR83_ECTSI (Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR83_ECTSI) HSP 1 Score: 124 bits (312), Expect = 3.240e-27 Identity = 85/210 (40.48%), Postives = 118/210 (56.19%), Query Frame = 1 Query: 1 QVIFHMTSTLLQFGAVMLVVMIGFTMALHVLFRDL--EDFSETLLKLFEAMLGGTEIFGDFSGGRYDTVATILVVVYLFIVTMMLLNLLIAILSTSHARVQESAGGTFKVSKARIIDHYGTVVDEDLLPTPFNLMQLVVSMAVFFVTFLYFFPKAKKEHPDVYGRAFWRKVCEAARERGKRAKRAFGVVMFWFVLGLVAVTGEAILWGLS 624 QV++ M S L QF VM VV++GF M+ LFRD+ E LL F+AMLG +F DF G ++D AT+L+V YL ++T+MLLNLLIA+LST+H +V+E+ +VS+AR+ HY VV D LP PFNL QLVV + V L+ +P A+R G ++FW +LG A+ G +W +S Sbjct: 689 QVLYGMASELGQFFVVMGVVILGFAMSFFALFRDVKGETIRGALLDAFQAMLGEVGLFDDFVGEKHDLAATVLLVSYLVVMTIMLLNLLIAVLSTAHGKVEEAV--LIRVSRARVYTHYRWVVATDALPAPFNLAQLVVLLPCKMVDVLF----KGNTYPI--------------------ARRGVGRIVFWLLLGPGAILGGVFVWLVS 872
BLAST of mRNA_L-elsbetiae_contig7819.16769.1 vs. uniprot
Match: A0A6H5JCX0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCX0_9PHAE) HSP 1 Score: 120 bits (300), Expect = 7.980e-26 Identity = 83/207 (40.10%), Postives = 108/207 (52.17%), Query Frame = 1 Query: 4 VIFHMTSTLLQFGAVMLVVMIGFTMALHVLFRDLEDFSETLLKLFEAMLGGTEIFGDFSGGRYDTVATILVVVYLFIVTMMLLNLLIAILSTSHARVQESAGGTFKVSKARIIDHYGTVVDEDLLPTPFNLMQLVVSMAVFFVTFLYFFPKAKKEHPDVYGRAFWRKVCEAARERGKRAKRAFGVVMFWFVLGLVAVTGEAILWGLS 624 VIF MT+ L++FG VMLVVM+GF M+LHVL RD + F ET + LF+A LG + F S +LNLL+AIL+ SH++VQE+ FKVSKAR+I V+ D LP PFN+ QL+ S V + R+R AK+A G + WFVLGL+A G +ILW LS Sbjct: 316 VIFAMTAQLVRFGIVMLVVMVGFAMSLHVLIRDSKSFGETFVALFKATLGDVDYFTASS----------------------VLNLLVAILTVSHSKVQENVQREFKVSKARMIQRCRWTVENDWLPAPFNVAQLLFSGQYALV------------------------MPSFRRKRYDEAKQAIGQAVSWFVLGLMAFVGGSILWILS 476 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7819.16769.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7819.16769.1 >prot_L-elsbetiae_contig7819.16769.1 ID=prot_L-elsbetiae_contig7819.16769.1|Name=mRNA_L-elsbetiae_contig7819.16769.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=301bp MTSTLLQFGAVMLVVMIGFTMALHVLFRDLEDFSETLLKLFEAMLGGTEIback to top mRNA from alignment at L-elsbetiae_contig7819:3219..4420+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7819.16769.1 ID=mRNA_L-elsbetiae_contig7819.16769.1|Name=mRNA_L-elsbetiae_contig7819.16769.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1202bp|location=Sequence derived from alignment at L-elsbetiae_contig7819:3219..4420+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7819:3219..4420+ >mRNA_L-elsbetiae_contig7819.16769.1 ID=mRNA_L-elsbetiae_contig7819.16769.1|Name=mRNA_L-elsbetiae_contig7819.16769.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1806bp|location=Sequence derived from alignment at L-elsbetiae_contig7819:3219..4420+ (Laminarionema elsbetiae ELsaHSoW15)back to top |