mRNA_L-elsbetiae_contig7786.16733.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig7786.16733.1
Unique NamemRNA_L-elsbetiae_contig7786.16733.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig7786.16733.1 vs. uniprot
Match: D8LDZ2_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDZ2_ECTSI)

HSP 1 Score: 159 bits (403), Expect = 1.900e-40
Identity = 127/382 (33.25%), Postives = 168/382 (43.98%), Query Frame = 2
Query:    2 PLLRAAIY*YLDIVNLLLEEGANLEIATPRNPLLAEK---GLIFPRGTRALHAAAYAGELSVLRALLQSGAQPNAKDGYGCIPLMAACNGRRPATENCVTLVEVLLEAGALPSLADNEGRVALHTAAHWGADDAIEVLVAAAPSTLKYADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTGLEAVGGVEAARAAMKRAVKFNRTKILEKLLGIEGEEMRAWWANSDSPEGLPVLLATAAGCCLAATSVLLAAGADELVFENNGLLASGVIGAVLDEGEKDEAKVAAFCRMLERGPAFRARSYCWPVQTSTALVSISSGGVAKRN---APLDLRIFRPSNHAFFTTRFVRYTRK 1129
            PL  AA    +DI+ LL++ GA+L+  T      A+     L F  GT  LH A     L  LR LL +GA PN  DG GC PLM  C     A    +T                     ALH AA + A D + +L++ APST+   +                                                         D G++AVGG  A   A++R++     +IL+ LL +EGE+ R  WA     +G P L   AA   L A S+LL AGADE         AS  +GA L   +K+    AA CR+LERGPAFRARS+ W  ++S A    +SG V       A LD+RIFRP+ + FF+ RF RY +K
Sbjct:   42 PLFLAANRGRIDILKLLIDNGADLD-GTSSLDKFADGFTGNLPFEGGTTPLHGALAGENLDALRLLLLAGADPNLADGKGCTPLMMTCLKYFRAKNYVLTAXXXXXXXXXXXXXXXXXXXTALHVAATFNAPDLLGLLLSRAPSTVNLPNKKGVTALCYAASEGMEVAVSCLLSAGARDNPSLFANGIGSLLIAVELGHEQVVRVLLDRGVQAVGGELAMSYALRRSILKRFPRILQMLLDVEGEQKRVKWARLRHTDGTPALHLAAACESLVAASILLQAGADEGTANGLDKGASCCVGAALPANKKNPDTSAAVCRLLERGPAFRARSWAWAAESSEA--PAASGTVCSMKGGRATLDVRIFRPTGNQFFSARFSRYCKK 420          
BLAST of mRNA_L-elsbetiae_contig7786.16733.1 vs. uniprot
Match: D8LSK4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSK4_ECTSI)

HSP 1 Score: 129 bits (325), Expect = 1.430e-29
Identity = 109/338 (32.25%), Postives = 153/338 (45.27%), Query Frame = 2
Query:    2 PLLRAAIY*YLDIVNLLLEEGANLEIATPRNPLLAEKGLIFPRGTRALHAAA---YAGELSVLRALLQSGAQPNAKDGYGCIPLMAACNGRRPATENCVTLVEVLLEAGALPSLADNEGRVALHTAAHWGADDAIEVLVAAAP-STLKYA-DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTGLEAVGGVEAARA-AMKRAVKFNRTKILEKLLGIEGEEMRAWWANSDSPEGLPVLLATAAGCCLAATSVLLAAGADELVFENNGLLASGVIGAVLDEGEKDEAKVAAFCRMLERGPAFRARSYCWPV 997
            P++ AA      ++  L+++GA++  +T R          FP G+RA+H A    YAG L  LR L+++GA  N ++  GC PLM AC   +   E  V L   LL+AG   +L D +GR ALH AA+ G +  I+ L++    STL  A                                                           + G++AVGG  A    ++  A +  + +IL  LL  EG+E +  WA      G P++   AA   LA   VLLAAGADE   + +G  A  VIG  L  G  D  + AA  R L+RGPA+RARS+ WPV
Sbjct:   43 PVVFAAAVGSASMIKFLVDKGADINSSTWRPGA-------FPSGSRAIHVAVSSGYAGALDALRELIKAGADLNGRNYQGCTPLMMACRVDKEGAER-VELARELLKAGVDTTLVDADGRAALHYAAYSGNEALIQALLSKGSLSTLNLATQDGKTPLCVAVEFVHCGVVSLLLSAGASQRGLQEGNYPCPFRSAAALGYESILRILCSERGMDAVGGGAAVLPNSLACATRRGKARILRLLLAAEGQERQEHWARRRLVLGRPLVYLAAAYGILANVKVLLAAGADETETDPDGYAAPEVIGGQLPSGTLDPLEAAAIGRELQRGPAYRARSWAWPV 372          
BLAST of mRNA_L-elsbetiae_contig7786.16733.1 vs. uniprot
Match: A0A6H5JK53_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK53_9PHAE)

HSP 1 Score: 128 bits (322), Expect = 3.070e-29
Identity = 117/380 (30.79%), Postives = 165/380 (43.42%), Query Frame = 2
Query:    2 PLLRAAIY*YLDIVNLLLEEGANLEIATPRNPLLAEKGLIFPRGTRALHAAAYAGELSVLRALLQSGAQPNAKDGYGCIPLMAACNGRRPATENCVTLVEVLLEAGALPSLADNEGRVALHTAAHWGADDAIEVLVAAAPSTLKYADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTGLEAVGGVEAARAAMKRAVKFNRTKILEKLLGIEGEEMRAWWANSDSPEGLPVLLATAAGCCLAATSVLLAAGADELVFENNGLLASGVIGAVL-DEGEKDEAKVAAFCRMLERGPAFRARSYCWPVQ---TSTALVSISSGGVAKRNAPLDLRIFRPSNHAFFTTRFVRYTRK 1129
            P++ AA      ++ LL+ +GA+LE               FP G+RA+HAA      + L  LL++GA  N++DG G  PLM          +    L   L + GA P + + +G  A+H AA  G  + + V++   PS L   D                                                         + G+  VGG+ A   ++  AV+  + KILE L+  EGEE R  WA     +G P+ LA AA   + A  VLL+AGA E +    G LAS  +G  L     +   K AA  RML+RGPA+RARSY WP       T+ V++SS      +    ++IFRP+   FF TRF RY  K
Sbjct:   43 PIMGAARNGNAAMLKLLISKGADLETEAR-----------FPAGSRAIHAAISGENPTALSVLLEAGADFNSRDGAGETPLMLTA-----LADTGALLARELFKVGASPFVKNADGMSAMHVAAGLGNLEVMTVILTNTPSALNVLDNKGFTPMGIAALRGQRRAVFHLLSAGASDLGVDEQNAAILWACDGGHPRMVRMML--EHGINRVGGLGAIPNSIGVAVQGRQAKILEMLVSAEGEENRRKWAECRLRDGTPLHLA-AAWVSVRAIHVLLSAGARETLPNGYGKLASEEVGIALRPPARRSPRKEAAVVRMLQRGPAYRARSYGWPTLDGGNGTSDVTLSSRTRGANS--FGVQIFRPTGTRFFATRFARYANK 401          
BLAST of mRNA_L-elsbetiae_contig7786.16733.1 vs. uniprot
Match: D7G4M4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4M4_ECTSI)

HSP 1 Score: 124 bits (310), Expect = 2.900e-27
Identity = 111/368 (30.16%), Postives = 159/368 (43.21%), Query Frame = 2
Query:   38 IVNLLLEEGANLEIATPRNPLLAEKGLIFPRGTRALHAAAYAGELSVLRALLQSGAQPNAKDGYGCIPLMAACNGRRPATENCVTLVEVLLEAGALPSLADNEGRVALHTAAHWGADDAIEVLVAAAPSTLKYADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTGLEAVGGVEAARAAMKRAVKFNRTKILEKLLGIEGEEMRAWWANSDSPEGLPVLLATAAGCCLAATSVLLAAGADELVFENNGLLASGVIGAVLDE-GEKDEAKVAAFCRMLERGPAFRARSYCWPVQ---TSTALVSISSGGVAKRNAPLDLRIFRPSNHAFFTTRFVRYTRK 1129
            ++ LL+ +GANLE               FP G+RA+HAA      + L  LL++GA  N++DG G  PLM          +    L   L + GA P + + +G  A+H AA  G  + + V++   PS L   D                                                         + G+  VGG+ A   ++  AV+  + KILE L+  EGE+ R  WA     +G P+ LA AA   +    VLL+AGA E +    G LA   +G  L     +   K AA  RML+RGPA+RARSY WP       T+ V++SS     ++    ++I+RP+   FF TRF RY  K
Sbjct:  110 MLKLLISKGANLETEAR-----------FPAGSRAIHAAISGENPTALCVLLEAGADFNSRDGAGETPLMLTA-----LADTGALLARELFKVGASPFVKNADGMSAMHVAAGLGNLEVMTVILTNTPSVLNVLDNKGFTPMGIAALRGQRRAVFHLLSAGASDLGVDEQNAAIFWACDGGHPRMVRMML--EHGINRVGGLGAIPNSIGVAVQGRQAKILEMLVSAEGEDNRRKWAECRLRDGTPLHLA-AAWVSVRVMHVLLSAGARETLPNRYGKLAGEEVGIALGPPARRSPRKEAAVVRMLQRGPAYRARSYGWPTLDGGNGTSDVALSSRTRGAKS--FGVQIYRPTGTRFFATRFARYANK 456          
BLAST of mRNA_L-elsbetiae_contig7786.16733.1 vs. uniprot
Match: A0A6H5L2Q3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2Q3_9PHAE)

HSP 1 Score: 106 bits (265), Expect = 1.880e-21
Identity = 115/371 (31.00%), Postives = 163/371 (43.94%), Query Frame = 2
Query:    2 PLLRAAIY*YLDIVNLLLEEGANLEIATPRNPLLAEKGLIFPRGTRALHAAAYAGELSVLRALLQSGAQPNAKDGYGCIPLMAAC-NGRRPATENCVTLVEVLLEAGALPSLADNEGRVALHTAAHWGADDAIEVLVAAAPSTLKYA----DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTGLEAVGGVEAARA---AMKRAVKFNRTKILEKLLGI-EGEEMRAWWANSDSPEGLPVLLATAAGCCLAATSVLLAAGADELVFENNGLLASGVIGAVLDEGEKD---EAKVAAFCRMLERGPAFRARSYCWPVQTSTALVSISSGGVAKRNAPLDLRIFR 1078
            PL+ A+    +++VN LL+ GA +E  T       +    F  G RA H A  +G+L  L  LL++GA  +A +  G   LM AC     P T  CV + + LL+AGA P + D EG+VALH AA  G  + I++L+ A  S+L                                                                 + GLE+VGG  AAR    ++  A K  RT++L+ LL +  G+    +WAN     G P+L   A    +    VLLAAGADE V ++    A  +IG +L  G K     +  AA  R L RGPA+RARS+ WP   + A  +++         PL + IFR
Sbjct:   42 PLMVASGSGSVEVVNFLLQNGAEMEHQT-----WGDDDHRF-LGMRATHWAVTSGKLDTLLVLLKAGAVYDAVNAQGETCLMNACMTDASPPT--CVAMAKALLDAGADPLIEDREGQVALHHAAAQGNPNMIDLLLQAKGSSLSKKLLSHVSRWEHTPLQSALESNQVQAVAHLLSLGARATVDREGRGNLLRRAVVKNSEPIVRVLFEAGLESVGG--AARVMPDSLASAAKAGRTRLLKLLLTVGRGDRTTGYWANYYVWGG-PLLNVAAGYATVDCVGVLLAAGADERVPDDERQTAGDMIGDLLASGSKSASFRSDKAAIRRTLLRGPAYRARSWTWPPLAAGADDAVAFPSGHPEKVPLGVHIFR 401          
BLAST of mRNA_L-elsbetiae_contig7786.16733.1 vs. uniprot
Match: D8LSK8_ECTSI (Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSK8_ECTSI)

HSP 1 Score: 99.8 bits (247), Expect = 1.200e-18
Identity = 98/357 (27.45%), Postives = 142/357 (39.78%), Query Frame = 2
Query:    2 PLLRAAIY*YLDIVNLLLEEGANLEIATPRNPLLAEKGL-IFPRGTRALHAAAYAGELSVLRALLQSGAQPNAKDGYGCIPLMAACNGRRPAT-ENCVTLVEVLLEAGALPSLADNEGRVALHTAAHWGADDAIEVLVAAAPSTLKYADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-DTGLEAVGGVEAARAAMKRAV--KFNRTKILEKLLGIEGEEMRAWWANSDSPEGLPVLLATAAGCCLAATSVLLAAGADELVFENNGLLASGVIGAVLDEGEKDEAKVAAFCRMLERGPAFRARSYCWPVQTSTALVSISSGGVAKRNAP 1057
            P++ AA    + +  LL++  A++++ +  N L    GL +  +G RALH A     + V R LL++GA P++ +G G  PLM  C     A  E    +                  + AL  AA     + I++L+  AP+TL  A                                                           D G++A+GG +    A+  A   +  R  I+  LL  EG E    WA     E  PVL +  +   ++AT VLLAAGADE     +G  A  V+G      ++D AK  A  RMLERGPA+RARS+ WP          +    A   AP
Sbjct:  146 PIIAAAASCKVGMAELLIKRKADVDLGS-LNDLRCSDGLEVLGKGVRALHVAINHYNVDVFRLLLKAGADPDSANGKGLTPLMLTCILEDSARGEQRAVMAREXXXXXXXXXXXXXXXKTALGFAAARDQTNLIDILLQKAPTTLNRATPDGLTPLYAAAMSGKGKAVSHLLSAGARQPPASAEKDMCPLVAAVRENHQEVVRVLLTDRGMKAIGGADVIPRAVGAAASARKGRASIVRMLLSAEGHEREGHWARCRYKED-PVLHSAVSFGNISATRVLLAAGADETAENEDGRPAREVVGFNAPSLQRDPAKKGAIVRMLERGPAYRARSWAWPATARAYTAGHTCAAAATTAAP 500          
BLAST of mRNA_L-elsbetiae_contig7786.16733.1 vs. uniprot
Match: D8LME7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LME7_ECTSI)

HSP 1 Score: 77.0 bits (188), Expect = 5.560e-12
Identity = 62/210 (29.52%), Postives = 84/210 (40.00%), Query Frame = 2
Query:  125 PRGTRALHAAAYAGELSVLRALLQSGAQPNAKDGYGCIPLMAACNGRRPATENCVTLVEVLLEAGALPSLADNEGRVALHTAAHWGADDAIEVLVAAAPSTLKYADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTGLEAVGGVEAARAAMKRAVKFNRTKILEKLLGIEGEEMRAWWANS 754
            P+G   + AA     +  L+ +L++GA PN  DG GC  L  AC         C+  V  LL+ GA P+L       ALHTAA  G  +    L+AAAP+TL   +                                                           GLEAVGG+++   AM  AV  +RT+ L  LL +EGEE R +WA +
Sbjct:   14 PKGLGLVSAAVIVRRIPALQCVLRAGADPNTPDGVGCNALQVACFDGDDERRLCI--VRELLKWGANPNLRGGPYGSALHTAAKEGHTNLFTTLLAAAPATLNLVNEQGLTPLGTATSFGRHKAVTCLLSLGASDRQVFQETRSGSLQEAVVAGHDTLLSLLLGKGLEAVGGLDSIPDAMGCAVTKSRTRTLNLLLSVEGEERRTFWART 221          
BLAST of mRNA_L-elsbetiae_contig7786.16733.1 vs. uniprot
Match: UPI000F6860E2 (transient receptor potential channel pyrexia-like isoform X2 n=2 Tax=Penaeus TaxID=133894 RepID=UPI000F6860E2)

HSP 1 Score: 65.9 bits (159), Expect = 1.010e-7
Identity = 51/150 (34.00%), Postives = 73/150 (48.67%), Query Frame = 2
Query:    2 PLLRAAIY*YLDIVNLLLEEGANLEIATPRNPLLAEKGLIFPRGTRALHAAAYAGELSVLRALLQSGAQPNAKDGYGCIPLMAACNGRRPAT--ENCVTLVEVLLEAGALPSLADNEGRVALHTAAHWGADDAIEVLVAA-APSTLKYAD 442
            PL+ A  + + + V  L+  GAN+ +A                G   LH A+  G +S LR L+  GA P+  D +   PL  A     P     N V++VE+LL AGAL    D +GR+ALH AA  G+   I++LV     ST+ + D
Sbjct:   69 PLIYAVKHDFTEAVLELVAAGANVNLADAA-------------GITPLHMASGGGHISTLRILIARGAPPDPLDNHARTPLHYAARAANPGPGGSNFVSVVEMLLSAGALLGRRDADGRLALHNAATAGSSKLIKILVRGRGSSTINFKD 205          
BLAST of mRNA_L-elsbetiae_contig7786.16733.1 vs. uniprot
Match: A0A3R7LSC8_PENVA (Ion_trans domain-containing protein n=4 Tax=Penaeus TaxID=133894 RepID=A0A3R7LSC8_PENVA)

HSP 1 Score: 65.9 bits (159), Expect = 1.120e-7
Identity = 51/150 (34.00%), Postives = 73/150 (48.67%), Query Frame = 2
Query:    2 PLLRAAIY*YLDIVNLLLEEGANLEIATPRNPLLAEKGLIFPRGTRALHAAAYAGELSVLRALLQSGAQPNAKDGYGCIPLMAACNGRRPAT--ENCVTLVEVLLEAGALPSLADNEGRVALHTAAHWGADDAIEVLVAA-APSTLKYAD 442
            PL+ A  + + + V  L+  GAN+ +A                G   LH A+  G +S LR L+  GA P+  D +   PL  A     P     N V++VE+LL AGAL    D +GR+ALH AA  G+   I++LV     ST+ + D
Sbjct:   69 PLIYAVKHDFTEAVLELVAAGANVNLADAA-------------GITPLHMASGGGHISTLRILIARGAPPDPLDNHARTPLHYAARAANPGPGGSNFVSVVEMLLSAGALLGRRDADGRLALHNAATAGSSKLIKILVRGRGSSTINFKD 205          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7786.16733.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D8LDZ2_ECTSI1.900e-4033.25Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si... [more]
D8LSK4_ECTSI1.430e-2932.25Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JK53_9PHAE3.070e-2930.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G4M4_ECTSI2.900e-2730.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L2Q3_9PHAE1.880e-2131.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LSK8_ECTSI1.200e-1827.45Ankyrin n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D8LME7_ECTSI5.560e-1229.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
UPI000F6860E21.010e-734.00transient receptor potential channel pyrexia-like ... [more]
A0A3R7LSC8_PENVA1.120e-734.00Ion_trans domain-containing protein n=4 Tax=Penaeu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7786contigL-elsbetiae_contig7786:2867..4840 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score123.6
Seed ortholog evalue1.5e-25
Seed eggNOG ortholog2880.D8LDZ2
KEGG koko:K10380
KEGG Pathwayko04624,ko05205,map04624,map05205
Hectar predicted targeting categoryother localisation
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04812
Ec32 ortholog descriptionAnkyrin repeat-containing domain
Ec32 orthologEc-23_003220.1
Exons2
Model size1411
Cds size903
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7786.16733.1prot_L-elsbetiae_contig7786.16733.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig7786 3131..4596 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816862.7330055-UTR-L-elsbetiae_contig7786:2866..31301622816862.7330055-UTR-L-elsbetiae_contig7786:2866..3130Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7786 2867..3130 -
1691683869.744525-UTR-L-elsbetiae_contig7786:2866..31301691683869.744525-UTR-L-elsbetiae_contig7786:2866..3130Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7786 2867..3130 -
1622816862.7670226-UTR-L-elsbetiae_contig7786:4596..48401622816862.7670226-UTR-L-elsbetiae_contig7786:4596..4840Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7786 4597..4840 -
1691683869.7739823-UTR-L-elsbetiae_contig7786:4596..48401691683869.7739823-UTR-L-elsbetiae_contig7786:4596..4840Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7786 4597..4840 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816862.7458553-CDS-L-elsbetiae_contig7786:3130..31611622816862.7458553-CDS-L-elsbetiae_contig7786:3130..3161Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7786 3131..3161 -
1691683869.755971-CDS-L-elsbetiae_contig7786:3130..31611691683869.755971-CDS-L-elsbetiae_contig7786:3130..3161Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7786 3131..3161 -
1622816862.756098-CDS-L-elsbetiae_contig7786:3724..45961622816862.756098-CDS-L-elsbetiae_contig7786:3724..4596Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7786 3725..4596 -
1691683869.7649724-CDS-L-elsbetiae_contig7786:3724..45961691683869.7649724-CDS-L-elsbetiae_contig7786:3724..4596Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7786 3725..4596 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig7786.16733.1

>prot_L-elsbetiae_contig7786.16733.1 ID=prot_L-elsbetiae_contig7786.16733.1|Name=mRNA_L-elsbetiae_contig7786.16733.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=301bp
MAACNGRRPATENCVTLVEVLLEAGALPSLADNEGRVALHTAAHWGADDA
IEVLVAAAPSTLKYADHDGLTPLSVATAENNESTMRLLLSVGASDKETWM
KHGECSLGLAAEMGHEGVMNLLLDTGLEAVGGVEAARAAMKRAVKFNRTK
ILEKLLGIEGEEMRAWWANSDSPEGLPVLLATAAGCCLAATSVLLAAGAD
ELVFENNGLLASGVIGAVLDEGEKDEAKVAAFCRMLERGPAFRARSYCWP
VQTSTALVSISSGGVAKRNAPLDLRIFRPSNHAFFTTRFVRYTRKCVGKK
*
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mRNA from alignment at L-elsbetiae_contig7786:2867..4840-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig7786.16733.1 ID=mRNA_L-elsbetiae_contig7786.16733.1|Name=mRNA_L-elsbetiae_contig7786.16733.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1974bp|location=Sequence derived from alignment at L-elsbetiae_contig7786:2867..4840- (Laminarionema elsbetiae ELsaHSoW15)
GCCCTTGCTACGGGCTGCGATATATTGATATCTAGATATCGTCAATCTTC TCTTGGAGGAGGGCGCCAACCTAGAAATCGCTACTCCACGCAATCCGCTG CTTGCTGAGAAAGGTTTGATATTCCCGCGTGGAACCCGCGCACTCCATGC CGCCGCGTACGCTGGAGAGCTCAGTGTCCTCCGCGCTCTACTCCAGTCTG GTGCCCAGCCGAACGCGAAAGATGGCTACGGATGCATTCCTTTGATGGCA GCCTGCAACGGGCGTCGACCAGCAACGGAGAACTGTGTGACACTAGTCGA GGTGCTGCTCGAGGCAGGCGCCCTTCCTTCATTGGCGGACAACGAAGGTC GCGTCGCTCTTCATACTGCCGCCCACTGGGGTGCCGACGACGCCATCGAG GTACTAGTGGCTGCGGCACCGAGTACCCTTAAATACGCGGACCATGACGG GCTAACACCGCTGTCCGTTGCTACTGCCGAGAACAATGAAAGTACCATGC GCTTGCTGCTGTCGGTTGGGGCGAGTGACAAGGAGACCTGGATGAAGCAC GGGGAGTGCTCGCTCGGGTTGGCGGCAGAAATGGGGCATGAGGGCGTGAT GAACCTGTTGCTCGACACGGGATTGGAAGCTGTTGGCGGGGTTGAGGCGG CTCGTGCGGCTATGAAGCGTGCCGTCAAGTTTAACCGCACCAAAATCCTA GAAAAACTACTTGGCATCGAGGGGGAAGAGATGCGAGCGTGGTGGGCAAA CTCGGACTCACCAGAGGGTTTACCTGTGCTCTTGGCCACCGCCGCGGGCT GCTGTCTTGCCGCGACCAGTGTTTTGCTCGCGGCCGGTGCTGATGAGCTA GTGTTCGAGAACAATGGGCTCCTTGCGAGCGGGGTCATCGGCGCCGTGCT TGACGAGGGCGAGAAGGACGAAGCCAAGGTAGCGGCCTTTTGTCGAATGC TGGAGCGGGGTCCAGCCTTCCGAGCCCGATCGTACTGCTGGCCAGTTCAA ACGAGTACTGCTTTGGTCTCGATTTCGTCTGGTGGCGTGGCAAAGCGAAA TGCCCCGTTGGATCTTCGTATTTTCCGGCCAAGCAATCATGCCTTCTTCA CAACCCGTTTTGTGAGGTGAGCGGGCAGGAAGGGGCGTTTTAGCCGTAGT CTTTTTCCCCAGGCAAATGCAGGTCGTAGGTCTGTGGCATTTTATGTTGT AGAGAGACGCTACACAAATGTTTTACCACACAACGCCGCAAGCATTCCGC TACGACAATCCTTCGATAATCCCAACCATGTTATCCTTACAACATGCACA TATGTTTCACGTCGCTTTCATGCCCTATACCTTTGAGAGCTGGGTGGAAG GTTTTGTGATTTTGCTTTGCTTATCGTTTTAGGATTGAAGCCCTCGGTGG GGTGCGCATGCTACGTGAACCGCTTGCCGGTAGTGCTTTGAGGTGTGGAT GTTGGGTGTTGAGAGAAGCTTGTTGTCTCGACACGCGCAGAATGCCACAA AAGAGGCTTCTTCGAGAGGAATAATGGCACTCCGAAGCAAACAGAGAGTC AAATACTGATGTGCGTGTATCGAGAGCGCCGCGGATATCAGCCATCACCA TTAACCACGACCAGCACCGCCGGTGACGACTTCACTGACGAGTTTTGGTA TCTTCCCTCCTTGCCTGTTTTCGTGTTAGGTACACGCGAAAGTGCGTGGG GAAGAAGTAAGAGGCTTGATTATAGGCGTCATCAGAATCGTGGCGAGAAA GAAGACGAAGCCACTCTTCCTCGTGTTCCGACCGCATAGTGCATGCTTGA CGGCACTTTGTTCGGTACAAGGCGCGTTCTTGCGTCAGCAGTACCCCCCC TATCGCACCAGACGTTGAAGGGTGTTCGACGGCAACCGCTGGCATGAATC TGAGGTTTCGTACCATATTATTTTCGCTTACTATAAGTGTGGGGGGGGGC ATGAGGTTTGTCCTATCGGGGTAG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig7786:2867..4840-

>mRNA_L-elsbetiae_contig7786.16733.1 ID=mRNA_L-elsbetiae_contig7786.16733.1|Name=mRNA_L-elsbetiae_contig7786.16733.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1806bp|location=Sequence derived from alignment at L-elsbetiae_contig7786:2867..4840- (Laminarionema elsbetiae ELsaHSoW15)
ATGGCAGCCTGCAACGGGCGTCGACCAGCAACGGAGAACTGTGTGACACT
AGTCGAGGTGCTGCTCGAGGCAGGCGCCCTTCCTTCATTGGCGGACAACG
AAGGTCGCGTCGCTCTTCATACTGCCGCCCACTGGGGTGCCGACGACGCC
ATCGAGGTACTAGTGGCTGCGGCACCGAGTACCCTTAAATACGCGGACCA
TGACGGGCTAACACCGCTGTCCGTTGCTACTGCCGAGAACAATGAAAGTA
CCATGCGCTTGCTGCTGTCGGTTGGGGCGAGTGACAAGGAGACCTGGATG
AAGCACGGGGAGTGCTCGCTCGGGTTGGCGGCAGAAATGGGGCATGAGGG
CGTGATGAACCTGTTGCTCGACACGGGATTGGAAGCTGTTGGCGGGGTTG
AGGCGGCTCGTGCGGCTATGAAGCGTGCCGTCAAGTTTAACCGCACCAAA
ATCCTAGAAAAACTACTTGGCATCGAGGGGGAAGAGATGCGAGCGTGGTG
GGCAAACTCGGACTCACCAGAGGGTTTACCTGTGCTCTTGGCCACCGCCG
CGGGCTGCTGTCTTGCCGCGACCAGTGTTTTGCTCGCGGCCGGTGCTGAT
GAGCTAGTGTTCGAGAACAATGGGCTCCTTGCGAGCGGGGTCATCGGCGC
CGTGCTTGACGAGGGCGAGAAGGACGAAGCCAAGGTAGCGGCCTTTTGTC
GAATGCTGGAGCGGGGTCCAGCCTTCCGAGCCCGATCGTACTGCTGGCCA
GTTCAAACGAGTACTGCTTTGGTCTCGATTTCGTCTGGTGGCGTGGCAAA
GCGAAATGCCCCGTTGGATCTTCGTATTTTCCGGCCAAGCAATCATGCCT
TCTTCACAACCCGTTTTGTGAGATGGCAGCCTGCAACGGGCGTCGACCAG
CAACGGAGAACTGTGTGACACTAGTCGAGGTGCTGCTCGAGGCAGGCGCC
CTTCCTTCATTGGCGGACAACGAAGGTCGCGTCGCTCTTCATACTGCCGC
CCACTGGGGTGCCGACGACGCCATCGAGGTACTAGTGGCTGCGGCACCGA
GTACCCTTAAATACGCGGACCATGACGGGCTAACACCGCTGTCCGTTGCT
ACTGCCGAGAACAATGAAAGTACCATGCGCTTGCTGCTGTCGGTTGGGGC
GAGTGACAAGGAGACCTGGATGAAGCACGGGGAGTGCTCGCTCGGGTTGG
CGGCAGAAATGGGGCATGAGGGCGTGATGAACCTGTTGCTCGACACGGGA
TTGGAAGCTGTTGGCGGGGTTGAGGCGGCTCGTGCGGCTATGAAGCGTGC
CGTCAAGTTTAACCGCACCAAAATCCTAGAAAAACTACTTGGCATCGAGG
GGGAAGAGATGCGAGCGTGGTGGGCAAACTCGGACTCACCAGAGGGTTTA
CCTGTGCTCTTGGCCACCGCCGCGGGCTGCTGTCTTGCCGCGACCAGTGT
TTTGCTCGCGGCCGGTGCTGATGAGCTAGTGTTCGAGAACAATGGGCTCC
TTGCGAGCGGGGTCATCGGCGCCGTGCTTGACGAGGGCGAGAAGGACGAA
GCCAAGGTAGCGGCCTTTTGTCGAATGCTGGAGCGGGGTCCAGCCTTCCG
AGCCCGATCGTACTGCTGGCCAGTTCAAACGAGTACTGCTTTGGTCTCGA
TTTCGTCTGGTGGCGTGGCAAAGCGAAATGCCCCGTTGGATCTTCGTATT
TTCCGGCCAAGCAATCATGCCTTCTTCACAACCCGTTTTGTGAGGTACAC
GCGAAAGTGCGTGGGGAAGAAGTAAGTACACGCGAAAGTGCGTGGGGAAG
AAGTAA
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