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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 281 |
| Cds size | 246 |
| Stop | 1 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622816861.990748-UTR-L-elsbetiae_contig7777:3903..3937 | 1622816861.990748-UTR-L-elsbetiae_contig7777:3903..3937 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig7777 3904..3937 - |
| 1691683869.2270517-UTR-L-elsbetiae_contig7777:3903..3937 | 1691683869.2270517-UTR-L-elsbetiae_contig7777:3903..3937 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig7777 3904..3937 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622816862.0021603-CDS-L-elsbetiae_contig7777:3937..4022 | 1622816862.0021603-CDS-L-elsbetiae_contig7777:3937..4022 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig7777 3938..4022 - |
| 1691683869.2378037-CDS-L-elsbetiae_contig7777:3937..4022 | 1691683869.2378037-CDS-L-elsbetiae_contig7777:3937..4022 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig7777 3938..4022 - |
| 1622816862.0156734-CDS-L-elsbetiae_contig7777:7222..7383 | 1622816862.0156734-CDS-L-elsbetiae_contig7777:7222..7383 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig7777 7223..7383 - |
| 1691683869.2471032-CDS-L-elsbetiae_contig7777:7222..7383 | 1691683869.2471032-CDS-L-elsbetiae_contig7777:7222..7383 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig7777 7223..7383 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7777.16723.1 >prot_L-elsbetiae_contig7777.16723.1 ID=prot_L-elsbetiae_contig7777.16723.1|Name=mRNA_L-elsbetiae_contig7777.16723.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=82bp
SDDDFAAPTARPGHPAGATALGGGVDTTTRGGGGSDGGAETSKSCLALPL
SLQSLVCSPLLSSFPIPQGPPPCCCPGVTGA* back to topmRNA from alignment at L-elsbetiae_contig7777:3904..7383- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig7777.16723.1 ID=mRNA_L-elsbetiae_contig7777.16723.1|Name=mRNA_L-elsbetiae_contig7777.16723.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3480bp|location=Sequence derived from alignment at L-elsbetiae_contig7777:3904..7383- (Laminarionema elsbetiae ELsaHSoW15)
TCGGATGATGATTTTGCCGCTCCCACCGCCAGGCCTGGTCATCCCGCTGG
AGCCACCGCTCTCGGCGGCGGGGTTGATACTACTACCCGCGGCGGCGGCG
GCAGCGACGGGGGCGCCGAGACTTCTAAGAGCTGTCTCGCCCTGCCGTTG
TCGCTTCAATCGCTCAAGACAAATATAAAAAAAAAAAAAAAAAAAAAACG
CGACGACAAAACAAACAGTAGAGAAATAATTAGAGTNNNNNNNNAGGGGA
CGGGGGCGCCGAAACTTCAAAGCTCTGTCTCGCCCTGCCTTTGTTGATTA
AATCAACCAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGCGACGA
CAAAACAAACAGTAGAGAAATAATTAGAGTAATATTTAGATTCTGTGCAT
GTGTGTATATGTGTGTATGTATGTAGTGGGTGCTTGGGGTGGTAAGTCGG
CGACATGCACGGTTTTTGAGAGGCTCATATGGTATGTATGGATGGTCGTA
CTTTGGAAGTGTATGTAACCGTCGTTTCGTATGGTGCGTGATGAGCGTGG
CGAGCGTACCCTTGCATAAATAGTAGCTCGGATATACTCTTAAGTAGCAT
GGCAACTAGGTCGAATCCTCTTGTATGGCAGGTCGGAGACAAGGTGATGT
TGAACACGACGCACCCAAAATATAAAGTGTGTTTTTTTTTATTAATTAGT
TAATTATTGGTTTTGGGCAGGCAGTATGGAGGGTATGGTAACTAGTTCGA
AGGATGGCCGACGCTTTTCTCCGCTTGCACGGAAAAAACGGCATGTAAAT
TGCCAGCAACTACATTTGAACTCCAGTCAGGCAAACGAAAGAGCTCATAG
TTATCCCCTACACCACGCGCACTTCGTTGCAGAGTAGCGTGAAGAACTCT
CTTCTAATACCAAAAAAAGACAGAAATCTCTGCATCCAGGCCCCATATAG
CAGTGCAGCCCGGCGGGTGCGTACTGGCATTTTCTGTAGCCTGCGCCGAG
GAACAGTTCGATCTGGGTTCCTCTCACTTGCCAACCATGGTTTCCAGCAG
TTGCACGCAGAGCCAAATTTAATGAATCTATACAAATCCGAGTCAAAAAG
CATTTTCCGACTTTTAGGAGACGATATCAAGGTGGCGGCGGACGCCGCGC
AAGACAACCAACCCGGAAGCCGCACAGAGGGCCAAGAGTCGTGACTCTTG
CAGAACAGCGGATAAAAGCATAACAAACGGCGTATGTGCGCTAAAGACAT
ATGAATCGATGCGCAACAGAACGACGCCACATAAATAAAACAGATGCGAA
ATGCGCATGCATGCACGGCCTGGCCTCACTTATCAATTGCTTCTTGTACA
TACCTAAATCCCTGTGCGATCGAACCATCAAAGAGAGTGTTTGTACTTCC
CCCCAAGTTTCGGTGAAGACACACGAAACAAAACAATCGACGCCCGAAAA
CAAGTATTTACCACTGCGGTTACTACCGTAGGTGACACAATATGCCCCCC
CCCCCCCCCCCCCGGCCCCAATTTTTGAGCCCCATTACCCCCTAACCCAA
ACGGGCCCCCCCCCCAACCACCAATTTTTTNNNNNNNNNNCACCCTCCGC
AACAAAAGGTTATACCCGCCGGGTAATATCACGGGGTACACCACTCTCCC
CCCCCCCCCCCCCCTGGACCCAATTTTAGAGCTCCATTACTCCGTAACGA
AGACGGCGCCAGCACCAAACGACATATTTTTGAACAGCCCTCGACTAGAT
CTTTCCAACGCCACCCCTTCCGGCACTGACGTCCTCTTCGTTACGGAGTA
ATGGAGCTCTAAAATCCGGTCCGGGGGGTGTCGTATCTTGTGTCACCTAC
GGTACGCAGCTATCGAAATGGTACGCTGGTAAACATGTGGGGTACCCAAA
GAAAAAAAGAAAAAAGAGAGAAAATAAGTAAACTCCGGATGATGTAATTG
TCTGCAGAGTGTTTGTTTACCCACCCTCCTGTGTGACCCCCGGCTGATGC
CTTTCGTTGGACAGGGAACGCGGCACCAAAACGTGCGGGTAACTGTCTGC
AGAGTGTATACGCCGTCCTCTGTGAACCCCGGCTGGTGCCTTTCGTTGGA
CAGGGAACACGGCACCGGAACGTGTAGTACCGTATATGGTACCACACAAG
ACAACACACCCCCTGAACCGATTTTCAAAGCTCGGTTACTCTGTAACCGG
CACGATTCTAACACCAAACGACACGTTTTCGGGCAGCTCTTCATGAGATC
TTTCCAACGCCACCCTTTTCGGGACTGGCACTCTTCTCGCTGTGGGGTAC
TTGAGCTTTGAAAATCAGTCCAGGGGGTGTGTTATCTTGTGTCATCTACG
GTACGTCGAAGTACGTCACACCGAAGCGCGTGACACACTAGGCAGGCAGA
CACACGAAGGTGACACAAGATACCCCACCCCCTGGATCGAATTTCAGAGC
CCCGTCAGCAGTCTATACCCTTTCTAGGGTACATAGCTTATCCTATGACC
ACGGGAATCGACCGCGCCAGTGTTAGGTTGGTACGGACTCATGGAGGTGT
CCTGGACAGAGAGTTCGGAACGGTTTGTAATGTGAAGACAGCACAACACA
CATTACTGCGCAACGAAGAGGGTGCAAGCAACACCAAGCGACACGTTTTC
GGACAGCCCCCGACTAGATCTTTGCTCCCTCTGACCGGCAATATAAGGCC
GGTTCGGGCACTTGTCAGAATAAATCGAGCTGGCGGTGAATGTTTGAGCT
GGGAGTTCGATCCTCACCTCAAACACTTTTTTCTTCGGAAGAGTACTTTC
TTCGAAAAAAGCTTTTTTCTCTTCGAAAGAAAAAATCTATTTTTTTCTTC
GAAAAAACAAAAAAACACTCAACACTTTTTTTTCCAAATATATGTACCAA
CGTCGCCCCCTTCCGGCACTTCTGTCACTCTTCTTGTCGGGGAGGCATCG
ATCGAGCTTTGAAAAGCTGTCCAGGGGGTGTTGTTCTTTCTTCACATTAA
AAACCGTTCCGATCTCTGCACTCAGTACCTCCCTATGGGCATACCGTAGG
TGACACAAGATATCACACCCCCTGGACCGAACTTTAGAGCTCCATAACTC
CGTAACGAAGAAGGTGCCAGCACCAAGCAACACATGATCGGATAGCCCTC
GACTAGATATTTCCAATGCCACCGCTTTCGGCACTGGCACTCTTCTTGCT
GAGGAGGAATCGAGCTTTGAAATTATGTCCAGGGGGTGTGGTATCTTGTG
TTACCTACGGTAATATTCCCAACACATGGTGCGGTCAGTTCCCGTGGTCA
CAGGCTAACTTATACCCCAAAAAAGGTATACGGCATCTTGTGTCACATGC
GGCAGCCCCAGGCTTGTTTGCTCACCTCTGCTAAGCTCCTTCCCGATCCC
CCAGGGGCCGCCGCCCTGCTGCTGCCCGGGGGTAACGGGGGCATAAACGC
CGGGATATGGGGCGGTCGTACACCTTGCCC back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig7777:3904..7383- >mRNA_L-elsbetiae_contig7777.16723.1 ID=mRNA_L-elsbetiae_contig7777.16723.1|Name=mRNA_L-elsbetiae_contig7777.16723.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=492bp|location=Sequence derived from alignment at L-elsbetiae_contig7777:3904..7383- (Laminarionema elsbetiae ELsaHSoW15)
TCGGATGATGATTTTGCCGCTCCCACCGCCAGGCCTGGTCATCCCGCTGG
AGCCACCGCTCTCGGCGGCGGGGTTGATACTACTACCCGCGGCGGCGGCG
GCAGCGACGGGGGCGCCGAGACTTCTAAGAGCTGTCTCGCCCTGCCGTTG
TCGCTTCAATCTCGGATGATGATTTTGCCGCTCCCACCGCCAGGCCTGGT
CATCCCGCTGGAGCCACCGCTCTCGGCGGCGGGGTTGATACTACTACCCG
CGGCGGCGGCGGCAGCGACGGGGGCGCCGAGACTTCTAAGAGCTGTCTCG
CCCTGCCGTTGTCGCTTCAATCGCTTGTTTGCTCACCTCTGCTAAGCTCC
TTCCCGATCCCCCAGGGGCCGCCGCCCTGCTGCTGCCCGGGGGTAACGGG
GGCATAAGCTTGTTTGCTCACCTCTGCTAAGCTCCTTCCCGATCCCCCAG
GGGCCGCCGCCCTGCTGCTGCCCGGGGGTAACGGGGGCATAA back to top
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