mRNA_L-elsbetiae_contig7762.16705.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7762.16705.1 vs. uniprot
Match: D7G725_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G725_ECTSI) HSP 1 Score: 169 bits (428), Expect = 8.020e-52 Identity = 79/88 (89.77%), Postives = 81/88 (92.05%), Query Frame = 1 Query: 1 ECAASGDLAGAVEALAHGGDPRWTNPDDQHRTALHCAAATGDLGCCEFLIQNGADVLSLDERQCSPLDIAVLGNQVPAVEYFSDKMDR 264 ECAA GDLAGAVEALAHGGDPRWTNPDDQHRTALH AAATG+LGCC+FLIQNGADV SLDERQCSPLDI LGNQVPAVEYF DKM R Sbjct: 8 ECAALGDLAGAVEALAHGGDPRWTNPDDQHRTALHFAAATGELGCCDFLIQNGADVFSLDERQCSPLDIPCLGNQVPAVEYFLDKMGR 95
BLAST of mRNA_L-elsbetiae_contig7762.16705.1 vs. uniprot
Match: D8LRY2_ECTSI (ArfGAP n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRY2_ECTSI) HSP 1 Score: 183 bits (464), Expect = 5.600e-51 Identity = 85/88 (96.59%), Postives = 86/88 (97.73%), Query Frame = 1 Query: 1 ECAASGDLAGAVEALAHGGDPRWTNPDDQHRTALHCAAATGDLGCCEFLIQNGADVLSLDERQCSPLDIAVLGNQVPAVEYFSDKMDR 264 ECAA GDLAGAVEALAHGGDPRWTNP+DQHRTALHCAAATGDLGCCEFLIQNGADVLSLDERQCSPLDIA LGNQVPAVEYFSDKMDR Sbjct: 674 ECAALGDLAGAVEALAHGGDPRWTNPEDQHRTALHCAAATGDLGCCEFLIQNGADVLSLDERQCSPLDIACLGNQVPAVEYFSDKMDR 761
BLAST of mRNA_L-elsbetiae_contig7762.16705.1 vs. uniprot
Match: D7FZP4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZP4_ECTSI) HSP 1 Score: 112 bits (279), Expect = 1.820e-29 Identity = 52/59 (88.14%), Postives = 54/59 (91.53%), Query Frame = 1 Query: 88 HRTALHCAAATGDLGCCEFLIQNGADVLSLDERQCSPLDIAVLGNQVPAVEYFSDKMDR 264 HRTALHCAAATGDLGCCE +IQN ADV SLD RQCSPLDIA LGNQVPAVE+FSDKMDR Sbjct: 15 HRTALHCAAATGDLGCCESIIQNIADVFSLDGRQCSPLDIACLGNQVPAVEHFSDKMDR 73
BLAST of mRNA_L-elsbetiae_contig7762.16705.1 vs. uniprot
Match: A0A7R9UG56_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UG56_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 1.060e-12 Identity = 33/85 (38.82%), Postives = 51/85 (60.00%), Query Frame = 1 Query: 7 AASGDLAGAVEALAHGGDPRWTNPDDQHRTALHCAAATGDLGCCEFLIQNGADVLSLDERQCSPLDIAVLGNQVPAVEYFSDKMD 261 A+ +L G ++AL HG + W NPDD+ R + AA G + EFL+ NGAD+ +LD +C+ +D+A + V VE+ KM+ Sbjct: 852 ASKDNLQGCLDALIHGAEIDWKNPDDRSRCPMAAAAEKGYVDVIEFLLLNGADINNLDHEECTVMDVAAMAGNVEVVEFLHAKME 936
BLAST of mRNA_L-elsbetiae_contig7762.16705.1 vs. uniprot
Match: A0A6C0IGH0_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0IGH0_9ZZZZ) HSP 1 Score: 65.5 bits (158), Expect = 2.900e-10 Identity = 35/84 (41.67%), Postives = 49/84 (58.33%), Query Frame = 1 Query: 7 AASGDLAGAVEALAHGG-DPRWTNPDDQHRTALHCAAATGDLGCCEFLIQNGADVLSLDERQCSPLDIAVLGNQVPAVEYFSDK 255 A+ G+LA E ++ GG D W NP+ Q TAL+ A+ G L E L+ NGAD+ SL+ + +PL IAVL + P V+ K Sbjct: 11 ASQGNLAKIKELISSGGVDINWENPNSQEETALYAASYLGKLDIVEALLDNGADINSLNAKLMTPLMIAVLNHNTPVVKLLLQK 94
BLAST of mRNA_L-elsbetiae_contig7762.16705.1 vs. uniprot
Match: A0A1Z5J8G7_FISSO (Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J8G7_FISSO) HSP 1 Score: 60.5 bits (145), Expect = 1.240e-7 Identity = 37/89 (41.57%), Postives = 46/89 (51.69%), Query Frame = 1 Query: 19 DLAGAVEALAHGGDPRWTNPDDQHRTALHCAAAT----GD-----LGCCEFLIQNGADVLSLDERQCSPLDIAVL-GNQVPAVEYFSDK 255 DL A ALA GG P WTNPD+ RTALH A GD + EFL+QNG + + D LD A+L G + VE+ + K Sbjct: 756 DLVAAAGALARGGSPDWTNPDEGGRTALHACALVPVPEGDEEWHAIEMAEFLLQNGGKLDAHDSSAHGVLDCALLNGASIEMVEFLTTK 844
BLAST of mRNA_L-elsbetiae_contig7762.16705.1 vs. uniprot
Match: A0A7N4P709_SARHA (Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein n=1 Tax=Sarcophilus harrisii TaxID=9305 RepID=A0A7N4P709_SARHA) HSP 1 Score: 60.1 bits (144), Expect = 1.650e-7 Identity = 33/68 (48.53%), Postives = 38/68 (55.88%), Query Frame = 1 Query: 22 LAGAVEALAHGGDPRWTNPDDQHRTALHCAAATGDLGCCEFLIQNGADVLSLDERQCSPLDIA-VLGN 222 L EALAHG D W NPD+ T L A G L CEFL+QNGA+V D + PL A VLG+ Sbjct: 580 LPDMAEALAHGADVNWANPDENRSTPLIQAVLGGSLVTCEFLLQNGANVNQKDAKGQGPLHHATVLGH 647
BLAST of mRNA_L-elsbetiae_contig7762.16705.1 vs. uniprot
Match: A0A7N4NFV3_SARHA (Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein n=1 Tax=Sarcophilus harrisii TaxID=9305 RepID=A0A7N4NFV3_SARHA) HSP 1 Score: 60.1 bits (144), Expect = 1.650e-7 Identity = 33/68 (48.53%), Postives = 38/68 (55.88%), Query Frame = 1 Query: 22 LAGAVEALAHGGDPRWTNPDDQHRTALHCAAATGDLGCCEFLIQNGADVLSLDERQCSPLDIA-VLGN 222 L EALAHG D W NPD+ T L A G L CEFL+QNGA+V D + PL A VLG+ Sbjct: 587 LPDMAEALAHGADVNWANPDENRSTPLIQAVLGGSLVTCEFLLQNGANVNQKDAKGQGPLHHATVLGH 654
BLAST of mRNA_L-elsbetiae_contig7762.16705.1 vs. uniprot
Match: G3VZY4_SARHA (Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein n=2 Tax=Sarcophilus harrisii TaxID=9305 RepID=G3VZY4_SARHA) HSP 1 Score: 60.1 bits (144), Expect = 1.660e-7 Identity = 33/68 (48.53%), Postives = 38/68 (55.88%), Query Frame = 1 Query: 22 LAGAVEALAHGGDPRWTNPDDQHRTALHCAAATGDLGCCEFLIQNGADVLSLDERQCSPLDIA-VLGN 222 L EALAHG D W NPD+ T L A G L CEFL+QNGA+V D + PL A VLG+ Sbjct: 618 LPDMAEALAHGADVNWANPDENRSTPLIQAVLGGSLVTCEFLLQNGANVNQKDAKGQGPLHHATVLGH 685
BLAST of mRNA_L-elsbetiae_contig7762.16705.1 vs. uniprot
Match: A0A7N4NHV0_SARHA (Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein n=9 Tax=Metatheria TaxID=9263 RepID=A0A7N4NHV0_SARHA) HSP 1 Score: 60.1 bits (144), Expect = 1.670e-7 Identity = 33/68 (48.53%), Postives = 38/68 (55.88%), Query Frame = 1 Query: 22 LAGAVEALAHGGDPRWTNPDDQHRTALHCAAATGDLGCCEFLIQNGADVLSLDERQCSPLDIA-VLGN 222 L EALAHG D W NPD+ T L A G L CEFL+QNGA+V D + PL A VLG+ Sbjct: 626 LPDMAEALAHGADVNWANPDENRSTPLIQAVLGGSLVTCEFLLQNGANVNQKDAKGQGPLHHATVLGH 693 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7762.16705.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7762.16705.1 >prot_L-elsbetiae_contig7762.16705.1 ID=prot_L-elsbetiae_contig7762.16705.1|Name=mRNA_L-elsbetiae_contig7762.16705.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=89bp ECAASGDLAGAVEALAHGGDPRWTNPDDQHRTALHCAAATGDLGCCEFLIback to top mRNA from alignment at L-elsbetiae_contig7762:5912..8850- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7762.16705.1 ID=mRNA_L-elsbetiae_contig7762.16705.1|Name=mRNA_L-elsbetiae_contig7762.16705.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2939bp|location=Sequence derived from alignment at L-elsbetiae_contig7762:5912..8850- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7762:5912..8850- >mRNA_L-elsbetiae_contig7762.16705.1 ID=mRNA_L-elsbetiae_contig7762.16705.1|Name=mRNA_L-elsbetiae_contig7762.16705.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=534bp|location=Sequence derived from alignment at L-elsbetiae_contig7762:5912..8850- (Laminarionema elsbetiae ELsaHSoW15)back to top |