mRNA_L-elsbetiae_contig7755.16700.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7755.16700.1 vs. uniprot
Match: A0A6H5JL33_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL33_9PHAE) HSP 1 Score: 120 bits (300), Expect = 2.640e-28 Identity = 78/161 (48.45%), Postives = 96/161 (59.63%), Query Frame = 1 Query: 223 RERANPLLTFLGPSGRTTVPLDXXXXXXXXXXXXXXXXEYGIEGCGGASGGVDSLELATQNQHVGIMASLTSAGVVDNGFALGTAVLCGSESSVKFLLLQWKQNSGDEGAAYL---ETRDRVGRTPMLCSIEA------CSPRITRLLVDAGADTTTAVRL 678 R +ANPLLT PSG T VPLD + I+GCGGASGGV +L LA +Q+V +M+ L AGV+D G AL TA E+ VK LLLQ + + G Y+ +T D VGRTP+LCSI+ CSPR+ RLLVDAGADT +AV L Sbjct: 171 RAKANPLLTKPTPSGVTFVPLDTAAEYGQTEVVRELIKQVSIKGCGGASGGVYALRLAALSQNVDVMSVLADAGVMDTGEALITAAGRNDEAGVK-LLLQQRHGTSAGGELYMYVNDTHDLVGRTPLLCSIDGGMAGFRCSPRVVRLLVDAGADTVSAVPL 330
BLAST of mRNA_L-elsbetiae_contig7755.16700.1 vs. uniprot
Match: A0A6H5KJA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE) HSP 1 Score: 118 bits (296), Expect = 1.240e-27 Identity = 71/149 (47.65%), Postives = 94/149 (63.09%), Query Frame = 1 Query: 229 RANPLLTFL-GPSGRTTVPLDXXXXXXXXXXXXXXXXEYGIEGCGGASGGVDSLELATQNQHVGIMASLTSAGVVDNGFALGTAVLCGSESSVKFLLLQWKQNSGDEGAAYLETRDRVGRTPMLCSIEACSPRITRLLVDAGADTTTAV 672 +A+PLLT + PSGRT +PLD + GI+GCGG+SGGV +L+ A Q +++ IM LT+AGVVD G AL A G E+ +KFLL Q + + AAY+ TRDR G TP+L I+ PR+ RLLV+AGADTT+ V Sbjct: 171 KADPLLTTVPDPSGRTFLPLDAAAENGHPEVVNELIRQVGIDGCGGSSGGVRALQQAAQFKNLNIMVILTNAGVVDTGLALVVAAGYGGETPLKFLLEQARARKTMDEAAYVNTRDRGGVTPLLWGIQHYRPRVVRLLVEAGADTTSPV 319
BLAST of mRNA_L-elsbetiae_contig7755.16700.1 vs. uniprot
Match: D7FVK3_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVK3_ECTSI) HSP 1 Score: 112 bits (280), Expect = 2.470e-25 Identity = 67/156 (42.95%), Postives = 90/156 (57.69%), Query Frame = 1 Query: 223 RERANPLLTFLGPSGRTTVPLDXXXXXXXXXXXXXXXXEYGIEGCGGASGGVDSLELATQNQHVGIMASLTSAGVVDNGFALGTAVLCGSESSVKFLLLQWKQNSGDEGAAYLETRDRVGRTPMLCSIE-----ACSPRITRLLVDAGADTTTAVR 675 R +ANPLLT + + + +PLD +GI GCGG +GGV +L+LA H+ +M +LT+AGVVD G AL A G VKFLL Q ++ A RD GRTP++C+I+ +CSP++ RLLVDAGADTT+ VR Sbjct: 168 RAKANPLLTRVNLAWQH-LPLDTAAQNGRLGVVLELLQRFGIRGCGGGTGGVTALQLAAMKPHMDVMLALTTAGVVDTGIALVKATSFGHMDVVKFLLQQQNGTPSEKSAYVSRPRDPCGRTPLICNIDVGLNQSCSPKVVRLLVDAGADTTSIVR 322
BLAST of mRNA_L-elsbetiae_contig7755.16700.1 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI) HSP 1 Score: 111 bits (278), Expect = 8.770e-25 Identity = 96/234 (41.03%), Postives = 112/234 (47.86%), Query Frame = 1 Query: 4 AATKLLLKAGADLEAAA-SDGSTPLQLAVGTGQSEIARVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRERANPLLTFLGPSGRTT-VPLDXXXXXXXXXXXXXXXXEYGIEGCGGASGGVDSLELATQNQHVGIMASLTSAGVVDNGFALGTAVLCGSESSVKFLLLQWKQNSGD--EGAAYLETRDRVGRTPMLCSIEAC---SPRITRLLVDAGADTTTAVRLLS 684 A KLL KAGADL+A +GS PL A XXXXX R ANPLL P G TT VPLD E GIEGC S G +L A NQH+ IMA LT AGVVD G AL A G E+SVKFLL + G EGA YL RD G TP++ + C +PRI R+LVDAGADTT+ V++++ Sbjct: 187 AIVKLLAKAGADLDAIIPGEGSAPLHRATHHEXXXXXXXXXXXXXNPDCQLPDGSTALHIAAEEGQVAVMRELLRGNANPLLIQTSPPGNTTTVPLDLAAKHGHTDVVRELIQELGIEGCDATSAGAHALAFAASNQHLDIMAILTEAGVVDTGKALYLAAGMGHEASVKFLLRHRHKEGGCGVEGA-YLNARDVNGYTPLVVCTQGCFSQAPRIVRMLVDAGADTTSPVQVMN 419
BLAST of mRNA_L-elsbetiae_contig7755.16700.1 vs. uniprot
Match: A0A6H5K037_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K037_9PHAE) HSP 1 Score: 109 bits (273), Expect = 1.780e-24 Identity = 74/154 (48.05%), Postives = 87/154 (56.49%), Query Frame = 1 Query: 226 ERANPLLTFL-GPSGRTTVPLDXXXXXXXXXXXXXXXXEYGIEGCGGASGGVDSLELATQNQHVGIMASLTSAGVVDNGFALGTAVLCGSESSVKFLLLQWKQNSGDEGAAYLE-TRDRVGRTPMLCSIEAC---SPRITRLLVDAGADTTTAV 672 ++AN LL + PSG T VPLD + G+ GCGG SGGV+SL LAT Q V IM LT GVVD G AL A E SVKFLL Q+ GA Y+ T D GRTP++C+IEAC SPRI R L+DA ADT + V Sbjct: 154 KKANTLLASVPAPSGATFVPLDVAVQHGHSEVVRELTHQLGVRGCGGVSGGVESLRLATTEQDVDIMGILTVGGVVDTGRALVVAAENSREESVKFLL----QHQAGGGAWYVNNTLDPFGRTPLVCTIEACGSSSPRIARFLIDAEADTKSTV 303
BLAST of mRNA_L-elsbetiae_contig7755.16700.1 vs. uniprot
Match: D7FY91_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY91_ECTSI) HSP 1 Score: 105 bits (263), Expect = 8.960e-23 Identity = 78/153 (50.98%), Postives = 91/153 (59.48%), Query Frame = 1 Query: 232 ANPLLTFLGPS--GRTTVPLDXXXXXXXXXXXXXXXXEYGIEGCGGASGGVDSLELATQNQHVGIMASLTSAGVVDNGFALGTAVLCGSESSVKFLLLQWKQNSGDEGAAYLETRDRVGRTPMLCSIEA--CSPRITRLLVDAGADTTTAVRL 678 A+PLL + PS G +PLD XXXXX GIE CGG S GVD+L LA +HVGI+A L AGVVD G AL A G E+SVKFLL Q + +AY+ +R G TP+L +I CS RI RLLVDAGADTT A RL Sbjct: 172 ADPLLGNVLPSTGGVCFLPLDVAXXXXXSAVVRELLQRLGIERCGGESRGVDALCLAVTGRHVGIVAMLAHAGVVDQGSALAAAAAQGYEASVKFLLRQHEGKHSASRSAYVNKLNRFGLTPLLENITCGHCSARIVRLLVDAGADTTAAYRL 324
BLAST of mRNA_L-elsbetiae_contig7755.16700.1 vs. uniprot
Match: D8LL76_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL76_ECTSI) HSP 1 Score: 105 bits (261), Expect = 9.850e-23 Identity = 69/150 (46.00%), Postives = 82/150 (54.67%), Query Frame = 1 Query: 238 PLLTFLGPSGRTTVPLDXXXXXXXXXXXXXXXXEYGIEGCGGASGGVDSLELATQNQHVGIMASLTSAGVVDNGFALGTAVLCGSESSVKFLLLQWKQNSGDEGAAYLET-RDRVGRTPMLCSIEA--CSPRITRLLVDAGADTTTAVRL 678 PLL SG T VPLD +GI GC GAS GVD+L A +QH+ +MA L AGVVD G AL V G E ++KFLL Q + G Y T RD G TP+L ++ CSPR+ RLLVDAGAD T AVR+ Sbjct: 170 PLLPTRMSSGNTFVPLDGAALNGHLAVARELVQRFGIRGCAGASAGVDALGQAAVDQHLDVMALLCDAGVVDTGNALVATVFLGRERALKFLLEQ--KGEGTARTTYASTPRDGRGHTPLLSAVTTGPCSPRVVRLLVDAGADATLAVRV 317
BLAST of mRNA_L-elsbetiae_contig7755.16700.1 vs. uniprot
Match: D7G1H7_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1H7_ECTSI) HSP 1 Score: 101 bits (251), Expect = 2.600e-21 Identity = 68/156 (43.59%), Postives = 86/156 (55.13%), Query Frame = 1 Query: 223 RERANPLLTFLGPSGRTTVPLDXXXXXXXXXXXXXXXXEYGIEGCGGASGGVDSLELATQNQHVGIMASLTSAG-VVDNGFALGTAVLCGSESSVKFLLLQWKQNSGDEGAAYLETRDRVGRTPMLCSIEA-----CSPRITRLLVDAGADTTTAV 672 R +ANPLL P G + VPL+ + GI GCGG SGGV++L A +H+ MA L AG VVD G AL A G +VKFLL ++ D A TRD GRTP++C+++ CSP+I RLLVDAGA+TT AV Sbjct: 166 RAKANPLLCSHTPMGVSYVPLEMAALHGNPDVAREMIRQVGIRGCGGPSGGVEALRQAADEEHLEFMAVLLDAGGVVDTGPALILAAENGRAVAVKFLL---RRRQADADAYVNGTRDPYGRTPVMCAVDVGAGRLCSPKIVRLLVDAGANTTRAV 318
BLAST of mRNA_L-elsbetiae_contig7755.16700.1 vs. uniprot
Match: D7FXF2_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXF2_ECTSI) HSP 1 Score: 96.7 bits (239), Expect = 6.190e-21 Identity = 83/231 (35.93%), Postives = 106/231 (45.89%), Query Frame = 1 Query: 16 LLLKAGADLEAAASDGSTPLQLAVGTGQSEIARVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRERANPLLTFLG--PSGRTTVPLDXXXXXXXXXXXXXXXXEYGIEGCGGASGGVDSLELATQNQHVGIMASLTSAGVVDNGFALGTAVLCGSESSVKFLLLQW--KQNSGDEGAAYLETRDRV-GRTPMLCSI---EACSPRITRLLVDAGADTTTAVRLLS 684 +L+ AGA+LE +TPLQLA+G G E+ R M ANPLLT P G V LD GIEGCGGA+ NQ + +MA L GVVDNG+AL A CG+E+SVKFLL Q K+++ AY+ + + G +P+ + E S RI R+LVDAGADTT+ VRL S Sbjct: 1 MLITAGANLEKR-YQSATPLQLAMGGGHLEVMRAMVKAGVNVDRRHHSGATALSAAASDGQLDIVEVLLGANANPLLTTPNSLPGGPPLVALDAAARGGHAVVVRRMIGHLGIEGCGGAT-----------NQRMDVMAILVDVGVVDNGYALVGAAACGAEASVKFLLQQHDKKKHASASSGAYVNSICHISGSSPLHYGMGFGEFYSARIVRMLVDAGADTTSRVRLRS 219
BLAST of mRNA_L-elsbetiae_contig7755.16700.1 vs. uniprot
Match: D8LJF9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF9_ECTSI) HSP 1 Score: 96.3 bits (238), Expect = 1.490e-19 Identity = 69/158 (43.67%), Postives = 85/158 (53.80%), Query Frame = 1 Query: 223 RERANPLLTFLGPSGRTTVPLDXXXXXXXXXXXXXXXXEYGIEGCGGASGGVDSLELATQNQHVGIMASLTSAGVVDNGFALGTAVLCGSESSVKFLLLQWKQNSGDEGAAYLETRDRVGRTPMLCSIEACS-------PRITRLLVDAGADTTTAVR 675 R ANPL+T P T +PLD GIEGCGG S G +L +A + + V MA LT AGVVD G AL + G E+SVK+LL ++ G AY+ RDR G TP+L SI C PR+ RLLV+AGADTTT +R Sbjct: 155 RANANPLIT-RAPLP-TLLPLDSAARNGNLLVMRELIQRVGIEGCGGQSRGEVALLMAGEGRRVAAMALLTHAGVVDTGQALTISAGLGREASVKYLLQNHAKHYGP--GAYVNVRDRNGTTPLLSSIYVCGVDEQSSFPRVARLLVEAGADTTTELR 308 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7755.16700.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7755.16700.1 >prot_L-elsbetiae_contig7755.16700.1 ID=prot_L-elsbetiae_contig7755.16700.1|Name=mRNA_L-elsbetiae_contig7755.16700.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=228bp MAATKLLLKAGADLEAAASDGSTPLQLAVGTGQSEIARVMIEAGANVNSRback to top mRNA from alignment at L-elsbetiae_contig7755:7189..7872- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7755.16700.1 ID=mRNA_L-elsbetiae_contig7755.16700.1|Name=mRNA_L-elsbetiae_contig7755.16700.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=684bp|location=Sequence derived from alignment at L-elsbetiae_contig7755:7189..7872- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7755:7189..7872- >mRNA_L-elsbetiae_contig7755.16700.1 ID=mRNA_L-elsbetiae_contig7755.16700.1|Name=mRNA_L-elsbetiae_contig7755.16700.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1368bp|location=Sequence derived from alignment at L-elsbetiae_contig7755:7189..7872- (Laminarionema elsbetiae ELsaHSoW15)back to top |