mRNA_L-elsbetiae_contig7754.16698.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig7754.16698.1
Unique NamemRNA_L-elsbetiae_contig7754.16698.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig7754.16698.1 vs. uniprot
Match: A0A6H5J605_9PHAE (Rhodanese domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J605_9PHAE)

HSP 1 Score: 346 bits (887), Expect = 1.390e-113
Identity = 201/312 (64.42%), Postives = 215/312 (68.91%), Query Frame = 1
Query:    1 EKQYTHTHKQAVLVGALKAENEALRARVTELEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGACRGSLGKAGMTAAEIARYSRHLLVPAVGVEGQRNLLGKTCLVIGAGGLASAVLPYLAGAGVGHIKIIDFDKIETSNLHRQVLFREAQAGKSKAETAAEAIGAINSSIRCTAIDAALTHDNALESLAGVDLVVDASDNPRTRYLVNDACVLAGKPLASFSFLGVSGSALGMEGQVSVFHHRXXXXXXXXXXXXXXXXXLGPCYRCVFPAPLAAEAGRRCSDNGVLGTVPG 936
            E +  +  +Q + V  LKAENEALRAR+  LEAA                                                  R SLGKAGMTAAEIARYSRHLLVPAVGVEGQRNLL KTCLVIGAGGLASAVLPYLAGAGVGHIKIIDFDKIETSNLHRQVL+RE QAG+SKA+ AA  +  INSSIRCTAI+ ALTHDNA+ +LAGVDLVVDASDNPRTRYLVNDACVL+G PL       VSGSALGMEGQVSVFHHR                  GPCYRCVFPAPLAAEAGRRCSDNGVLGT+PG
Sbjct:    9 EPEKLNPEQQLLAVANLKAENEALRARIAALEAAAGPLPDQPSGSTVQPNTTHVESSSSVGSTSCCSNNKNGVGNE------VSRESLGKAGMTAAEIARYSRHLLVPAVGVEGQRNLLDKTCLVIGAGGLASAVLPYLAGAGVGHIKIIDFDKIETSNLHRQVLYREGQAGQSKAKCAAATVRDINSSIRCTAIEEALTHDNAMGTLAGVDLVVDASDNPRTRYLVNDACVLSGTPL-------VSGSALGMEGQVSVFHHRG-----------------GPCYRCVFPAPLAAEAGRRCSDNGVLGTIPG 290          
BLAST of mRNA_L-elsbetiae_contig7754.16698.1 vs. uniprot
Match: W1NQ46_AMBTC (Adenylyltransferase and sulfurtransferase MOCS3 n=2 Tax=Magnoliopsida TaxID=3398 RepID=W1NQ46_AMBTC)

HSP 1 Score: 204 bits (519), Expect = 1.230e-58
Identity = 111/222 (50.00%), Postives = 146/222 (65.77%), Query Frame = 1
Query:  271 AGMTAAEIARYSRHLLVPAVGVEGQRNLLGKTCLVIGAGGLASAVLPYLAGAGVGHIKIIDFDKIETSNLHRQVLFREAQAGKSKAETAAEAIGAINSSIRCTAIDAALTHDNALESLAGVDLVVDASDNPRTRYLVNDACVLAGKPLASFSFLGVSGSALGMEGQVSVFHHRXXXXXXXXXXXXXXXXXLGPCYRCVFPAPLAAEAGRRCSDNGVLGTVPG 936
            A +T  +I RYSRHLL+P+ GV+GQ NLL  + LV+GAGGL S  L YLA  GVG I I+D D +E +NLHRQ++  EA  G+SK ++AAEA   INS+IR      AL   NAL+ ++  D+V+DA+DN  TRYL++D CV+ GKPL       VSG+ALG+EGQ++V+HH+                  GPCYRC+FP+P    A + CSD+GVLG VPG
Sbjct:   67 ASLTPQDIYRYSRHLLLPSFGVQGQLNLLKSSILVVGAGGLGSPALLYLAACGVGCIGIVDHDVVELNNLHRQIIHNEAYIGQSKVKSAAEACHGINSTIRIVEYPEALGSQNALDIVSKYDVVIDATDNVSTRYLISDCCVVLGKPL-------VSGAALGLEGQLTVYHHKG-----------------GPCYRCLFPSPPPQAACQNCSDSGVLGVVPG 264          
BLAST of mRNA_L-elsbetiae_contig7754.16698.1 vs. uniprot
Match: A0A078FVW3_BRANA (Adenylyltransferase and sulfurtransferase MOCS3 n=2 Tax=Brassica napus TaxID=3708 RepID=A0A078FVW3_BRANA)

HSP 1 Score: 201 bits (510), Expect = 2.450e-57
Identity = 113/224 (50.45%), Postives = 145/224 (64.73%), Query Frame = 1
Query:  274 GMTAAEIARYSRHLLVPAVGVEGQRNLLGKTCLVIGAGGLASAVLPYLAGAGVGHIKIIDFDKIETSNLHRQVLFREAQAGKSKAETAAEAIGAINSSIRCTAIDAALTHDNALESLAGVDLVVDASDNPRTRYLVNDACVLAGKPLASFSFLGVSGSALGMEGQVSVFHHRXXXXXXXXXXXXXXXXXLGPCYRCVFPAPLAAEAGRRCSDNGVLGTVPGERG 945
            GM+  +I RYSR LL+P+ GVEGQ NLL  + LVIGAGGL S  L YLA  GVG + IID D +E +N+HRQV+  EA  G  K ++AA A  +INS+I+      AL   NALE L+  D++VDA+DNP +RY+++D CVL GKPL       VSG+ALGMEGQ++V++H+                  GPCYRC+FP P    A +RCSD+GVLG VPG  G
Sbjct:   65 GMSPDQIYRYSRQLLLPSFGVEGQSNLLKSSVLVIGAGGLGSPALLYLAACGVGRLGIIDHDVVELNNMHRQVIHTEAFIGHPKVKSAATACRSINSTIKIDEYVEALRTSNALEILSQYDIIVDATDNPPSRYMISDCCVLLGKPL-------VSGAALGMEGQLTVYNHKG-----------------GPCYRCLFPTPPPTTACQRCSDSGVLGVVPGAIG 264          
BLAST of mRNA_L-elsbetiae_contig7754.16698.1 vs. uniprot
Match: E9HF27_DAPPU (Ubiquitin activating enzyme 4 (Fragment) n=1 Tax=Daphnia pulex TaxID=6669 RepID=E9HF27_DAPPU)

HSP 1 Score: 199 bits (505), Expect = 4.450e-57
Identity = 103/220 (46.82%), Postives = 142/220 (64.55%), Query Frame = 1
Query:  277 MTAAEIARYSRHLLVPAVGVEGQRNLLGKTCLVIGAGGLASAVLPYLAGAGVGHIKIIDFDKIETSNLHRQVLFREAQAGKSKAETAAEAIGAINSSIRCTAIDAALTHDNALESLAGVDLVVDASDNPRTRYLVNDACVLAGKPLASFSFLGVSGSALGMEGQVSVFHHRXXXXXXXXXXXXXXXXXLGPCYRCVFPAPLAAEAGRRCSDNGVLGTVPG 936
            +T  E++RYSR L++P VG EGQ  L   + L++GAGGL      YLA AGVGH+ ++D+D +E SNLHRQ++ REA  G SKA + A+A+ ++NS +R T  D  L   NA+E ++G D+V+D SDNP TRYL+NDACVL+G+PL       +SGSAL  EGQ++V+++R                  GPCYRC++P P   +    CSD GV+G VPG
Sbjct:    2 LTKEEVSRYSRQLILPQVGAEGQTQLRKSSVLILGAGGLGCPAAIYLAAAGVGHLGVVDYDVVELSNLHRQIMHREAGVGTSKAASLAQAVRSLNSLVRVTIHDVQLDGSNAMEMVSGYDVVLDCSDNPATRYLINDACVLSGRPL-------ISGSALRWEGQLTVYNYRG-----------------GPCYRCLYPTPPNPKFVTNCSDGGVIGAVPG 197          
BLAST of mRNA_L-elsbetiae_contig7754.16698.1 vs. uniprot
Match: UPI001EEB5E9B (adenylyltransferase and sulfurtransferase MOCS3-like isoform X2 n=1 Tax=Daphnia pulicaria TaxID=35523 RepID=UPI001EEB5E9B)

HSP 1 Score: 199 bits (506), Expect = 1.240e-56
Identity = 104/220 (47.27%), Postives = 142/220 (64.55%), Query Frame = 1
Query:  277 MTAAEIARYSRHLLVPAVGVEGQRNLLGKTCLVIGAGGLASAVLPYLAGAGVGHIKIIDFDKIETSNLHRQVLFREAQAGKSKAETAAEAIGAINSSIRCTAIDAALTHDNALESLAGVDLVVDASDNPRTRYLVNDACVLAGKPLASFSFLGVSGSALGMEGQVSVFHHRXXXXXXXXXXXXXXXXXLGPCYRCVFPAPLAAEAGRRCSDNGVLGTVPG 936
            +T  E++RYSR L++P VG EGQ  L   + L++GAGGL      YLA AGVGH+ ++D+D +E SNLHRQ++ REA  G SKA + A+AI ++NS +R T  D  L   NA+E ++G D+V+D SDNP TRYL+NDACVL+G+PL       +SGSAL  EGQ++V+++R                  GPCYRC++P P   +    CSD GV+G VPG
Sbjct:   58 LTKEEVSRYSRQLILPQVGAEGQTQLRKSSVLILGAGGLGCPAAIYLAAAGVGHLGVVDYDVVELSNLHRQIMHREAGVGTSKAASLAQAIRSLNSLVRVTTHDVQLDGSNAMEIVSGYDVVLDCSDNPATRYLINDACVLSGRPL-------ISGSALRWEGQLTVYNYRD-----------------GPCYRCLYPTPPNPKFVTNCSDGGVIGAVPG 253          
BLAST of mRNA_L-elsbetiae_contig7754.16698.1 vs. uniprot
Match: A0A1E7EU96_9STRA (Adenylyltransferase and sulfurtransferase MOCS3 homolog n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EU96_9STRA)

HSP 1 Score: 197 bits (501), Expect = 1.360e-56
Identity = 106/221 (47.96%), Postives = 142/221 (64.25%), Query Frame = 1
Query:  277 MTAAEIARYSRHLLVPA-VGVEGQRNLLGKTCLVIGAGGLASAVLPYLAGAGVGHIKIIDFDKIETSNLHRQVLFREAQAGKSKAETAAEAIGAINSSIRCTAIDAALTHDNALESLAGVDLVVDASDNPRTRYLVNDACVLAGKPLASFSFLGVSGSALGMEGQVSVFHHRXXXXXXXXXXXXXXXXXLGPCYRCVFPAPLAAEAGRRCSDNGVLGTVPG 936
            + A  I RYSR LL+    GVEGQ  LL  + LVIGAGG+ S V+ YLA  G+G + +IDFD ++ SNLHRQV+ +    G +KAE+A  A+  +N ++ C  I   LT +NALE ++  D +VDASDNP+TRY++NDACVL+GKPL       VSGSA+G+EGQ++V +++                  GPCYRC++P P   E  + CSDNGVLG VPG
Sbjct:   13 LKAEHIERYSRQLLIKGGFGVEGQLKLLNSSVLVIGAGGIGSTVILYLAACGIGSLSVIDFDDVDVSNLHRQVIHKTNDVGMNKAESARRAVENLNPTLSCKIIKEPLTVNNALELISSHDCIVDASDNPQTRYIINDACVLSGKPL-------VSGSAMGIEGQLTVCNYKG-----------------GPCYRCLYPKPNVKEGNKSCSDNGVLGPVPG 209          
BLAST of mRNA_L-elsbetiae_contig7754.16698.1 vs. uniprot
Match: A0A7R9ZQM9_9STRA (Adenylyltransferase and sulfurtransferase MOCS3 homolog n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZQM9_9STRA)

HSP 1 Score: 200 bits (508), Expect = 1.420e-56
Identity = 108/220 (49.09%), Postives = 142/220 (64.55%), Query Frame = 1
Query:  289 EIARYSRHLLVP-AVGVEGQRNLLGKTCLVIGAGGLASAVLPYLAGAGVGHIKIIDFDKIETSNLHRQVLFREAQAGKSKAETAAEAIGAINSSIRCTAIDAALTHDNALESLAGVDLVVDASDNPRTRYLVNDACVLAGKPLASFSFLGVSGSALGMEGQVSVFHHRXXXXXXXXXXXXXXXXXLGPCYRCVFPAPLAAEAGRRCSDNGVLGTVPGERG 945
            +I RYSR LL+    GVEGQ  L   + L++GAGG+ S V+ YLA  GVG + I+DFD ++ SNLHRQV+      G +KAE+A  A+  +N SIRC  + + LT+ NAL+ ++    VVDASDNP+TRYLVNDACVLAG PL       VSGSA+GMEGQ+++++H+                  GPCYRC++P P  +E  + CSDNGVLG VPG  G
Sbjct:  125 QIERYSRQLLMTHGFGVEGQLKLAKSSVLIVGAGGIGSTVILYLAACGVGRLSIVDFDHVDVSNLHRQVIHGTRNVGMNKAESACRAVKELNPSIRCEPVQSPLTYHNALQLVSDHTCVVDASDNPQTRYLVNDACVLAGVPL-------VSGSAIGMEGQLTIYNHKE-----------------GPCYRCLYPKPSKSEGTKTCSDNGVLGPVPGTIG 320          
BLAST of mRNA_L-elsbetiae_contig7754.16698.1 vs. uniprot
Match: A0A164L0V4_9CRUS (Adenylyltransferase and sulfurtransferase MOCS3 homolog n=3 Tax=Daphnia magna TaxID=35525 RepID=A0A164L0V4_9CRUS)

HSP 1 Score: 199 bits (505), Expect = 1.460e-56
Identity = 101/220 (45.91%), Postives = 142/220 (64.55%), Query Frame = 1
Query:  277 MTAAEIARYSRHLLVPAVGVEGQRNLLGKTCLVIGAGGLASAVLPYLAGAGVGHIKIIDFDKIETSNLHRQVLFREAQAGKSKAETAAEAIGAINSSIRCTAIDAALTHDNALESLAGVDLVVDASDNPRTRYLVNDACVLAGKPLASFSFLGVSGSALGMEGQVSVFHHRXXXXXXXXXXXXXXXXXLGPCYRCVFPAPLAAEAGRRCSDNGVLGTVPG 936
            +T  E++RYSR L++P VGVEGQ+ L   + L++GAGGL      YLA AG+GH+ ++D+D +E SNLHRQ++ REA  G SKA + A+A+ ++NS +R T  D  L   NA+  ++G D+ +D SDNP TRYL+NDACVL+G+PL       +SGSAL  EGQ++V+++R                  GPCYRC++P P   +    CSD GV+G VPG
Sbjct:   51 LTKDEVSRYSRQLILPQVGVEGQKQLANSSVLILGAGGLGCPAAIYLAAAGIGHLGVVDYDVVELSNLHRQIMHREASVGVSKAASLAQAVRSLNSRVRVTVHDVQLDGSNAMGIVSGYDVALDCSDNPATRYLINDACVLSGRPL-------ISGSALRWEGQLTVYNYRD-----------------GPCYRCLYPTPPNPQFVTNCSDGGVIGAVPG 246          
BLAST of mRNA_L-elsbetiae_contig7754.16698.1 vs. uniprot
Match: A0A7J0HFQ3_9ERIC (Co-factor for nitrate, reductase and xanthine dehydrogenase 5 n=1 Tax=Actinidia rufa TaxID=165716 RepID=A0A7J0HFQ3_9ERIC)

HSP 1 Score: 193 bits (491), Expect = 1.600e-56
Identity = 106/221 (47.96%), Postives = 145/221 (65.61%), Query Frame = 1
Query:  274 GMTAAEIARYSRHLLVPAVGVEGQRNLLGKTCLVIGAGGLASAVLPYLAGAGVGHIKIIDFDKIETSNLHRQVLFREAQAGKSKAETAAEAIGAINSSIRCTAIDAALTHDNALESLAGVDLVVDASDNPRTRYLVNDACVLAGKPLASFSFLGVSGSALGMEGQVSVFHHRXXXXXXXXXXXXXXXXXLGPCYRCVFPAPLAAEAGRRCSDNGVLGTVPG 936
            G++   I RYSRHLL+P++GV+GQ +LL  + +V+GAGGL S  L YLA  GVG I I+D D +E +NLHRQ++  E+  G+SK E+AA A  +INS+I+      AL   NALE L   D+V+DA+DN  +RYL++D CV+ GKPL       VSG+ALG+EGQ++V+++                   GPCYRC+FP+P    A +RCSD+GVLG VPG
Sbjct:   63 GLSPDMIYRYSRHLLLPSIGVQGQSSLLKTSIVVVGAGGLGSPALLYLAACGVGRIGIVDHDVVELNNLHRQIIHSESYIGRSKVESAAAACRSINSTIQIVEHKEALRTSNALEILRKYDIVIDATDNAPSRYLISDCCVVLGKPL-------VSGAALGLEGQLTVYNYDG-----------------GPCYRCLFPSPPPTTACQRCSDSGVLGVVPG 259          
BLAST of mRNA_L-elsbetiae_contig7754.16698.1 vs. uniprot
Match: A0A2G3C2Q5_CAPCH (Adenylyltransferase and sulfurtransferase MOCS3 (Fragment) n=1 Tax=Capsicum chinense TaxID=80379 RepID=A0A2G3C2Q5_CAPCH)

HSP 1 Score: 195 bits (496), Expect = 1.900e-56
Identity = 111/228 (48.68%), Postives = 147/228 (64.47%), Query Frame = 1
Query:  256 GSLGKA-GMTAAEIARYSRHLLVPAVGVEGQRNLLGKTCLVIGAGGLASAVLPYLAGAGVGHIKIIDFDKIETSNLHRQVLFREAQAGKSKAETAAEAIGAINSSIRCTAIDAALTHDNALESLAGVDLVVDASDNPRTRYLVNDACVLAGKPLASFSFLGVSGSALGMEGQVSVFHHRXXXXXXXXXXXXXXXXXLGPCYRCVFPAPLAAEAGRRCSDNGVLGTVPG 936
            G+LG + G++   I RYSRHLL+P+ GV+GQ NLL  + LVIGAGGL S  L YLA  GVG I I+D D +E +NL RQ++  EA  GKSK E+AA+A  +INSS +      A    NALE ++  D+VVDA+DN  +RY++ND CV+ GKPL       VSG+ALG+EGQ++V+++                   GPCYRC+FP P    A +RC+D+GVLG VPG
Sbjct:   52 GNLGNSNGLSPDMIYRYSRHLLLPSFGVQGQANLLKSSVLVIGAGGLGSPALLYLAACGVGRIGIVDHDIVELNNLQRQIIHTEAYIGKSKVESAADACRSINSSTQIVEHKEAFRTSNALEIVSKYDVVVDATDNAPSRYMINDCCVVLGKPL-------VSGAALGLEGQLTVYNYNG-----------------GPCYRCLFPTPPPTNACQRCADSGVLGVVPG 255          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7754.16698.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J605_9PHAE1.390e-11364.42Rhodanese domain-containing protein n=2 Tax=Ectoca... [more]
W1NQ46_AMBTC1.230e-5850.00Adenylyltransferase and sulfurtransferase MOCS3 n=... [more]
A0A078FVW3_BRANA2.450e-5750.45Adenylyltransferase and sulfurtransferase MOCS3 n=... [more]
E9HF27_DAPPU4.450e-5746.82Ubiquitin activating enzyme 4 (Fragment) n=1 Tax=D... [more]
UPI001EEB5E9B1.240e-5647.27adenylyltransferase and sulfurtransferase MOCS3-li... [more]
A0A1E7EU96_9STRA1.360e-5647.96Adenylyltransferase and sulfurtransferase MOCS3 ho... [more]
A0A7R9ZQM9_9STRA1.420e-5649.09Adenylyltransferase and sulfurtransferase MOCS3 ho... [more]
A0A164L0V4_9CRUS1.460e-5645.91Adenylyltransferase and sulfurtransferase MOCS3 ho... [more]
A0A7J0HFQ3_9ERIC1.600e-5647.96Co-factor for nitrate, reductase and xanthine dehy... [more]
A0A2G3C2Q5_CAPCH1.900e-5648.68Adenylyltransferase and sulfurtransferase MOCS3 (F... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7754contigL-elsbetiae_contig7754:5234..9319 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score335.1
Seed ortholog evalue3.5e-89
Seed eggNOG ortholog2880.D7FNE1
Preferred namecnxF
KEGG rclassRC00043
KEGG koko:K11996,ko:K18469
KEGG ReactionR07459,R07461
KEGG Pathwayko04122,map04122
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0001403,GO:0001558,GO:0002097,GO:0002098,GO:0002143,GO:0003674,GO:0003824,GO:0004792,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006396,GO:0006399,GO:0006400,GO:0006464,GO:0006725,GO:0006732,GO:0006753,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006979,GO:0007114,GO:0008033,GO:0008150,GO:0008152,GO:0008265,GO:0008641,GO:0009058,GO:0009108,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009144,GO:0009150,GO:0009199,GO:0009205,GO:0009259,GO:0009451,GO:0009987,GO:0010467,GO:0010570,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0016782,GO:0016783,GO:0016874,GO:0016877,GO:0018117,GO:0018130,GO:0018175,GO:0019008,GO:0019538,GO:0019637,GO:0019693,GO:0019720,GO:0019954,GO:0030447,GO:0032324,GO:0032446,GO:0032447,GO:0032505,GO:0032991,GO:0033554,GO:0034227,GO:0034470,GO:0034599,GO:0034641,GO:0034660,GO:0036211,GO:0036267,GO:0040007,GO:0040008,GO:0042221,GO:0042278,GO:0042292,GO:0043170,GO:0043412,GO:0043545,GO:0044182,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046039,GO:0046128,GO:0046483,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051186,GO:0051188,GO:0051189,GO:0051301,GO:0051716,GO:0055086,GO:0065007,GO:0070566,GO:0070647,GO:0070733,GO:0070783,GO:0070784,GO:0070887,GO:0071566,GO:0071704,GO:0072521,GO:0090304,GO:0090407,GO:1900428,GO:1901068,GO:1901135,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:2000220
EggNOG free text desc.thiosulfate sulfurtransferase activity
EggNOG OGsCOG0476@1,KOG2017@2759
EC2.7.7.80,2.8.1.11
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03016,ko04121,ko04131
Exons5
Model size945
Cds size945
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7754.16698.1prot_L-elsbetiae_contig7754.16698.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig7754 5234..9319 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816859.9308867-CDS-L-elsbetiae_contig7754:5233..55801622816859.9308867-CDS-L-elsbetiae_contig7754:5233..5580Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7754 5234..5580 +
1691683867.6817276-CDS-L-elsbetiae_contig7754:5233..55801691683867.6817276-CDS-L-elsbetiae_contig7754:5233..5580Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7754 5234..5580 +
1622816859.9419482-CDS-L-elsbetiae_contig7754:5962..60771622816859.9419482-CDS-L-elsbetiae_contig7754:5962..6077Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7754 5963..6077 +
1691683867.7014027-CDS-L-elsbetiae_contig7754:5962..60771691683867.7014027-CDS-L-elsbetiae_contig7754:5962..6077Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7754 5963..6077 +
1622816859.9519985-CDS-L-elsbetiae_contig7754:7152..72621622816859.9519985-CDS-L-elsbetiae_contig7754:7152..7262Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7754 7153..7262 +
1691683867.7147481-CDS-L-elsbetiae_contig7754:7152..72621691683867.7147481-CDS-L-elsbetiae_contig7754:7152..7262Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7754 7153..7262 +
1622816859.964795-CDS-L-elsbetiae_contig7754:8000..81631622816859.964795-CDS-L-elsbetiae_contig7754:8000..8163Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7754 8001..8163 +
1691683867.7281065-CDS-L-elsbetiae_contig7754:8000..81631691683867.7281065-CDS-L-elsbetiae_contig7754:8000..8163Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7754 8001..8163 +
1622816859.9764478-CDS-L-elsbetiae_contig7754:9109..93191622816859.9764478-CDS-L-elsbetiae_contig7754:9109..9319Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7754 9110..9319 +
1691683867.7394924-CDS-L-elsbetiae_contig7754:9109..93191691683867.7394924-CDS-L-elsbetiae_contig7754:9109..9319Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7754 9110..9319 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig7754.16698.1

>prot_L-elsbetiae_contig7754.16698.1 ID=prot_L-elsbetiae_contig7754.16698.1|Name=mRNA_L-elsbetiae_contig7754.16698.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=315bp
EKQYTHTHKQAVLVGALKAENEALRARVTELEAAAAAKEQAAGGLQAPTN
YHTDDSSGNNNNGGGGGSGDGGGGGGGGGSGGACRGSLGKAGMTAAEIAR
YSRHLLVPAVGVEGQRNLLGKTCLVIGAGGLASAVLPYLAGAGVGHIKII
DFDKIETSNLHRQVLFREAQAGKSKAETAAEAIGAINSSIRCTAIDAALT
HDNALESLAGVDLVVDASDNPRTRYLVNDACVLAGKPLASFSFLGVSGSA
LGMEGQVSVFHHRHGQGDGGGGGGGGGGGGLGPCYRCVFPAPLAAEAGRR
CSDNGVLGTVPGERG
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mRNA from alignment at L-elsbetiae_contig7754:5234..9319+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig7754.16698.1 ID=mRNA_L-elsbetiae_contig7754.16698.1|Name=mRNA_L-elsbetiae_contig7754.16698.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4086bp|location=Sequence derived from alignment at L-elsbetiae_contig7754:5234..9319+ (Laminarionema elsbetiae ELsaHSoW15)
GAGAAACAATATACACACACACACAAACAGGCGGTCCTGGTGGGCGCTCT CAAGGCCGAGAACGAGGCCCTGCGCGCGAGAGTAACGGAGCTCGAAGCGG CGGCGGCGGCGAAGGAACAGGCGGCCGGAGGCTTGCAAGCGCCCACCAAC TACCACACGGACGATAGCAGCGGCAACAACAACAACGGCGGCGGCGGCGG CAGCGGGGATGGTGGCGGCGGCGGGGGCGGCGGCGGCAGCGGCGGCGCTT GCAGGGGTTCTCTGGGAAAGGCGGGCATGACCGCCGCCGAGATCGCGAGG TACTCGCGACACCTGCTGGTGCCCGCGGTTGGCGTGGAGGGCCAAAGGTA GGGAAACATGTAACATGTGATTATTTTCACGCTACGGGCCCCTCCGGGGA GAGTTGAGAGAGGGCAGGGAAACCTGTAATATGTAACTACTTCATTCCTA ACCCCTACAGGGAAGAGGCGCGGTGCTGGTCAAGCGATGGGGCCCCTGGC GGCAACAACACCCTCGGCGGCCGACAAGAGCGACGATGACAGCCTAAATA TGCAAAAACCATAAAAATTCTCGTAAAAACTCACAAACGGCCCGGCATGC GAACCCACGAGAGAGAGATTTGGGGGGGGGAAGAGGGGTGAGTAACCGGC GCTGTTTGAGAATTTACAATCAAACGAGAGCAGGCCACAAAGCATTGGTG TTTGCCGTTTCTGTTTGCCGTTTTTGCAGGAACTTGCTCGGGAAGACGTG TTTGGTGATCGGGGCGGGAGGGCTCGCCTCGGCTGTGCTGCCTTACCTTG CCGGCGCCGGGGTCGGACACATCAAGATTATAGACTTCGACAAGGTGTGT TGTTGTGTGTTGTTGTTGTTGTTGCTGCTGTTAGCGGTGGTGGTGGTGTT TGCTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTCTTGCTGTTAGTGTTG CCGCTGTTGTTGTTAGTGCTGCTGTAGTTGTCGCTGTCGTTGCTGCTGGT GTCGTTCGTTGTTGGTGTTGTTTTTGGTGTTGTTGCTGCTGCAGCTGTCG CTATTGCTACTTTTCGCTTGGTTCTTGGCCGTCCAAATCGTCCTGAACTT GTATCATACTGATCGAATCGACACACCTCCGGACGCCATACGCGAACAGT AACAACAGCGGTGTGACGTAGGAGTATTTTCGCTGTACGGGCTAGGGATA TTTAGGGGTAGGGTAAACATTCATATATCCTGTCACCGTCGCCCCCTATT TCGCTGCTGTCTTTCCGAGAAGGGGGGGGGGGGGGGCGGGGGCGTGACAT ACGGCGGGCCCCCCTTCCCCCCCCTTCGCCGGACCCCCGTGGTTTGGGGA GGGAATAAACCCNNNNNNNNNNGGGTAACCATTCATTTTTCCTGCCCCCG TGCCCCCCTTTTTCGCTGCTGTCTTTCCGAGAAGGGGGGGGGGGGGGCAG GGGCGTGACATACGGCGGGCCTCCCTTCCCTCCCGTATGCCGGACACTCG TGTGTTAGGAACGGAATAAACCGACATGAGCTGTGTCTGATATTTTGTTC TTGTGCTTAGCGGACCCTTCGGATCCATTTTATTTCTTTTCATTCTTCAT TTTACCCTTTTTAGGGTAACAAGTTATCCTGCGACCACGGGAATCGACCG CGTTAGTGTTGGATTAGTACGAACTCATGGAGGTGTACTGGATAAAGAGA TCGGAACGGTTTCTAATGTGATGAAGACAACAACAACAACAACAACAACA ACAACAATAGAGAGGCACCCAAACAATGGTGGCGCCTGTCCGTCGTCATC CGAAGCCGAGGGGGGGGGTTGCGCACCGCCTCGAAAAGGACACAAATCGG GGCGAAAGAACTAAAGCTGCTGTGATAACTCCGACCCTGCGCGCAATCCC CGTTCCTTTTGTTCTTCAGATCGAAACGAGCAACCTTCACAGGCAGGTCC TGTTCAGGGAGGCACAGGCCGGGAAGAGCAAGGCCGAAACTGCCGCCGAG GCTATCGGGGCTATCAACTCCAGCATCAGGTAGGCTTTCTCTCTCTCTCT GTCTCTGTCTCGCTCGCTCGCTCTCTATATATCGCTCTCTCTCTATATAT ATATATCGCTCTCGCCCTCTCTCTCTTGCACGCAAAATAATTTACGCCGT TCGTTCGCTGCGCAGCATCTATCCTCCTGGGCCCGCGCTACGGACGTTGT CGTATCTATTCGCGCGTGCTATTTGTATGTATGGTTGCTCATGGTTGGAT ACTTTTTTCGTACTTTTTGTATTCGTCGTCGTCGACGCGCGACGCGCACC CTCCTCGCGCCGGCCTTTCCTTTCTGTCTGTGTTTTGTGTTTGGCTCTCA TTGCAAACCCTATAATACTATATCTATGTCTTCTATTTGTTTTGTTACAG ATTACGTTATGTAGATAATTTAGCCTTTGATCGCGGGGGGATCTACCGTG CCGTTGGGTGGGTGCGGACGGAAGAAGGTGCTGAGTAGATAGATAGATCG GGACGTTTTTGTGTTTTTTTTACGTGACAGCATCACCACCACCAGCAACA ACAACAACAACAACAAGAACAACAGCAGCAGCAACAACAGCAACAACAAC AACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAA CAACAACAACAACAACAACAACAACAGCAGCAGCAACAACAACAACAACA GCAACAGCACCAATAACACCAACAGCAACAACAACACCACCACCACTTAA CAACCACATCATCGCAGGTGCACGGCCATCGACGCGGCGCTGACCCACGA CAACGCCCTGGAATCCCTGGCGGGCGTCGACCTCGTCGTGGACGCCAGCG ACAACCCGCGCACCCGGTATCTCGTCAACGACGCCTGCGTTCTCGCAGGG AAGCCCTTGGCAAGTTTCTCCTTCCTTGGCGTGACGCATGGTCTCTGCAT GTTTCTACATAAACACGAAATGTATCTGCATGCATGCATGCCCTGGTGGC GAGAGAAGCCTGTCGAGCACTGGAAATAAATGCTTCCGCTGCTGCTACTG CTGCTGCTGCTGCTGCTGCCGCCGCCGCTGCTGCCGCTGCCAGGGGGTGC AAGAAGAAACAAAAATATGTATATATATTTTTATAAAAATGTTGCCCTTC TTTCCATCGACGCTGATTTTTTGCACGATGTCGGGGACAAACAAGGCCTC AAGAATTGAAAGAAACTGGCGTTTATTGTGTGTATCATGTGCCTCGCGAA CGGCGCCTCCTGCGTGCTCACGGGGGAAAAAGAAGGCCCATTTCTGGCCC GCTTCTTGCCGCGGGGAGCAAATAAAAGCTCGAACAAAGAATGAGAACAA TACAACAACAACATCAACAACAACAACAACAGCAGCAGCAGCAGCAGCAG CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACA ACAACGACAACAAACCAAAACAACAACAACAACAACAACAACAACAACAA CAACAACAACAGCAGCAACAAAACGAAGCTTATCGTGTGTAGGTAGGTAG GCCTCGTCAACAACGATATCTGCTTTGGGGGGAGGGGGGGTTACGTGGCG AAGTCGCCTCTTTCCGCCGGGAGAAGCGATATACACACAGCCAACAATCA ACACAAAGGCACATCTCCCACCGCTCGTCAACGATGCTTTGTGCCTCGCC CAGCGAGCAAGCCCCTCCCCCCCCCCACTCGGCGTTCCGTTTCTCGGCCG AGGGGCCGCCAGTAAACGTGTTTTAACAAGAAAGACAGAAGGGCCGGCCG CTGCGTCGATTAACTCGAGGATATGTAGAAGATTAACTGGAGGATGCTCT TATGTGCTGGTTGGTGTACGCGACAGGTGTCTGGAAGCGCGCTCGGCATG GAGGGGCAGGTGTCGGTATTTCACCACCGCCACGGGCAGGGCGATGGCGG CGGCGGTGGTGGCGGCGGCGGCGGCGGCGGATTAGGGCCTTGCTACCGCT GCGTCTTCCCGGCCCCGCTGGCGGCGGAGGCGGGGCGAAGGTGCAGCGAC AACGGTGTGCTTGGGACTGTTCCCGGTGAGAGAGGG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig7754:5234..9319+

>mRNA_L-elsbetiae_contig7754.16698.1 ID=mRNA_L-elsbetiae_contig7754.16698.1|Name=mRNA_L-elsbetiae_contig7754.16698.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1890bp|location=Sequence derived from alignment at L-elsbetiae_contig7754:5234..9319+ (Laminarionema elsbetiae ELsaHSoW15)
GAGAAACAATATACACACACACACAAACAGGCGGTCCTGGTGGGCGCTCT
CAAGGCCGAGAACGAGGCCCTGCGCGCGAGAGTAACGGAGCTCGAAGCGG
CGGCGGCGGCGAAGGAACAGGCGGCCGGAGGCTTGCAAGCGCCCACCAAC
TACCACACGGACGATAGCAGCGGCAACAACAACAACGGCGGCGGCGGCGG
CAGCGGGGATGGTGGCGGCGGCGGGGGCGGCGGCGGCAGCGGCGGCGCTT
GCAGGGGTTCTCTGGGAAAGGCGGGCATGACCGCCGCCGAGATCGCGAGG
TACTCGCGACACCTGCTGGTGCCCGCGGTTGGCGTGGAGGGCCAAAGGAG
AAACAATATACACACACACACAAACAGGCGGTCCTGGTGGGCGCTCTCAA
GGCCGAGAACGAGGCCCTGCGCGCGAGAGTAACGGAGCTCGAAGCGGCGG
CGGCGGCGAAGGAACAGGCGGCCGGAGGCTTGCAAGCGCCCACCAACTAC
CACACGGACGATAGCAGCGGCAACAACAACAACGGCGGCGGCGGCGGCAG
CGGGGATGGTGGCGGCGGCGGGGGCGGCGGCGGCAGCGGCGGCGCTTGCA
GGGGTTCTCTGGGAAAGGCGGGCATGACCGCCGCCGAGATCGCGAGGTAC
TCGCGACACCTGCTGGTGCCCGCGGTTGGCGTGGAGGGCCAAAGGAACTT
GCTCGGGAAGACGTGTTTGGTGATCGGGGCGGGAGGGCTCGCCTCGGCTG
TGCTGCCTTACCTTGCCGGCGCCGGGGTCGGACACATCAAGATTATAGAC
TTCGACAAGGAACTTGCTCGGGAAGACGTGTTTGGTGATCGGGGCGGGAG
GGCTCGCCTCGGCTGTGCTGCCTTACCTTGCCGGCGCCGGGGTCGGACAC
ATCAAGATTATAGACTTCGACAAGATCGAAACGAGCAACCTTCACAGGCA
GGTCCTGTTCAGGGAGGCACAGGCCGGGAAGAGCAAGGCCGAAACTGCCG
CCGAGGCTATCGGGGCTATCAACTCCAGCATCAGATCGAAACGAGCAACC
TTCACAGGCAGGTCCTGTTCAGGGAGGCACAGGCCGGGAAGAGCAAGGCC
GAAACTGCCGCCGAGGCTATCGGGGCTATCAACTCCAGCATCAGGTGCAC
GGCCATCGACGCGGCGCTGACCCACGACAACGCCCTGGAATCCCTGGCGG
GCGTCGACCTCGTCGTGGACGCCAGCGACAACCCGCGCACCCGGTATCTC
GTCAACGACGCCTGCGTTCTCGCAGGGAAGCCCTTGGCAAGTTTCTCCTT
CCTTGGCGTGCACGGCCATCGACGCGGCGCTGACCCACGACAACGCCCTG
GAATCCCTGGCGGGCGTCGACCTCGTCGTGGACGCCAGCGACAACCCGCG
CACCCGGTATCTCGTCAACGACGCCTGCGTTCTCGCAGGGAAGCCCTTGG
CAAGTTTCTCCTTCCTTGGCGTGTCTGGAAGCGCGCTCGGCATGGAGGGG
CAGGTGTCGGTATTTCACCACCGCCACGGGCAGGGCGATGGCGGCGGCGG
TGGTGGCGGCGGCGGCGGCGGCGGATTAGGGCCTTGCTACCGCTGCGTCT
TCCCGGCCCCGCTGGCGGCGGAGGCGGGGCGAAGGTGCAGCGACAACGGT
GTGCTTGGGACTGTTCCCGGTGAGAGAGGGGTGTCTGGAAGCGCGCTCGG
CATGGAGGGGCAGGTGTCGGTATTTCACCACCGCCACGGGCAGGGCGATG
GCGGCGGCGGTGGTGGCGGCGGCGGCGGCGGCGGATTAGGGCCTTGCTAC
CGCTGCGTCTTCCCGGCCCCGCTGGCGGCGGAGGCGGGGCGAAGGTGCAG
CGACAACGGTGTGCTTGGGACTGTTCCCGGTGAGAGAGGG
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