mRNA_L-elsbetiae_contig7733.16682.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7733.16682.1 vs. uniprot
Match: A0A6H5JN46_9PHAE (DOMON domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN46_9PHAE) HSP 1 Score: 157 bits (396), Expect = 8.370e-43 Identity = 89/183 (48.63%), Postives = 115/183 (62.84%), Query Frame = 1 Query: 82 SLKALALVLLGASQHVWGQTTQTPCRQSLSPGFDFEVDATETFTIRWSIDLAQETVSFQAVSESVSWVGIGFSSDGNMVVQDSVIGLPDEATVLEYLMEQRNINFVLPFEDAEITQGIVSQGATSTTLSFTRPLAPEAEGKLALSAETGDSNTLIYAFGQSNVLANHGPT-QRGSITLDLTCG 627 S+KA AL+LL A+Q GQ T C S + FD++V T+ F + WS+D ET+S + VS +V+W +GFSSD +MV D+VIGLP+E+TV EY + + V+ +IT G VSQ A+ TTLSFTRPLAP K A+S GD IYAFG+ N LA HG RG +TLDL CG Sbjct: 6 SIKASALLLLAAAQVGCGQNL-TSCEPSTNGAFDYQVTPTDGFEVHWSVDTVAETISIEVVSTAVAWTSLGFSSDLSMVGSDAVIGLPEESTVEEYDLTSHALAGVVLSSTQDITGGSVSQDASGTTLSFTRPLAPA--NKQAISGTPGDETIFIYAFGEGNELAFHGQAPNRGDLTLDLFCG 185
BLAST of mRNA_L-elsbetiae_contig7733.16682.1 vs. uniprot
Match: D7FJ76_ECTSI (Ferric reductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ76_ECTSI) HSP 1 Score: 153 bits (387), Expect = 2.450e-41 Identity = 88/183 (48.09%), Postives = 112/183 (61.20%), Query Frame = 1 Query: 82 SLKALALVLLGASQHVWGQTTQTPCRQSLSPGFDFEVDATETFTIRWSIDLAQETVSFQAVSESVSWVGIGFSSDGNMVVQDSVIGLPDEATVLEYLMEQRNINFVLPFEDAEITQGIVSQGATSTTLSFTRPLAPEAEGKLALSAETGDSNTLIYAFGQSNVLANHG-PTQRGSITLDLTCG 627 S+KA AL+LL A+Q GQ T C S + FD++V T+ F + WS+D ET+S + VS +V+W +GFSSD M+ D+VIGLPDE+ V EY + + VLP +IT G VSQ A+ TTLSFTRPLAP K A+S GD +YAFG N L HG RGS+ LDL CG Sbjct: 6 SIKASALLLLAAAQLGCGQDL-TSCEPSTNGAFDYQVTPTDGFDVHWSVDTVAETISVEVVSTAVAWTSLGFSSDLMMIGSDAVIGLPDESAVEEYDLISQTTAGVLPSATQDITGGSVSQDASGTTLSFTRPLAPA--NKQAISGTPGDETIFLYAFGGDNELGFHGLAPNRGSLVLDLFCG 185
BLAST of mRNA_L-elsbetiae_contig7733.16682.1 vs. uniprot
Match: D7FYB8_ECTSI (Ferric reductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYB8_ECTSI) HSP 1 Score: 94.0 bits (232), Expect = 1.220e-19 Identity = 53/106 (50.00%), Postives = 65/106 (61.32%), Query Frame = 1 Query: 313 MVVQDSVIGLPDEATVLEYLMEQRNINFVLPFEDAEITQGIVSQGATSTTLSFTRPLAPEAEGKLALSAETGDSNTLIYAFGQSNVLANHG-PTQRGSITLDLTCG 627 M+ D+VIGLPDE+TV EY + + V +IT G+VSQ A+ TTLSFTRPLAP K A+S GD ++AFG N L HG P RGS+ LDL CG Sbjct: 1 MIGSDAVIGLPDESTVEEYDLTSQTTARVFSSATQDITGGLVSQDASGTTLSFTRPLAPT--NKQAISGTPGDETIFLFAFGADNELGYHGLPPNRGSLVLDLFCG 104
BLAST of mRNA_L-elsbetiae_contig7733.16682.1 vs. uniprot
Match: A0A6H5JKV6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JKV6_9PHAE) HSP 1 Score: 89.7 bits (221), Expect = 3.300e-17 Identity = 59/153 (38.56%), Postives = 82/153 (53.59%), Query Frame = 1 Query: 163 SLSPGFDFEVDATETFTIRWSIDLAQETVSFQAVSESVSWVGIGFSSDGNMVVQDSVIGLPDEATVLEYLMEQRNINFVLPFE--DAEITQGIVSQGATSTTLSFTRPLAPEAEGKLALSAETGDSNTLIYAFGQSNVLANHGPTQRGSITLD 615 S P F++EV E + WS+ +VS +AV + ++ IGFS G+M D+VIGLPDEAT LEY M+ ++ P E D EI+ ++Q TTL+F R L P +GK LS + +YA+G SN H S+TLD Sbjct: 213 SSDPDFEYEVAPHEDLALFWSV--VGTSVSVKAVYQGEGYLSIGFSDSGSMPGSDAVIGLPDEATALEYDMD----SYGTPEEAADQEISNATITQVDGVTTLTFVRLLEPAGDGKQILSVS--EPTAWLYAWGGSNTFQEHSTRGAVSLTLD 357
BLAST of mRNA_L-elsbetiae_contig7733.16682.1 vs. uniprot
Match: A0A6H5K1N0_9PHAE (DOMON domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K1N0_9PHAE) HSP 1 Score: 73.2 bits (178), Expect = 1.070e-11 Identity = 49/137 (35.77%), Postives = 71/137 (51.82%), Query Frame = 1 Query: 256 QAVSE--SVSWVGIGFSSDGNMVVQDSVIGLPDEATVLEYLMEQRNINFVLPF------------EDAEITQGIVSQGATSTTLSFTRPLAPEAEGKLALSAETGDSNTLIYAFGQSNVLANHGPTQRGSITLDLTC 624 QA+S +V W+ IGFSSDGNM+ D+V+G + VLEY + + + P ++ EIT ++ + T+LSFTRP PE GK AL A S L++A G + H RG+ ++DL C Sbjct: 110 QAISADFNVGWLAIGFSSDGNMIGSDAVVGSIEG--VLEYDLGSKGLPVQPPLSPLEASIRPYSVDEQEITGAVLERDENVTSLSFTRPTIPEVSGKQALLAGADTSAILLWAAGSDDSFGYHF-LGRGAFSIDLAC 243
BLAST of mRNA_L-elsbetiae_contig7733.16682.1 vs. uniprot
Match: A0A7S2Q318_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2Q318_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 5.850e-9 Identity = 44/128 (34.38%), Postives = 68/128 (53.12%), Query Frame = 1 Query: 244 TVSFQAVSESVSWVGIGFSSDGNMVVQDSVIGLPDEATVLEYLMEQRNINFVLPFEDAE---ITQGIVSQGATSTTLSFTRPLAPEAEGKLALSAETGDSNTLIYAFGQSNVLANHGPTQRGSITLDL 618 T++ + + E V+W+GIGFS DG M ++VIG+ + +Y ++ R + V P +D++ I I T L FT+ + + E +L+ GD NT +YA GQS L H RGS L+L Sbjct: 417 TITMELICEGVTWLGIGFSQDGQMAGSEAVIGVLGQEP-RKYNLDGRYMGGVNPMDDSQQTLIDASINVYRGPITVLKFTKIMREQGEIELS----PGD-NTFLYAQGQSYYLGQHAHDSRGSFQLNL 538
BLAST of mRNA_L-elsbetiae_contig7733.16682.1 vs. uniprot
Match: K0T574_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T574_THAOC) HSP 1 Score: 62.8 bits (151), Expect = 6.290e-8 Identity = 45/158 (28.48%), Postives = 78/158 (49.37%), Query Frame = 1 Query: 187 EVDATETFTIRWSIDLAQETVSFQAVSESVS---------WVGIGFSSDGNMVVQDSVIGLPDEATVLEYLMEQRNINFV--LPFEDAEITQGIVSQGATSTTLSFTRPLAPEAEGKLALSAETGDSNTLIYAFGQSNVLANHGPTQRGSITLDLTCG 627 + D T+ +T+++ I++ +T + V ++S W+ +GFS+DG MV D+VIG+P V +Y+M + ++ V +P +T V T + FT+ + E + + GD N ++A+G S L H R S LDL+ G Sbjct: 222 DADLTDGYTMKYKINVPPDTSKEECVGCTMSVEMYYDGDAWIALGFSTDGQMVGSDAVIGIPGSG-VSKYVMAGKTVSQVTEMPESQQTLTDSSVEFDGQQTVMKFTKIMDEPDEVPIVV----GD-NMFLWAYGSSPTLGYHAG--RASFALDLSIG 371
BLAST of mRNA_L-elsbetiae_contig7733.16682.1 vs. uniprot
Match: A0A226EC23_FOLCA (DBH-like monooxygenase protein 1 n=2 Tax=Folsomia candida TaxID=158441 RepID=A0A226EC23_FOLCA) HSP 1 Score: 54.7 bits (130), Expect = 3.320e-5 Identity = 40/149 (26.85%), Postives = 69/149 (46.31%), Query Frame = 1 Query: 190 VDATETFTIRWSIDLAQETVSFQAVSESVSWVGIGFSSDGNMVVQDSVIG--LPDEATVLEYLMEQRNINFVLP----FEDAEITQGIVSQGATSTTLSFTRPLAPEAEGKLALSAETGDSNTLIYAFGQSNVLANHGPTQRGSITLDL 618 +D + + W I+ A + + F+ +E++ WVG G S G M D IG L D +T Y ++ I P D + + + T L F+R L + + D+N LI+A G ++++ HG T+RG+ + +L Sbjct: 56 LDGEGKYILGWEINEAGDEIVFEVEAETLGWVGFGISPQGGMTGADIFIGGVLSDGST---YAQDRFGIGRTEPKVDDHSDWRLLEAMELPSMGKTILKFSRLLDTCDDEDYLIG---NDTNRLIWAMGDADIIRYHGTTRRGTKSTNL 198
BLAST of mRNA_L-elsbetiae_contig7733.16682.1 vs. uniprot
Match: B5YMR0_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YMR0_THAPS) HSP 1 Score: 53.9 bits (128), Expect = 6.550e-5 Identity = 42/131 (32.06%), Postives = 65/131 (49.62%), Query Frame = 1 Query: 202 ETFTIRWSIDLAQETVSFQAVSESVSWVGIGFSSDGNMVVQDSVIGLPDEA-TVLEYLMEQRNINFVLPFEDAE--ITQGIVSQGATSTTLSFTRPLAPEAEGKLALSAETGDSNTLIYAFGQSNVLANHG 585 E +R S D E +Q E ++WVG+ FS+DGNM+ ++VIG P + +V +Y + + + P E + +T V T + FT+ L E E ++ GD NTL++A G S HG Sbjct: 404 ERCEVRLSPDYLLE---YQLTYEGIAWVGLAFSTDGNMIGSEAVIGNPMISNSVGKYYLGGKYNAAITPMEVEKQTLTDASVELVDDQTIMRFTKLLKEEGEIEIV----AGD-NTLLWAHGSSTFTTYHG 526 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7733.16682.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7733.16682.1 >prot_L-elsbetiae_contig7733.16682.1 ID=prot_L-elsbetiae_contig7733.16682.1|Name=mRNA_L-elsbetiae_contig7733.16682.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=213bp PAARSLATRKFLQLPVSLQHIFDMNYPSLKALALVLLGASQHVWGQTTQTback to top mRNA from alignment at L-elsbetiae_contig7733:2989..7687- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7733.16682.1 ID=mRNA_L-elsbetiae_contig7733.16682.1|Name=mRNA_L-elsbetiae_contig7733.16682.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4699bp|location=Sequence derived from alignment at L-elsbetiae_contig7733:2989..7687- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7733:2989..7687- >mRNA_L-elsbetiae_contig7733.16682.1 ID=mRNA_L-elsbetiae_contig7733.16682.1|Name=mRNA_L-elsbetiae_contig7733.16682.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1278bp|location=Sequence derived from alignment at L-elsbetiae_contig7733:2989..7687- (Laminarionema elsbetiae ELsaHSoW15)back to top |