mRNA_L-elsbetiae_contig7730.16680.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig7730.16680.1
Unique NamemRNA_L-elsbetiae_contig7730.16680.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig7730.16680.1 vs. uniprot
Match: A0A6H5K5B9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5B9_9PHAE)

HSP 1 Score: 331 bits (848), Expect = 1.130e-106
Identity = 177/285 (62.11%), Postives = 211/285 (74.04%), Query Frame = 1
Query:    1 MSKRIV-VAIDLGTSRSAYAFSIQGRAESDVIIRTPDGSLPSVSS-LKTETAVLLQGTHPHDVLAFGRAAGERFIEEYEDYEAFGGDNGSVETATAGDTNMLFRRFKKALCEHRGYESVDDPVATAEGGQQLPLIDVMIAVLRHVKEDAIAHLSCVSEVPQTVDDIAWVLTIPAIYDDFAKRFMRVAAHKAGIISTIDSSS-LQLCLEPEAACLAISITDAPRLAQTGTKVMIVDCGGGTVDITTHEVLSVNPLRLKEMLPPTGGVWGSTCVDDEFTNWFKAFLG 846
            M K IV VA+DLGTSR+A   SI GR+E++V + TP+GS    S+ LKTETA LL+  HPH +LAFG+ A ERFI++ +  E  GG  G     T+G  NMLFR FK  LC++ GY SVD PVATAEGG+ LPL+ VM AVLRH+KED +AHLS   EV  TV D+ WV+TIPAIYDDFAKRFMRV+AH+AGIIS +D +S LQLCLEPEAACLA+SI +AP LA+ G K+MIVDCGGGTVDITTH V S  PL+LKE+  PTGG WGS CVD  F  W +   G
Sbjct:    1 MPKGIVDVAVDLGTSRTAIGISIPGRSENEVTVCTPNGSGHCRSAQLKTETAALLEAKHPHGLLAFGKTARERFIKDAQRDEDGGGCTGR--RTTSGAPNMLFRFFKTELCKNSGYTSVDQPVATAEGGETLPLMTVMTAVLRHIKEDVLAHLSQRLEVDPTVADVNWVVTIPAIYDDFAKRFMRVSAHRAGIISAVDDASQLQLCLEPEAACLAVSIKEAPLLAKAGIKLMIVDCGGGTVDITTHSVESRRPLKLKELATPTGGEWGSVCVDSMFMVWLRKLFG 283          
BLAST of mRNA_L-elsbetiae_contig7730.16680.1 vs. uniprot
Match: D7G6V4_ECTSI (Heat shock protein 70 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6V4_ECTSI)

HSP 1 Score: 226 bits (576), Expect = 2.540e-66
Identity = 134/282 (47.52%), Postives = 179/282 (63.48%), Query Frame = 1
Query:   16 VVAIDLGTSRSAYAFSIQGRAESDVIIRTPDGSLPSVSS-LKTETAVLLQGTHPHDVLAFGRAAGERFIEEYEDYEAFGGDNGSVETATAGDTNMLFRRFKKALCEHRGYESVDDPVATAE-GGQQ-LPLIDVMIAVLRHVKEDAIAHLSCVSEVPQTVDDIAWVLTIPAIYDDFAKRFMRVAAHKAGIISTIDSSSLQLCLEPEAACLAISITDAPRLAQT-GTKVMIVDCGGGTVDITTHEVLSVNPLRLKEMLPPTGGVWGSTCVDDEFTNWFKAFLGE 849
            VVAID GT+RSA+A+ + G+A++ ++++ P  +  S SS +KTETA L+ G     +++FG AA        EDY A      S   A       LFR FK  LCE R  ++    V T   GGQ  +PL+ VM A LR+ KED +A LS        V+ + WVLT+PAIYDDFAKRFMR AA++AG+I  ++S+ L+LCLEPEAACLA   TD P  +   G  +M++DCGGGTVDIT H+++SV PL L+E+  P GG++GST VD+ F  W K FLGE
Sbjct:    7 VVAIDFGTTRSAWAYQVSGQADNKILVKIPASADTSPSSTIKTETAALIGGRGSGGLVSFGPAA-------IEDYAA------SDHVAD----QALFRWFKFDLCESRTDQTEVGSVMTESVGGQHTVPLLGVMTASLRYFKEDVLAFLSRTGGRTVDVNSVNWVLTVPAIYDDFAKRFMRQAAYEAGMIDRMNSTRLRLCLEPEAACLAAITTDNPLTSNAEGKNMMVIDCGGGTVDITAHKIISVEPLTLEEVAAPDGGLFGSTRVDNAFRVWLKGFLGE 271          
BLAST of mRNA_L-elsbetiae_contig7730.16680.1 vs. uniprot
Match: D7FKB7_ECTSI (Heat shock protein 70 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKB7_ECTSI)

HSP 1 Score: 228 bits (581), Expect = 4.040e-66
Identity = 130/298 (43.62%), Postives = 184/298 (61.74%), Query Frame = 1
Query:    1 MSKRIVVAIDLGTSRSAYAFSI-----QGRAESDVIIRTPDGSLPSVSS-LKTETAVLLQGTHPHDVLAFGRAAGERFIEEYEDYEAFGGDNGSVETATAGD-----TNMLFRRFKKALCEHR-GYESVDDPVATAEGGQQLPLIDVMIAVLRHVKEDAIAHLSCVSEVPQTVDDIAWVLTIPAIYDDFAKRFMRVAAHKAGIISTIDSSSLQLCLEPEAACLAISITDA--PRLAQT-GTKVMIVDCGGGTVDITTHEVLSVNPLRLKEMLPPTGGVWGSTCVDDEFTNWFKAFLGE 849
            M+ RIVVA+D GT+RSA+A+ +       + +  + +R P G  P+ S+  KTETA L+      +++AFG+AA ER  E                TATAG      +  LF+ +K  L + + G  +V+   AT+  G  +PL+ VM A LR+ K+DA+  LS ++       D+ WVLT+PA+YDDFAK FMR AAH+AG+I  + S++L+LCLEPEAACLA+    A  P   +  G K+MIVDCGGGTVDITTH +++++PL + E+  PTGG WGST VD+ F  W + FLG+
Sbjct:   92 MAPRIVVAVDFGTTRSAWAYKVGDDEPDDKTDDKIFVRIPGGVGPAPSARTKTETAALINRRGRGELVAFGQAALERHAEN---------------TATAGGDPSDASEALFKWYKTTLFKPKPGENTVERVTATSTSGDVVPLLGVMTATLRYFKKDAVGFLSSLTGRTIRARDVNWVLTVPAVYDDFAKHFMRQAAHEAGMIDKVGSTNLRLCLEPEAACLAVIPRGANNPLTCEAEGKKMMIVDCGGGTVDITTHNIVTIDPLNVVEVAAPTGGAWGSTQVDEAFKKWLQRFLGD 374          
BLAST of mRNA_L-elsbetiae_contig7730.16680.1 vs. uniprot
Match: A0A6H5JSM6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSM6_9PHAE)

HSP 1 Score: 219 bits (558), Expect = 1.210e-63
Identity = 128/281 (45.55%), Postives = 170/281 (60.50%), Query Frame = 1
Query:   16 VVAIDLGTSRSAYAFSIQGRAESDVIIRTPDGSLPSVSSLKTETAVLLQGTHPHDVLAFGRAAGERFIEEYEDYEAFGGDNGSVETATAGDTNMLFRRFKKALCEHRGYESVDDPVAT--AEGGQQLPLIDVMIAVLRHVKEDAIAHLSCVSEVPQTVDDIAWVLTIPAIYDDFAKRFMRVAAHKAGIISTIDSSSLQLCLEPEAACLAISITDAPRLAQ-TGTKVMIVDCGGGTVDITTHEVLSVNPLRLKEMLPPTGGVWGSTCVDDEFTNWFKAFLGE 849
            +VAID GT+RSA+A+ + G+A++ ++++    +  S SS KTET  L+ G    D++AFG AA    I+EY        DN         D   LFR FK  LCE R   +    V T   E    +PL+ VM A LR+ KED +  LS        V+ + WVLT+PAIYDDFAKRFMR AA +AG+I  + S+ L+LCLEPEAACLA  + D P  +  T  K+M++DCGGG VDIT H+++SV PL L E+  P GG++GST VD  F  W K FLG+
Sbjct:   12 IVAIDFGTTRSAWAYQVSGQADNTILVKILASADTSASSTKTETVALIGGRGSGDLIAFGPAA----IDEYA-----ASDN--------PDDQALFRWFKLDLCESRPDHTDFASVMTESVEARHTVPLLGVMTASLRYFKEDVLGCLSRTGGRTVDVNRVNWVLTVPAIYDDFAKRFMRQAAFEAGMIDRVHSTRLRLCLEPEAACLAAIVKDNPLTSDATDKKMMVIDCGGGIVDITAHKIISVEPLILDEVAAPDGGLFGSTRVDHAFKVWLKEFLGD 275          
BLAST of mRNA_L-elsbetiae_contig7730.16680.1 vs. uniprot
Match: D7FNB5_ECTSI (Heat shock protein 70-putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNB5_ECTSI)

HSP 1 Score: 179 bits (454), Expect = 2.870e-48
Identity = 118/288 (40.97%), Postives = 163/288 (56.60%), Query Frame = 1
Query:   13 IVVAIDLGTSRSAYAFSIQGRAESDVIIRTPDGSLPSVS-SLKTETAVLLQGTHPHDVLAFGRAAGERFIEEYEDYEAFGGDNGSVETATAGDTNMLFRRFKKALC----EHRGYESVDDPVATAEGGQQLPLIDVMIAVLRHVKEDAIAHLSCVSEVPQTVDD--IAWVLTIPAIYDDFAKRFMRVAAHKAGIISTI-DSSSLQLCLEPEAACLAI-SITDAPRLAQTGTKVMIVDCGGGTVDITTHEVLSVNPLRLKEMLPPTGGVWGSTCVDDEFTNWFKAFLGE 849
            IV AIDLGTSR+AYA+++ GR    + +  PD      +   KT TAVL+Q     +     R AG     E EDY     D    +  +     +LF+ FK  L     E R    VD+P A A GG+ LP+I V+   + ++K   +  +S +++     DD  + WV+T+PAI+ +F KRFMR A+H+AG+I+   D   L+LCLEPEAACLA+ S          G K+M++DCGGGT+DIT+H V S +PL+L E+  P GG WGS+ VD  F    KAFL E
Sbjct:    6 IVAAIDLGTSRTAYAYTVVGREH--IWLGVPDSPDDDRNVERKTLTAVLMQRCDEDEAEGGWRVAGFGDTAE-EDYLTAKADEADEDRGSL----VLFKFFKMELYQGGREQRARMDVDEPTAKAVGGEVLPMIFVVSKAIEYIKNQILDRVSMIAQ----EDDARLMWVVTVPAIWSNFGKRFMRAASHRAGLIADENDMQGLKLCLEPEAACLAVESSNQGVGSWHPGDKIMVLDCGGGTIDITSHLVESSDPLQLSELAEPCGGAWGSSIVDTRF----KAFLQE 278          
BLAST of mRNA_L-elsbetiae_contig7730.16680.1 vs. uniprot
Match: A0A6H5K4X7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4X7_9PHAE)

HSP 1 Score: 168 bits (425), Expect = 3.630e-47
Identity = 115/287 (40.07%), Postives = 162/287 (56.45%), Query Frame = 1
Query:   13 IVVAIDLGTSRSAYAFSIQGRAESDVIIRTPDGSLPSVSSL--KTETAVLLQGTHPHD----VLAFGRAAGERFIEEYEDYEAFGGDNGSVETATAGDTNMLFRRFKKALCE--HRGYE--SVDDPVATAEGGQ-QLPLIDVMIAVLRHVKEDAIAHLSCVSEVPQTVDDIAWVLTIPAIYDDFAKRFMRVAAHKAGIISTI-DSSSLQLCLEPEAACLAISITDAP-RLAQTGTKVMIVDCGGGTVDITTHEVLSVNPLRLKEMLPPTGGVWGSTCVDDEFTNWFK 834
            ++ AIDLGTSRSAYA+++ GR E  +I+  P     S  ++  KT TAVLL+ +  +     ++ FG  A + ++      +A  GD        A     LF+ FK  L +    G +  S+DD    +E  + +LPL+ V+   L ++K+  I  L+          DI WVLT+PAI+  F K FMR AA +AG+I    D   L+LCLEPEAACL +       R  +TG KVM++DCGGGTVDITTH V+ ++PL L+E+  PTGG WGST  D +F  + K
Sbjct:    5 VIAAIDLGTSRSAYAYTVVGRDE--IILGVPGRLNESKVAVERKTATAVLLRRSSENRGGWCMVTFGDGAEQEYL------DARNGDG------EAAGNLALFKYFKMELFKGGRNGTKRSSIDDAEGISEDEKTRLPLVYVVSLALEYIKDVIINRLNNADSHTLRASDIRWVLTVPAIWSSFGKAFMRSAALRAGLIQDENDMEHLRLCLEPEAACLTVEHHHHNIRKWETGMKVMVLDCGGGTVDITTHHVVRMDPLGLEELEEPTGGPWGSTTADTKFKLFIK 277          
BLAST of mRNA_L-elsbetiae_contig7730.16680.1 vs. uniprot
Match: D7G266_ECTSI (Heat shock protein 70 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G266_ECTSI)

HSP 1 Score: 166 bits (421), Expect = 1.070e-43
Identity = 115/290 (39.66%), Postives = 158/290 (54.48%), Query Frame = 1
Query:   13 IVVAIDLGTSRSAYAFSIQGRAESDVIIRTPDGSLPSVSSL--KTETAVLLQGTHPHD----VLAFGRAAGERFIEEYEDYEAFGGDNGSVETATAGDTNMLFRRFKKALCE--HRGYE--SVDDPVATAEGGQ-QLPLIDVMIAVLRHVKEDAIAHLSCVSEVPQTVDDIAWVLTIPAIYDDFAKRFMRVAAHKAGIISTI-DSSSLQLCLEPEAACLAISITDAP-RLAQTGTKVMIVDCGGGTVDITTHEVLSVNPLRLKEMLPPTGGVWGSTCVDDEFTNWFKAFL 843
            ++ AIDLGTSRSAYA+++ GR   D+I+  P     S  S+  KT TA+LL+          ++ FG  A + ++E            G  E+  A     LF+ FK  L +   +G +  SVDD    +E  + +LPLI V+   L ++K+  I  L+          DI WVLT+PAI+  F   FMR AA +AG+I    D   L+LCLEPEAACL +          + G KVM++DCGGGT+DITTH V+S NPL L+E+  P GG WGST  D +F  + K  L
Sbjct:    5 VIAAIDLGTSRSAYAYTVTGR--DDIILGVPGRLNESKVSVERKTATAILLKRAPKKSGGWCMVTFGDGAEQEYLEART-------KGGEAESDLA-----LFKYFKMELFKGGRKGTKRSSVDDAEGISEDQKTRLPLIYVVSLALEYIKDVVINRLNKADSHTLKAFDIRWVLTVPAIWSSFGTTFMRTAALRAGLIQRENDMEHLRLCLEPEAACLTVEHHHRNVHKWENGMKVMVLDCGGGTIDITTHHVVSTNPLGLEELEEPAGGPWGSTTADAKFKLFIKELL 280          
BLAST of mRNA_L-elsbetiae_contig7730.16680.1 vs. uniprot
Match: L1K181_GUITC (Heat shock protein 70-like protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1K181_GUITC)

HSP 1 Score: 160 bits (404), Expect = 2.610e-41
Identity = 108/281 (38.43%), Postives = 145/281 (51.60%), Query Frame = 1
Query:   19 VAIDLGTSRSAYAFSIQGRAESDVIIRTPDGSLPSVSSLKTETAVLLQGTHPHDVLAFGRAAGERFIEEYEDYEAFGGDNGSVETATAGDTNMLF-RRFKKALCEHRGYESVDDPVATAEGGQQLPLIDVMIAVLRHVKEDAIAHLSCVSEVPQTVDDIAWVLTIPAIYDDFAKRFMRVAAHKAGIISTIDSSSLQLCLEPEAACLAISITDAPRLAQTGTKVMIVDCGGGTVDITTHEVLSVNPLRLKEMLPPTGGVWGSTCVDDEFTNWFKAFLGEHQY 858
            V ID GTSR+ +A++   R + ++  R P G  P     KT T +LL  T   + +AFG  A E + E                    GD + LF   FK  L E  G      PV +A  G++  L  V+   L++VK++A+A L+  S V    D + WV+T+PAI+ D AK  MR AA  A +I    S  LQL LEPEAAC+     +     + G + M+VDCGGGT+DIT   V S NPL L E+  P+GG WGST VD EF  +    LGE  +
Sbjct:   34 VGIDFGTSRTGFAYAFMDRQD-EIFCREPGGQEPG----KTLTNLLL--TRDEEFIAFGSRAREEYYE--------------------GDPSALFFENFKMLLNEVDGGSY---PVVSALNGREASLRTVLAHSLKYVKDEAMATLNRCSAVEIKADQVKWVVTVPAIWSDCAKAMMRKAALDAALIKEETSQLLQLALEPEAACMVCERENV--CLRAGDQFMVVDCGGGTIDITMSCVHSCNPLSLDELAAPSGGPWGSTYVDREFEKFILELLGEQAF 282          
BLAST of mRNA_L-elsbetiae_contig7730.16680.1 vs. uniprot
Match: A0A6P4Y370_BRABE (heat shock 70 kDa protein 12A-like n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4Y370_BRABE)

HSP 1 Score: 155 bits (393), Expect = 7.260e-40
Identity = 111/290 (38.28%), Postives = 160/290 (55.17%), Query Frame = 1
Query:   13 IVVAIDLGTSRSAYAFSIQGRAESDVIIRTPDGSLPSVSSLKTETAVLLQGTHPHDVLAFGRAAGERF---IEEYEDYEAFGGDNGSVETATAGDTNMLFRRFKKALCEHRGYESVDDPV-ATAEGGQQLPLIDVMIAVLRHVKE---DAIAHLSCVSEVPQTVDDIAWVLTIPAIYDDFAKRFMRVAAHKAGIISTIDSSSLQLCLEPEAA---CLAISI-----------TDAPRLAQTGTKVMIVDCGGGTVDITTHEVLSVNPLRLKEMLPPTGGVWGSTCVDDEF 819
            +V AID GT+ S YAFS     + D+I+    G+     S KT T+VLL  +   +++AFG  A  ++   +EE ED + +                  F RFK  L  H  Y+ +D  V  TA+ G+ LP +DV    LR++K+   DAIA +S   ++ +  +DI WV+T+PAI++D AK+FMR AA+ A I+S  ++  L + LEPE+A   C  + +           +D   +A  GT+ M+VDCGGGTVDIT HEV   N  R+KE    TGG WG T VD++F
Sbjct:   11 MVAAIDFGTTYSGYAFSFMSSPD-DIIVNKNWGADVGFQSYKTPTSVLL--SPEGELVAFGFEACAKYTTLLEENEDKDYY-----------------FFDRFKMRL--HASYKDLDRSVYLTAKNGRTLPALDVFTHALRYLKQHMMDAIAEVSQSMQIRE--EDIRWVITVPAIWNDAAKQFMREAAYDANIVSKANAKKLVIALEPESASLFCRELPVNQFAGEREGDGSDTLNMAP-GTRYMVVDCGGGTVDITVHEVRPDN--RVKEAYAATGGAWGGTQVDEQF 273          
BLAST of mRNA_L-elsbetiae_contig7730.16680.1 vs. uniprot
Match: C3ZGF9_BRAFL (Uncharacterized protein n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3ZGF9_BRAFL)

HSP 1 Score: 152 bits (384), Expect = 1.280e-38
Identity = 111/296 (37.50%), Postives = 153/296 (51.69%), Query Frame = 1
Query:   13 IVVAIDLGTSRSAYAFSIQGRAESDVIIRTPDGSLPSVSSLKTETAVLLQGTHPHDVLAFGRAAGERF---IEEYEDYEAFGGDNGSVETATAGDTNMLFRRFKKALCEHRGYESVDDPV-ATAEGGQQLPLIDVMIAVLRHVKEDAIAHLSCVSEVPQTVD-DIAWVLTIPAIYDDFAKRFMRVAAHKAGIISTIDSSSLQLCLEPEAACLAI-----------SITDAPRLAQT-GTKVMIVDCGGGTVDITTHEVLSVNPLRLKEMLPPTGGVWGSTCVDDEFTNWFKAFLGE 849
            +V AID GT+ S YAFS     E D+I+    G      S KT T+VLL  +     + FG  A  ++   +EE ED E F                  F RFK  L  H  Y+ +D  V  TA  G++LP  DV    LR++K+  +  ++ VS+     D DI WV+T+PAI++D AK+FMR AA+ A I+S  +   L + LEPE+A L             S     +L    GT+ M++DCGGGTVDITTHE+   N  R+KE+   TGG WG T VD++F    +   G+
Sbjct:    7 MVAAIDFGTTYSGYAFSFMSSPE-DIIMNKNWGESVGFQSYKTPTSVLL--SPEGKFVEFGFKAIAKYTTLLEENEDKEYF-----------------FFDRFKMRL--HASYQDLDRNVYLTALNGKRLPATDVFSHALRYLKQHMMKEIAKVSQTIHIGDEDIRWVITVPAIWNDAAKQFMREAAYNANIVSKTNPQHLVIALEPESASLYCRELPVNQFMGESADGNDKLNMPPGTRYMVIDCGGGTVDITTHEIRPDN--RVKEVYAATGGAWGGTQVDEQFVALIELVFGK 278          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7730.16680.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K5B9_9PHAE1.130e-10662.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G6V4_ECTSI2.540e-6647.52Heat shock protein 70 n=1 Tax=Ectocarpus siliculos... [more]
D7FKB7_ECTSI4.040e-6643.62Heat shock protein 70 n=2 Tax=Ectocarpus TaxID=287... [more]
A0A6H5JSM6_9PHAE1.210e-6345.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FNB5_ECTSI2.870e-4840.97Heat shock protein 70-putative n=2 Tax=Ectocarpus ... [more]
A0A6H5K4X7_9PHAE3.630e-4740.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G266_ECTSI1.070e-4339.66Heat shock protein 70 n=1 Tax=Ectocarpus siliculos... [more]
L1K181_GUITC2.610e-4138.43Heat shock protein 70-like protein n=1 Tax=Guillar... [more]
A0A6P4Y370_BRABE7.260e-4038.28heat shock 70 kDa protein 12A-like n=1 Tax=Branchi... [more]
C3ZGF9_BRAFL1.280e-3837.50Uncharacterized protein n=1 Tax=Branchiostoma flor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7730contigL-elsbetiae_contig7730:402..1259 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score161.0
Seed ortholog evalue8.2e-37
Seed eggNOG ortholog55529.EKX54611
Preferred nameHSPA12A
Hectar predicted targeting categoryother localisation
EggNOG free text desc.ATP binding
EggNOG OGsCOG0443@1,KOG0101@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons1
Model size858
Cds size858
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816858.7219691-CDS-L-elsbetiae_contig7730:401..12591622816858.7219691-CDS-L-elsbetiae_contig7730:401..1259Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7730 402..1259 -
1691683866.7798016-CDS-L-elsbetiae_contig7730:401..12591691683866.7798016-CDS-L-elsbetiae_contig7730:401..1259Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7730 402..1259 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7730.16680.1prot_L-elsbetiae_contig7730.16680.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig7730 402..1259 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig7730.16680.1

>prot_L-elsbetiae_contig7730.16680.1 ID=prot_L-elsbetiae_contig7730.16680.1|Name=mRNA_L-elsbetiae_contig7730.16680.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=286bp
MSKRIVVAIDLGTSRSAYAFSIQGRAESDVIIRTPDGSLPSVSSLKTETA
VLLQGTHPHDVLAFGRAAGERFIEEYEDYEAFGGDNGSVETATAGDTNML
FRRFKKALCEHRGYESVDDPVATAEGGQQLPLIDVMIAVLRHVKEDAIAH
LSCVSEVPQTVDDIAWVLTIPAIYDDFAKRFMRVAAHKAGIISTIDSSSL
QLCLEPEAACLAISITDAPRLAQTGTKVMIVDCGGGTVDITTHEVLSVNP
LRLKEMLPPTGGVWGSTCVDDEFTNWFKAFLGEHQY
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mRNA from alignment at L-elsbetiae_contig7730:402..1259-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig7730.16680.1 ID=mRNA_L-elsbetiae_contig7730.16680.1|Name=mRNA_L-elsbetiae_contig7730.16680.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=858bp|location=Sequence derived from alignment at L-elsbetiae_contig7730:402..1259- (Laminarionema elsbetiae ELsaHSoW15)
ATGTCGAAGAGAATCGTCGTTGCCATCGACCTCGGCACGAGCCGCAGCGC CTACGCGTTTTCGATCCAGGGGCGAGCAGAATCAGATGTGATTATTCGCA CGCCCGACGGCAGCCTGCCGTCTGTCTCATCTTTGAAGACAGAGACCGCT GTTCTCCTACAGGGCACTCATCCTCATGATGTACTCGCCTTCGGCCGTGC TGCCGGTGAGCGCTTCATCGAAGAATACGAGGATTACGAGGCTTTCGGCG GCGACAACGGCTCTGTCGAAACCGCCACCGCGGGCGATACCAATATGCTG TTCCGCCGGTTCAAGAAGGCGCTGTGTGAGCACCGCGGCTACGAGTCCGT AGACGACCCCGTGGCTACGGCGGAGGGGGGGCAACAGCTGCCGCTCATCG ATGTGATGATTGCCGTTTTGCGCCACGTGAAAGAAGACGCTATCGCCCAC CTATCGTGCGTGAGCGAGGTGCCCCAGACTGTGGACGACATTGCATGGGT GCTGACAATCCCGGCGATCTACGACGACTTCGCCAAGCGCTTCATGCGCG TTGCTGCCCACAAAGCCGGCATAATTTCAACGATCGACAGCTCGAGCCTT CAGTTGTGCCTAGAACCCGAGGCGGCATGCCTCGCCATCAGCATCACGGA CGCGCCACGCCTTGCGCAGACGGGCACGAAGGTTATGATTGTGGACTGCG GGGGCGGCACGGTGGACATCACCACTCACGAGGTATTGTCCGTAAACCCA TTGCGCTTGAAGGAGATGCTGCCGCCGACGGGAGGAGTGTGGGGCTCTAC GTGCGTGGACGACGAGTTCACGAACTGGTTCAAGGCTTTCCTCGGGGAAC ATCAGTAC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig7730:402..1259-

>mRNA_L-elsbetiae_contig7730.16680.1 ID=mRNA_L-elsbetiae_contig7730.16680.1|Name=mRNA_L-elsbetiae_contig7730.16680.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1716bp|location=Sequence derived from alignment at L-elsbetiae_contig7730:402..1259- (Laminarionema elsbetiae ELsaHSoW15)
ATGTCGAAGAGAATCGTCGTTGCCATCGACCTCGGCACGAGCCGCAGCGC
CTACGCGTTTTCGATCCAGGGGCGAGCAGAATCAGATGTGATTATTCGCA
CGCCCGACGGCAGCCTGCCGTCTGTCTCATCTTTGAAGACAGAGACCGCT
GTTCTCCTACAGGGCACTCATCCTCATGATGTACTCGCCTTCGGCCGTGC
TGCCGGTGAGCGCTTCATCGAAGAATACGAGGATTACGAGGCTTTCGGCG
GCGACAACGGCTCTGTCGAAACCGCCACCGCGGGCGATACCAATATGCTG
TTCCGCCGGTTCAAGAAGGCGCTGTGTGAGCACCGCGGCTACGAGTCCGT
AGACGACCCCGTGGCTACGGCGGAGGGGGGGCAACAGCTGCCGCTCATCG
ATGTGATGATTGCCGTTTTGCGCCACGTGAAAGAAGACGCTATCGCCCAC
CTATCGTGCGTGAGCGAGGTGCCCCAGACTGTGGACGACATTGCATGGGT
GCTGACAATCCCGGCGATCTACGACGACTTCGCCAAGCGCTTCATGCGCG
TTGCTGCCCACAAAGCCGGCATAATTTCAACGATCGACAGCTCGAGCCTT
CAGTTGTGCCTAGAACCCGAGGCGGCATGCCTCGCCATCAGCATCACGGA
CGCGCCACGCCTTGCGCAGACGGGCACGAAGGTTATGATTGTGGACTGCG
GGGGCGGCACGGTGGACATCACCACTCACGAGGTATTGTCCGTAAACCCA
TTGCGCTTGAAGGAGATGCTGCCGCCGACGGGAGGAGTGTGGGGCTCTAC
GTGCGTGGACGACGAGTTCACGAACTGGTTCAAGGCTTTCCTCGGGGAAC
ATCAGTACATGTCGAAGAGAATCGTCGTTGCCATCGACCTCGGCACGAGC
CGCAGCGCCTACGCGTTTTCGATCCAGGGGCGAGCAGAATCAGATGTGAT
TATTCGCACGCCCGACGGCAGCCTGCCGTCTGTCTCATCTTTGAAGACAG
AGACCGCTGTTCTCCTACAGGGCACTCATCCTCATGATGTACTCGCCTTC
GGCCGTGCTGCCGGTGAGCGCTTCATCGAAGAATACGAGGATTACGAGGC
TTTCGGCGGCGACAACGGCTCTGTCGAAACCGCCACCGCGGGCGATACCA
ATATGCTGTTCCGCCGGTTCAAGAAGGCGCTGTGTGAGCACCGCGGCTAC
GAGTCCGTAGACGACCCCGTGGCTACGGCGGAGGGGGGGCAACAGCTGCC
GCTCATCGATGTGATGATTGCCGTTTTGCGCCACGTGAAAGAAGACGCTA
TCGCCCACCTATCGTGCGTGAGCGAGGTGCCCCAGACTGTGGACGACATT
GCATGGGTGCTGACAATCCCGGCGATCTACGACGACTTCGCCAAGCGCTT
CATGCGCGTTGCTGCCCACAAAGCCGGCATAATTTCAACGATCGACAGCT
CGAGCCTTCAGTTGTGCCTAGAACCCGAGGCGGCATGCCTCGCCATCAGC
ATCACGGACGCGCCACGCCTTGCGCAGACGGGCACGAAGGTTATGATTGT
GGACTGCGGGGGCGGCACGGTGGACATCACCACTCACGAGGTATTGTCCG
TAAACCCATTGCGCTTGAAGGAGATGCTGCCGCCGACGGGAGGAGTGTGG
GGCTCTACGTGCGTGGACGACGAGTTCACGAACTGGTTCAAGGCTTTCCT
CGGGGAACATCAGTAC
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