mRNA_L-elsbetiae_contig7713.16657.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7713.16657.1 vs. uniprot
Match: D7FU28_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU28_ECTSI) HSP 1 Score: 234 bits (596), Expect = 4.820e-70 Identity = 103/157 (65.61%), Postives = 118/157 (75.16%), Query Frame = 1 Query: 1 AEYLGCHHDRKNDRVLGDMFNSPDMTLAVCLEYCTSKGALFMAVQFGFECWCSDDDDLEYERHFERDGEDAVCDMSCLGDETVTCGGYNSFDLYKLST-----CSGNPVEAYEQCGGLDWEGSTCCFDGYECTEMGADGCYSQCRPIEDAGSVTPSP 456 AEY+GC HD K DR+LGD +S DMT VCL +CT GA FMA QFGFECWCS D+ L+YERH++ + DAVCDMSC GD+T CGG+NSFDLYKL T CSG PVEAYEQCGG DW GSTCC DGY+CT+M DGCY+QCRP +TPSP Sbjct: 396 AEYVGCFHDNKEDRILGDKLDSVDMTTEVCLAHCTELGAAFMATQFGFECWCSADELLDYERHYQMNDADAVCDMSCRGDKTQPCGGFNSFDLYKLQTTSTVLCSGTPVEAYEQCGGKDWTGSTCCMDGYDCTQMVEDGCYAQCRPSVTVEPITPSP 552
BLAST of mRNA_L-elsbetiae_contig7713.16657.1 vs. uniprot
Match: A0A6H5KHF5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHF5_9PHAE) HSP 1 Score: 147 bits (371), Expect = 3.430e-42 Identity = 74/160 (46.25%), Postives = 95/160 (59.38%), Query Frame = 1 Query: 4 EYLGCHHDRKNDRVLGDMFNSPDMTLAVCLEYCTSKGALFMAVQFGFECWCSDDDDLEYERHFERDGEDAVCDMSCLGDETVTCGGYNSFDLYKLSTCSGNPV---------------------EAYEQCGGLDWEGSTCCFDGYECTEMGADGCYSQCR 420 EY+GC+ DR++DRVLGD +S MT C EYC+ GA +MA Q+ FEC+CS D+DL+YERH A+C+M CLGDE TCGG N+FDLYK+ +P EA+ QC G +WEGSTCC +GY+C + YSQ R Sbjct: 22 EYVGCYTDRQDDRVLGDKLDSDLMTADFCYEYCSEMGAAYMATQYAFECFCSADEDLDYERHGT-----AMCNMGCLGDEGETCGGENAFDLYKIMPSMNSPTPATPFSEPEPEPTTPLSDGCAEAWGQCDGGNWEGSTCCVEGYKCVPD--NDWYSQVR 174
BLAST of mRNA_L-elsbetiae_contig7713.16657.1 vs. uniprot
Match: D8LMS9_ECTSI (EsV-1-166 n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LMS9_ECTSI) HSP 1 Score: 152 bits (385), Expect = 3.160e-41 Identity = 75/161 (46.58%), Postives = 97/161 (60.25%), Query Frame = 1 Query: 4 EYLGCHHDRKNDRVLGDMFNSPDMTLAVCLEYCTSKGALFMAVQFGFECWCSDDDDLEYERHFERDGEDAVCDMSCLGDETVTCGGYNSFDLYKLSTCSGNPV---------------------EAYEQCGGLDWEGSTCCFDGYECTEMGADGCYSQCRP 423 EY+GC+ DR++DR+LGD +S MT C EYC+ GA +MA Q+ FEC+CS D+DL+YERH A+CD +C GDE TCGG N+FDLY++ P EA+ QCGG +WEGSTCC +GYEC + + YSQCRP Sbjct: 335 EYVGCYTDRQDDRILGDKLDSDLMTADFCYEYCSEIGAAYMATQYAFECFCSADEDLDYERHGT-----AMCDKACRGDEGETCGGENAFDLYRIMPSMDLPTPATPFSEPEPEPTTPVSDGCAEAWGQCGGGNWEGSTCCMEGYEC--VANNDWYSQCRP 488
BLAST of mRNA_L-elsbetiae_contig7713.16657.1 vs. uniprot
Match: A0A6H5JMV6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMV6_9PHAE) HSP 1 Score: 116 bits (291), Expect = 9.190e-28 Identity = 56/114 (49.12%), Postives = 70/114 (61.40%), Query Frame = 1 Query: 7 YLGCHHDRKNDRVLGDMFNSPDMTLAVCLEYCTSKGALFMAVQFGFECWCSDDDDLEYERHFERDGEDAVCDMSCLGDETVTCGGYNSFDLYKLSTCSGNPVEAYEQCGGLDWE 348 Y+GC D K+DRV M SP MT AVCLEYC + A FMA QFG ECWCS D ++EY+RH D VCD C G+ T CGG+++FDLYK++ + + Y C D E Sbjct: 13 YVGCFADSKDDRVFEYMKTSPTMTTAVCLEYCLDRRATFMATQFGIECWCSVDAEIEYDRH-----SDGVCDCECGGEATDICGGFDAFDLYKITEPTEPTGDEYVGCFADDRE 121
BLAST of mRNA_L-elsbetiae_contig7713.16657.1 vs. uniprot
Match: D7FXK6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXK6_ECTSI) HSP 1 Score: 112 bits (281), Expect = 3.780e-26 Identity = 54/116 (46.55%), Postives = 71/116 (61.21%), Query Frame = 1 Query: 4 EYLGCHHDRKNDRVLGDMFNSPDMTLAVCLEYCTSKGALFMAVQFGFECWCSDDDDLEYERHFERDGEDA-VCDMSCLGDETVTCGGYNSFDLYKLSTCSGNPVEAYEQCGGLDWE 348 E++GC D K DRVLG + SP MT A+C E+C + A +MA+Q+G+ECWCS +L+Y RH D DA +CD+SC G + TCGG +FDLYKL + Y C D E Sbjct: 315 EHIGCFADNKTDRVLGHLMKSPLMTSAMCAEHCFGRRATYMALQYGYECWCSRYTELDYSRHSGTDKGDADLCDLSCYGCDAETCGGLYAFDLYKLDGPMPSDSREYVGCFADDQE 430
BLAST of mRNA_L-elsbetiae_contig7713.16657.1 vs. uniprot
Match: D8LED7_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED7_ECTSI) HSP 1 Score: 111 bits (277), Expect = 1.700e-25 Identity = 53/114 (46.49%), Postives = 69/114 (60.53%), Query Frame = 1 Query: 7 YLGCHHDRKNDRVLGDMFNSPDMTLAVCLEYCTSKGALFMAVQFGFECWCSDDDDLEYERHFERDGEDAVCDMSCLGDETVTCGGYNSFDLYKLSTCSGNPVEAYEQCGGLDWE 348 Y+GC D K DRV M S MT AVCLEYC + A +MA Q+G+ECWCS D ++EY+RH D VCD +C GD CGG+++FDLYK++ + + Y C D E Sbjct: 435 YVGCFADSKEDRVFEYMKTSSTMTTAVCLEYCLDRRATYMATQYGYECWCSVDAEVEYDRH-----SDGVCDHACGGDAADICGGFDAFDLYKITEPTEPTGDEYVGCFADDRE 543
BLAST of mRNA_L-elsbetiae_contig7713.16657.1 vs. uniprot
Match: D7FRE8_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRE8_ECTSI) HSP 1 Score: 110 bits (276), Expect = 2.420e-25 Identity = 60/139 (43.17%), Postives = 78/139 (56.12%), Query Frame = 1 Query: 4 EYLGCHHDRKNDRVLGDM-FNSPDMTLAVCLEYCTSKGALFMAVQFGFECWCSDDDDLEYERHFERDGEDAVCDMSCLGDETVTCGGYNSFDLYKLSTCSGNPVEAYEQCGGLDWEGSTCCFDGYECTEMGADGCYSQC 417 E++GC D ++DRVL S DMT +C E C++KGA +MA Q+G ECWCS D L+Y+RH G+ VCD C GDE+ TCGG +SF+LY+LS E Y C D +G D +M A C C Sbjct: 1146 EHVGCFQDSQSDRVLQRSGLISGDMTAELCYETCSTKGAAYMATQWGVECWCSRDGSLDYDRH----GDTGVCDYPCRGDESETCGGVHSFNLYRLSWAPAPEDEEYVGCY-TDNKGDRVLSDMISSDDMTAAVCREHC 1279
BLAST of mRNA_L-elsbetiae_contig7713.16657.1 vs. uniprot
Match: D8LJW7_ECTSI (Pathogenesis-related protein, class 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJW7_ECTSI) HSP 1 Score: 107 bits (266), Expect = 4.530e-25 Identity = 52/103 (50.49%), Postives = 66/103 (64.08%), Query Frame = 1 Query: 4 EYLGCHHDRKNDRVLGDMFNS-PDMTLAVCLEYCTSKGALFMAVQFGFECWCSDDDDLEYERHFERDGEDAVCDMSCLGDETVTCGGYNSFDLYKLSTCSGNP 309 EY+GC D + DR+L DM S DM+ C E+C GA +MA Q+ EC+CS++ DLEY+RH G A CDMSC G E TCGG ++FDLYKL + NP Sbjct: 57 EYIGCFTDSQEDRILDDMLTSRTDMSTEKCYEHCMEMGAEYMATQWAQECFCSNNKDLEYDRH----GSGAECDMSCTGVEGETCGGNHAFDLYKLGGSADNP 155
BLAST of mRNA_L-elsbetiae_contig7713.16657.1 vs. uniprot
Match: D8LED9_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED9_ECTSI) HSP 1 Score: 109 bits (273), Expect = 4.910e-25 Identity = 50/95 (52.63%), Postives = 63/95 (66.32%), Query Frame = 1 Query: 7 YLGCHHDRKNDRVLGDMFNSPDMTLAVCLEYCTSKGALFMAVQFGFECWCSDDDDLEYERHFERDGEDAVCDMSCLGDETVTCGGYNSFDLYKLS 291 Y+GC D K+DRV M S MT AVCLEYC + A +MA Q+G ECWCS D + EY+RH D VCD +C GDE CGG+++FDLYK++ Sbjct: 402 YVGCFADNKHDRVFEYMRTSFTMTTAVCLEYCLERRATYMATQYGIECWCSVDAETEYDRH-----SDGVCDHACGGDEADYCGGFDAFDLYKIT 491
BLAST of mRNA_L-elsbetiae_contig7713.16657.1 vs. uniprot
Match: A0A6H5K2N3_9PHAE (WSC domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2N3_9PHAE) HSP 1 Score: 102 bits (255), Expect = 6.850e-24 Identity = 44/96 (45.83%), Postives = 61/96 (63.54%), Query Frame = 1 Query: 7 YLGCHHDRKNDRVLGDMFNSPDMTLAVCLEYCTSKGALFMAVQFGFECWCSDDDDLEYERHFERDGEDAVCDMSCLGDETVTCGGYNSFDLYKLST 294 +LGC D+K+DRV+G ++ C +YC + A MA Q+G ECWC+ + DLEYERH E + +CD C GD+T CGGYN+FDLY + + Sbjct: 44 HLGCFVDKKSDRVMGHKIADEEVDTEFCYDYCLGENAPLMATQWGIECWCATEVDLEYERHGEAE---ELCDYKCGGDKTENCGGYNAFDLYVIES 136 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7713.16657.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7713.16657.1 >prot_L-elsbetiae_contig7713.16657.1 ID=prot_L-elsbetiae_contig7713.16657.1|Name=mRNA_L-elsbetiae_contig7713.16657.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=152bp AEYLGCHHDRKNDRVLGDMFNSPDMTLAVCLEYCTSKGALFMAVQFGFECback to top mRNA from alignment at L-elsbetiae_contig7713:317..2960+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7713.16657.1 ID=mRNA_L-elsbetiae_contig7713.16657.1|Name=mRNA_L-elsbetiae_contig7713.16657.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2644bp|location=Sequence derived from alignment at L-elsbetiae_contig7713:317..2960+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7713:317..2960+ >mRNA_L-elsbetiae_contig7713.16657.1 ID=mRNA_L-elsbetiae_contig7713.16657.1|Name=mRNA_L-elsbetiae_contig7713.16657.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=912bp|location=Sequence derived from alignment at L-elsbetiae_contig7713:317..2960+ (Laminarionema elsbetiae ELsaHSoW15)back to top |