mRNA_L-elsbetiae_contig771.16649.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig771.16649.1 vs. uniprot
Match: A0A8F0JWX3_9PHAE (Ribosomal protein S2 n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0JWX3_9PHAE) HSP 1 Score: 346 bits (887), Expect = 1.270e-118 Identity = 167/226 (73.89%), Postives = 200/226 (88.50%), Query Frame = 1 Query: 1 MNKIKVADLLTAGVHFGHKAHRWNPKMFPYIYKESHGIHIIDLIQTSKLLENACNFSQEAAKKKKTFLFVGTKKQIKSLIAKEAQNCGAYYINHRWLGGMLTNWVTIKSRIKRLKELENQKLNNVFEDLPKKEAAILKKELEKLQKYFNGVKDMEEIPDIIIIIDQKREITAIKEAISLKLPIISILDTNCDPNLVTIPIPGNDDSIKSIKYILQKLTESICLGSQ 678 M KI++A LL AGVH GHKAHRWNPKMFPYIY E +G+HI+DLIQT++ L+ AC+FS++AA+K +TFLFVGTKKQ SLIA EAQ CGA+Y+NHRWLGGMLTNWVTIK+RI RLK+LE Q+ NN F++LPKKE + LKKELEKL+KYFNGVK ME+IPDII+IIDQKREI AI+EA+SL++PIISILDTNCDP+L TIPIPGNDD+I SIKYI++ L +SICLG Q Sbjct: 1 MAKIELAQLLDAGVHLGHKAHRWNPKMFPYIYTERNGVHILDLIQTTEFLKRACDFSKKAAQKNQTFLFVGTKKQAASLIANEAQRCGAFYVNHRWLGGMLTNWVTIKNRIHRLKDLEEQEKNNFFKNLPKKEVSNLKKELEKLKKYFNGVKGMEKIPDIIVIIDQKREIIAIQEALSLEIPIISILDTNCDPSLTTIPIPGNDDAISSIKYIIKNLVDSICLGQQ 226
BLAST of mRNA_L-elsbetiae_contig771.16649.1 vs. uniprot
Match: A0A1I9LVT4_9PHAE (30S ribosomal protein S2, chloroplastic n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LVT4_9PHAE) HSP 1 Score: 344 bits (883), Expect = 5.550e-118 Identity = 169/226 (74.78%), Postives = 196/226 (86.73%), Query Frame = 1 Query: 1 MNKIKVADLLTAGVHFGHKAHRWNPKMFPYIYKESHGIHIIDLIQTSKLLENACNFSQEAAKKKKTFLFVGTKKQIKSLIAKEAQNCGAYYINHRWLGGMLTNWVTIKSRIKRLKELENQKLNNVFEDLPKKEAAILKKELEKLQKYFNGVKDMEEIPDIIIIIDQKREITAIKEAISLKLPIISILDTNCDPNLVTIPIPGNDDSIKSIKYILQKLTESICLGSQ 678 M KI++A LL AGVHFGHKAHRWNPKMFPYIY E +GIHI+DLIQT + L+ AC+FS+ A++KK+TFLFVGTKKQ SLIA EAQ CGA+YINHRWLGGMLTNW+TIKSRI RL LE Q+ N F LPKKEAA LKKELEKL+KYFNGVK M+ +PDI++IIDQKREI AIKEA+SL +PIISILDTNCDP+L T+PIPGNDDSI+SIKYI+Q +T+SICLG Q Sbjct: 1 MAKIELAQLLDAGVHFGHKAHRWNPKMFPYIYAERNGIHILDLIQTMEFLKRACDFSKRASEKKQTFLFVGTKKQSASLIAIEAQKCGAFYINHRWLGGMLTNWITIKSRIDRLNHLEEQEKINSFNSLPKKEAANLKKELEKLKKYFNGVKGMKTLPDILVIIDQKREIIAIKEALSLNIPIISILDTNCDPDLATLPIPGNDDSIRSIKYIIQNITDSICLGQQ 226
BLAST of mRNA_L-elsbetiae_contig771.16649.1 vs. uniprot
Match: A0A8F0K065_9PHAE (Ribosomal protein S2 n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0K065_9PHAE) HSP 1 Score: 336 bits (862), Expect = 9.360e-115 Identity = 167/226 (73.89%), Postives = 198/226 (87.61%), Query Frame = 1 Query: 1 MNKIKVADLLTAGVHFGHKAHRWNPKMFPYIYKESHGIHIIDLIQTSKLLENACNFSQEAAKKKKTFLFVGTKKQIKSLIAKEAQNCGAYYINHRWLGGMLTNWVTIKSRIKRLKELENQKLNNVFEDLPKKEAAILKKELEKLQKYFNGVKDMEEIPDIIIIIDQKREITAIKEAISLKLPIISILDTNCDPNLVTIPIPGNDDSIKSIKYILQKLTESICLGSQ 678 M KI++A LL AGVHFGHKA+RWNPKMFPYIY E +GIHI+DLIQT++ L+ AC+FS++AA+K +TFLFVGTKKQ SLIA EA NCGA+YINHRWLGGMLTNWVTIKSRI RL LE+Q+ N+F +LPKKEA+ LKKELEKL+KYFNGVK M++IPDII+IIDQKREI AI+EA+SL +PIISILDTNCDPNL TIPIPGNDDSI+SIKYI+Q + +SI G + Sbjct: 1 MAKIELAQLLDAGVHFGHKANRWNPKMFPYIYAERNGIHILDLIQTTEFLKRACDFSKKAARKNQTFLFVGTKKQTASLIANEATNCGAFYINHRWLGGMLTNWVTIKSRIDRLNYLEDQEKLNLFVNLPKKEASDLKKELEKLKKYFNGVKAMKQIPDIIVIIDQKREIIAIQEALSLDIPIISILDTNCDPNLATIPIPGNDDSIRSIKYIIQNIADSIRSGQK 226
BLAST of mRNA_L-elsbetiae_contig771.16649.1 vs. uniprot
Match: A0A7S6U9Z1_9STRA (30S ribosomal protein S2, chloroplastic n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6U9Z1_9STRA) HSP 1 Score: 333 bits (854), Expect = 1.490e-113 Identity = 162/224 (72.32%), Postives = 193/224 (86.16%), Query Frame = 1 Query: 1 MNKIKVADLLTAGVHFGHKAHRWNPKMFPYIYKESHGIHIIDLIQTSKLLENACNFSQEAAKKKKTFLFVGTKKQIKSLIAKEAQNCGAYYINHRWLGGMLTNWVTIKSRIKRLKELENQKLNNVFEDLPKKEAAILKKELEKLQKYFNGVKDMEEIPDIIIIIDQKREITAIKEAISLKLPIISILDTNCDPNLVTIPIPGNDDSIKSIKYILQKLTESICLG 672 M KIK+A LL AGVHFGHKA+RWNPKMFPYIY E +G+HI+DLIQT++LL+ AC+F + AAK+ KTFLFVGTKKQ S+IA EA CGA Y+NHRWLGGMLTNWVT+KSRI+RLK LE Q N FE+LPKKE A L+KELE+L+KYFNGVK M++ PDII IIDQKREITA+KEA SL +PII++LDTNC+P+L TIPIPGNDD+I+SI+YI QKL +SICLG Sbjct: 1 MAKIKLAQLLKAGVHFGHKAYRWNPKMFPYIYTERNGVHILDLIQTAELLKRACDFCEIAAKQNKTFLFVGTKKQASSIIASEATRCGANYVNHRWLGGMLTNWVTLKSRIERLKNLEKQDSENSFENLPKKEVAKLRKELERLRKYFNGVKQMQQRPDIIFIIDQKREITAVKEARSLNIPIITLLDTNCNPDLTTIPIPGNDDAIRSIRYITQKLADSICLG 224
BLAST of mRNA_L-elsbetiae_contig771.16649.1 vs. uniprot
Match: D1GJH5_FUCVE (30S ribosomal protein S2, chloroplastic n=41 Tax=Phaeophyceae TaxID=2870 RepID=D1GJH5_FUCVE) HSP 1 Score: 333 bits (853), Expect = 2.050e-113 Identity = 160/226 (70.80%), Postives = 196/226 (86.73%), Query Frame = 1 Query: 1 MNKIKVADLLTAGVHFGHKAHRWNPKMFPYIYKESHGIHIIDLIQTSKLLENACNFSQEAAKKKKTFLFVGTKKQIKSLIAKEAQNCGAYYINHRWLGGMLTNWVTIKSRIKRLKELENQKLNNVFEDLPKKEAAILKKELEKLQKYFNGVKDMEEIPDIIIIIDQKREITAIKEAISLKLPIISILDTNCDPNLVTIPIPGNDDSIKSIKYILQKLTESICLGSQ 678 M KI++A LL AGVHFGHKA RWNPKMFPYIY E +GIHI+DLIQT++ L+ AC+FS++A+ K +TFLFVGTKK+ SLIA EAQ CGA+YINHRWLGG LTNW+TIK RI+RL LE Q+ F++LPKKEA+ LKKELEKL+KYFNG+K M++IPDI++IIDQKREI AI+EA+SL +PIISI+DTNCDPNL TIPIPGNDDSI+SIKYI++ +++SICLG Q Sbjct: 1 MAKIELAQLLEAGVHFGHKAQRWNPKMFPYIYAERNGIHILDLIQTTEFLKRACDFSKKASAKNQTFLFVGTKKRASSLIASEAQKCGAFYINHRWLGGTLTNWITIKGRIQRLNNLEEQEKLTSFKNLPKKEASNLKKELEKLKKYFNGIKGMKKIPDILVIIDQKREIIAIQEALSLNIPIISIIDTNCDPNLATIPIPGNDDSIRSIKYIIKNISDSICLGQQ 226
BLAST of mRNA_L-elsbetiae_contig771.16649.1 vs. uniprot
Match: A0A141BSD4_9PHAE (30S ribosomal protein S2, chloroplastic n=12 Tax=Sargassaceae TaxID=3014 RepID=A0A141BSD4_9PHAE) HSP 1 Score: 333 bits (853), Expect = 2.050e-113 Identity = 162/230 (70.43%), Postives = 195/230 (84.78%), Query Frame = 1 Query: 1 MNKIKVADLLTAGVHFGHKAHRWNPKMFPYIYKESHGIHIIDLIQTSKLLENACNFSQEAAKKKKTFLFVGTKKQIKSLIAKEAQNCGAYYINHRWLGGMLTNWVTIKSRIKRLKELENQKLNNVFEDLPKKEAAILKKELEKLQKYFNGVKDMEEIPDIIIIIDQKREITAIKEAISLKLPIISILDTNCDPNLVTIPIPGNDDSIKSIKYILQKLTESICLGSQMIKK 690 M KI++A LL AGVHFGHKA RWNPKMFPYIY E +GIHI+DLIQT++ L+ AC+FS++A+ K +TFLFVGTK+ SL+A EAQ CGA+YINHRWLGG LTNWVTIK RI+RL LE Q+ F++LPKKEA+ LKKELEKL+KYFNGVK M+++PDI+IIIDQKREI AI+EAISL +PIISI+DTNCDPNL TIPIPGNDDSI+SIKYI++ + +SICLG Q K Sbjct: 1 MAKIELAQLLEAGVHFGHKAQRWNPKMFPYIYAERNGIHILDLIQTTEFLKRACDFSKKASSKNQTFLFVGTKRHTASLVASEAQKCGAFYINHRWLGGTLTNWVTIKERIERLNNLEEQEKLTSFKNLPKKEASYLKKELEKLKKYFNGVKGMKKLPDILIIIDQKREIIAIQEAISLNIPIISIIDTNCDPNLATIPIPGNDDSIRSIKYIIKNIADSICLGQQSYLK 230
BLAST of mRNA_L-elsbetiae_contig771.16649.1 vs. uniprot
Match: A0A8E5XRD1_9PHAE (30S ribosomal protein S2, chloroplastic n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E5XRD1_9PHAE) HSP 1 Score: 319 bits (817), Expect = 6.160e-108 Identity = 157/230 (68.26%), Postives = 191/230 (83.04%), Query Frame = 1 Query: 1 MNKIKVADLLTAGVHFGHKAHRWNPKMFPYIYKESHGIHIIDLIQTSKLLENACNFSQEAAKKKKTFLFVGTKKQIKSLIAKEAQNCGAYYINHRWLGGMLTNWVTIKSRIKRLKELENQKLNNVFEDLPKKEAAILKKELEKLQKYFNGVKDMEEIPDIIIIIDQKREITAIKEAISLKLPIISILDTNCDPNLVTIPIPGNDDSIKSIKYILQKLTESICLGSQMIKK 690 M KI++A LL AGVHFGHKA RWNPKMFP+IY E +GIHI+DLIQT++LL+ AC+FS + AK KTFLF+GTK+Q ++IA +Q CGA+Y+NHRWLGGMLTNW TIK RI+RLKELE Q+ + F PKKEAA LK EL KLQK+FNGVK+MEE+PD++IIIDQKREITA+KEA SL +PII+ILDTNCDP+L T+ IP NDD++KSIKYI+ L +SICLG Q I K Sbjct: 1 MAKIELAQLLEAGVHFGHKAKRWNPKMFPHIYAERNGIHILDLIQTAQLLKVACDFSTKIAKNNKTFLFIGTKRQAAAVIAHASQRCGAFYVNHRWLGGMLTNWTTIKRRIERLKELEVQEKIDDFAAFPKKEAAGLKNELRKLQKHFNGVKEMEELPDVVIIIDQKREITAVKEAQSLNIPIITILDTNCDPSLTTLGIPANDDAVKSIKYIIDTLVDSICLGQQNILK 230
BLAST of mRNA_L-elsbetiae_contig771.16649.1 vs. uniprot
Match: A0A2U9NQ44_9STRA (30S ribosomal protein S2, chloroplastic n=1 Tax=Actinocyclus subtilis TaxID=1630683 RepID=A0A2U9NQ44_9STRA) HSP 1 Score: 311 bits (796), Expect = 9.020e-105 Identity = 150/229 (65.50%), Postives = 192/229 (83.84%), Query Frame = 1 Query: 1 MNKIKVADLLTAGVHFGHKAHRWNPKMFPYIYKESHGIHIIDLIQTSKLLENACNFSQEAAKKKKTFLFVGTKKQIKSLIAKEAQNCGAYYINHRWLGGMLTNWVTIKSRIKRLKELENQKLNNVFEDLPKKEAAILKKELEKLQKYFNGVKDMEEIPDIIIIIDQKREITAIKEAISLKLPIISILDTNCDPNLVTIPIPGNDDSIKSIKYILQKLTESICLGSQMIK 687 M ++ +A LL AGVHFGHKA+RWNPKMFPYIY E + IHI+DL+Q+ +LL+ A + + AA++KKTFLF+GTK+Q SLIA+EA+ C +YY+NHRWLGGMLTNWVT+KSRI RLKELE Q+ N +F+ LPKKEAA+ K ELEKL+K+ NGVK+M+++PD+ IIIDQKREI+AI+E L +PIISILDTNCDP+LV IPIPGNDD+++SIK IL+ LT+SI LG I+ Sbjct: 1 MAELNLAQLLQAGVHFGHKAYRWNPKMFPYIYTERNNIHILDLVQSVQLLKEASLYLESAAEQKKTFLFIGTKRQASSLIAQEAKRCNSYYVNHRWLGGMLTNWVTLKSRIVRLKELEQQEANQIFDILPKKEAALRKTELEKLRKHLNGVKNMDKLPDVAIIIDQKREISAIRECRKLNIPIISILDTNCDPDLVDIPIPGNDDAVRSIKLILKSLTDSINLGKSKIE 229
BLAST of mRNA_L-elsbetiae_contig771.16649.1 vs. uniprot
Match: A0A2I4Q2U3_9PHAE (30S ribosomal protein S2, chloroplastic n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q2U3_9PHAE) HSP 1 Score: 310 bits (794), Expect = 1.950e-104 Identity = 151/230 (65.65%), Postives = 187/230 (81.30%), Query Frame = 1 Query: 1 MNKIKVADLLTAGVHFGHKAHRWNPKMFPYIYKESHGIHIIDLIQTSKLLENACNFSQEAAKKKKTFLFVGTKKQIKSLIAKEAQNCGAYYINHRWLGGMLTNWVTIKSRIKRLKELENQKLNNVFEDLPKKEAAILKKELEKLQKYFNGVKDMEEIPDIIIIIDQKREITAIKEAISLKLPIISILDTNCDPNLVTIPIPGNDDSIKSIKYILQKLTESICLGSQMIKK 690 M KI++A LL AGVH GHKA+RWNPKMFPYIY E + +HIIDLIQT K L AC FS+ AA+ +TFLF+GT K LI E++ CGA+YINHRWLGGMLTNW TIK+RI+RLK LE Q+ F+++PKKEAA LKKELEKL+KYF+GVK+M+++PD IIIIDQ+ +I A+KEA+SL + +ISILDTNCDP+L TIPIPGNDDSIKS+KY++ L +SICLG + KK Sbjct: 1 MKKIELAHLLDAGVHLGHKANRWNPKMFPYIYTERNQVHIIDLIQTIKFLRLACTFSENAARNNETFLFIGTNKYTAPLITAESERCGAFYINHRWLGGMLTNWGTIKNRIERLKYLEEQERLTTFKNIPKKEAAKLKKELEKLKKYFSGVKEMKKLPDNIIIIDQRNDIIAVKEALSLNIQVISILDTNCDPDLATIPIPGNDDSIKSLKYLISSLVDSICLGHKTDKK 230
BLAST of mRNA_L-elsbetiae_contig771.16649.1 vs. uniprot
Match: B7T1S3_VAULI (30S ribosomal protein S2, chloroplastic n=1 Tax=Vaucheria litorea TaxID=109269 RepID=B7T1S3_VAULI) HSP 1 Score: 310 bits (793), Expect = 3.280e-104 Identity = 151/224 (67.41%), Postives = 188/224 (83.93%), Query Frame = 1 Query: 1 MNKIKVADLLTAGVHFGHKAHRWNPKMFPYIYKESHGIHIIDLIQTSKLLENACNFSQEAAKKKKTFLFVGTKKQIKSLIAKEAQNCGAYYINHRWLGGMLTNWVTIKSRIKRLKELENQKLNNVFEDLPKKEAAILKKELEKLQKYFNGVKDMEEIPDIIIIIDQKREITAIKEAISLKLPIISILDTNCDPNLVTIPIPGNDDSIKSIKYILQKLTESICLG 672 M K+++++LL AGVHFGHKAH WNPKM PYIY E G+HIIDLIQTS LL+ ACNF Q A++ K+FLFVGTK+Q +IAKEAQ CGA+Y+N+RWLGGMLTNW+T ++RI+RLK+LENQ+ ++LPKKEAA L KELE+L+KYF GVK M + PDII+IIDQK EI AIKEA++L PIISILDTNC+P+LVT+PIPGNDD+++SIKYI++KL ESI G Sbjct: 1 MVKVELSELLAAGVHFGHKAHHWNPKMSPYIYTEKDGVHIIDLIQTSVLLKQACNFVQTASQTGKSFLFVGTKRQAAPVIAKEAQRCGAHYVNYRWLGGMLTNWITFRTRIQRLKDLENQQQQGEIDNLPKKEAAKLTKELERLRKYFTGVKTMTKEPDIIVIIDQKIEIIAIKEALALNKPIISILDTNCNPDLVTLPIPGNDDAVQSIKYIIEKLAESISNG 224 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig771.16649.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig771.16649.1 >prot_L-elsbetiae_contig771.16649.1 ID=prot_L-elsbetiae_contig771.16649.1|Name=mRNA_L-elsbetiae_contig771.16649.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=231bp MNKIKVADLLTAGVHFGHKAHRWNPKMFPYIYKESHGIHIIDLIQTSKLLback to top mRNA from alignment at L-elsbetiae_contig771:12322..13014- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig771.16649.1 ID=mRNA_L-elsbetiae_contig771.16649.1|Name=mRNA_L-elsbetiae_contig771.16649.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=693bp|location=Sequence derived from alignment at L-elsbetiae_contig771:12322..13014- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig771:12322..13014- >mRNA_L-elsbetiae_contig771.16649.1 ID=mRNA_L-elsbetiae_contig771.16649.1|Name=mRNA_L-elsbetiae_contig771.16649.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1386bp|location=Sequence derived from alignment at L-elsbetiae_contig771:12322..13014- (Laminarionema elsbetiae ELsaHSoW15)back to top |