mRNA_L-elsbetiae_contig771.16649.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig771.16649.1
Unique NamemRNA_L-elsbetiae_contig771.16649.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig771.16649.1 vs. uniprot
Match: A0A8F0JWX3_9PHAE (Ribosomal protein S2 n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0JWX3_9PHAE)

HSP 1 Score: 346 bits (887), Expect = 1.270e-118
Identity = 167/226 (73.89%), Postives = 200/226 (88.50%), Query Frame = 1
Query:    1 MNKIKVADLLTAGVHFGHKAHRWNPKMFPYIYKESHGIHIIDLIQTSKLLENACNFSQEAAKKKKTFLFVGTKKQIKSLIAKEAQNCGAYYINHRWLGGMLTNWVTIKSRIKRLKELENQKLNNVFEDLPKKEAAILKKELEKLQKYFNGVKDMEEIPDIIIIIDQKREITAIKEAISLKLPIISILDTNCDPNLVTIPIPGNDDSIKSIKYILQKLTESICLGSQ 678
            M KI++A LL AGVH GHKAHRWNPKMFPYIY E +G+HI+DLIQT++ L+ AC+FS++AA+K +TFLFVGTKKQ  SLIA EAQ CGA+Y+NHRWLGGMLTNWVTIK+RI RLK+LE Q+ NN F++LPKKE + LKKELEKL+KYFNGVK ME+IPDII+IIDQKREI AI+EA+SL++PIISILDTNCDP+L TIPIPGNDD+I SIKYI++ L +SICLG Q
Sbjct:    1 MAKIELAQLLDAGVHLGHKAHRWNPKMFPYIYTERNGVHILDLIQTTEFLKRACDFSKKAAQKNQTFLFVGTKKQAASLIANEAQRCGAFYVNHRWLGGMLTNWVTIKNRIHRLKDLEEQEKNNFFKNLPKKEVSNLKKELEKLKKYFNGVKGMEKIPDIIVIIDQKREIIAIQEALSLEIPIISILDTNCDPSLTTIPIPGNDDAISSIKYIIKNLVDSICLGQQ 226          
BLAST of mRNA_L-elsbetiae_contig771.16649.1 vs. uniprot
Match: A0A1I9LVT4_9PHAE (30S ribosomal protein S2, chloroplastic n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LVT4_9PHAE)

HSP 1 Score: 344 bits (883), Expect = 5.550e-118
Identity = 169/226 (74.78%), Postives = 196/226 (86.73%), Query Frame = 1
Query:    1 MNKIKVADLLTAGVHFGHKAHRWNPKMFPYIYKESHGIHIIDLIQTSKLLENACNFSQEAAKKKKTFLFVGTKKQIKSLIAKEAQNCGAYYINHRWLGGMLTNWVTIKSRIKRLKELENQKLNNVFEDLPKKEAAILKKELEKLQKYFNGVKDMEEIPDIIIIIDQKREITAIKEAISLKLPIISILDTNCDPNLVTIPIPGNDDSIKSIKYILQKLTESICLGSQ 678
            M KI++A LL AGVHFGHKAHRWNPKMFPYIY E +GIHI+DLIQT + L+ AC+FS+ A++KK+TFLFVGTKKQ  SLIA EAQ CGA+YINHRWLGGMLTNW+TIKSRI RL  LE Q+  N F  LPKKEAA LKKELEKL+KYFNGVK M+ +PDI++IIDQKREI AIKEA+SL +PIISILDTNCDP+L T+PIPGNDDSI+SIKYI+Q +T+SICLG Q
Sbjct:    1 MAKIELAQLLDAGVHFGHKAHRWNPKMFPYIYAERNGIHILDLIQTMEFLKRACDFSKRASEKKQTFLFVGTKKQSASLIAIEAQKCGAFYINHRWLGGMLTNWITIKSRIDRLNHLEEQEKINSFNSLPKKEAANLKKELEKLKKYFNGVKGMKTLPDILVIIDQKREIIAIKEALSLNIPIISILDTNCDPDLATLPIPGNDDSIRSIKYIIQNITDSICLGQQ 226          
BLAST of mRNA_L-elsbetiae_contig771.16649.1 vs. uniprot
Match: A0A8F0K065_9PHAE (Ribosomal protein S2 n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0K065_9PHAE)

HSP 1 Score: 336 bits (862), Expect = 9.360e-115
Identity = 167/226 (73.89%), Postives = 198/226 (87.61%), Query Frame = 1
Query:    1 MNKIKVADLLTAGVHFGHKAHRWNPKMFPYIYKESHGIHIIDLIQTSKLLENACNFSQEAAKKKKTFLFVGTKKQIKSLIAKEAQNCGAYYINHRWLGGMLTNWVTIKSRIKRLKELENQKLNNVFEDLPKKEAAILKKELEKLQKYFNGVKDMEEIPDIIIIIDQKREITAIKEAISLKLPIISILDTNCDPNLVTIPIPGNDDSIKSIKYILQKLTESICLGSQ 678
            M KI++A LL AGVHFGHKA+RWNPKMFPYIY E +GIHI+DLIQT++ L+ AC+FS++AA+K +TFLFVGTKKQ  SLIA EA NCGA+YINHRWLGGMLTNWVTIKSRI RL  LE+Q+  N+F +LPKKEA+ LKKELEKL+KYFNGVK M++IPDII+IIDQKREI AI+EA+SL +PIISILDTNCDPNL TIPIPGNDDSI+SIKYI+Q + +SI  G +
Sbjct:    1 MAKIELAQLLDAGVHFGHKANRWNPKMFPYIYAERNGIHILDLIQTTEFLKRACDFSKKAARKNQTFLFVGTKKQTASLIANEATNCGAFYINHRWLGGMLTNWVTIKSRIDRLNYLEDQEKLNLFVNLPKKEASDLKKELEKLKKYFNGVKAMKQIPDIIVIIDQKREIIAIQEALSLDIPIISILDTNCDPNLATIPIPGNDDSIRSIKYIIQNIADSIRSGQK 226          
BLAST of mRNA_L-elsbetiae_contig771.16649.1 vs. uniprot
Match: A0A7S6U9Z1_9STRA (30S ribosomal protein S2, chloroplastic n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6U9Z1_9STRA)

HSP 1 Score: 333 bits (854), Expect = 1.490e-113
Identity = 162/224 (72.32%), Postives = 193/224 (86.16%), Query Frame = 1
Query:    1 MNKIKVADLLTAGVHFGHKAHRWNPKMFPYIYKESHGIHIIDLIQTSKLLENACNFSQEAAKKKKTFLFVGTKKQIKSLIAKEAQNCGAYYINHRWLGGMLTNWVTIKSRIKRLKELENQKLNNVFEDLPKKEAAILKKELEKLQKYFNGVKDMEEIPDIIIIIDQKREITAIKEAISLKLPIISILDTNCDPNLVTIPIPGNDDSIKSIKYILQKLTESICLG 672
            M KIK+A LL AGVHFGHKA+RWNPKMFPYIY E +G+HI+DLIQT++LL+ AC+F + AAK+ KTFLFVGTKKQ  S+IA EA  CGA Y+NHRWLGGMLTNWVT+KSRI+RLK LE Q   N FE+LPKKE A L+KELE+L+KYFNGVK M++ PDII IIDQKREITA+KEA SL +PII++LDTNC+P+L TIPIPGNDD+I+SI+YI QKL +SICLG
Sbjct:    1 MAKIKLAQLLKAGVHFGHKAYRWNPKMFPYIYTERNGVHILDLIQTAELLKRACDFCEIAAKQNKTFLFVGTKKQASSIIASEATRCGANYVNHRWLGGMLTNWVTLKSRIERLKNLEKQDSENSFENLPKKEVAKLRKELERLRKYFNGVKQMQQRPDIIFIIDQKREITAVKEARSLNIPIITLLDTNCNPDLTTIPIPGNDDAIRSIRYITQKLADSICLG 224          
BLAST of mRNA_L-elsbetiae_contig771.16649.1 vs. uniprot
Match: D1GJH5_FUCVE (30S ribosomal protein S2, chloroplastic n=41 Tax=Phaeophyceae TaxID=2870 RepID=D1GJH5_FUCVE)

HSP 1 Score: 333 bits (853), Expect = 2.050e-113
Identity = 160/226 (70.80%), Postives = 196/226 (86.73%), Query Frame = 1
Query:    1 MNKIKVADLLTAGVHFGHKAHRWNPKMFPYIYKESHGIHIIDLIQTSKLLENACNFSQEAAKKKKTFLFVGTKKQIKSLIAKEAQNCGAYYINHRWLGGMLTNWVTIKSRIKRLKELENQKLNNVFEDLPKKEAAILKKELEKLQKYFNGVKDMEEIPDIIIIIDQKREITAIKEAISLKLPIISILDTNCDPNLVTIPIPGNDDSIKSIKYILQKLTESICLGSQ 678
            M KI++A LL AGVHFGHKA RWNPKMFPYIY E +GIHI+DLIQT++ L+ AC+FS++A+ K +TFLFVGTKK+  SLIA EAQ CGA+YINHRWLGG LTNW+TIK RI+RL  LE Q+    F++LPKKEA+ LKKELEKL+KYFNG+K M++IPDI++IIDQKREI AI+EA+SL +PIISI+DTNCDPNL TIPIPGNDDSI+SIKYI++ +++SICLG Q
Sbjct:    1 MAKIELAQLLEAGVHFGHKAQRWNPKMFPYIYAERNGIHILDLIQTTEFLKRACDFSKKASAKNQTFLFVGTKKRASSLIASEAQKCGAFYINHRWLGGTLTNWITIKGRIQRLNNLEEQEKLTSFKNLPKKEASNLKKELEKLKKYFNGIKGMKKIPDILVIIDQKREIIAIQEALSLNIPIISIIDTNCDPNLATIPIPGNDDSIRSIKYIIKNISDSICLGQQ 226          
BLAST of mRNA_L-elsbetiae_contig771.16649.1 vs. uniprot
Match: A0A141BSD4_9PHAE (30S ribosomal protein S2, chloroplastic n=12 Tax=Sargassaceae TaxID=3014 RepID=A0A141BSD4_9PHAE)

HSP 1 Score: 333 bits (853), Expect = 2.050e-113
Identity = 162/230 (70.43%), Postives = 195/230 (84.78%), Query Frame = 1
Query:    1 MNKIKVADLLTAGVHFGHKAHRWNPKMFPYIYKESHGIHIIDLIQTSKLLENACNFSQEAAKKKKTFLFVGTKKQIKSLIAKEAQNCGAYYINHRWLGGMLTNWVTIKSRIKRLKELENQKLNNVFEDLPKKEAAILKKELEKLQKYFNGVKDMEEIPDIIIIIDQKREITAIKEAISLKLPIISILDTNCDPNLVTIPIPGNDDSIKSIKYILQKLTESICLGSQMIKK 690
            M KI++A LL AGVHFGHKA RWNPKMFPYIY E +GIHI+DLIQT++ L+ AC+FS++A+ K +TFLFVGTK+   SL+A EAQ CGA+YINHRWLGG LTNWVTIK RI+RL  LE Q+    F++LPKKEA+ LKKELEKL+KYFNGVK M+++PDI+IIIDQKREI AI+EAISL +PIISI+DTNCDPNL TIPIPGNDDSI+SIKYI++ + +SICLG Q   K
Sbjct:    1 MAKIELAQLLEAGVHFGHKAQRWNPKMFPYIYAERNGIHILDLIQTTEFLKRACDFSKKASSKNQTFLFVGTKRHTASLVASEAQKCGAFYINHRWLGGTLTNWVTIKERIERLNNLEEQEKLTSFKNLPKKEASYLKKELEKLKKYFNGVKGMKKLPDILIIIDQKREIIAIQEAISLNIPIISIIDTNCDPNLATIPIPGNDDSIRSIKYIIKNIADSICLGQQSYLK 230          
BLAST of mRNA_L-elsbetiae_contig771.16649.1 vs. uniprot
Match: A0A8E5XRD1_9PHAE (30S ribosomal protein S2, chloroplastic n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E5XRD1_9PHAE)

HSP 1 Score: 319 bits (817), Expect = 6.160e-108
Identity = 157/230 (68.26%), Postives = 191/230 (83.04%), Query Frame = 1
Query:    1 MNKIKVADLLTAGVHFGHKAHRWNPKMFPYIYKESHGIHIIDLIQTSKLLENACNFSQEAAKKKKTFLFVGTKKQIKSLIAKEAQNCGAYYINHRWLGGMLTNWVTIKSRIKRLKELENQKLNNVFEDLPKKEAAILKKELEKLQKYFNGVKDMEEIPDIIIIIDQKREITAIKEAISLKLPIISILDTNCDPNLVTIPIPGNDDSIKSIKYILQKLTESICLGSQMIKK 690
            M KI++A LL AGVHFGHKA RWNPKMFP+IY E +GIHI+DLIQT++LL+ AC+FS + AK  KTFLF+GTK+Q  ++IA  +Q CGA+Y+NHRWLGGMLTNW TIK RI+RLKELE Q+  + F   PKKEAA LK EL KLQK+FNGVK+MEE+PD++IIIDQKREITA+KEA SL +PII+ILDTNCDP+L T+ IP NDD++KSIKYI+  L +SICLG Q I K
Sbjct:    1 MAKIELAQLLEAGVHFGHKAKRWNPKMFPHIYAERNGIHILDLIQTAQLLKVACDFSTKIAKNNKTFLFIGTKRQAAAVIAHASQRCGAFYVNHRWLGGMLTNWTTIKRRIERLKELEVQEKIDDFAAFPKKEAAGLKNELRKLQKHFNGVKEMEELPDVVIIIDQKREITAVKEAQSLNIPIITILDTNCDPSLTTLGIPANDDAVKSIKYIIDTLVDSICLGQQNILK 230          
BLAST of mRNA_L-elsbetiae_contig771.16649.1 vs. uniprot
Match: A0A2U9NQ44_9STRA (30S ribosomal protein S2, chloroplastic n=1 Tax=Actinocyclus subtilis TaxID=1630683 RepID=A0A2U9NQ44_9STRA)

HSP 1 Score: 311 bits (796), Expect = 9.020e-105
Identity = 150/229 (65.50%), Postives = 192/229 (83.84%), Query Frame = 1
Query:    1 MNKIKVADLLTAGVHFGHKAHRWNPKMFPYIYKESHGIHIIDLIQTSKLLENACNFSQEAAKKKKTFLFVGTKKQIKSLIAKEAQNCGAYYINHRWLGGMLTNWVTIKSRIKRLKELENQKLNNVFEDLPKKEAAILKKELEKLQKYFNGVKDMEEIPDIIIIIDQKREITAIKEAISLKLPIISILDTNCDPNLVTIPIPGNDDSIKSIKYILQKLTESICLGSQMIK 687
            M ++ +A LL AGVHFGHKA+RWNPKMFPYIY E + IHI+DL+Q+ +LL+ A  + + AA++KKTFLF+GTK+Q  SLIA+EA+ C +YY+NHRWLGGMLTNWVT+KSRI RLKELE Q+ N +F+ LPKKEAA+ K ELEKL+K+ NGVK+M+++PD+ IIIDQKREI+AI+E   L +PIISILDTNCDP+LV IPIPGNDD+++SIK IL+ LT+SI LG   I+
Sbjct:    1 MAELNLAQLLQAGVHFGHKAYRWNPKMFPYIYTERNNIHILDLVQSVQLLKEASLYLESAAEQKKTFLFIGTKRQASSLIAQEAKRCNSYYVNHRWLGGMLTNWVTLKSRIVRLKELEQQEANQIFDILPKKEAALRKTELEKLRKHLNGVKNMDKLPDVAIIIDQKREISAIRECRKLNIPIISILDTNCDPDLVDIPIPGNDDAVRSIKLILKSLTDSINLGKSKIE 229          
BLAST of mRNA_L-elsbetiae_contig771.16649.1 vs. uniprot
Match: A0A2I4Q2U3_9PHAE (30S ribosomal protein S2, chloroplastic n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q2U3_9PHAE)

HSP 1 Score: 310 bits (794), Expect = 1.950e-104
Identity = 151/230 (65.65%), Postives = 187/230 (81.30%), Query Frame = 1
Query:    1 MNKIKVADLLTAGVHFGHKAHRWNPKMFPYIYKESHGIHIIDLIQTSKLLENACNFSQEAAKKKKTFLFVGTKKQIKSLIAKEAQNCGAYYINHRWLGGMLTNWVTIKSRIKRLKELENQKLNNVFEDLPKKEAAILKKELEKLQKYFNGVKDMEEIPDIIIIIDQKREITAIKEAISLKLPIISILDTNCDPNLVTIPIPGNDDSIKSIKYILQKLTESICLGSQMIKK 690
            M KI++A LL AGVH GHKA+RWNPKMFPYIY E + +HIIDLIQT K L  AC FS+ AA+  +TFLF+GT K    LI  E++ CGA+YINHRWLGGMLTNW TIK+RI+RLK LE Q+    F+++PKKEAA LKKELEKL+KYF+GVK+M+++PD IIIIDQ+ +I A+KEA+SL + +ISILDTNCDP+L TIPIPGNDDSIKS+KY++  L +SICLG +  KK
Sbjct:    1 MKKIELAHLLDAGVHLGHKANRWNPKMFPYIYTERNQVHIIDLIQTIKFLRLACTFSENAARNNETFLFIGTNKYTAPLITAESERCGAFYINHRWLGGMLTNWGTIKNRIERLKYLEEQERLTTFKNIPKKEAAKLKKELEKLKKYFSGVKEMKKLPDNIIIIDQRNDIIAVKEALSLNIQVISILDTNCDPDLATIPIPGNDDSIKSLKYLISSLVDSICLGHKTDKK 230          
BLAST of mRNA_L-elsbetiae_contig771.16649.1 vs. uniprot
Match: B7T1S3_VAULI (30S ribosomal protein S2, chloroplastic n=1 Tax=Vaucheria litorea TaxID=109269 RepID=B7T1S3_VAULI)

HSP 1 Score: 310 bits (793), Expect = 3.280e-104
Identity = 151/224 (67.41%), Postives = 188/224 (83.93%), Query Frame = 1
Query:    1 MNKIKVADLLTAGVHFGHKAHRWNPKMFPYIYKESHGIHIIDLIQTSKLLENACNFSQEAAKKKKTFLFVGTKKQIKSLIAKEAQNCGAYYINHRWLGGMLTNWVTIKSRIKRLKELENQKLNNVFEDLPKKEAAILKKELEKLQKYFNGVKDMEEIPDIIIIIDQKREITAIKEAISLKLPIISILDTNCDPNLVTIPIPGNDDSIKSIKYILQKLTESICLG 672
            M K+++++LL AGVHFGHKAH WNPKM PYIY E  G+HIIDLIQTS LL+ ACNF Q A++  K+FLFVGTK+Q   +IAKEAQ CGA+Y+N+RWLGGMLTNW+T ++RI+RLK+LENQ+     ++LPKKEAA L KELE+L+KYF GVK M + PDII+IIDQK EI AIKEA++L  PIISILDTNC+P+LVT+PIPGNDD+++SIKYI++KL ESI  G
Sbjct:    1 MVKVELSELLAAGVHFGHKAHHWNPKMSPYIYTEKDGVHIIDLIQTSVLLKQACNFVQTASQTGKSFLFVGTKRQAAPVIAKEAQRCGAHYVNYRWLGGMLTNWITFRTRIQRLKDLENQQQQGEIDNLPKKEAAKLTKELERLRKYFTGVKTMTKEPDIIVIIDQKIEIIAIKEALALNKPIISILDTNCNPDLVTLPIPGNDDAVQSIKYIIEKLAESISNG 224          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig771.16649.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8F0JWX3_9PHAE1.270e-11873.89Ribosomal protein S2 n=1 Tax=Protohalopteris sp. T... [more]
A0A1I9LVT4_9PHAE5.550e-11874.7830S ribosomal protein S2, chloroplastic n=1 Tax=Pl... [more]
A0A8F0K065_9PHAE9.360e-11573.89Ribosomal protein S2 n=1 Tax=Desmarestia aculeata ... [more]
A0A7S6U9Z1_9STRA1.490e-11372.3230S ribosomal protein S2, chloroplastic n=1 Tax=Sc... [more]
D1GJH5_FUCVE2.050e-11370.8030S ribosomal protein S2, chloroplastic n=41 Tax=P... [more]
A0A141BSD4_9PHAE2.050e-11370.4330S ribosomal protein S2, chloroplastic n=12 Tax=S... [more]
A0A8E5XRD1_9PHAE6.160e-10868.2630S ribosomal protein S2, chloroplastic n=1 Tax=Is... [more]
A0A2U9NQ44_9STRA9.020e-10565.5030S ribosomal protein S2, chloroplastic n=1 Tax=Ac... [more]
A0A2I4Q2U3_9PHAE1.950e-10465.6530S ribosomal protein S2, chloroplastic n=1 Tax=Di... [more]
B7T1S3_VAULI3.280e-10467.4130S ribosomal protein S2, chloroplastic n=1 Tax=Va... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig771contigL-elsbetiae_contig771:12322..13014 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score347.8
Seed ortholog evalue3.8e-93
Seed eggNOG ortholog2880.D1J790
Preferred namerps2
KEGG rclassRC02795
KEGG koko:K02108,ko:K02967,ko:K03046
KEGG TC3.A.2.1
KEGG ReactionR00435,R00441,R00442,R00443
KEGG Pathwayko00190,ko00195,ko00230,ko00240,ko01100,ko03010,ko03020,map00190,map00195,map00230,map00240,map01100,map03010,map03020
KEGG ModuleM00157,M00178,M00179,M00183
Hectar predicted targeting categoryother localisation
GOsGO:0000313,GO:0000314,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005761,GO:0005763,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0019538,GO:0031974,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044429,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0070013,GO:0071704,GO:0098798,GO:1901564,GO:1901566,GO:1901576,GO:1990904
EggNOG free text desc.structural constituent of ribosome
EggNOG OGsCOG0052@1,KOG0832@2759
EC2.7.7.6
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,br01611,ko00000,ko00001,ko00002,ko00194,ko01000,ko03011,ko03021,ko03110,ko03400
Exons1
Model size693
Cds size693
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816856.3041222-CDS-L-elsbetiae_contig771:12321..130141622816856.3041222-CDS-L-elsbetiae_contig771:12321..13014Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig771 12322..13014 -
1691683865.0008125-CDS-L-elsbetiae_contig771:12321..130141691683865.0008125-CDS-L-elsbetiae_contig771:12321..13014Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig771 12322..13014 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig771.16649.1prot_L-elsbetiae_contig771.16649.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig771 12322..13014 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig771.16649.1

>prot_L-elsbetiae_contig771.16649.1 ID=prot_L-elsbetiae_contig771.16649.1|Name=mRNA_L-elsbetiae_contig771.16649.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=231bp
MNKIKVADLLTAGVHFGHKAHRWNPKMFPYIYKESHGIHIIDLIQTSKLL
ENACNFSQEAAKKKKTFLFVGTKKQIKSLIAKEAQNCGAYYINHRWLGGM
LTNWVTIKSRIKRLKELENQKLNNVFEDLPKKEAAILKKELEKLQKYFNG
VKDMEEIPDIIIIIDQKREITAIKEAISLKLPIISILDTNCDPNLVTIPI
PGNDDSIKSIKYILQKLTESICLGSQMIKK*
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mRNA from alignment at L-elsbetiae_contig771:12322..13014-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig771.16649.1 ID=mRNA_L-elsbetiae_contig771.16649.1|Name=mRNA_L-elsbetiae_contig771.16649.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=693bp|location=Sequence derived from alignment at L-elsbetiae_contig771:12322..13014- (Laminarionema elsbetiae ELsaHSoW15)
ATGAATAAAATTAAAGTAGCTGATCTTTTAACAGCAGGTGTTCATTTTGG TCATAAAGCTCATCGGTGGAATCCAAAAATGTTTCCTTATATTTATAAAG AATCACATGGAATTCATATTATAGATTTAATTCAAACTTCTAAATTACTA GAAAATGCTTGTAATTTTAGTCAAGAAGCCGCAAAAAAAAAAAAAACATT TTTATTTGTTGGAACAAAAAAGCAAATTAAATCTTTAATAGCTAAAGAAG CTCAAAATTGCGGTGCATATTATATAAATCATCGCTGGTTAGGAGGTATG TTAACAAATTGGGTTACAATAAAAAGTCGAATTAAACGATTAAAAGAATT AGAAAATCAAAAGTTAAATAATGTATTTGAAGATTTACCAAAAAAAGAAG CAGCTATATTAAAAAAAGAATTAGAAAAATTACAAAAATATTTTAATGGT GTTAAAGATATGGAAGAAATTCCTGATATCATTATTATCATAGATCAAAA AAGAGAAATTACTGCTATTAAAGAAGCAATTTCTTTAAAATTACCAATTA TTTCAATTTTAGATACAAATTGTGATCCAAATTTAGTTACTATACCAATT CCGGGTAATGATGATTCGATTAAATCAATTAAATATATTTTACAAAAATT AACTGAAAGCATTTGTTTAGGATCGCAAATGATTAAAAAATAA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig771:12322..13014-

>mRNA_L-elsbetiae_contig771.16649.1 ID=mRNA_L-elsbetiae_contig771.16649.1|Name=mRNA_L-elsbetiae_contig771.16649.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1386bp|location=Sequence derived from alignment at L-elsbetiae_contig771:12322..13014- (Laminarionema elsbetiae ELsaHSoW15)
ATGAATAAAATTAAAGTAGCTGATCTTTTAACAGCAGGTGTTCATTTTGG
TCATAAAGCTCATCGGTGGAATCCAAAAATGTTTCCTTATATTTATAAAG
AATCACATGGAATTCATATTATAGATTTAATTCAAACTTCTAAATTACTA
GAAAATGCTTGTAATTTTAGTCAAGAAGCCGCAAAAAAAAAAAAAACATT
TTTATTTGTTGGAACAAAAAAGCAAATTAAATCTTTAATAGCTAAAGAAG
CTCAAAATTGCGGTGCATATTATATAAATCATCGCTGGTTAGGAGGTATG
TTAACAAATTGGGTTACAATAAAAAGTCGAATTAAACGATTAAAAGAATT
AGAAAATCAAAAGTTAAATAATGTATTTGAAGATTTACCAAAAAAAGAAG
CAGCTATATTAAAAAAAGAATTAGAAAAATTACAAAAATATTTTAATGGT
GTTAAAGATATGGAAGAAATTCCTGATATCATTATTATCATAGATCAAAA
AAGAGAAATTACTGCTATTAAAGAAGCAATTTCTTTAAAATTACCAATTA
TTTCAATTTTAGATACAAATTGTGATCCAAATTTAGTTACTATACCAATT
CCGGGTAATGATGATTCGATTAAATCAATTAAATATATTTTACAAAAATT
AACTGAAAGCATTTGTTTAGGATCGCAAATGATTAAAAAATAAATGAATA
AAATTAAAGTAGCTGATCTTTTAACAGCAGGTGTTCATTTTGGTCATAAA
GCTCATCGGTGGAATCCAAAAATGTTTCCTTATATTTATAAAGAATCACA
TGGAATTCATATTATAGATTTAATTCAAACTTCTAAATTACTAGAAAATG
CTTGTAATTTTAGTCAAGAAGCCGCAAAAAAAAAAAAAACATTTTTATTT
GTTGGAACAAAAAAGCAAATTAAATCTTTAATAGCTAAAGAAGCTCAAAA
TTGCGGTGCATATTATATAAATCATCGCTGGTTAGGAGGTATGTTAACAA
ATTGGGTTACAATAAAAAGTCGAATTAAACGATTAAAAGAATTAGAAAAT
CAAAAGTTAAATAATGTATTTGAAGATTTACCAAAAAAAGAAGCAGCTAT
ATTAAAAAAAGAATTAGAAAAATTACAAAAATATTTTAATGGTGTTAAAG
ATATGGAAGAAATTCCTGATATCATTATTATCATAGATCAAAAAAGAGAA
ATTACTGCTATTAAAGAAGCAATTTCTTTAAAATTACCAATTATTTCAAT
TTTAGATACAAATTGTGATCCAAATTTAGTTACTATACCAATTCCGGGTA
ATGATGATTCGATTAAATCAATTAAATATATTTTACAAAAATTAACTGAA
AGCATTTGTTTAGGATCGCAAATGATTAAAAAATAA
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