mRNA_L-elsbetiae_contig7703.16644.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig7703.16644.1
Unique NamemRNA_L-elsbetiae_contig7703.16644.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig7703.16644.1 vs. uniprot
Match: D8LFP6_ECTSI (Ef-hand domain (C-terminal) containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFP6_ECTSI)

HSP 1 Score: 550 bits (1418), Expect = 1.270e-195
Identity = 298/329 (90.58%), Postives = 309/329 (93.92%), Query Frame = 1
Query:    1 MSTRWATSMPALPLAASSSEFPMVPGIRRGHGPYVKASCGRMLQGERPGSSGMIRPSQSQPILRGYGQGTRPGTAGSSVPGHTWEGSCIPDYITKEKQVLRFFAYFQEPVHEGGSMDATGFRVRKFSIMYFLSDNTISIEEPRITNSGLSQGKFMRRLQVTRPLNACARDARSAGGSATPVRATGXXXXXXXXXXXXXXXXXXGGASPARDIYAPGDFGVGEEVWIHGRRFRIVDADLTTRQWFQRNLGRGLLPSEDYPDDGYGAERAKVSVPKKRSMMPAREKGEFYKKDRKVLRFFCKYKDSRLQGDKRDYILYYYLLNDTIEIKEV 987
            MSTRWATSMPALPLA+ +S+FPMVPGIRRGHGPYVK     MLQG RPGSSGMIR S+SQPILRGYG+GTRPGTAGSSVP  T EGSCIPDYITKEKQVLRFFAYFQEPVHEGGSMDATGFRVRKFSIMYFLSD+TISIEEPRITNSGL+QGKFMRRLQVTRPLN+CARDARSAGGSATPVRATGXXXXXXXXXXXXXXXXXX    P RDIYAPGDFGVGEEVWIHGRRFRIVDADLTTRQWFQRNLGR L P+E+YP+DGYGAERAKVS PKKRSMMPAREKGEFYKKDRKVLRFFCKYKD RLQGDKRDYILYYYLLNDTIEIKEV
Sbjct:    1 MSTRWATSMPALPLASPTSDFPMVPGIRRGHGPYVK-----MLQGARPGSSGMIRSSKSQPILRGYGEGTRPGTAGSSVPARTREGSCIPDYITKEKQVLRFFAYFQEPVHEGGSMDATGFRVRKFSIMYFLSDSTISIEEPRITNSGLTQGKFMRRLQVTRPLNSCARDARSAGGSATPVRATGXXXXXXXXXXXXXXXXXXT-TPPPRDIYAPGDFGVGEEVWIHGRRFRIVDADLTTRQWFQRNLGRSLKPTENYPEDGYGAERAKVSAPKKRSMMPAREKGEFYKKDRKVLRFFCKYKDCRLQGDKRDYILYYYLLNDTIEIKEV 323          
BLAST of mRNA_L-elsbetiae_contig7703.16644.1 vs. uniprot
Match: A0A6H5JPJ7_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPJ7_9PHAE)

HSP 1 Score: 499 bits (1285), Expect = 8.010e-174
Identity = 295/423 (69.74%), Postives = 306/423 (72.34%), Query Frame = 1
Query:    1 MSTRWATSMPALPLAASSSEFPMVPGIRRGHGPYVKAS-----------CGR---------------------------------------------------------------MLQGERPGSSGMIRPSQSQPILRGYGQGTRPGTAGSSVPGHTWEGSCIPDYITKEKQVLRFFAYFQEPVHEGGSMDATGFRVRKFSIMYFLSDNTISIEEPRITNSGLSQGKFMRRLQVTRPLNACARDARSAGGSATPVRATGXXXXXXXXXXXXXXXXXXGGASPARDIYAPGDFGVGEEVWIHGRRFRIVDADLTTRQWFQRNLGRGLLPSEDYPDDGYGAERAKVSVPKK--------------------RSMMPAREKGEFYKKDRKVLRFFCKYKDSRLQGDKRDYILYYYLLNDTIEIKEV 987
            MSTRWATSMPALPLA+S+S+FPMVPGIRRGHGPYVKAS           C R                                                               MLQG RPGSSGMIRPS+SQPILRGYG+        SSVP  T EGSCIPDYITKEKQVLRFFAYFQEPVHEGGSMDATGFRVRKFSIMYFLSD+TISIEEPRITNSGL+QGKFMRRLQVTRPLN+CARDARSAGGSATPVRATGXXXXXXXXXXXXXXXXX     P RDIYAPGDFGVGEEVWIHGRRFRIVDADLTTRQWFQRNLGR L  +E+YP+DGYGAERAKVS PKK                    RSMMPAREKGEFYKKDRKVLRFFCKYKDSRLQGDKRDYILYYYLLNDTIEIKEV
Sbjct:    1 MSTRWATSMPALPLASSTSDFPMVPGIRRGHGPYVKASDVVERNGVAQWCQRRAHVHMIECTWPIFPLKAGLALLAWAAGGVNGMVGSSLFTFLGKPYHEGTRTPGALLGMAAPQMLQGTRPGSSGMIRPSKSQPILRGYGEXXXXXXXXSSVPARTREGSCIPDYITKEKQVLRFFAYFQEPVHEGGSMDATGFRVRKFSIMYFLSDSTISIEEPRITNSGLTQGKFMRRLQVTRPLNSCARDARSAGGSATPVRATGXXXXXXXXXXXXXXXXXAT-TPPPRDIYAPGDFGVGEEVWIHGRRFRIVDADLTTRQWFQRNLGRSLKAAENYPEDGYGAERAKVSAPKKSWEKIAHCPPAKFPNKLARFRSMMPAREKGEFYKKDRKVLRFFCKYKDSRLQGDKRDYILYYYLLNDTIEIKEV 422          
BLAST of mRNA_L-elsbetiae_contig7703.16644.1 vs. uniprot
Match: A0A835Z5Q7_9STRA (Ef-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5Q7_9STRA)

HSP 1 Score: 274 bits (700), Expect = 4.850e-87
Identity = 157/336 (46.73%), Postives = 194/336 (57.74%), Query Frame = 1
Query:   49 SSSEFPMVPGIRRGHGPYVKASCGRMLQGERPGSSGMIRPSQSQPILRGYGQGTRPGTAGSSVPGHTWEGSCIPDYITKEKQVLRFFAYFQEPVHEGGSMDATGFRVRKFSIMYFLSDNTISIEEPRITNSGLSQGKFMRRLQVTRPLNACARDARSAGGSATPVRATGXXXXXXXXXXXXXXXXXXGGASPARDIYAPGDFGVGEEVWIHGRRFRIVDADLTTRQWFQRNLGRGLLPSEDYPDDGYGAERAKVSVPKKRSM-MPA----------------------REKGEFYKKDRKVLRFFCKYKDSRLQGDKRDYILYYYLLNDTIEIKEV 987
            S  + PMVPGI R    Y+K+  G+ L G     +G + P  +         G RPGTA  +   H      +P YITKE QVLRF AYFQEPV+EGGS+DA GFRVR F++ Y LSD T++IEEPR+ NSGL+QGKFM+R +V RP        R  GG                                   +Y P DF VGEE+W++GRRFRIVDAD  TR+W++ NLG    P+ED PDDGY  ER +  VPK+    +P                       REKGE++KKDRKVLRFFC+Y+D RLQGDKRDY+LYYYLLNDT+E+KEV
Sbjct:    7 SLPDLPMVPGIYRAPNGYLKSCTGQGLGGSGMSCAGSVAPRSTV--------GPRPGTALGTH--HGVNSKKVPSYITKEGQVLRFRAYFQEPVYEGGSVDAAGFRVRVFAVNYHLSDETMAIEEPRVQNSGLTQGKFMKRTKVERP--------RGVGGG----------------------------------VYQPADFCVGEEIWVYGRRFRIVDADARTREWYRENLGLEQGPAEDVPDDGYARERQRFEVPKQTEAGLPLGTGSGVAAGGAVTGGAAARAVRREKGEYFKKDRKVLRFFCRYEDQRLQGDKRDYVLYYYLLNDTVEVKEV 290          
BLAST of mRNA_L-elsbetiae_contig7703.16644.1 vs. uniprot
Match: A0A7S1UHB1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UHB1_9STRA)

HSP 1 Score: 134 bits (338), Expect = 2.540e-31
Identity = 105/328 (32.01%), Postives = 153/328 (46.65%), Query Frame = 1
Query:   61 FPMVPGIRRGHGPYVKASC------------------GRMLQGERPGSSGMIRPSQSQPIL-RGYGQGTRPGTAGSSVPGHTWEGSCIPDYITKEKQVLRFFAYFQEPVHEGGSMDATGFRVRKFSIMYFLSDNTISIEEPRITNSGLSQGKFMRRLQVTRPLNACARDARSAGGSATPVRATGXXXXXXXXXXXXXXXXXXGGASPARDIYAPGDFGVGEEVWIHGRRFRIVDADLTTRQWFQRNLGRGLLPSEDYPDDGYGAERAKVSVPKKRSMMPAREKGEFYKKDRKVLRFFCKYKDSRLQGDKRDYILYYYLLNDTIEIKEV 987
             P VPG+RR    Y+KA                    G+ L    P    ++  SQS+P+  R + +    G   SS      + +        +  VLRFF Y+QEP+ E     A+   VR+  + +++ D TISI+EP+I NSG+ QG+FMRR  V +                                              A   +  GDF +G ++ I GR F+IVDAD  TR+ +  ++G  +  S  YP    G +R  V  P+  S      KG+F+ +DRKVLRF+C ++D R  G+ RDYIL+Y+LLNDT+EI+EV
Sbjct:    8 LPCVPGMRREMSGYMKAKTQNGGYAPRGHLLTEKPPVGKALTFGAPTLDNVMVQSQSEPVFDRSFNKDYAMGPETSSP-----DATAAAAANNSDGTVLRFFVYYQEPL-EDYFESASSSTVRRCILNFYMEDATISIDEPKIANSGIDQGRFMRRTLVLKD---------------------------------------------ASVNFEAGDFFIGADINIFGRVFKIVDADSATRREYD-SMGMPMGGSLPYPAAPKGQQR--VRNPESPSRY---SKGQFFNRDRKVLRFYCTWQDDRTYGEFRDYILHYFLLNDTVEIREV 278          
BLAST of mRNA_L-elsbetiae_contig7703.16644.1 vs. uniprot
Match: H3GCI7_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GCI7_PHYRM)

HSP 1 Score: 121 bits (303), Expect = 5.680e-28
Identity = 85/251 (33.86%), Postives = 123/251 (49.00%), Query Frame = 1
Query:  259 SCIPDYITKEKQVLRFFAYFQEPVHEGGSMDATGFRVRKFSIMYFLSDNTISIEEPRITNSGLSQGKFMRRLQVTRPLNACARDARSAGGSATPVRATGXXXXXXXXXXXXXXXXXXGGASPARDIYAPGDFGVGEEVWIHGRRFRIVDADLTTRQWFQRNLGRGLLPSEDYPDDGYGAERAKVSVPKKRSMMPAREKG--------EFYKKDRKVLRFFCKYKDSR-LQGDKRDYILYYYLLNDTIEIKE 984
            S  P +IT ++ VLRFFAYF EPV        T  RVR+  + ++LSD +ISI EPR+ NSG++QG+FMRR  V           R  GGS+T                             + D Y P DF +G E+ ++GR F IV  D  TR ++   LG  L     YPD+   ++  +V   K +  +  R  G        +F+   +KVLRF+  + D   L  + R ++L+YYL +DT+E+ E
Sbjct:  104 STQPAWITHDRLVLRFFAYFMEPVELADGQ--TEERVRRVVVCFYLSDRSISISEPRVANSGIAQGEFMRRTIV-----------RKNGGSSTAFHRDDI----------------------SDDYYTPEDFRIGGELRLYGRTFHIVGCDAATRSFYTEALGETLETPRMYPDES-NSKMDEVDELKTQLRVRTRALGASKAEATRKFHDLSQKVLRFYASWHDDHPLYPETRYFVLHYYLCDDTVEVVE 318          
BLAST of mRNA_L-elsbetiae_contig7703.16644.1 vs. uniprot
Match: A0A662WIN0_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WIN0_9STRA)

HSP 1 Score: 122 bits (307), Expect = 3.050e-27
Identity = 84/248 (33.87%), Postives = 126/248 (50.81%), Query Frame = 1
Query:  268 PDYITKEKQVLRFFAYFQEPVH-EGGSMDATGFRVRKFSIMYFLSDNTISIEEPRITNSGLSQGKFMRRLQVTRPLNACARDARSAGGSATPVRATGXXXXXXXXXXXXXXXXXXGGASPARDIYAPGDFGVGEEVWIHGRRFRIVDADLTTRQWFQRNLGRGLLPSEDYPDDGYG----AERAKVSVPKKRSMMPAREKG---EFYKKDRKVLRFFCKYKDSR-LQGDKRDYILYYYLLNDTIEIKE 984
            P ++T ++ VLRFFAYF EPV    G ++    R+R+  + ++LSD ++SI EPR+ NSG++QG+FMRR  V +P         S G                               S   D YAP DF VG E+ ++GR F +VD D  TR+++   LGR L     YPD+        E+ K  +  +   + A E     +F+   +KVLRFF  ++D   L  + R ++L+YYL +DT+E+ E
Sbjct:   94 PAWLTHDRLVLRFFAYFAEPVELADGRVEQ---RIRRVVVCFYLSDRSLSISEPRVANSGIAQGEFMRRTAVRKP---------SRG-------------------------------SDLDDQYAPEDFRVGGELRLYGRTFHLVDCDEATRRFYAEALGRTLSSPCKYPDESGSKTDEVEQLKTQLRARTRAIGASEAEATRKFHDLSQKVLRFFTSWRDEHPLYPETRRFVLHYYLCDDTVEVVE 298          
BLAST of mRNA_L-elsbetiae_contig7703.16644.1 vs. uniprot
Match: A0A068WZC5_ECHGR (EF hand domain containing family member C2 n=3 Tax=Echinococcus TaxID=6209 RepID=A0A068WZC5_ECHGR)

HSP 1 Score: 121 bits (303), Expect = 9.120e-27
Identity = 94/275 (34.18%), Postives = 127/275 (46.18%), Query Frame = 1
Query:  211 RPGTAGSSVPGHTWE----------GSCIPDYITKEKQVLRFFAYFQEPVHEGGSMDATGFRVRKFSIMYFLSDNTISIEEPRITNSGLSQGKFMRRLQVTRPLNACARDARSAGGSATPVRATGXXXXXXXXXXXXXXXXXXGGASPARDIYAPGDFGVGEEVWIHGRRFRIVDADLTTRQWFQRNLGRGLLPSEDYPDDGYGAERAKVSVPKKRSMMPAREKG------EFYKKDRKVLRFFCKYKDS-RLQGDKRDYILYYYLLNDTIEIKE 984
            +PG  G  +PG   +          GS  P +IT +KQVL F AYFQ+ VHE  S D   +RVR+  ++++L D+TI + EPRI NS L QG  +RR ++ +P                P                                Y   DF VG ++ ++GR +R+V  D  T   F R LG  +   E  PDD Y   R  VS     +M P R         +F   DR VLRFFC + D+  L GD RD++L Y+L +DTIEI E
Sbjct:   11 KPGIGGEPLPGQRIDPPKSRYPDGHGSSAPAWITFDKQVLCFEAYFQQAVHE--SRDEQ-YRVRRCQVLFYLEDDTIQVTEPRIQNSALPQGTIVRRHRIRKP---------------PPYEGC---------------------------FYTVDDFNVGMDLELYGRVYRLVSCDKFTAN-FLRKLGVRVNEPEPIPDDPYTIHRISVSD----AMQPRRPHERVDTLRQFLNHDRHVLRFFCTWDDTGSLYGDVRDFVLNYFLGDDTIEIHE 235          
BLAST of mRNA_L-elsbetiae_contig7703.16644.1 vs. uniprot
Match: A0A6A3FYA6_9STRA (Uncharacterized protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3FYA6_9STRA)

HSP 1 Score: 119 bits (297), Expect = 1.370e-26
Identity = 82/248 (33.06%), Postives = 122/248 (49.19%), Query Frame = 1
Query:  268 PDYITKEKQVLRFFAYFQEPVHEGGSMDATGFRVRKFSIMYFLSDNTISIEEPRITNSGLSQGKFMRRLQVTRPLNACARDARSAGGSATPVRATGXXXXXXXXXXXXXXXXXXGGASPARDIYAPGDFGVGEEVWIHGRRFRIVDADLTTRQWFQRNLGRGLLPSEDYPDDGYGAERAKVSVPKKRSMMPAREKG--------EFYKKDRKVLRFFCKYKDSR-LQGDKRDYILYYYLLNDTIEIKE 984
            P +IT ++ VLRFFAYF EPV        T  R+R+  + ++LSD +ISI EPR+ NSG+ QG+FMRR  V           R +G  +  +                           + D Y+P DF +G E+ ++GR F IVD D  TR ++   LG  L     YPD+   ++  +V   K +  +  R  G        +F+   +KVLRF+  + D   L  + R ++L+YYL +DT+EI E
Sbjct:  107 PAWITHDRLVLRFFAYFTEPVELADGR--TENRIRRVVVCFYLSDRSISISEPRVANSGIPQGEFMRRTVV-----------RKSGNKSNSLPRENI----------------------SDDFYSPEDFRIGGELRLYGRIFHIVDCDAATRSFYTEALGEALETPRMYPDESR-SKLDEVDELKNQLQVRTRVLGASKAEATRKFHDLSQKVLRFYASWHDDHPLYPETRHFVLHYYLCDDTVEIVE 318          
BLAST of mRNA_L-elsbetiae_contig7703.16644.1 vs. uniprot
Match: A0A0D2JH69_9CHLO (EF-hand domain-containing protein 1 n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2JH69_9CHLO)

HSP 1 Score: 116 bits (291), Expect = 1.690e-26
Identity = 80/265 (30.19%), Postives = 125/265 (47.17%), Query Frame = 1
Query:  256 GSCIPDYITKEKQVLRFFAYFQEPVHEGGSMDATGFRVRKFSIMYFLSDNTISIEEPRITNSGLSQGKFMRRLQVTRPLNACARDARSAGGSATPVRATGXXXXXXXXXXXXXXXXXXGGASPARDIYAPGDFGVGEEVWIHGRRFRIVDADLTTRQWFQRNLGRGLLPSEDYPDDGYGAERAKVSV----PKKRS----------------MMPAREKGEFYKKDRKVLRFFCKYKDSR-LQGDKRDYILYYYLLNDTIEIKEV 987
            G  +P ++  +++VLRF+ YFQE V E    +    R+R+ ++ Y+L+D+++ + EP+  NSG+ QG F+RR QV R            G  AT V                                 P D  VG  + ++GR F +VD D  TR WF+ NL      ++ YP D   A R K  +    P K+S                ++   +  +F   + KVLRF+C + D + + GD+R Y+L++YL +DT+EI EV
Sbjct:   13 GETLPKWVENDRKVLRFWGYFQESVTES---NIENHRMRRVALHYYLADDSLQVAEPKQDNSGIPQGIFVRRHQVPR----------GDGSGATIV---------------------------------PADLAVGATIDVYGRTFFLVDCDQFTRAWFRENLQLEQADAQGYPSDQVDAYRTKFGLTSTGPSKKSNDLATFVEARLGKPSHLLEGDKLRQFIANNGKVLRFWCVWDDRQGMYGDRRPYVLHFYLEDDTVEINEV 231          
BLAST of mRNA_L-elsbetiae_contig7703.16644.1 vs. uniprot
Match: A0A329RR92_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RR92_9STRA)

HSP 1 Score: 120 bits (301), Expect = 1.880e-26
Identity = 85/248 (34.27%), Postives = 124/248 (50.00%), Query Frame = 1
Query:  268 PDYITKEKQVLRFFAYFQEPVHEGGSMDATGFRVRKFSIMYFLSDNTISIEEPRITNSGLSQGKFMRRLQVTRPLNACARDARSAGGSATPVRATGXXXXXXXXXXXXXXXXXXGGASPARDIYAPGDFGVGEEVWIHGRRFRIVDADLTTRQWFQRNLGRGLLPSEDYPDDGYG----AERAKVSVPKKRSMMPAREKGE----FYKKDRKVLRFFCKYKDSR-LQGDKRDYILYYYLLNDTIEIKE 984
            P +IT ++ VLRFFAYF EPV        T  RVR+  + ++LSD +ISI EPR+TNSG+ QG+FMRR  V +          S   S T  R                        + + D Y+P DF +G E+ ++GR F IVD D  TR ++   LG  L     YPD+        +  K  + ++R+      K E    F+   +KVLRF+  ++D   L  + R +I++YYL +DT+E+ E
Sbjct:  107 PAWITHDRLVLRFFAYFTEPVELADGR--TEKRVRRVVVCFYLSDRSISISEPRVTNSGIPQGEFMRRTVVRK----------SGNKSLTFPRE-----------------------NTSDDFYSPEDFRIGGELRLYGRTFHIVDCDAATRSFYSEALGETLETPRMYPDESNSRMNEVDELKNQL-RERTRAIGASKAEATRKFHDLSQKVLRFYASWRDDHPLYPETRYFIVHYYLCDDTVEVIE 318          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7703.16644.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFP6_ECTSI1.270e-19590.58Ef-hand domain (C-terminal) containing protein n=1... [more]
A0A6H5JPJ7_9PHAE8.010e-17469.74Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A835Z5Q7_9STRA4.850e-8746.73Ef-hand domain-containing protein n=1 Tax=Tribonem... [more]
A0A7S1UHB1_9STRA2.540e-3132.01Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
H3GCI7_PHYRM5.680e-2833.86Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A662WIN0_9STRA3.050e-2733.87Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A068WZC5_ECHGR9.120e-2734.18EF hand domain containing family member C2 n=3 Tax... [more]
A0A6A3FYA6_9STRA1.370e-2633.06Uncharacterized protein n=1 Tax=Phytophthora fraga... [more]
A0A0D2JH69_9CHLO1.690e-2630.19EF-hand domain-containing protein 1 n=1 Tax=Monora... [more]
A0A329RR92_9STRA1.880e-2634.27Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7703contigL-elsbetiae_contig7703:5110..8531 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score554.7
Seed ortholog evalue2.9e-155
Seed eggNOG ortholog2880.D8LFP6
KEGG koko:K12847
KEGG Pathwayko03040,map03040
KEGG ModuleM00354
Hectar predicted targeting categoryother localisation
EggNOG free text desc.alpha-tubulin binding
EggNOG OGsKOG0043@1,KOG0043@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03041
Ec32 ortholog descriptionUncharacterised domain DM10
Ec32 orthologEc-01_001420.1
Exons5
Model size987
Cds size987
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7703.16644.1prot_L-elsbetiae_contig7703.16644.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig7703 5110..8531 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816856.019396-CDS-L-elsbetiae_contig7703:5109..52321622816856.019396-CDS-L-elsbetiae_contig7703:5109..5232Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7703 5110..5232 +
1691683864.7953608-CDS-L-elsbetiae_contig7703:5109..52321691683864.7953608-CDS-L-elsbetiae_contig7703:5109..5232Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7703 5110..5232 +
1622816856.0319493-CDS-L-elsbetiae_contig7703:5672..59351622816856.0319493-CDS-L-elsbetiae_contig7703:5672..5935Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7703 5673..5935 +
1691683864.8098626-CDS-L-elsbetiae_contig7703:5672..59351691683864.8098626-CDS-L-elsbetiae_contig7703:5672..5935Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7703 5673..5935 +
1622816856.0427601-CDS-L-elsbetiae_contig7703:6288..64911622816856.0427601-CDS-L-elsbetiae_contig7703:6288..6491Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7703 6289..6491 +
1691683864.8224514-CDS-L-elsbetiae_contig7703:6288..64911691683864.8224514-CDS-L-elsbetiae_contig7703:6288..6491Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7703 6289..6491 +
1622816856.0536668-CDS-L-elsbetiae_contig7703:6715..69531622816856.0536668-CDS-L-elsbetiae_contig7703:6715..6953Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7703 6716..6953 +
1691683864.8340354-CDS-L-elsbetiae_contig7703:6715..69531691683864.8340354-CDS-L-elsbetiae_contig7703:6715..6953Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7703 6716..6953 +
1622816856.065612-CDS-L-elsbetiae_contig7703:8371..85311622816856.065612-CDS-L-elsbetiae_contig7703:8371..8531Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7703 8372..8531 +
1691683864.8435366-CDS-L-elsbetiae_contig7703:8371..85311691683864.8435366-CDS-L-elsbetiae_contig7703:8371..8531Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7703 8372..8531 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig7703.16644.1

>prot_L-elsbetiae_contig7703.16644.1 ID=prot_L-elsbetiae_contig7703.16644.1|Name=mRNA_L-elsbetiae_contig7703.16644.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=329bp
MSTRWATSMPALPLAASSSEFPMVPGIRRGHGPYVKASCGRMLQGERPGS
SGMIRPSQSQPILRGYGQGTRPGTAGSSVPGHTWEGSCIPDYITKEKQVL
RFFAYFQEPVHEGGSMDATGFRVRKFSIMYFLSDNTISIEEPRITNSGLS
QGKFMRRLQVTRPLNACARDARSAGGSATPVRATGGGGGDSEGGVIGGKN
GGSGGASPARDIYAPGDFGVGEEVWIHGRRFRIVDADLTTRQWFQRNLGR
GLLPSEDYPDDGYGAERAKVSVPKKRSMMPAREKGEFYKKDRKVLRFFCK
YKDSRLQGDKRDYILYYYLLNDTIEIKEV
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mRNA from alignment at L-elsbetiae_contig7703:5110..8531+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig7703.16644.1 ID=mRNA_L-elsbetiae_contig7703.16644.1|Name=mRNA_L-elsbetiae_contig7703.16644.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3422bp|location=Sequence derived from alignment at L-elsbetiae_contig7703:5110..8531+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTCTACCAGATGGGCGACAAGCATGCCAGCCCTCCCGCTGGCAGCTTC TTCCAGTGAATTTCCCATGGTTCCGGGCATACGACGTGGCCATGGGCCAT ACGTGAAGGCAAGTTGCGGTCGAGTACAAATGTATCTATATGTAGATATG TAGATTGGGTGCATACCGCGGGGTTCGTCGGCATATCGTAGTCGGCGTGC ATGTCATGCGTTGGGCTCCGCTTGAAGGGAACTTGACCGAGCAAACAGTG GTGGAAATGCGGTGCAAATATGGGTCTCTGTAATTAGCTGATGCCCGGCT TATTGCTCTAGACTTAACTCCTTACGTCTGGATGATGTGTGAGCCAACAC AGAAGCCTTTGTTTCCTGCAAAACTAGAGCGCGCGGTTAAGAACGTTTGG TGCTTGTACATTATTGAAGCAAACCGAATGTATTGGGAAGCTCGATATGA ACTGCTTGTTGTACAGTAGTCTGGTCTGGATAGTATCCCGTATCCATAAC ACAGCAGTTGTCGCACTCTCGCCGTTGCTCGCTCCACTCTGTCCGATTGT CGTCGCTCAACAGATGCTGCAGGGGGAGCGCCCGGGATCGTCCGGAATGA TCAGGCCGTCCCAGTCCCAACCCATCCTACGCGGGTACGGGCAAGGCACC CGACCAGGTACTGCGGGGTCGAGTGTACCCGGCCATACGTGGGAGGGGAG CTGCATTCCGGACTACATCACGAAAGAGAAGCAGGTGCTTCGGTTCTTTG CGTACTTCCAAGAGCCCGTTCACGAAGGCGGGAGCATGGACGCCACGGGG TTCCGCGTGCGAAAGTTCAGCATCATGTGAGAGAAGGAGGCAGCCAGCTA AGAAAAGGGTATCGTACGCATGTTGGACCGCCGAAACTGCTGGGGTATGT TTTGTAGTGGGGGGGGGGATTTTTCGTCCAAGGCGTATGTATGCCGCGGG TAGTCGCGCGTGCTGTGCAGGTAGCCCCTGTAGACTACACCTCGGCGCCG ACAAGGGCCCGTTCCATCCCTCAAACAATCACGCCCCCTCCAATCGCATC AAGCATCTCCCATGCCCCCTTTCTCCCTTCAACCCGCCCCCTCACTCCAC CGCCTTCTCTCGCTCGCCTACCTTTCCGATCCTGAACGATTGCCACCCCC CCCCCCAACCCCCCCATAAATGGAATCAGGTACTTCCTCTCGGACAACAC CATCTCCATCGAGGAGCCGCGAATCACAAACAGCGGCCTGTCGCAGGGAA AGTTTATGAGGCGCCTGCAGGTCACGCGGCCCCTCAACGCCTGTGCCCGG GACGCCCGCAGCGCGGGCGGCAGTGCCACTCCAGTGCGAGCCACCGGCGG TGGCGGAGGAGACAGCGAAGGCGGTGTTATAGGTGCGGGTCAGGACTTTT TCAATAACTTCTTGCCTTGGCCGCCCAAACCTCAGAAAAGCGGGGAGTGT TTTTCCTTCTGCTGGAGCGGCTTTTACATTTTTGTATCTGTTAAAACAGA GCATCTCTCGGCATGCCGCCCAGCACCTAGCTTCGACAGCCAAGAGGAAC CCATCCATAAAGTGCCCATTGCTTACTGTCCCTCAAAACGTGAACAGGTG GGGGAGGGGGAAAGAACGGCGGCAGCGGTGGAGCCTCTCCCGCGCGAGAC ATCTACGCCCCCGGAGATTTCGGCGTCGGGGAAGAGGTTTGGATCCACGG CCGCAGGTTTAGGATCGTAGATGCGGACTTGACGACCCGGCAGTGGTTTC AGCGAAACCTCGGACGCGGTCTGCTGCCGTCGGAGGACTATCCTGACGAC GGTTACGGCGCAGAACGCGCCAAGGTTTCCGTCCCTAAGAAGAGGTGAGA TGGAGAGAGATGTGGGTGGAGGCGACGGGAGTGGATATTTAGAGGCCAAA AATATGGGAGAAGATGTGGTCGTAGGGATAAGCAAGAGGGGGCTATATGC GTTTCGGATACAGTAGTAACGTGCCAGGAGATTAACACTTGCTGTACGCT GGGTGAGATCGAAGCGGTTAACACCGTTTTGTTTTTTTGGGGGGGTGGGG TAAGACAAGCAGGGGGGGGACTTTACTTGCCTTGTTTTGTTTATTGTCGC AATACTTTGGCTAGGAAGAGCATGCACAGGCGGCAGAGAACGCTGCATTG TGTCTGGGGGCGTATCGTATCCACGGGGTCGGCGTGACAAAACATCAAGG ACAGGGTGGGAGAGGAGAAAAAGGAGTTCGTGAGTACTTAAATTGCCGGA CGAGGGGGCGGGGAAGAGTTTGTCGCACTCGGTGGGAATTTTTCATGTGT TGTGTTTTGGGAAGAGCCTTGGCTGGCGGACAACACGGGAAGACCCACGA CGAGGCGGCACCAAGGGAAGAAGCGCAAGACTACTGCGATTCCATTTTTT GTGAAAGCGAGGGTCTAGAAAGGAGGAGGGTGGGGGGGAGAGGCGCAGGA AATATTTGGGGCGTTGGAAGCGGGCGCCACCTGGTGGAAGGACGACGGAT TAGAAACGGAAGGCATTTGCATGCAAGTACAACTGTGTGCGGTGAGGGTT TGCGCACTGCATGCAGCATATATGATGTCGCCTTACGACGTAGTTCGAAG GATGGTGCGCGTCGTGTTGGGGTGGGGCGGGGGAAGAGGTGTAGAAGCTT ACGGGCGTCGCCCCACTGTAGCCAAAGACAACCCCACACCACGTCTAGCT CGCTCAAGTTTAAAAGCACGTCTCGGAGGAACTCACACCGAGGTTGCTAC AAATACTTGAACTTTTAGCTTTTGTTCAACAGAAACAACAGCAGCAGTGT TAGAGTTTAGCAGGCATTTTTGGCGGTGATTTTTTACGTCACTGGCCGGC GGGGACAGTAGGAGTGGCACAGTTTGACTTGTCACATAAAAATGAATACA TGAATTAGTGCGTTCGCCTGGAGTAGAGTCTCTCCGCTTCCTCCAACAGC AGTCCTTTGATATTGATTTCAGTTGTTTGAGGGTAGGGGGGGGGAGGGAG TCACTCAACATAGGGGTGCATGTGTTGCCCTGTTCTATCGCACCCCCTGC ATGCGTAGCTGGAACAAAAGCACGCGAGGTTTTGTGCAACATGGCAAGAA GTGGACAATGTTAAAATTAACCCGCTGCGCAAAAAGGGGGTGGTCTGAAC AAGAGTTGGTCTACAGCAGATGAAGACACACACGCTCCTGCGAAAAGTTG GACTTACCGAAGAAAATTGCACGTGTGGCTCACTCACAAACGCCAACAAA AACGCGCGAAAGGTCCATGATGCCGGCCCGCGAGAAGGGGGAGTTCTACA AAAAAGACCGGAAAGTTCTGCGATTTTTCTGCAAGTACAAAGACAGCCGC CTGCAGGGAGACAAGCGCGACTACATCCTCTACTACTACCTCCTCAACGA CACCATCGAGATCAAGGAGGTG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig7703:5110..8531+

>mRNA_L-elsbetiae_contig7703.16644.1 ID=mRNA_L-elsbetiae_contig7703.16644.1|Name=mRNA_L-elsbetiae_contig7703.16644.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1974bp|location=Sequence derived from alignment at L-elsbetiae_contig7703:5110..8531+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTCTACCAGATGGGCGACAAGCATGCCAGCCCTCCCGCTGGCAGCTTC
TTCCAGTGAATTTCCCATGGTTCCGGGCATACGACGTGGCCATGGGCCAT
ACGTGAAGGCAAGTTGCGGTCGAATGTCTACCAGATGGGCGACAAGCATG
CCAGCCCTCCCGCTGGCAGCTTCTTCCAGTGAATTTCCCATGGTTCCGGG
CATACGACGTGGCCATGGGCCATACGTGAAGGCAAGTTGCGGTCGAATGC
TGCAGGGGGAGCGCCCGGGATCGTCCGGAATGATCAGGCCGTCCCAGTCC
CAACCCATCCTACGCGGGTACGGGCAAGGCACCCGACCAGGTACTGCGGG
GTCGAGTGTACCCGGCCATACGTGGGAGGGGAGCTGCATTCCGGACTACA
TCACGAAAGAGAAGCAGGTGCTTCGGTTCTTTGCGTACTTCCAAGAGCCC
GTTCACGAAGGCGGGAGCATGGACGCCACGGGGTTCCGCGTGCGAAAGTT
CAGCATCATATGCTGCAGGGGGAGCGCCCGGGATCGTCCGGAATGATCAG
GCCGTCCCAGTCCCAACCCATCCTACGCGGGTACGGGCAAGGCACCCGAC
CAGGTACTGCGGGGTCGAGTGTACCCGGCCATACGTGGGAGGGGAGCTGC
ATTCCGGACTACATCACGAAAGAGAAGCAGGTGCTTCGGTTCTTTGCGTA
CTTCCAAGAGCCCGTTCACGAAGGCGGGAGCATGGACGCCACGGGGTTCC
GCGTGCGAAAGTTCAGCATCATGTACTTCCTCTCGGACAACACCATCTCC
ATCGAGGAGCCGCGAATCACAAACAGCGGCCTGTCGCAGGGAAAGTTTAT
GAGGCGCCTGCAGGTCACGCGGCCCCTCAACGCCTGTGCCCGGGACGCCC
GCAGCGCGGGCGGCAGTGCCACTCCAGTGCGAGCCACCGGCGGTGGCGGA
GGAGACAGCGAAGGCGGTGTTATAGGTACTTCCTCTCGGACAACACCATC
TCCATCGAGGAGCCGCGAATCACAAACAGCGGCCTGTCGCAGGGAAAGTT
TATGAGGCGCCTGCAGGTCACGCGGCCCCTCAACGCCTGTGCCCGGGACG
CCCGCAGCGCGGGCGGCAGTGCCACTCCAGTGCGAGCCACCGGCGGTGGC
GGAGGAGACAGCGAAGGCGGTGTTATAGGGGGAAAGAACGGCGGCAGCGG
TGGAGCCTCTCCCGCGCGAGACATCTACGCCCCCGGAGATTTCGGCGTCG
GGGAAGAGGTTTGGATCCACGGCCGCAGGTTTAGGATCGTAGATGCGGAC
TTGACGACCCGGCAGTGGTTTCAGCGAAACCTCGGACGCGGTCTGCTGCC
GTCGGAGGACTATCCTGACGACGGTTACGGCGCAGAACGCGCCAAGGTTT
CCGTCCCTAAGAAGAGGGGGAAAGAACGGCGGCAGCGGTGGAGCCTCTCC
CGCGCGAGACATCTACGCCCCCGGAGATTTCGGCGTCGGGGAAGAGGTTT
GGATCCACGGCCGCAGGTTTAGGATCGTAGATGCGGACTTGACGACCCGG
CAGTGGTTTCAGCGAAACCTCGGACGCGGTCTGCTGCCGTCGGAGGACTA
TCCTGACGACGGTTACGGCGCAGAACGCGCCAAGGTTTCCGTCCCTAAGA
AGAGGTCCATGATGCCGGCCCGCGAGAAGGGGGAGTTCTACAAAAAAGAC
CGGAAAGTTCTGCGATTTTTCTGCAAGTACAAAGACAGCCGCCTGCAGGG
AGACAAGCGCGACTACATCCTCTACTACTACCTCCTCAACGACACCATCG
AGATCAAGGAGGTGGTCCATGATGCCGGCCCGCGAGAAGGGGGAGTTCTA
CAAAAAAGACCGGAAAGTTCTGCGATTTTTCTGCAAGTACAAAGACAGCC
GCCTGCAGGGAGACAAGCGCGACTACATCCTCTACTACTACCTCCTCAAC
GACACCATCGAGATCAAGGAGGTG
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