mRNA_L-elsbetiae_contig77.16636.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig77.16636.1 vs. uniprot
Match: D7G6E4_ECTSI (PAP_fibrillin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6E4_ECTSI) HSP 1 Score: 214 bits (545), Expect = 2.230e-67 Identity = 102/117 (87.18%), Postives = 113/117 (96.58%), Query Frame = 2 Query: 212 TWNLVYTTTAGASGGKLGPFVGEVQQEVDIAEGLYINYVRVGPLTGELEATWEVVNKNQWKVVFKTIAFLLWGQQLVKKELGQAGLWTLSYLDNDMRVLTARSLERDTGNLYVLARA 562 TW+L+YTTT GASGGKLGPF+GEVQQEVDIAEGLY+NYVR+GPLTG LEATW+VVNK+QWKVVFK+IAFLL+GQQLVK EL QAGLWTLSYLD+DMRVLTARSLERDTGN+YVLARA Sbjct: 112 TWDLIYTTTPGASGGKLGPFIGEVQQEVDIAEGLYVNYVRLGPLTGRLEATWDVVNKSQWKVVFKSIAFLLFGQQLVKNELDQAGLWTLSYLDDDMRVLTARSLERDTGNVYVLARA 228
BLAST of mRNA_L-elsbetiae_contig77.16636.1 vs. uniprot
Match: K8Z6W7_NANGC (PAP_fibrillin domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z6W7_NANGC) HSP 1 Score: 123 bits (309), Expect = 1.260e-31 Identity = 64/125 (51.20%), Postives = 86/125 (68.80%), Query Frame = 2 Query: 212 TWNLVYTTTAGASGGKLGPFVGEVQQEVDIAEGLYINYVRV--GPLTGELEATWEVVNKNQWKVVFKTIAFLLWGQQLVKKE--LGQAGLWTLSYLDNDMRVLTARSLERD-----TGNLYVLAR 559 TW LVYT+T+G S GKLGPFVG+V Q++D A G Y+N+VR+ G + G L ATWEV N+WKV+F+ I F ++G LV K+ GQAG W L+Y+D D+R+LTA +L + N+YVL R Sbjct: 116 TWRLVYTSTSGGSAGKLGPFVGQVLQKIDTAGGDYVNFVRLFGGLVEGALVATWEVKGANEWKVIFQDITFRVFGIPLVDKKPLSGQAGQWKLTYVDEDLRILTAAALTNEGKPAKVSNIYVLRR 240
BLAST of mRNA_L-elsbetiae_contig77.16636.1 vs. uniprot
Match: A0A0G4E8H9_VITBC (PAP_fibrillin domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4E8H9_VITBC) HSP 1 Score: 119 bits (299), Expect = 4.300e-30 Identity = 58/121 (47.93%), Postives = 79/121 (65.29%), Query Frame = 2 Query: 215 WNLVYTTTAGASGGKLGPFVGEVQQEVDIAEGLYINYVRVGPLTGELEATWEVVNKNQWKVVFKTIAFLLWGQQLVKKELGQAGLWTLSYLDNDMRVLTARSLERDTG------NLYVLAR 559 W LVYTTT G+S GKLGPFVG+V Q +D+ +YINYV +GP+ LEA+W+V+ N+W+V F+ I F ++G L K EL G W ++YLD+D R+L AR + N+YVL R Sbjct: 123 WRLVYTTTPGSSAGKLGPFVGDVTQMIDMDSDVYINYVDIGPVQAFLEASWDVLGPNRWRVKFQNIGFRVFGIPLAKNELKNVGDWRMTYLDDDYRILWARGSRQQPDASAMPENVYVLRR 243
BLAST of mRNA_L-elsbetiae_contig77.16636.1 vs. uniprot
Match: A0A8J6CA72_DIALT (PAP_fibrillin domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CA72_DIALT) HSP 1 Score: 114 bits (286), Expect = 1.350e-28 Identity = 59/121 (48.76%), Postives = 80/121 (66.12%), Query Frame = 2 Query: 215 WNLVYTTTAGASGGKLGPFVGEVQQEVDIAEGLYINYVRVGP-----LTGELEATWEVVNKNQWKVVFKTIAFLLWGQQLVK-KELGQAGLWTLSYLDNDMRVLTARSLERDTGNLYVLAR 559 W LVYT+T+G S GK+GPFVG V+Q D+ +G Y N+V +GP +TGEL+ATW+V+ W+V FK+I+F L G +VK K L Q G W L Y D+D R+L A+ + N+YVL R Sbjct: 78 WQLVYTSTSGGSAGKIGPFVGRVEQHFDLRQGRYKNFVHLGPQAIDLVTGELQATWDVLGDALWRVNFKSISFFLLGLPIVKDKPLSQCGTWRLVYTDDDFRILWAQGGTKPE-NIYVLKR 197
BLAST of mRNA_L-elsbetiae_contig77.16636.1 vs. uniprot
Match: A0A7S4NCX2_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NCX2_9STRA) HSP 1 Score: 107 bits (266), Expect = 6.350e-25 Identity = 57/124 (45.97%), Postives = 81/124 (65.32%), Query Frame = 2 Query: 212 TWNLVYTTTAGASGGKLGPFVGEVQQEVDIAEGL-----YINYVRVG--PLTGELEATWEVVNKNQWKVVFKTIAFLLWGQQLVKKELGQAGLWTLSYLDNDMRVL-TARSLERDTGNLYVLAR 559 +W L Y+T G S GKLGPFVGEV+Q + I EG YINYVR+G + G L ATW+V+ +++W+V F ++ F + G LV+KELG G+W ++YLD D R+L A + N+Y+LA+ Sbjct: 153 SWKLTYSTNGGTSAGKLGPFVGEVEQLIRI-EGREDSPDYINYVRLGGGAVEGALTATWDVLAEDKWRVKFGSVTFRVLGVPLVEKELGAEGIWRMTYLDEDFRILYAAGGVNVPKENIYILAK 275
BLAST of mRNA_L-elsbetiae_contig77.16636.1 vs. uniprot
Match: A0A7S4DWF7_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DWF7_9EUKA) HSP 1 Score: 105 bits (261), Expect = 1.980e-24 Identity = 55/119 (46.22%), Postives = 76/119 (63.87%), Query Frame = 2 Query: 212 TWNLVYTTTAGASGGKLGPFVGEVQQEVDIAEGLYINYVRV--GPLTGELEATWEVVNKNQWKVVFKTIAFLLWGQQLVKKELGQAGLWTLSYLDNDMRVLTARS-LERDTGNLYVLAR 559 +W L+YTT G+S GK+GPFVG+V Q V++ +G Y+N V + G G L ATW+ V+ WKV FK I L+G L +KEL G W ++YLD+D RVL A ++ N+YVLA+ Sbjct: 130 SWKLLYTTNDGSSAGKIGPFVGDVVQNVELQDGEYVNIVSLANGAFRGVLTATWDNVSDKLWKVKFKDIKLELFGVVLQEKELPATGTWRMTYLDDDFRVLYAMGGKNQEKENVYVLAK 248
BLAST of mRNA_L-elsbetiae_contig77.16636.1 vs. uniprot
Match: A0A7S2XW95_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XW95_9STRA) HSP 1 Score: 101 bits (251), Expect = 4.890e-23 Identity = 50/117 (42.74%), Postives = 74/117 (63.25%), Query Frame = 2 Query: 215 WNLVYTTTAGASGGKLGPFVGEVQQEVDIAEGLYINYVRVGPLTGELEATWEVVNKNQWKVVFKTIAFLLWGQQLVKKELGQA--GLWTLSYLDNDMRVLTARSLERDTGNLYVLAR 559 W+L+YTT G S GKLGPFVGEV+Q +D+ E Y+N V VG + L ATW N W V+FK + F L+G ++ K+ + G W ++++D++MR+L A S + N+Y+L R Sbjct: 115 WDLIYTTNQGNSAGKLGPFVGEVKQIIDLQEDRYVNMVTVGIIEAVLMATWITRNNRNWTVIFKDVTFKLFGIPVISKKFPDSARGDWEMTFMDDNMRILYA-SGKAGVRNIYILGR 230
BLAST of mRNA_L-elsbetiae_contig77.16636.1 vs. uniprot
Match: A0A7S1IL70_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IL70_9EUGL) HSP 1 Score: 99.0 bits (245), Expect = 5.340e-23 Identity = 53/118 (44.92%), Postives = 75/118 (63.56%), Query Frame = 2 Query: 215 WNLVYTTTAGASGGKLGPFVGEVQQEVDIAEGLYINYVRVGP--LTGELEATWEVVNKNQWKVVFKTIAFLLWGQQLVKKELGQAGLWTLSYLDNDMRVLTARSLER-DTGNLYVLAR 559 W LVYT+ G+S GKLGPFVG+V Q V G Y N VR+G + L A W+V+ +W+V F+T+ F L+G L ++EL G+W ++YLD+ MRVL A + T N+Y+LA+ Sbjct: 40 WKLVYTSNQGSSAGKLGPFVGDVFQNVRYENGKYENVVRLGGGIVEAVLGADWDVLEPCKWQVNFRTLKFSLFGATLKEQELKAVGVWRMTYLDDSMRVLWASGGKNVKTENVYILAK 157
BLAST of mRNA_L-elsbetiae_contig77.16636.1 vs. uniprot
Match: A0A7S4CQT7_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4CQT7_9EUGL) HSP 1 Score: 97.4 bits (241), Expect = 8.910e-21 Identity = 53/118 (44.92%), Postives = 73/118 (61.86%), Query Frame = 2 Query: 215 WNLVYTTTAGASGGKLGPFVGEVQQEVDIAEGLYINYVRVGPLTGE--LEATWEVVNKNQWKVVFKTIAFLLWGQQLVKKELGQAGLWTLSYLDNDMRVLTARSLER-DTGNLYVLAR 559 W L+YTT G S GKLGPFVG+V Q V + G Y N VR+GP E L A W+V+ +W+V F+ I F L+G + +KE+ G+W ++YLD+ MRVL A + N+YVL + Sbjct: 233 WKLLYTTNTGNSAGKLGPFVGDVFQNVVYSSGKYENIVRLGPGIVEACLGADWDVLGPCKWQVNFRYIRFSLFGNVVSEKEVSNCGVWRMTYLDDSMRVLWASGGKNAKVENVYVLVK 350
BLAST of mRNA_L-elsbetiae_contig77.16636.1 vs. uniprot
Match: A0A7S0G154_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G154_9RHOD) HSP 1 Score: 88.6 bits (218), Expect = 2.080e-18 Identity = 45/119 (37.82%), Postives = 70/119 (58.82%), Query Frame = 2 Query: 212 TWNLVYTTTAGASGGKLGPFVGEVQQEVDIAEGLYINYVRVGPLTGELEATWEVVNKNQWKVVFKTIAFLLWGQQLVKKEL--GQAGLWTLSYLDNDMRVLTARSLERDTGN-LYVLAR 559 +W L YT++ S GK+GPFVG+V+Q++D+ + N +GPL +L ATW+V++ N + V+F T L+G + K G G W + Y D D+RVL + ++D L+VL R Sbjct: 94 SWYLEYTSSISTSSGKVGPFVGQVKQKIDLENRRFENICLLGPLKFDLGATWKVLDDNNFNVLFLTKEISLFGISVQKSPFPDGSGGFWRMGYTDEDLRVLWTKRFQKDKNEMLFVLRR 212 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig77.16636.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig77.16636.1 >prot_L-elsbetiae_contig77.16636.1 ID=prot_L-elsbetiae_contig77.16636.1|Name=mRNA_L-elsbetiae_contig77.16636.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=102bp PLLKARAHCALFDLKQAQDLKQTILTEAAGTSNGLKASQQQRDAISKAVNback to top mRNA from alignment at L-elsbetiae_contig77:36764..37786+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig77.16636.1 ID=mRNA_L-elsbetiae_contig77.16636.1|Name=mRNA_L-elsbetiae_contig77.16636.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1023bp|location=Sequence derived from alignment at L-elsbetiae_contig77:36764..37786+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig77:36764..37786+ >mRNA_L-elsbetiae_contig77.16636.1 ID=mRNA_L-elsbetiae_contig77.16636.1|Name=mRNA_L-elsbetiae_contig77.16636.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=612bp|location=Sequence derived from alignment at L-elsbetiae_contig77:36764..37786+ (Laminarionema elsbetiae ELsaHSoW15)back to top |