mRNA_L-elsbetiae_contig7685.16620.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig7685.16620.1
Unique NamemRNA_L-elsbetiae_contig7685.16620.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig7685.16620.1 vs. uniprot
Match: A0A6H5K092_9PHAE (2OG-FeII_Oxy_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K092_9PHAE)

HSP 1 Score: 313 bits (803), Expect = 2.570e-98
Identity = 249/481 (51.77%), Postives = 279/481 (58.00%), Query Frame = 1 
Query:    1 EKMEPPLSVCQRLFKQEDPEEEEGGEEGDGNCWLVLSASQRSSLRQRGFVVLDALAPAGLAAEAYEEAT---ARAASGSLAPAHGXXXXXXXXXTSHPGPHREDEGQAGXXXXXXXXXXXXXXXXXXXQLTGYVGSVRDDLTSFVSAEREAAAAACGAEGSGAGAVGRTLAILARLGEDLGRLVRLRGRVEHQLAVYPAGIGARYERHRDAYPDDAGYDDANDXXXSSTAGEVTG----------GSGGGSVSFRRVTAICYLRGSGAPWKAQDGGSLRLYPPAAATAASKSEPGEGNCDSRVVFNFASQLGLS----DKEYPQEQXXXXXXXXXXXXXXXXXXXTLNSGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGDEQ---------------------------------RQDFVDVAPLAGRAVVFLSGAVEHEVLPVTGTLPRAALTTWFH 1293
            +KMEPPLSVCQRL K      ++GG  GDG  WLVLS SQR+SL QRGF VLD LAPA LAA+AY+EA+   ARAASG LAPAHG             G H   EG                       LTGYV SVRDDLT+FVS+EREA   A GA  +GA  VGRTLAILARLGEDLGR+VRLRGRVEHQLAVYP+GIGARYERHRDAYPDD G +D ++   ++T GEV            G+ GGSVSFRR+TAICYLR +G PW+A DGG+LRLYPP A+  A + E   G+    VV   AS+L       D+   Q+Q                    +   D             XXXXXXXXXXXXXXXXXXX     XXXXXXXX     G+                                   RQ FVDV PLAGRAVVF SGAVEHEVLPVTG LPRAALTTWFH
Sbjct:   87 DKMEPPLSVCQRLLK------DDGG--GDGP-WLVLSDSQRASLSQRGFTVLDRLAPASLAADAYDEASFAIARAASGVLAPAHGSSGGGARSINGGCG-HETSEGDGALNEEGLKDEHAPAAAPG---LTGYVKSVRDDLTAFVSSEREAGRGARGAAETGA--VGRTLAILARLGEDLGRMVRLRGRVEHQLAVYPSGIGARYERHRDAYPDD-GEEDYDEDPPAATDGEVNANHNTKAEEAEGADGGSVSFRRITAICYLRRNGTPWQASDGGALRLYPPTASPLAQEEECDNGS-SGEVVCKLASRLDFEAEQEDRRQHQQQPDTRGPCSSDAAAATGGRDRVTGDDIDDGRAGGSSSCRXXXXXXXXXXXXXXXXXXXICHVSXXXXXXXXVATNTGESASSRDDWAXXXXXXXXXXXXXTNSGGDETGGEGTRQGFVDVPPLAGRAVVFFSGAVEHEVLPVTGQLPRAALTTWFH 550
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BLAST of mRNA_L-elsbetiae_contig7685.16620.1 vs. uniprot
Match: D8LHC0_ECTSI (2OG-FeII_Oxy_3 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHC0_ECTSI)

HSP 1 Score: 245 bits (625), Expect = 1.700e-72
Identity = 190/352 (53.98%), Postives = 210/352 (59.66%), Query Frame = 1 
Query:  379 LTGYVGSVRDDLTSFVSAEREAAAAACGAEGSGAG-AVGRTLAILARLGEDLGRLVRLRGRVEHQLAVYPAGIGARYERHRDAYPDDAGYDDANDXXXSSTAGEVTG----------GSGGGSVSFRRVTAICYLRGSGAPWKAQDGGSLRLYPPAAATAASKSEPGEGNCDSRVVFNFASQLGLS----DKEYPQEQXXXXXXXXXXXXXXXXXXXTL--------------------------------NSGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGDEQRQDFVDVAPLAGRAVVFLSGAVEHEVLPVTGTLPRAALTTWFH 1293
            LTGYV SVRDDLT FVS+EREA AAA          AVGRTLAILARLGEDLGR+VRLRGRVEHQLAVYPAGIGARYERHRDAYPDD G DD ++   ++T GEV            G+ GGSVSFRR+TAICYLR SGAPW+A DGG+LRLYPP A+  A + +   GN    VV+  AS L L+    D+   Q+Q                    +                                  GD      XXXXXXXXXXXXXX             XXXXXXXXXXXX     G+  RQ F+DV PLAGRAVVF SGAVEHEVLPVTG LPRAALTTWFH
Sbjct:  144 LTGYVKSVRDDLTVFVSSEREAGAAAXXXXXXXXXXAVGRTLAILARLGEDLGRMVRLRGRVEHQLAVYPAGIGARYERHRDAYPDD-GEDDYDEDPPAATDGEVNANHNTEAEEGEGADGGSVSFRRITAICYLRRSGAPWQASDGGALRLYPPTASPLAQEKQRDNGN-SGEVVWKLASWLDLAEEHEDRRQDQQQPTTRDRCSSDAAPAAGGRDAVVGDDIIDGRTGGSNSYRISSCRSGSGGEDGRTGGGDIGHGSGXXXXXXXXXXXXXXASSRDDWVGDGAQXXXXXXXXXXXXGNEAGGEGPRQGFIDVPPLAGRAVVFFSGAVEHEVLPVTGPLPRAALTTWFH 493
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BLAST of mRNA_L-elsbetiae_contig7685.16620.1 vs. uniprot
Match: A0A8H7SB18_9FUNG (Fe2OG dioxygenase domain-containing protein n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7SB18_9FUNG)

HSP 1 Score: 64.7 bits (156), Expect = 7.410e-8
Identity = 40/96 (41.67%), Postives = 50/96 (52.08%), Query Frame = 1 
Query:  517 LGEDLGRLVRLRGRVEHQLAVYPAGIGARYERHRDAYPDDAGYDDANDXXXSSTAGEVTGGSGGGSVSFRRVTAICYLRGSGAPWKAQDGGSLRLY 804
            L  D+ R++RLRG+ E+QLA Y    GARYERHRDA+P     DD +D                     RRVTAI YL      W  +DGG L++Y
Sbjct:  195 LHHDISRMIRLRGKTEYQLAQYKPENGARYERHRDAFP----TDDPDD------------------THQRRVTAIMYLNPG---WTQKDGGELKIY 265
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BLAST of mRNA_L-elsbetiae_contig7685.16620.1 vs. uniprot
Match: A0A077WM26_9FUNG (Fe2OG dioxygenase domain-containing protein n=1 Tax=Lichtheimia ramosa TaxID=688394 RepID=A0A077WM26_9FUNG)

HSP 1 Score: 64.7 bits (156), Expect = 8.270e-8
Identity = 39/96 (40.62%), Postives = 48/96 (50.00%), Query Frame = 1 
Query:  517 LGEDLGRLVRLRGRVEHQLAVYPAGIGARYERHRDAYPDDAGYDDANDXXXSSTAGEVTGGSGGGSVSFRRVTAICYLRGSGAPWKAQDGGSLRLY 804
            L  DL +++RL+GR E+QLAVY   +GARYERHRDA+P D   D                         RRVTAI YL      W    GG L++Y
Sbjct:  211 LHHDLSKMIRLKGRTEYQLAVYNPNMGARYERHRDAFPTDDPED----------------------THQRRVTAILYLNPG---WTPGHGGELKIY 281
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BLAST of mRNA_L-elsbetiae_contig7685.16620.1 vs. uniprot
Match: A0A7S1SWH8_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SWH8_9CHLO)

HSP 1 Score: 58.9 bits (141), Expect = 6.950e-6
Identity = 85/304 (27.96%), Postives = 107/304 (35.20%), Query Frame = 1 
Query:  397 SVRDDLTSFVSAEREAAAAACGAEGSGAGAVGRTLAILARLGEDLGRLVRLRGR-VEHQLAVYPAGIGARYERHRDAYPDDAGYDDANDXXXSSTAGEVTGGSGGGSVSFRRVTAICYLRGSGAPWKAQDGGSLRLYPPAAATAASKSEPGEGNCDSRVVFN--FASQLGLSDK----EYPQEQXXXXXXXXXXXXXXXXXXXTLNSGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGDEQRQDFVDVAPLAGRAVVFLSGAVEHEVLPVTGTLPRAALTTW 1287
            S R D+  FV           G EG    A+   L  +  L EDL ++V LR R  E+QLA Y  G GA Y+RHRDA P      D N+                     RR+T + Y   S   W+   GG+LRL+PP   TA   +E G        + N   AS  G +      + P                      +L+S                                                     DE     +DVAP+AGR VVFLSG V+HEVLP      R ALT W
Sbjct:  111 SARSDILRFVH---------LGQEGR---AIEGVLKRMEELQEDLRQVVHLRRRQAEYQLAHYK-GNGAFYKRHRDALP----CGDTNEDQ-------------------RRMTIVVYTNPS---WEEAQGGALRLWPPIRPTAPPNNENGVVRIHDLRLANGGAASSNGGAPNGNVVDAPHRLAVVNSNGNGNGHHADHDTLSLDSHSVDSFCSHGRFPLNLCTALPHVKLSE--------------------------DENGVGVMDVAPVAGRMVVFLSGCVDHEVLPSYSD--RIALTAW 347
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BLAST of mRNA_L-elsbetiae_contig7685.16620.1 vs. uniprot
Match: A0A5J4XQX8_9CHLO (2OG-Fe(II) Oxygenase (Fragment) n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XQX8_9CHLO)

HSP 1 Score: 57.4 bits (137), Expect = 1.530e-5
Identity = 70/278 (25.18%), Postives = 97/278 (34.89%), Query Frame = 1 
Query:  469 GSGAGAVGRTLAILARLGEDLGRLVRLRGR-VEHQLAVYPAGIGARYERHRDAYPDDAGYDDANDXXXSSTAGEVTGGSGGGSVSFRRVTAICYLRGSGAPWKAQDGGSLRLY-PPAAATAASKSEPGEGNCDSRVVFNFASQLGLSDKEY---PQEQXXXXXXXXXXXXXXXXXXXTLNSGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGDEQRQDFVDVAPLAGRAVVFLSGAVEHEVLPVTGTLPRAALTTW 1287
            G G  A    + +L  +  DL  ++ L  R  E+QLAVY  G G++Y +HRDA PDD                       G   + RRVTAI Y       W+  DGG LR++ PP A++ +    PG  +   +   +      LS       P                        N  D                                                   +   +  +D+AP++GR VVFLSGA++H VLP     PR ALT W
Sbjct:   65 GPGGSAGLHAMQLLQEVQADLHSVMHLEKRSAEYQLAVYVGG-GSQYVKHRDALPDD-----------------------GADPNQRRVTAILYANPD---WRPADGGHLRIWLPPGASSPSLSPLPGRTDEPQQSALDLPGGQHLSAATASGSPHTNGKVASQQHAPQCQEVQHSAHSNYSDAVPGHLLTEPCDRRSPSIHIQ------------------------------EVNGERVLDIAPVSGRLVVFLSGAIDHAVLPSHN--PRVALTAW 283
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BLAST of mRNA_L-elsbetiae_contig7685.16620.1 vs. uniprot
Match: A0A4P9W476_9FUNG (Fe2OG dioxygenase domain-containing protein n=1 Tax=Blyttiomyces helicus TaxID=388810 RepID=A0A4P9W476_9FUNG)

HSP 1 Score: 55.8 bits (133), Expect = 5.120e-5
Identity = 38/102 (37.25%), Postives = 47/102 (46.08%), Query Frame = 1 
Query:  499 LAILARLGEDLGRLVRLRGRVEHQLAVYPAGIGARYERHRDAYPDDAGYDDANDXXXSSTAGEVTGGSGGGSVSFRRVTAICYLRGSGAPWKAQDGGSLRLY 804
            +A L  L   LG+ + + G  E QLA Y  G G RYERHRDA+P+D   D                         RR+TAICY   S   W   DGG LR++
Sbjct:  171 VAKLEELQTRLGKTIHMNGTAEFQLACYE-GNGGRYERHRDAFPNDDPTD----------------------TEQRRITAICYTGPS--TWTPADGGELRIH 247
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BLAST of mRNA_L-elsbetiae_contig7685.16620.1 vs. uniprot
Match: A0A433P730_9FUNG (2OG-Fe(II) oxygenase superfamily-domain-containing protein n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433P730_9FUNG)

HSP 1 Score: 53.5 bits (127), Expect = 7.320e-5
Identity = 47/137 (34.31%), Postives = 59/137 (43.07%), Query Frame = 1 
Query:  394 GSVRDDLTSFVSAEREAAAAACGAEGSGAGAVGRTLAILARLGEDLGRLVRLRGRVEHQLAVYPAGIGARYERHRDAYPDDAGYDDANDXXXSSTAGEVTGGSGGGSVSFRRVTAICYLRGSGAPWKAQDGGSLRLY 804
            G+ RDDLT ++   +            G  A+   L++   L  DL  L+ L    E+QLA YP   GARYERHRDA+P D   D                         RRVT+I YL      W   DGG LRL+
Sbjct:   19 GTARDDLTMWLHPGQVPT--------PGLSALAHFLSVT--LKSDLHYLLHLANETEYQLAYYPPN-GARYERHRDAFPTDDPAD----------------------TQQRRVTSIVYLNPG---WINGDGGELRLF 119
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7685.16620.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6H5K092_9PHAE2.570e-9851.772OG-FeII_Oxy_3 domain-containing protein n=1 Tax=E... [more]
D8LHC0_ECTSI1.700e-7253.982OG-FeII_Oxy_3 domain-containing protein n=1 Tax=E... [more]
A0A8H7SB18_9FUNG7.410e-841.67Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
A0A077WM26_9FUNG8.270e-840.63Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
A0A7S1SWH8_9CHLO6.950e-627.96Hypothetical protein n=1 Tax=Tetraselmis chuii Tax... [more]
A0A5J4XQX8_9CHLO1.530e-525.182OG-Fe(II) Oxygenase (Fragment) n=1 Tax=Trebouxia ... [more]
A0A4P9W476_9FUNG5.120e-537.25Fe2OG dioxygenase domain-containing protein n=1 Ta... [more]
A0A433P730_9FUNG7.320e-534.312OG-Fe(II) oxygenase superfamily-domain-containing... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7685contigL-elsbetiae_contig7685:3221..7268 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeOpisthokonta
Seed ortholog score62.0
Seed ortholog evalue7.8e-07
Seed eggNOG ortholog72019.SARC_09383T0
Preferred nameEGLN1
KEGG koko:K09592
KEGG Pathwayko04066,ko05200,ko05211,map04066,map05200,map05211
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000302,GO:0001558,GO:0001666,GO:0001701,GO:0001890,GO:0001892,GO:0003006,GO:0003007,GO:0003205,GO:0003206,GO:0003231,GO:0003279,GO:0003281,GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006082,GO:0006355,GO:0006357,GO:0006464,GO:0006520,GO:0006575,GO:0006611,GO:0006807,GO:0006810,GO:0006873,GO:0006875,GO:0006879,GO:0006886,GO:0006913,GO:0006950,GO:0006979,GO:0007154,GO:0007165,GO:0007275,GO:0007507,GO:0007517,GO:0008104,GO:0008144,GO:0008150,GO:0008152,GO:0008198,GO:0008270,GO:0009628,GO:0009653,GO:0009719,GO:0009725,GO:0009755,GO:0009790,GO:0009792,GO:0009887,GO:0009888,GO:0009889,GO:0009891,GO:0009893,GO:0009894,GO:0009896,GO:0009966,GO:0009968,GO:0009987,GO:0010033,GO:0010035,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0010646,GO:0010648,GO:0010941,GO:0010942,GO:0014070,GO:0014706,GO:0015031,GO:0015833,GO:0016491,GO:0016705,GO:0016706,GO:0018126,GO:0018193,GO:0018208,GO:0018401,GO:0019219,GO:0019222,GO:0019471,GO:0019511,GO:0019538,GO:0019725,GO:0019752,GO:0019825,GO:0019826,GO:0019899,GO:0022414,GO:0022603,GO:0023051,GO:0023052,GO:0023057,GO:0030003,GO:0030307,GO:0030425,GO:0030518,GO:0030520,GO:0030522,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031543,GO:0031545,GO:0031974,GO:0031981,GO:0032364,GO:0032501,GO:0032502,GO:0032870,GO:0032879,GO:0032880,GO:0033036,GO:0033483,GO:0033554,GO:0033993,GO:0034613,GO:0036094,GO:0036211,GO:0036293,GO:0036294,GO:0036477,GO:0040008,GO:0042176,GO:0042221,GO:0042493,GO:0042592,GO:0042886,GO:0042981,GO:0042995,GO:0043005,GO:0043009,GO:0043065,GO:0043067,GO:0043068,GO:0043086,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043401,GO:0043412,GO:0043433,GO:0043436,GO:0043523,GO:0043618,GO:0043620,GO:0044092,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044463,GO:0044464,GO:0045184,GO:0045454,GO:0045732,GO:0045765,GO:0045893,GO:0045927,GO:0045935,GO:0045944,GO:0046872,GO:0046907,GO:0046914,GO:0046916,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048545,GO:0048568,GO:0048583,GO:0048585,GO:0048608,GO:0048644,GO:0048646,GO:0048729,GO:0048731,GO:0048738,GO:0048856,GO:0048878,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050801,GO:0050848,GO:0050849,GO:0050896,GO:0051090,GO:0051128,GO:0051168,GO:0051169,GO:0051171,GO:0051173,GO:0051179,GO:0051213,GO:0051234,GO:0051239,GO:0051246,GO:0051247,GO:0051252,GO:0051254,GO:0051336,GO:0051342,GO:0051344,GO:0051346,GO:0051641,GO:0051649,GO:0051716,GO:0055008,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0055114,GO:0060255,GO:0060343,GO:0060347,GO:0060411,GO:0060412,GO:0060415,GO:0060537,GO:0060711,GO:0061061,GO:0061383,GO:0061384,GO:0061418,GO:0061458,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070482,GO:0070727,GO:0070887,GO:0071310,GO:0071383,GO:0071396,GO:0071407,GO:0071453,GO:0071456,GO:0071495,GO:0071702,GO:0071704,GO:0071705,GO:0071731,GO:0072359,GO:0080090,GO:0097366,GO:0097447,GO:0097458,GO:0098771,GO:0120025,GO:0120038,GO:0140096,GO:1901214,GO:1901216,GO:1901342,GO:1901564,GO:1901605,GO:1901698,GO:1901700,GO:1902531,GO:1902532,GO:1902680,GO:1903506,GO:1903508,GO:1905289,GO:1905290,GO:2000026,GO:2000112,GO:2001141
EggNOG free text desc.Egl nine homolog
EggNOG OGs38C21@33154,KOG3710@1,KOG3710@2759
EC1.14.11.29
COG Functional cat.T
Best tax levelOpisthokonta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Ec32 ortholog descriptionexpressed unknown protein
Ec32 orthologEc-24_001320.1
Exons5
Model size1296
Cds size1290
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7685.16620.1prot_L-elsbetiae_contig7685.16620.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig7685 3221..7262 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816853.5700185-CDS-L-elsbetiae_contig7685:3220..38791622816853.5700185-CDS-L-elsbetiae_contig7685:3220..3879Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7685 3221..3879 -
1691683862.9435573-CDS-L-elsbetiae_contig7685:3220..38791691683862.9435573-CDS-L-elsbetiae_contig7685:3220..3879Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7685 3221..3879 -
1622816853.5843709-CDS-L-elsbetiae_contig7685:4791..48581622816853.5843709-CDS-L-elsbetiae_contig7685:4791..4858Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7685 4792..4858 -
1691683862.957091-CDS-L-elsbetiae_contig7685:4791..48581691683862.957091-CDS-L-elsbetiae_contig7685:4791..4858Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7685 4792..4858 -
1622816853.6000166-CDS-L-elsbetiae_contig7685:5358..56481622816853.6000166-CDS-L-elsbetiae_contig7685:5358..5648Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7685 5359..5648 -
1691683862.9679062-CDS-L-elsbetiae_contig7685:5358..56481691683862.9679062-CDS-L-elsbetiae_contig7685:5358..5648Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7685 5359..5648 -
1622816853.6198645-CDS-L-elsbetiae_contig7685:5690..57691622816853.6198645-CDS-L-elsbetiae_contig7685:5690..5769Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7685 5691..5769 -
1691683862.9783864-CDS-L-elsbetiae_contig7685:5690..57691691683862.9783864-CDS-L-elsbetiae_contig7685:5690..5769Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7685 5691..5769 -
1622816853.6342347-CDS-L-elsbetiae_contig7685:7067..72621622816853.6342347-CDS-L-elsbetiae_contig7685:7067..7262Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7685 7068..7262 -
1691683862.9886386-CDS-L-elsbetiae_contig7685:7067..72621691683862.9886386-CDS-L-elsbetiae_contig7685:7067..7262Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7685 7068..7262 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816853.6436403-UTR-L-elsbetiae_contig7685:7262..72681622816853.6436403-UTR-L-elsbetiae_contig7685:7262..7268Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7685 7263..7268 -
1691683863.0067537-UTR-L-elsbetiae_contig7685:7262..72681691683863.0067537-UTR-L-elsbetiae_contig7685:7262..7268Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7685 7263..7268 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig7685.16620.1

>prot_L-elsbetiae_contig7685.16620.1 ID=prot_L-elsbetiae_contig7685.16620.1|Name=mRNA_L-elsbetiae_contig7685.16620.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=430bp
MEPPLSVCQRLFKQEDPEEEEGGEEGDGNCWLVLSASQRSSLRQRGFVVL
DALAPAGLAAEAYEEATARAASGSLAPAHGGGGGGTSISTSHPGPHREDE
GQAGGRQSSTTAPPPPPPPPPPPQLTGYVGSVRDDLTSFVSAEREAAAAA
CGAEGSGAGAVGRTLAILARLGEDLGRLVRLRGRVEHQLAVYPAGIGARY
ERHRDAYPDDAGYDDANDDDESSTAGEVTGGSGGGSVSFRRVTAICYLRG
SGAPWKAQDGGSLRLYPPAAATAASKSEPGEGNCDSRVVFNFASQLGLSD
KEYPQEQEQEKQEKQEQGQELQQQQRTLNSGDGSGGGRGGDVGEGDGDSG
GSDGDGAGDGDGASGGGGGGGGGRGGDRSGDRGDEQRQDFVDVAPLAGRA
VVFLSGAVEHEVLPVTGTLPRAALTTWFH*
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mRNA from alignment at L-elsbetiae_contig7685:3221..7268-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig7685.16620.1 ID=mRNA_L-elsbetiae_contig7685.16620.1|Name=mRNA_L-elsbetiae_contig7685.16620.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4048bp|location=Sequence derived from alignment at L-elsbetiae_contig7685:3221..7268- (Laminarionema elsbetiae ELsaHSoW15)
GAAAAGATGGAGCCCCCGCTGTCAGTCTGCCAGCGGCTGTTCAAGCAAGA
AGACCCTGAAGAGGAGGAGGGGGGGGAGGAGGGAGATGGCAACTGCTGGC
TCGTGCTATCGGCGAGCCAGCGCTCTTCTCTCAGGCAGCGCGGGTTTGTC
GTGTTGGATGCTCTCGCTCCGGCAGGCCTTGCCGCTGAGGCCTACGAGGA
GGTGAACTAACTTGAGATAGGGGGGCGCACGTATAGCCTTCGTACATCTC
GTCTCCTAAAAGTCGGAAGATGCTTATTGACTTGGATTTGTATGGATTAA
TTAAATTTGGCTCTGCGTGCAACTGTTGGAAATCATGGTTGGCAGGTGAG
AGGAACCCAGATCGAACTGTTCCTCCGCGCAGGTTACAGAAAACGCCAGT
ACGCACCCACCCGCCGGGCTGCACTGCTTTATATATACGCATACGTGCTT
CGTACGATCGGAAATTCTTCTGCGCGCTCTGAACGCCTTCCGGAGAGAAA
CCGCGGGGGGGAGAGGGAGACAAGGGGGGAGAGAGAGAGAGAGAGAGAGA
GGGAGAGAACTGAAAGAAACCAAACCTTGTTCCCGATCGGGTTCGGAGGA
AACTGCCGCCGCCGATGCTCTGGCAAAGCGTGGCCCTTCTTGTAGCATCT
GCCATTTAGACTCCAGTCAAGGGTGGCGGCGGCGGCAAGAACGCAGTGCG
TAGTTTTTTATTTCTGGAAAGTTCGACGTTAAACCTGAGCGGTAATTTTC
ACCTCTTCCAATCCCCTTTTTCTCGCCCGACATCTTTGTTTTTTTGGTCC
TCAAGCGGACTGGAAGAAACCCCGAAAATCATTTCGCTCATGTGAATCTA
GATGGGACGCTCTCCCTTCACCACGCATCAACAGCCGTCACTCTTGTTCT
CTTCTAAGGGAGCACCTAACGTTAAGGGTCGTTTTTCTTAGGTAAAAGTA
TGCAGTCTACGTAGGGCTACAAACATCGGGCCAACCCCACCGCACCCCTT
AACTCTAATAAATACATGGCCGTTGAATCGTTCGTCATCACGTTGAGTCG
TTCGTTCAAAAATGACGCACGTACAACGTAGTATATGTCTGTTGAAACGT
CGCCGTGCTTTTGCTTTCCTGCTCTTCTTTTCCCCTCCGGTACTGATTAC
ACCGTGATAGTAGATCTTTAGGAGTACGCCATATGCGTCCTCTGATTGGT
CAAAGCGTGTGTGCGGGACCACGTTCTGACCTGCGGCGGACCACGCGCCC
CGCGAAAGCGGCGATTGAGCCGCGTTCGCGGCGTTTTCTCGGCCCCACGG
CCCCGGTTGGACGTCGGTGCGGGTTGGGGTTTAGGGTCAGGGCTGGGTTG
GGTCGGTCACGTGTGTGTCTTCTGGGTTCTGAGTTTGAACCGTCTGCAAA
AACATCGTGTTATGTAGCGGTAGAGAGCTAATATCAGTGTGCCACCCAAC
CCCCTCCCCTCCCCTCCCTGCTCCTCCGCTCCTTCCGCTCGCCCTCCAGG
CCACCGCCAGAGCGGCGTCGGGGTCCCTCGCTCCCGCCCACGGCGGCGGC
GGCGGCGGCACCAGTATCAGCACAAGCCGTGGCACGGCGTTGCCCCCTTC
CGCCGACACCAACGACGGAGACCCGGGGCCCCACCGCGAAGACGAGGGTC
AAGCGGGCGGGCGGCAGTCGTCGACTACAGCGCCGCCGCCGCCGCCGCCG
CCGCCGCCACCGCCGCAGTTGACGGGCTATGTAGGGTCCGTGAGGGACGA
CCTAACGTCGTTCGTCTCCGCCGAGCGGGAAGCGGCGGCGGCGGCGTGCG
GCGCCGAGGGATCAGGAGCCGGGGCCGTCGGTAGGACTCTTGCTATCCTG
GCGAGGCTTGGGGAGGATTTGGGGCGGTTGGTCCGCCTGAGAGGGCGCGT
GGAGCACCAGGTACGGCGGCACCCCTTAGGCCCAGGTATCGGCTGCCGGC
GGCGGCACCATGTACCGTATACGGCACAAGATAGCACACCCCGTGGGCCA
GTTTTCAAAGCTCAAGTACTCCACAGCGAGAAGAGTGCCAGTCCCGAAAA
GGACGGCGTTGGAAAGATCTCATCAAGAGCTGTTCGAAAACGCGTCGTTT
GGCATCAGAGTCATACTCGTTGCGGAGTAACCGAGCCTTGAAAAGCGGTC
AAGGGGGTGTGCTATATTGTGTCGTATGGCTTAGCTGGCTGTTGGTAGAC
TATGTGGCAAAGGCTGGCGCTGGCGCTTCTGCTGGGCTCGGCCCGAGAGC
GTATCTTTTTTTTTTGCAACTGCATATTTGCTTGTTTATTTTGTAGTTGA
ATATTTACGCACAGTCGGTTTTGGGGACTTCCTTGTGAGATTTGATTTCA
CCCCCCCCCCCCACCGCGCACACCCCGTTGCCTACCTACTCCATGCTTTT
ATGTTTGCAGTTAGCGGTGTACCCGGCGGGGATCGGCGCGCGGTACGAGA
GGCACCGGGACGCCTACCCCGACGATGGTAGGCTTGATATATTATCGCCT
CCTGATTGATGCATGGTTCTGTGTCCTCGACCGGTTCTAAAACTTGAACC
GGTTTTAGAACCACTATATTTGTCTCAAGTCTCAAGCCGTGTTTTATCCT
CCAAGCACTCCCCGGGGATGGTTCGAAAAAGGGGTTGCAAAGTGCCGGCA
GAAACCATTGAAGAAACTCTGTCGCACACGACTTACTAAGCAGGTTTCTC
GGGTCTTGTATGTATGTAAATACTGTATGCACCCCGTTCACGGAGCACCG
CATCTTGATCTCTTCGTTTCGCAACAACTTGAAGCGAAAGGACCTGTCCT
CACTTTGTGTCCGGCGTGAGGCCCCAAACGTGGTGGCACTCCACCTAAGA
AAAAGTGAAACGAACGGCGCCGGAAATACCGCTCGACCAGCAAATCCCCG
AACCGTATCTTGCCCGCGGTCGCCTGATATGTCTGCCGGTCTCTTGTGTC
TGCCGGTCTCTTGTGTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
GTGCGTGTGTTGTCTTCACAATAAAAACCGTTCCGATCTCTCTTTCCAGT
ACACCTCCTTGGGTCCGTACTTATCCAATACTGACGCGATCGATTCCCGT
GGTCACAGGCAGGGTAACTTACCCTAAAGCGGGTACATATGTATATACTC
TGTAAAATGAAACGAAGCAAAATGGACCCGAAGGTTCCACAAAGCACAGA
AAAACAAAAGATCACAGGTGTCTGGTCTGGAGGCCTCCGCTCCCCTCCCT
CTACACGGTATGTGAGGTGAAAAAAAAAGTGGAAAAGCCTACATCACCAA
CCGCTGGGGGTACACCCCCTGGTTCTATCTTGGTAAATGCCCCAACAATT
TGTATATACGATGCACTCCAATATACGTCAAACAATGAGCAGGTTACGAC
GACGCCAACGACGACGACGAAAGCAGCACCGCCGGAGAGGTCACGGGTGG
CAGCGGGGGCGGAAGCGTGAGCTTCCGCAGGGTAACAGCAATCTGCTACC
TCCGGGGGAGTGGGGCCCCGTGGAAGGCGCAGGACGGAGGGTCTCTTCGC
CTGTACCCCCCCGCCGCCGCCACTGCTGCTTCGAAGAGCGAGCCAGGCGA
GGGCAACTGCGACAGCCGGGTAGTGTTTAACTTCGCCTCACAGCTCGGGC
TCTCGGACAAAGAGTACCCGCAGGAACAGGAGCAGGAGAAGCAGGAGAAG
CAGGAGCAGGGGCAGGAGCTGCAGCAACAACAGCGCACGCTCAACTCAGG
CGACGGTAGCGGCGGCGGCCGCGGGGGCGACGTTGGAGAAGGCGATGGCG
ATAGCGGTGGTAGCGATGGCGATGGTGCTGGCGATGGCGATGGCGCTAGC
GGTGGCGGTGGTGGTGGCGGTGGCGGTAGGGGGGGCGACAGAAGTGGAGA
CAGAGGCGATGAGCAGCGGCAAGATTTCGTTGACGTTGCGCCCCTGGCCG
GACGTGCGGTCGTTTTCTTGAGCGGCGCGGTAGAGCACGAGGTGCTTCCA
GTCACGGGGACTCTACCGAGAGCCGCTTTGACAACGTGGTTTCACTGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig7685:3221..7268-

>mRNA_L-elsbetiae_contig7685.16620.1 ID=mRNA_L-elsbetiae_contig7685.16620.1|Name=mRNA_L-elsbetiae_contig7685.16620.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2580bp|location=Sequence derived from alignment at L-elsbetiae_contig7685:3221..7268- (Laminarionema elsbetiae ELsaHSoW15)
ATGGAGCCCCCGCTGTCAGTCTGCCAGCGGCTGTTCAAGCAAGAAGACCC
TGAAGAGGAGGAGGGGGGGGAGGAGGGAGATGGCAACTGCTGGCTCGTGC
TATCGGCGAGCCAGCGCTCTTCTCTCAGGCAGCGCGGGTTTGTCGTGTTG
GATGCTCTCGCTCCGGCAGGCCTTGCCGCTGAGGCCTACGAGGAGATGGA
GCCCCCGCTGTCAGTCTGCCAGCGGCTGTTCAAGCAAGAAGACCCTGAAG
AGGAGGAGGGGGGGGAGGAGGGAGATGGCAACTGCTGGCTCGTGCTATCG
GCGAGCCAGCGCTCTTCTCTCAGGCAGCGCGGGTTTGTCGTGTTGGATGC
TCTCGCTCCGGCAGGCCTTGCCGCTGAGGCCTACGAGGAGGCCACCGCCA
GAGCGGCGTCGGGGTCCCTCGCTCCCGCCCACGGCGGCGGCGGCGGCGGC
ACCAGTATCAGCACAAGCCGCCACCGCCAGAGCGGCGTCGGGGTCCCTCG
CTCCCGCCCACGGCGGCGGCGGCGGCGGCACCAGTATCAGCACAAGCCAC
CCGGGGCCCCACCGCGAAGACGAGGGTCAAGCGGGCGGGCGGCAGTCGTC
GACTACAGCGCCGCCGCCGCCGCCGCCGCCGCCGCCACCGCCGCAGTTGA
CGGGCTATGTAGGGTCCGTGAGGGACGACCTAACGTCGTTCGTCTCCGCC
GAGCGGGAAGCGGCGGCGGCGGCGTGCGGCGCCGAGGGATCAGGAGCCGG
GGCCGTCGGTAGGACTCTTGCTATCCTGGCGAGGCTTGGGGAGGATTTGG
GGCGGTTGGTCCGCCTGAGAGGGCGCGTGGAGCACCAGACCCGGGGCCCC
ACCGCGAAGACGAGGGTCAAGCGGGCGGGCGGCAGTCGTCGACTACAGCG
CCGCCGCCGCCGCCGCCGCCGCCGCCACCGCCGCAGTTGACGGGCTATGT
AGGGTCCGTGAGGGACGACCTAACGTCGTTCGTCTCCGCCGAGCGGGAAG
CGGCGGCGGCGGCGTGCGGCGCCGAGGGATCAGGAGCCGGGGCCGTCGGT
AGGACTCTTGCTATCCTGGCGAGGCTTGGGGAGGATTTGGGGCGGTTGGT
CCGCCTGAGAGGGCGCGTGGAGCACCAGTTAGCGGTGTACCCGGCGGGGA
TCGGCGCGCGGTACGAGAGGCACCGGGACGCCTACCCCGACGATGTTAGC
GGTGTACCCGGCGGGGATCGGCGCGCGGTACGAGAGGCACCGGGACGCCT
ACCCCGACGATGCAGGTTACGACGACGCCAACGACGACGACGAAAGCAGC
ACCGCCGGAGAGGTCACGGGTGGCAGCGGGGGCGGAAGCGTGAGCTTCCG
CAGGGTAACAGCAATCTGCTACCTCCGGGGGAGTGGGGCCCCGTGGAAGG
CGCAGGACGGAGGGTCTCTTCGCCTGTACCCCCCCGCCGCCGCCACTGCT
GCTTCGAAGAGCGAGCCAGGCGAGGGCAACTGCGACAGCCGGGTAGTGTT
TAACTTCGCCTCACAGCTCGGGCTCTCGGACAAAGAGTACCCGCAGGAAC
AGGAGCAGGAGAAGCAGGAGAAGCAGGAGCAGGGGCAGGAGCTGCAGCAA
CAACAGCGCACGCTCAACTCAGGCGACGGTAGCGGCGGCGGCCGCGGGGG
CGACGTTGGAGAAGGCGATGGCGATAGCGGTGGTAGCGATGGCGATGGTG
CTGGCGATGGCGATGGCGCTAGCGGTGGCGGTGGTGGTGGCGGTGGCGGT
AGGGGGGGCGACAGAAGTGGAGACAGAGGCGATGAGCAGCGGCAAGATTT
CGTTGACGTTGCGCCCCTGGCCGGACGTGCGGTCGTTTTCTTGAGCGGCG
CGGTAGAGCACGAGGTGCTTCCAGTCACGGGGACTCTACCGAGAGCCGCT
TTGACAACGTGGTTTCACTGACAGGTTACGACGACGCCAACGACGACGAC
GAAAGCAGCACCGCCGGAGAGGTCACGGGTGGCAGCGGGGGCGGAAGCGT
GAGCTTCCGCAGGGTAACAGCAATCTGCTACCTCCGGGGGAGTGGGGCCC
CGTGGAAGGCGCAGGACGGAGGGTCTCTTCGCCTGTACCCCCCCGCCGCC
GCCACTGCTGCTTCGAAGAGCGAGCCAGGCGAGGGCAACTGCGACAGCCG
GGTAGTGTTTAACTTCGCCTCACAGCTCGGGCTCTCGGACAAAGAGTACC
CGCAGGAACAGGAGCAGGAGAAGCAGGAGAAGCAGGAGCAGGGGCAGGAG
CTGCAGCAACAACAGCGCACGCTCAACTCAGGCGACGGTAGCGGCGGCGG
CCGCGGGGGCGACGTTGGAGAAGGCGATGGCGATAGCGGTGGTAGCGATG
GCGATGGTGCTGGCGATGGCGATGGCGCTAGCGGTGGCGGTGGTGGTGGC
GGTGGCGGTAGGGGGGGCGACAGAAGTGGAGACAGAGGCGATGAGCAGCG
GCAAGATTTCGTTGACGTTGCGCCCCTGGCCGGACGTGCGGTCGTTTTCT
TGAGCGGCGCGGTAGAGCACGAGGTGCTTCCAGTCACGGGGACTCTACCG
AGAGCCGCTTTGACAACGTGGTTTCACTGA
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