mRNA_L-elsbetiae_contig7679.16608.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig7679.16608.1
Unique NamemRNA_L-elsbetiae_contig7679.16608.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig7679.16608.1 vs. uniprot
Match: A0A6H5LAW1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LAW1_9PHAE)

HSP 1 Score: 600 bits (1548), Expect = 2.950e-210
Identity = 318/429 (74.13%), Postives = 356/429 (82.98%), Query Frame = 1
Query:    1 MWLRVLSVILCTTGAGGFYLSFSRPTHLATLGLKPCTTTSGA-CHASRCPRSRFPATTTSR---------MMMMAGPNQGQKPGFFADWPVLEAELKAYLAERQAGNPENSGD-VKPRGAGGALLNFLSVNPTEMALENEPDKDEWDGEADVLSYSELTRYGYGYLIEPMMNSGGYVAASERMGIDLNTRTLKDNEYYERVNPTVGLDMNKKADKDGFLTLGSAREERLNSVANVDREERKKSLFEKQAMMDKNAKAEKSAARQAGLLNPKRKTPVSLGGRTQKELDEELYRKPGLPEEQRDISEWVPAVRAEDAGPPQPLLLNFAQRANAVAVCGCLALAFGKGTVDALETGLLPREVAEIAVPASLFLLGLNVASAAVGASIAKSKARSVPLWVFKGALAGLPSVLELKGLPELVPTLVGSQESSGS 1254
            MWL V++ ILC  GAGGFY+    PT      LKP  T+S + CHA RC R R P               ++MMAGPNQGQKPGFFA+WPVLEAE++AYL ERQAG+PE  G  V+ +GAGG LLNFLSVNPT+MALENEPD+DEWDGE +VLSYSELTRYGYGYLIEPMM  GGYVAASERMGIDLN RTLKDNEYYER NPTVGLD+ KKADKDGFLTLGSA+EERLNSVANV RE+R+KSLFEKQAMMDK  KA+K+A +++ +LN  RK PV+LGGR+QKE+DEE++RKPGL  EQRDISEWVP VRAEDA P QPLLLNFAQRANAVAVCGCL+LAFGKGT+DALETGLLPR+VAE AVPASLFLLGLNVASA  GASIAK+K RSVPLWVFKGALAGL SVLELKGLPELVP  +GS  S+ +
Sbjct:    6 MWLPVITAILCVAGAGGFYVRTIAPT----ASLKPSPTSSSSRCHA-RCSRRRLPTXXXXXXXXXXXXRTIVMMAGPNQGQKPGFFAEWPVLEAEIRAYLDERQAGDPEKGGGGVESKGAGGTLLNFLSVNPTQMALENEPDRDEWDGEVNVLSYSELTRYGYGYLIEPMMKIGGYVAASERMGIDLNARTLKDNEYYERTNPTVGLDIQKKADKDGFLTLGSAKEERLNSVANVSREDRRKSLFEKQAMMDKKTKAKKAATKKSRVLNTSRKVPVNLGGRSQKEVDEEIFRKPGLTAEQRDISEWVPEVRAEDALPAQPLLLNFAQRANAVAVCGCLSLAFGKGTLDALETGLLPRDVAEAAVPASLFLLGLNVASAVAGASIAKNKGRSVPLWVFKGALAGLTSVLELKGLPELVP--LGSSSSASA 427          
BLAST of mRNA_L-elsbetiae_contig7679.16608.1 vs. uniprot
Match: A0A835Z3J1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3J1_9STRA)

HSP 1 Score: 128 bits (322), Expect = 1.190e-29
Identity = 102/310 (32.90%), Postives = 148/310 (47.74%), Query Frame = 1
Query:  355 VNPTEMALENEPDKD-----EWDGEADVLSYSELTRYGYGYLIEPMMNSGGYVAASERMGIDLNTRTLKDNEYYERVNPTVGLDMNKKAD-KDGFLTLGSAREERLNSVANVDRE---ERKKSLFEKQAMMDKNAKAEKSAARQAGLLNPKRKTPVSLGGRTQKELDEELYRKPGLPEEQRDISEWVPAVRAEDAGPPQPLLLNFAQRANAVAVCGCLALAFGKGTVDALETGLLPREVAEIAVPASLFLLGLNVASAAVGASIAKSKARSVPLWVFKGALAGLPSVLELKGLPELVPTLVGSQESSGSS 1257
            +NP+ +   +  D D     EWDG  D L YSEL  YGY YL+EP+MN+GGY+A S R+G+ +  ++ +    +    P     + + +D K+GFL LGSA +ER+ + A    +   ER   LFEKQA+MD + +A +  A +A  +  +R  P  +  R       +      LP E+                    + L+  QRA  +A     A+ FG+GT  A++ GL P    + A      LL  N  SA + A +A    R V  W  KGALAG  SV EL+GL  +   +      S SS
Sbjct:   10 INPSAIGRPDRFDDDFEEPVEWDGAPDPLEYSELRAYGYQYLVEPIMNAGGYIAVSNRLGVHVTPKSRRRRAAFA---PGEEPKLLRPSDAKEGFLALGSALDERMEAAAAAAPQRAAERSARLFEKQALMDADERAARRDAAEAAPVY-RRAAPEVVAARAAXXXXXDXADAAALPRER--------------------IGLSALQRAYVLATAVSAAVGFGRGTPAAVDVGL-PEAAVQAAAAVGFALLLANAGSAVLSARMASRGGRGVVHWALKGALAGPVSVAELRGLVGVEGVVQAGSGGSDSS 294          
BLAST of mRNA_L-elsbetiae_contig7679.16608.1 vs. uniprot
Match: A0A6V2IIN7_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2IIN7_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 2.160e-11
Identity = 110/393 (27.99%), Postives = 176/393 (44.78%), Query Frame = 1
Query:  160 PATTTSRMMMMAGPNQGQKPGFFADWPVLEAELKAYLAERQAGNPENS-----GDVKPRGAGGALLNFLSVNPT-EMALENEPDKDEWDGEADVLSYSELTRYGYGYLIEPMMNSGGYVAASERMGI---DLNTRTLKDNEYYERVNPTVGLDMNKKADKDGFLTLGSAREERLNSVANVDREERKKSLFEKQAMMDKNAKAEKSAARQAGLLNPKRKTPVS----LGGR-----TQKELDEELYRKPGLPEEQRDISEWVPAVRAEDA----GPPQPLLLNFAQRANAVAVCGCLALAFGKGTVDAL---------ETGLLPREVAEIAVPASLFLLGLNVASAAV-GASIAKSKARSVPLWVFKGALAGLPSVLELKGLPELVPTLVGSQE 1242
            P++ +S +++++    G       D   L+ EL AYL +R+  N + +     G +     G A+L F+S +P  E  +E  P+            Y E+T+YGYGYL++P+MN+GG  A  + M +    ++TR  K     + V     +D   K DK  +  L      ++  + + D   R        A+M+ N KA++  + +  LL  + + P +    +G R     T +++DE   RK G      +  EW  A RA D        +   +  + R  A   C  ++ AFG+ T  AL         E GLL   +  + VPA L L+   + S+ V G  +A  K RS   W  KG L G  +VL+L+ L E + T   SQE
Sbjct:   61 PSSFSSSLVVLSAGADGTD----VDLEGLKEELTAYLKKREEMNADEAAKEQIGKIVGGTKGNAVLEFVSGSPNKEYKIEEVPN---------AFDYDEITKYGYGYLVKPIMNAGGRRAMYKLMNMPEPSISTRLTKPKSARKLV-----IDREGKEDKARYSGL------KMTQMLDDDAMAR--------ALMEANEKAKRGESLRKKLLEEEYEMPFADKRNVGPRQTPDWTPEKIDE-ANRKRG------EALEW--ARRARDGEFRKDDDERAAVEGSLRIYASIACLFVSFAFGRSTPAALSLAGINASGEGGLL---LDILQVPA-LALVAAGIGSSIVSGVVLAPGKNRSSLTWFLKGLLGGPLAVLKLREL-ERLKTRGESQE 407          
BLAST of mRNA_L-elsbetiae_contig7679.16608.1 vs. uniprot
Match: B7FW49_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FW49_PHATC)

HSP 1 Score: 76.6 bits (187), Expect = 2.790e-11
Identity = 100/356 (28.09%), Postives = 159/356 (44.66%), Query Frame = 1
Query:  232 DWPVLEAELKAYLAERQ-AGNPENS----GDVKPRGAGGALLNFLSVNPTEMALENEPDKDEWDGEADVLSYSELTRYGYGYLIEPMMNSGGYVAASERMGIDLNT--RTLKDNEYYERVNPTVGLDMNKKADKDGFLTLGSAREERLNSVANVDREERKKSLFEKQAMMDKNAKAEKSAARQAGLLNP----KRKTPVSLGGRTQKELDEELYRKPGLPEEQRDISEWVPAVRAED--AGPPQPLLLNFAQRANAVAVCGCLALAFGKGTVDALETGLLPREVAEIAV---------PASLFLLGLNVASAAVGASI-----AKSKARSVPLWVFKGALAGLPSVLELKGLPELV 1218
            D   L+ +L  YLA+R+  G  E +    G V     G A+L F+S+ P +  +   P        ++ L Y ELT+YGYG+L+ P+MN+GG +   + +GID     R     E  + V   +G   N KA   G L +G   ++ +     +   +RKK          ++ +  +SA  + G + P    +  +P S    T + +DEE  R       Q   ++W    R       P + L LNF QR  ++     ++ AFG+ T   L    L    A+++V         PA  F+L      A++G+SI     +KSK RS  +W  KG L G  +V +L+ L  L+
Sbjct:   65 DLEELKLQLIEYLAKRKDVGADEKAKEDVGKVIGGSKGNAVLEFVSLAPNKGQVIETP--------SNALDYDELTKYGYGHLVTPIMNAGGRLEMYKLLGIDAPAVKRPPPPPEAPKLVVDRIGE--NDKARYSG-LRMGLLNDDAMAEA--LQEAQRKK----------RSGEPLRSALVEEGFVRPFADKRNVSPKSTPEWTPERIDEETKR-------QGRSNDWARRAREGQFVRDPMESLDLNFQQRVFSIFSALLVSTAFGRSTPIFLSQ-YLGDSTAKLSVLSFLSALQAPAGAFVL------ASIGSSIFCVVSSKSKNRSAIVWFIKGLLGGPLTVGQLRELDSLL 383          
BLAST of mRNA_L-elsbetiae_contig7679.16608.1 vs. uniprot
Match: B5YNF0_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YNF0_THAPS)

HSP 1 Score: 73.6 bits (179), Expect = 2.740e-10
Identity = 96/356 (26.97%), Postives = 146/356 (41.01%), Query Frame = 1
Query:  244 LEAELKAYLAERQAGNPENS-----GDVKPRGAGGALLNFLSVNPTEMALENEPDKDEWDGEADVLSYSELTRYGYGYLIEPMMNSGGYVAASERMGID-------LNTRTLKDNEYYERVNPT-----VGLDMNKKADKDGFLTLGSAREERLNSVANVDREERKKSLFEKQAMMDKNAKAEKSAARQAGLLNPKRKTPVSLGGRTQKELDEELYRKPGLPEEQRDISEWVPAVRAEDA--GPPQPLLLNFAQRANAVAVCGCLALAFGKGTVDALET-GLLPREVAEIAVPASLFLLGLNVASAAVGASI-AKSKARSVPLWVFKGALAGLPSVLELKGLPELVPTLVGSQESS 1248
            L+ EL  YL +R+  N + +     G V     G  +L+F+S +P +  ++ E          DV  Y ELT+YGY YL+ P+M +GG  A  + M +        L  +        +R   T      GL M+   D D    +G A EE    V     E  +K L E+  ++       K   RQ  L  P++             LDE   RK G      +   W    R  +    P + L +    R  ++ V   +ALAFG  T  AL   G+   ++ ++    +L LL     S  + A + A  K RS  +W  KG   G  S+ +L+ L +L+   +G  ESS
Sbjct:   82 LKVELAEYLRKREEANADEAAKSEVGKVIGGTRGNIVLDFVSGSPNKQRVQEEA--------PDVFDYDELTKYGYSYLVTPIMKNGGRRAMYQLMNLPEPATPERLTKKKSAPKLVIDRTGETDKARYTGLKMSAAMDDDA---MGKALEEAARKVKQG--ESLRKKLVEEDYVLPYADNTNKGP-RQTPLWTPEK-------------LDE-AGRKAG------EAQAWARKARMGELKKDPFEILAVEGELRVYSIVVAFTVALAFGNATPTALRMLGVGSDDMLDVFRVPALALLAAGFGSCLMNALVLAPPKRRSSFVWGLKGLFGGPLSIRQLRELDDLMT--IGESESS 401          
BLAST of mRNA_L-elsbetiae_contig7679.16608.1 vs. uniprot
Match: A0A8J2S627_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S627_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 3.070e-8
Identity = 86/330 (26.06%), Postives = 141/330 (42.73%), Query Frame = 1
Query:  238 PVLEAELKAYLAERQAGNPENS----GDVKPRGAGGALL----NFLSVNPTEMALENEPDKDEWDGEADVLSYSELTRYGYGYLIEPMMNSGGYVAASERMGIDLNTRTLKDNEYYERVNPTVGLDMNKKADKDGFLTLGSAREERLNSVANVDREERKKSLFEKQAMMDKNAKAEKSAARQAGLLNPKRKTPVSLGGRTQKELDEELYRKPGLPEEQRDISEWVPAVRAEDAGPPQPLLLNFAQRANAVAVCGCLALAFGKGTVDALETGLLPREVAEIAVPASLFLLGLNVASAAVGASIAKSKARSVPLWVFKGALAGLPSVLELKG 1203
            P LEA++K+YLA R      N+    G     G     +    N+L    T +  +   D+     E D LSY+EL +YG+G L++P+M++GGY A S+ +G+ ++           R  P    D+ ++  + G ++LG + EE++  +  ++           Q  +DK AKA  +            K P       ++EL     R+P      + ++E     + E      PL L FA RA AV     +       T   L+   L  ++ ++A P    +L  NVA+A  G  + +   R  P +    AL G P VL  +G
Sbjct:   37 PALEADIKSYLAVRDQALRTNTTVDRGQEIREGTENNPVWQGANYLLSLDTFLPKDGNLDEYGRVKEVDALSYTELEKYGFGKLVQPIMDAGGYAAVSKALGVAVSA---------PRAPPVPSDDVVREGPQRG-VSLGGSIEEKMAEIGKLNAT---------QIKLDKEAKA--AXXXXXXXXXXXXKPP-------REELVVRTTRRP------KKVTEAPKVEKREWPAAAAPLSLGFAPRAYAVLALLLVGAPGAPATAQLLQQVGLSGDLGDLA-PVGAAVLAANVAAA--GVVVFRGSER--PAFAALRALVGGPLVLLEEG 327          
BLAST of mRNA_L-elsbetiae_contig7679.16608.1 vs. uniprot
Match: A0A8J6C0T9_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C0T9_DIALT)

HSP 1 Score: 65.5 bits (158), Expect = 7.490e-8
Identity = 98/342 (28.65%), Postives = 132/342 (38.60%), Query Frame = 1
Query:  190 MAGPNQGQKPGFFADWPVLEAELKAYLAERQAGNPENSGDVKPRGAGGALLNFLSVNPTEMALENEPDKDEWDGEADVLSYSELTRYGYGYLIEPMMNSGGYVAASERMGIDLNTRTLKDNEYYERVNPTVGLDMNKKADKDGFLTLGSAREERLNSVANVDREERKKSLFEKQAMMDKNAKAEKSAARQAGLLNPKRKTPVSLGGRTQKELDEELYRKPGLPEEQRDISEWVPAVRAEDAGPPQPLL----LNFAQRANAVAVCGCLALAFGKGTVDALE-TGLLPREVAEIAVPASLFLLGLNVASAAVGASIAKSKARSVPLWVFKGALAGLPSVLELK 1200
            MAGP Q   P  FA    LEAEL+A++A   A                A L+  S+ P                    L+YSEL+R G   L   +M++GGY+  S R+G+      L        V      D  ++A K GFL LG AR     S      E ++ S F               A R+   L P++     L          EL R               P V  +D  P + LL    ++  QRA+AV +   LALAFG      L+   LL    A + + A+   LG      A  A +A  K RS   W  K ALAG P++ EL+
Sbjct:   47 MAGPRQ---PARFATVEALEAELRAHVAALPA----------------AELDDESLPPP-------------------LAYSELSRNGRDDLARAVMDAGGYIQMSRRLGLRW---ALPKKAAPPPVVEVRNFDP-REALKSGFLKLGEAR-----SATEDVLETKRLSEF---------------ARREPAQLTPQQVGRSKLA---------ELLR-----------PARAPYVSTDDPLPGRQLLVDMQMSLPQRASAVLLAWALALAFGAHPTVPLDGDALLAARGAAVGLAAAHAALG------AYAAVLAAGKGRSAVTWALKAALAGAPALAELR 300          
BLAST of mRNA_L-elsbetiae_contig7679.16608.1 vs. uniprot
Match: A0A8J9SH58_PHATR (Hypothetical protein n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9SH58_PHATR)

HSP 1 Score: 64.3 bits (155), Expect = 1.240e-7
Identity = 82/290 (28.28%), Postives = 130/290 (44.83%), Query Frame = 1
Query:  415 ADVLSYSELTRYGYGYLIEPMMNSGGYVAASERMGIDLNT--RTLKDNEYYERVNPTVGLDMNKKADKDGFLTLGSAREERLNSVANVDREERKKSLFEKQAMMDKNAKAEKSAARQAGLLNP----KRKTPVSLGGRTQKELDEELYRKPGLPEEQRDISEWVPAVRAED--AGPPQPLLLNFAQRANAVAVCGCLALAFGKGTVDALETGLLPREVAEIAV---------PASLFLLGLNVASAAVGASI-----AKSKARSVPLWVFKGALAGLPSVLELKGLPELV 1218
            ++ L Y ELT+YGYG+L+ P+MN+GG +   + +GID     R     E  + V    G   N KA   G L +G   ++ +     +   +RKK          ++ +  +SA  + G + P    +  +P S    T + +DEE  R       Q   ++W    R       P + L LNF QR  ++     ++ AFG+ T   L    L    A+++V         PA  F+L      A++G+SI     +KSK RS  +W  KG L G  +V +L+ L  L+
Sbjct:    8 SNALDYDELTKYGYGHLVTPIMNAGGRLEMYKLLGIDAPAVKRPPPPPEAPKLVVDRTGE--NDKARYSG-LRMGLLNDDAMAEA--LQEAQRKK----------RSGEPLRSALVEEGFVRPFADKRNVSPKSTPEWTPERIDEETKR-------QGRSNDWARRAREGQFVRDPMESLDLNFQQRVFSIFSALLVSTAFGRSTPIFLSQ-YLGDSTAKLSVLSFLSALQAPAGAFVL------ASIGSSIFCVVSSKSKNRSAIVWFIKGLLGGPLTVGQLRELDSLL 268          
BLAST of mRNA_L-elsbetiae_contig7679.16608.1 vs. uniprot
Match: A0A0G4H5C6_VITBC (Guanylate kinase-like domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4H5C6_VITBC)

HSP 1 Score: 59.7 bits (143), Expect = 1.280e-5
Identity = 43/128 (33.59%), Postives = 62/128 (48.44%), Query Frame = 1
Query:  196 GPNQGQKPGFFADWPVLEAELKAYLAERQ----AGNPENSGDVKPRGAGGALLNFLSVNPTEMALENEPDKDEWDGEADVLS--------------YSELTRYGYGYLIEPMMN-SGGYVAASERMGI 522
            GPN+ Q+  FF  +  LE+E++ YL +R+     G P   GD    G GG L  F+           + D    DG+   LS              Y EL+RYGYGYL++P+M   GGY+  S+R+ +
Sbjct:   14 GPNRHQQSAFFGSFDALESEVQHYLGDRERQIITGAPAAEGD---HGNGG-LQAFIRWPFGRSERHRQGDS---DGQQSPLSAQDVRERLARAPLEYGELSRYGYGYLVDPIMRYHGGYIRVSQRLNL 134          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7679.16608.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A6H5LAW1_9PHAE2.950e-21074.13Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z3J1_9STRA1.190e-2932.90Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6V2IIN7_9STRA2.160e-1127.99Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
B7FW49_PHATC2.790e-1128.09Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
B5YNF0_THAPS2.740e-1026.97Predicted protein n=1 Tax=Thalassiosira pseudonana... [more]
A0A8J2S627_9STRA3.070e-826.06Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A8J6C0T9_DIALT7.490e-828.65Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
A0A8J9SH58_PHATR1.240e-728.28Hypothetical protein n=1 Tax=Phaeodactylum tricorn... [more]
A0A0G4H5C6_VITBC1.280e-533.59Guanylate kinase-like domain-containing protein n=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7679contigL-elsbetiae_contig7679:3079..7689 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score77.8
Seed ortholog evalue1.4e-11
Seed eggNOG ortholog2850.Phatr44926
Hectar predicted targeting categorysignal peptide
EggNOG OGs2E95U@1,2SFJE@2759,2XBB6@2836
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-01_006390.1
Exons6
Model size1709
Cds size1266
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816852.873479-CDS-L-elsbetiae_contig7679:3078..32151622816852.873479-CDS-L-elsbetiae_contig7679:3078..3215Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7679 3079..3215 +
1691683862.4673502-CDS-L-elsbetiae_contig7679:3078..32151691683862.4673502-CDS-L-elsbetiae_contig7679:3078..3215Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7679 3079..3215 +
1622816852.8854167-CDS-L-elsbetiae_contig7679:3700..40091622816852.8854167-CDS-L-elsbetiae_contig7679:3700..4009Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7679 3701..4009 +
1691683862.4778488-CDS-L-elsbetiae_contig7679:3700..40091691683862.4778488-CDS-L-elsbetiae_contig7679:3700..4009Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7679 3701..4009 +
1622816852.897404-CDS-L-elsbetiae_contig7679:4398..45871622816852.897404-CDS-L-elsbetiae_contig7679:4398..4587Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7679 4399..4587 +
1691683862.4886386-CDS-L-elsbetiae_contig7679:4398..45871691683862.4886386-CDS-L-elsbetiae_contig7679:4398..4587Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7679 4399..4587 +
1622816852.9097679-CDS-L-elsbetiae_contig7679:5035..51861622816852.9097679-CDS-L-elsbetiae_contig7679:5035..5186Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7679 5036..5186 +
1691683862.4999735-CDS-L-elsbetiae_contig7679:5035..51861691683862.4999735-CDS-L-elsbetiae_contig7679:5035..5186Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7679 5036..5186 +
1622816852.9209242-CDS-L-elsbetiae_contig7679:6271..65351622816852.9209242-CDS-L-elsbetiae_contig7679:6271..6535Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7679 6272..6535 +
1691683862.509846-CDS-L-elsbetiae_contig7679:6271..65351691683862.509846-CDS-L-elsbetiae_contig7679:6271..6535Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7679 6272..6535 +
1622816852.9334347-CDS-L-elsbetiae_contig7679:7030..72461622816852.9334347-CDS-L-elsbetiae_contig7679:7030..7246Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7679 7031..7246 +
1691683862.5194533-CDS-L-elsbetiae_contig7679:7030..72461691683862.5194533-CDS-L-elsbetiae_contig7679:7030..7246Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7679 7031..7246 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816852.944647-UTR-L-elsbetiae_contig7679:7246..76891622816852.944647-UTR-L-elsbetiae_contig7679:7246..7689Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7679 7247..7689 +
1691683862.5322673-UTR-L-elsbetiae_contig7679:7246..76891691683862.5322673-UTR-L-elsbetiae_contig7679:7246..7689Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7679 7247..7689 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7679.16608.1prot_L-elsbetiae_contig7679.16608.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig7679 3079..7246 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig7679.16608.1

>prot_L-elsbetiae_contig7679.16608.1 ID=prot_L-elsbetiae_contig7679.16608.1|Name=mRNA_L-elsbetiae_contig7679.16608.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=422bp
MWLRVLSVILCTTGAGGFYLSFSRPTHLATLGLKPCTTTSGACHASRCPR
SRFPATTTSRMMMMAGPNQGQKPGFFADWPVLEAELKAYLAERQAGNPEN
SGDVKPRGAGGALLNFLSVNPTEMALENEPDKDEWDGEADVLSYSELTRY
GYGYLIEPMMNSGGYVAASERMGIDLNTRTLKDNEYYERVNPTVGLDMNK
KADKDGFLTLGSAREERLNSVANVDREERKKSLFEKQAMMDKNAKAEKSA
ARQAGLLNPKRKTPVSLGGRTQKELDEELYRKPGLPEEQRDISEWVPAVR
AEDAGPPQPLLLNFAQRANAVAVCGCLALAFGKGTVDALETGLLPREVAE
IAVPASLFLLGLNVASAAVGASIAKSKARSVPLWVFKGALAGLPSVLELK
GLPELVPTLVGSQESSGSSAG*
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mRNA from alignment at L-elsbetiae_contig7679:3079..7689+

Legend: CDSpolypeptideUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig7679.16608.1 ID=mRNA_L-elsbetiae_contig7679.16608.1|Name=mRNA_L-elsbetiae_contig7679.16608.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4611bp|location=Sequence derived from alignment at L-elsbetiae_contig7679:3079..7689+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTGGCTCCGCGTACTGTCCGTGATACTATGCACCACAGGCGCAGGGGG GTTCTATCTATCGTTTTCACGTCCAACACACCTTGCAACGCTGGGTCTGA AGCCTTGTACGACCACGTCTGGCGCGTGTCATGCAAGGTACGCGGCTACA CCGATACATACGACGTCATGGACATGTATCACACATGTTGGTGTCCGCTC CGTTGTTCTAGATCAGCTGTTTTACTGCGTACGTACACCGATACTAGTTT GTTTGGGGGCCAGTTGCAGGCTTGCGATCCCCCAACAGCAGTTACCAAGG ATTTTACATGCGGGTTGCAGTGCCAGAGCTCGTCATGTTATGTGTCAAAT AGTCACCGAGCCCGGCCGTCAAGCAGGTGACATATTATTTGTACTCGATG TCGATTCCAACATACGCAACTCGATGCAGCAGTGGTGCGGTGTGGTACCG AACGATGGGATTGCCAACCCTTTGGATGACGATAGAAAAATGGAGAAGTA TGACATAGACTACTCTCTCTTCGCGTAGAGAGGCTTGGTTCGACGGGGGG AACCAAGAGATGAAGCGACCAGCGGCACACGTCCGATGCCCACGCCGCTT GCCGTACTCGAACACACCGAAGCAGGTGCCCGAGATCACGATTTCCTGCG ACCACAACAAGTCGGATGATGATGATGGCGGGTCCCAACCAAGGCCAAAA GCCTGGCTTTTTCGCCGACTGGCCCGTGCTGGAGGCCGAGCTGAAGGCCT ACCTGGCCGAGCGACAGGCGGGAAATCCAGAGAACAGCGGCGACGTCAAG CCCAGGGGGGCAGGGGGCGCGCTGCTGAACTTCTTGTCCGTAAATCCCAC CGAGATGGCCCTGGAGAACGAGCCGGACAAAGACGAGTGGGACGGGGAGG CGGACGTGCTTTCGTACAGCGAGCTGACACGGTGAGTGGGTGGGAGTGGC GGCTCCCCTTCCCCCTTTTCTCCTCCTCCCCCTCTCGTCGTTGTTGCTGC TTGTCTCTCTAGGCTCCTCGGGTAGGCATGGCGGAGCCTAAGCACGCCAC AGGAGACCGAGAGGCGTTATGCTCGTCGTCGTGGTTTTGGGTCGTCGTGC TTAGCTTTTTCCGAGACGGAGGACCACGAACAACCTCGTTTCGGCTCTCG GGGGGTACAGTAGTACACCTAAAGCCCTTGCCGCTCTCACAATCATGTCT ACATTGACATCCTGTGGCCTCTTTCACCGCAGATTGAATATCTGCCTGTT GGACACGTCCCTTTGATCCAATCCTATGCCACATTCCGTTCCAAACAAAC GACGTTTCGGCACGACACAGGTACGGGTATGGGTACCTCATCGAGCCAAT GATGAATTCAGGAGGATACGTCGCGGCCTCCGAGCGCATGGGCATTGACT TGAACACTCGCACGCTGAAGGACAATGAGTACTACGAGCGAGTAAACCCG ACCGTGGGGTTGGACATGAACAAGAAGGCGGACAAGGATGGCTTCCTCAC GCTCGGAAGGTATCTAGCGTTTAAGTATACTTCGTACTTCGAGTAGGTAT GTACTTCTATGTGTTCAAGTACGGGGTTGCGGTCGCGTTTCTGTCGTCAT GAGGTCGTGACAACTACACGTGGAGTTCTTTAACTTGAAGTTGGGGTTAT CTTACGAGGTCGGCGTTGGAGTTCAGCCACTCCCCCCATGTGTGGTGGCT TCACAGCAGTTTTGCCGTCCACCGACACAACCGCTATGGCCGCAGTTTCG GCGTATGTACATGCAGCAAGTGTGACGTGTGTGTCGTGGATGGACACGTG TATTTTCGAGGCGGCGCATCTGTGCATGTAACACACAGTCGTGTCGACCC TGTGGCGCTCGATTGAAGTCCACACGCGAAACCGCCAACCTAACCCACTC TGCCTGCTCGCCCTCGCCCCCCTCCGTCCCTGCCCCCCGAATTCATTATC TCATAAGTGCACGAGAGGAACGGTTGAACAGCGTGGCGAACGTCGACCGC GAGGAGAGAAAAAAGTCCCTCTTCGAGAAGCAGGCCATGATGGACAAAAA TGCGAAAGCAGAAAAGAGCGCCGCACGCCAGGCCGGCTTGCTCAACCCGA AGAGAAAGGTGTGCGTGCGTGTTCGGCCAACCCCCGAGATCTAAAGTTAT CCTCGCCTTTTCTGCTCACCAGGCGTGCTCGGGGTACTCCGAAGCGGTGT GCTTCCGCGATGAAGGGCACGCCGGGTACGATGTATCTCGATACTATTTT CGGTGTGTAGCGCCCCGGTTTGCTTTTTATGGCACTGCTGTGCCGAGTTT AGTGTAGCGCCTGTCTGACGACTTACGCGCTACGCTTGATGGTAGAGTCT ACAGACAGAGTGTGCAGGGTAGATCAGCCCTCGGTGTCAGACTGTCTAGC TAGGTCTATTCCGCGCATCAGGTGGAAGTACCAAGATCTGCTTGCTCTTG ACCTTGACCGCCGGGAGCATTTTTTGAAAGAAAAACAGTTAAAATCAAAA ATGGAACCTGACCCACATTGAGACGGGACTCCGTGAGATTCAAGCGGTAT TCCGATGGGTGACGTAATATTGGGCCGGCCGAGTAGAAAAACACGTAAAA TACAAGAAGAATTCACCATCTCCCCTGCATCTTTTGCTGAATGTACGAGC TCGTGTAAGGGCGTGTAACCTCCTAGACACCGTCGGAAGGTCCGATTGCG AGGGCGAAGCCCGCCATTAACGCAGACACAGAACTGAATCACTCCGCCTC TGAGCTGGCGCGCTGACGACGTGGCAGATGTAACAGAAACGCCCCGCTAG GCGGGGTAAAACATGCATACGTCGGTGGAGACGTACGTGACGGGACACGC ATACGCGCGCGCGTATACAAGAGCCGGAGCGTATGGAAAGTTGTCCCGTT GGTTGTGTAGGTTACAGCGACAGAGGTGACTGATACGTGCTTCCTTCAAT ATCCAGGTCGTTTCGACCCTTTCATCTCTGCCGTCAACGGGCAGTGCATA ACCACCGCGTCGGGTATTTAGGGAGTCCTCGTAGTCTCAGCTCCGCTTTC CCACAACGTGGTGTCCTTCTGGATTTGGGTACTGCTGTGCTATGCAAGCC AAACACAGGGTGTATTTCTAATGCAAGCATGGCCGTCGTTGTTTTTACAG CTCTACTTCCGTGCGTCCTGTGTACTTTCGTGTGTTTGAGCAGACACCGG TGTCGTTGGGCGGCCGAACCCAAAAGGAGTTGGATGAAGAACTGTACCGC AAGCCTGGCCTTCCCGAGGAACAGAGAGACATCTCGGAGTGGGTGCCTGC GGTGCGCGCCGAAGACGCAGGGCCGCCGCAGCCGCTGCTGTTGAACTTTG CCCAGCGAGCGAACGCCGTGGCGGTGTGCGGGTGTCTCGCTCTTGCGTTC GGGAAGGGTACGGTGGACGCCTTGGAGACCGGGCTCCTCCCACGAGAGGT GGCGGAGGTGTGTGTGTGTGACGGGGTAGCGTATGTTTGTTTGTGAGTAC AATAGGTACTTTCGAACTGCGCTACCCGCTGACCAATGAACGACGCCAGT CTTTGGACGTCAGTCTTCAAGAAACGTTTTTCGGTAAACGGAACTATGGA GGAGGATGGCCGGAAAGATCCTTCCAATGTTTGCGTACTTTTTATGGTGA GAGGTATCTGCCGATGAACGCAGGATATTTGAAGCTTTGTGCCGTTGTTT TCTATCCGCCATGCCTGGCAAATAGAGAGGGCTGTTCGTGTATGCCTCCA CACCGCGGAAGCAGAGGGTATCGCGAAATGTTCAAGTGTGTTTACGCATT TCGTACTGCTGTTGTCATGTACTACTACTTCCTCCAGTGTCGAGTGTCGA CGCACACCCTCATCCGAATGGCAGAAGAAGATGGATATGCCACCTTTTTT CTGACAACGCTATACTATTAAATTAATAAATGTCAACGTTTTTTTTCAAC AGATCGCAGTGCCGGCTAGCCTTTTTCTGCTGGGCCTCAATGTGGCCAGC GCAGCGGTGGGCGCGTCGATCGCGAAGAGCAAGGCCCGTTCGGTGCCATT GTGGGTGTTCAAGGGAGCGCTGGCTGGACTACCAAGCGTGTTGGAGCTCA AGGGACTCCCCGAACTCGTTCCTACATTGGTTGGCTCGCAGGAGTCCAGC GGTTCGAGTGCTGGTTGATTATTTTTGTACTCGATAGTTTTGTGTGGTAC ATGGCGCAGTCTGGTACATGCTGCCGTGGTCGTTCCGACTCCTTGTGAGC AGGTGCTGCCCGCAGCCAGCAGCGGCATGTGAGGCGCAACGTTCGTGTGC GAGTTGTATTCAACATCACCGCATTGGTTTAGCAGCGGAGTATTTTTCAT GTCGAGGTCGTGGGAAAATATTCGTTCACATAACAGCTGAGAGTTTTGCC CCAAATGTTAGTAGATAGTATGGCTTGAGGAAGGACAGTAGGGCACCGAT CGTTAACGCTCTGTTGAAATAGCCCCACAAGCCCGTTAGACTGCTGTAAT TGCGCGTGATTGAACCGGGGCGGTCGTTTTTCTTTATCATTTCTCTCGAG TACTTCCGAGGAGTGCGATAAACACATGTGCAAAAATTGAATTTGAATAA TCTTCAGCCTG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig7679:3079..7689+

>mRNA_L-elsbetiae_contig7679.16608.1 ID=mRNA_L-elsbetiae_contig7679.16608.1|Name=mRNA_L-elsbetiae_contig7679.16608.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2532bp|location=Sequence derived from alignment at L-elsbetiae_contig7679:3079..7689+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTGGCTCCGCGTACTGTCCGTGATACTATGCACCACAGGCGCAGGGGG
GTTCTATCTATCGTTTTCACGTCCAACACACCTTGCAACGCTGGGTCTGA
AGCCTTGTACGACCACGTCTGGCGCGTGTCATGCAAGATGTGGCTCCGCG
TACTGTCCGTGATACTATGCACCACAGGCGCAGGGGGGTTCTATCTATCG
TTTTCACGTCCAACACACCTTGCAACGCTGGGTCTGAAGCCTTGTACGAC
CACGTCTGGCGCGTGTCATGCAAGCAGGTGCCCGAGATCACGATTTCCTG
CGACCACAACAAGTCGGATGATGATGATGGCGGGTCCCAACCAAGGCCAA
AAGCCTGGCTTTTTCGCCGACTGGCCCGTGCTGGAGGCCGAGCTGAAGGC
CTACCTGGCCGAGCGACAGGCGGGAAATCCAGAGAACAGCGGCGACGTCA
AGCCCAGGGGGGCAGGGGGCGCGCTGCTGAACTTCTTGTCCGTAAATCCC
ACCGAGATGGCCCTGGAGAACGAGCCGGACAAAGACGAGTGGGACGGGGA
GGCGGACGTGCTTTCGTACAGCGAGCTGACACGCAGGTGCCCGAGATCAC
GATTTCCTGCGACCACAACAAGTCGGATGATGATGATGGCGGGTCCCAAC
CAAGGCCAAAAGCCTGGCTTTTTCGCCGACTGGCCCGTGCTGGAGGCCGA
GCTGAAGGCCTACCTGGCCGAGCGACAGGCGGGAAATCCAGAGAACAGCG
GCGACGTCAAGCCCAGGGGGGCAGGGGGCGCGCTGCTGAACTTCTTGTCC
GTAAATCCCACCGAGATGGCCCTGGAGAACGAGCCGGACAAAGACGAGTG
GGACGGGGAGGCGGACGTGCTTTCGTACAGCGAGCTGACACGGTACGGGT
ATGGGTACCTCATCGAGCCAATGATGAATTCAGGAGGATACGTCGCGGCC
TCCGAGCGCATGGGCATTGACTTGAACACTCGCACGCTGAAGGACAATGA
GTACTACGAGCGAGTAAACCCGACCGTGGGGTTGGACATGAACAAGAAGG
CGGACAAGGATGGCTTCCTCACGCTCGGAAGGTACGGGTATGGGTACCTC
ATCGAGCCAATGATGAATTCAGGAGGATACGTCGCGGCCTCCGAGCGCAT
GGGCATTGACTTGAACACTCGCACGCTGAAGGACAATGAGTACTACGAGC
GAGTAAACCCGACCGTGGGGTTGGACATGAACAAGAAGGCGGACAAGGAT
GGCTTCCTCACGCTCGGAAGTGCACGAGAGGAACGGTTGAACAGCGTGGC
GAACGTCGACCGCGAGGAGAGAAAAAAGTCCCTCTTCGAGAAGCAGGCCA
TGATGGACAAAAATGCGAAAGCAGAAAAGAGCGCCGCACGCCAGGCCGGC
TTGCTCAACCCGAAGAGAAAGTGCACGAGAGGAACGGTTGAACAGCGTGG
CGAACGTCGACCGCGAGGAGAGAAAAAAGTCCCTCTTCGAGAAGCAGGCC
ATGATGGACAAAAATGCGAAAGCAGAAAAGAGCGCCGCACGCCAGGCCGG
CTTGCTCAACCCGAAGAGAAAGACACCGGTGTCGTTGGGCGGCCGAACCC
AAAAGGAGTTGGATGAAGAACTGTACCGCAAGCCTGGCCTTCCCGAGGAA
CAGAGAGACATCTCGGAGTGGGTGCCTGCGGTGCGCGCCGAAGACGCAGG
GCCGCCGCAGCCGCTGCTGTTGAACTTTGCCCAGCGAGCGAACGCCGTGG
CGGTGTGCGGGTGTCTCGCTCTTGCGTTCGGGAAGGGTACGGTGGACGCC
TTGGAGACCGGGCTCCTCCCACGAGAGGTGGCGGAGACACCGGTGTCGTT
GGGCGGCCGAACCCAAAAGGAGTTGGATGAAGAACTGTACCGCAAGCCTG
GCCTTCCCGAGGAACAGAGAGACATCTCGGAGTGGGTGCCTGCGGTGCGC
GCCGAAGACGCAGGGCCGCCGCAGCCGCTGCTGTTGAACTTTGCCCAGCG
AGCGAACGCCGTGGCGGTGTGCGGGTGTCTCGCTCTTGCGTTCGGGAAGG
GTACGGTGGACGCCTTGGAGACCGGGCTCCTCCCACGAGAGGTGGCGGAG
ATCGCAGTGCCGGCTAGCCTTTTTCTGCTGGGCCTCAATGTGGCCAGCGC
AGCGGTGGGCGCGTCGATCGCGAAGAGCAAGGCCCGTTCGGTGCCATTGT
GGGTGTTCAAGGGAGCGCTGGCTGGACTACCAAGCGTGTTGGAGCTCAAG
GGACTCCCCGAACTCGTTCCTACATTGGTTGGCTCGCAGGAGTCCAGCGG
TTCGAGTGCTGGTTGAATCGCAGTGCCGGCTAGCCTTTTTCTGCTGGGCC
TCAATGTGGCCAGCGCAGCGGTGGGCGCGTCGATCGCGAAGAGCAAGGCC
CGTTCGGTGCCATTGTGGGTGTTCAAGGGAGCGCTGGCTGGACTACCAAG
CGTGTTGGAGCTCAAGGGACTCCCCGAACTCGTTCCTACATTGGTTGGCT
CGCAGGAGTCCAGCGGTTCGAGTGCTGGTTGA
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