mRNA_L-elsbetiae_contig7679.16608.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7679.16608.1 vs. uniprot
Match: A0A6H5LAW1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LAW1_9PHAE) HSP 1 Score: 600 bits (1548), Expect = 2.950e-210 Identity = 318/429 (74.13%), Postives = 356/429 (82.98%), Query Frame = 1 Query: 1 MWLRVLSVILCTTGAGGFYLSFSRPTHLATLGLKPCTTTSGA-CHASRCPRSRFPATTTSR---------MMMMAGPNQGQKPGFFADWPVLEAELKAYLAERQAGNPENSGD-VKPRGAGGALLNFLSVNPTEMALENEPDKDEWDGEADVLSYSELTRYGYGYLIEPMMNSGGYVAASERMGIDLNTRTLKDNEYYERVNPTVGLDMNKKADKDGFLTLGSAREERLNSVANVDREERKKSLFEKQAMMDKNAKAEKSAARQAGLLNPKRKTPVSLGGRTQKELDEELYRKPGLPEEQRDISEWVPAVRAEDAGPPQPLLLNFAQRANAVAVCGCLALAFGKGTVDALETGLLPREVAEIAVPASLFLLGLNVASAAVGASIAKSKARSVPLWVFKGALAGLPSVLELKGLPELVPTLVGSQESSGS 1254 MWL V++ ILC GAGGFY+ PT LKP T+S + CHA RC R R P ++MMAGPNQGQKPGFFA+WPVLEAE++AYL ERQAG+PE G V+ +GAGG LLNFLSVNPT+MALENEPD+DEWDGE +VLSYSELTRYGYGYLIEPMM GGYVAASERMGIDLN RTLKDNEYYER NPTVGLD+ KKADKDGFLTLGSA+EERLNSVANV RE+R+KSLFEKQAMMDK KA+K+A +++ +LN RK PV+LGGR+QKE+DEE++RKPGL EQRDISEWVP VRAEDA P QPLLLNFAQRANAVAVCGCL+LAFGKGT+DALETGLLPR+VAE AVPASLFLLGLNVASA GASIAK+K RSVPLWVFKGALAGL SVLELKGLPELVP +GS S+ + Sbjct: 6 MWLPVITAILCVAGAGGFYVRTIAPT----ASLKPSPTSSSSRCHA-RCSRRRLPTXXXXXXXXXXXXRTIVMMAGPNQGQKPGFFAEWPVLEAEIRAYLDERQAGDPEKGGGGVESKGAGGTLLNFLSVNPTQMALENEPDRDEWDGEVNVLSYSELTRYGYGYLIEPMMKIGGYVAASERMGIDLNARTLKDNEYYERTNPTVGLDIQKKADKDGFLTLGSAKEERLNSVANVSREDRRKSLFEKQAMMDKKTKAKKAATKKSRVLNTSRKVPVNLGGRSQKEVDEEIFRKPGLTAEQRDISEWVPEVRAEDALPAQPLLLNFAQRANAVAVCGCLSLAFGKGTLDALETGLLPRDVAEAAVPASLFLLGLNVASAVAGASIAKNKGRSVPLWVFKGALAGLTSVLELKGLPELVP--LGSSSSASA 427
BLAST of mRNA_L-elsbetiae_contig7679.16608.1 vs. uniprot
Match: A0A835Z3J1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3J1_9STRA) HSP 1 Score: 128 bits (322), Expect = 1.190e-29 Identity = 102/310 (32.90%), Postives = 148/310 (47.74%), Query Frame = 1 Query: 355 VNPTEMALENEPDKD-----EWDGEADVLSYSELTRYGYGYLIEPMMNSGGYVAASERMGIDLNTRTLKDNEYYERVNPTVGLDMNKKAD-KDGFLTLGSAREERLNSVANVDRE---ERKKSLFEKQAMMDKNAKAEKSAARQAGLLNPKRKTPVSLGGRTQKELDEELYRKPGLPEEQRDISEWVPAVRAEDAGPPQPLLLNFAQRANAVAVCGCLALAFGKGTVDALETGLLPREVAEIAVPASLFLLGLNVASAAVGASIAKSKARSVPLWVFKGALAGLPSVLELKGLPELVPTLVGSQESSGSS 1257 +NP+ + + D D EWDG D L YSEL YGY YL+EP+MN+GGY+A S R+G+ + ++ + + P + + +D K+GFL LGSA +ER+ + A + ER LFEKQA+MD + +A + A +A + +R P + R + LP E+ + L+ QRA +A A+ FG+GT A++ GL P + A LL N SA + A +A R V W KGALAG SV EL+GL + + S SS Sbjct: 10 INPSAIGRPDRFDDDFEEPVEWDGAPDPLEYSELRAYGYQYLVEPIMNAGGYIAVSNRLGVHVTPKSRRRRAAFA---PGEEPKLLRPSDAKEGFLALGSALDERMEAAAAAAPQRAAERSARLFEKQALMDADERAARRDAAEAAPVY-RRAAPEVVAARAAXXXXXDXADAAALPRER--------------------IGLSALQRAYVLATAVSAAVGFGRGTPAAVDVGL-PEAAVQAAAAVGFALLLANAGSAVLSARMASRGGRGVVHWALKGALAGPVSVAELRGLVGVEGVVQAGSGGSDSS 294
BLAST of mRNA_L-elsbetiae_contig7679.16608.1 vs. uniprot
Match: A0A6V2IIN7_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2IIN7_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 2.160e-11 Identity = 110/393 (27.99%), Postives = 176/393 (44.78%), Query Frame = 1 Query: 160 PATTTSRMMMMAGPNQGQKPGFFADWPVLEAELKAYLAERQAGNPENS-----GDVKPRGAGGALLNFLSVNPT-EMALENEPDKDEWDGEADVLSYSELTRYGYGYLIEPMMNSGGYVAASERMGI---DLNTRTLKDNEYYERVNPTVGLDMNKKADKDGFLTLGSAREERLNSVANVDREERKKSLFEKQAMMDKNAKAEKSAARQAGLLNPKRKTPVS----LGGR-----TQKELDEELYRKPGLPEEQRDISEWVPAVRAEDA----GPPQPLLLNFAQRANAVAVCGCLALAFGKGTVDAL---------ETGLLPREVAEIAVPASLFLLGLNVASAAV-GASIAKSKARSVPLWVFKGALAGLPSVLELKGLPELVPTLVGSQE 1242 P++ +S +++++ G D L+ EL AYL +R+ N + + G + G A+L F+S +P E +E P+ Y E+T+YGYGYL++P+MN+GG A + M + ++TR K + V +D K DK + L ++ + + D R A+M+ N KA++ + + LL + + P + +G R T +++DE RK G + EW A RA D + + + R A C ++ AFG+ T AL E GLL + + VPA L L+ + S+ V G +A K RS W KG L G +VL+L+ L E + T SQE Sbjct: 61 PSSFSSSLVVLSAGADGTD----VDLEGLKEELTAYLKKREEMNADEAAKEQIGKIVGGTKGNAVLEFVSGSPNKEYKIEEVPN---------AFDYDEITKYGYGYLVKPIMNAGGRRAMYKLMNMPEPSISTRLTKPKSARKLV-----IDREGKEDKARYSGL------KMTQMLDDDAMAR--------ALMEANEKAKRGESLRKKLLEEEYEMPFADKRNVGPRQTPDWTPEKIDE-ANRKRG------EALEW--ARRARDGEFRKDDDERAAVEGSLRIYASIACLFVSFAFGRSTPAALSLAGINASGEGGLL---LDILQVPA-LALVAAGIGSSIVSGVVLAPGKNRSSLTWFLKGLLGGPLAVLKLREL-ERLKTRGESQE 407
BLAST of mRNA_L-elsbetiae_contig7679.16608.1 vs. uniprot
Match: B7FW49_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FW49_PHATC) HSP 1 Score: 76.6 bits (187), Expect = 2.790e-11 Identity = 100/356 (28.09%), Postives = 159/356 (44.66%), Query Frame = 1 Query: 232 DWPVLEAELKAYLAERQ-AGNPENS----GDVKPRGAGGALLNFLSVNPTEMALENEPDKDEWDGEADVLSYSELTRYGYGYLIEPMMNSGGYVAASERMGIDLNT--RTLKDNEYYERVNPTVGLDMNKKADKDGFLTLGSAREERLNSVANVDREERKKSLFEKQAMMDKNAKAEKSAARQAGLLNP----KRKTPVSLGGRTQKELDEELYRKPGLPEEQRDISEWVPAVRAED--AGPPQPLLLNFAQRANAVAVCGCLALAFGKGTVDALETGLLPREVAEIAV---------PASLFLLGLNVASAAVGASI-----AKSKARSVPLWVFKGALAGLPSVLELKGLPELV 1218 D L+ +L YLA+R+ G E + G V G A+L F+S+ P + + P ++ L Y ELT+YGYG+L+ P+MN+GG + + +GID R E + V +G N KA G L +G ++ + + +RKK ++ + +SA + G + P + +P S T + +DEE R Q ++W R P + L LNF QR ++ ++ AFG+ T L L A+++V PA F+L A++G+SI +KSK RS +W KG L G +V +L+ L L+ Sbjct: 65 DLEELKLQLIEYLAKRKDVGADEKAKEDVGKVIGGSKGNAVLEFVSLAPNKGQVIETP--------SNALDYDELTKYGYGHLVTPIMNAGGRLEMYKLLGIDAPAVKRPPPPPEAPKLVVDRIGE--NDKARYSG-LRMGLLNDDAMAEA--LQEAQRKK----------RSGEPLRSALVEEGFVRPFADKRNVSPKSTPEWTPERIDEETKR-------QGRSNDWARRAREGQFVRDPMESLDLNFQQRVFSIFSALLVSTAFGRSTPIFLSQ-YLGDSTAKLSVLSFLSALQAPAGAFVL------ASIGSSIFCVVSSKSKNRSAIVWFIKGLLGGPLTVGQLRELDSLL 383
BLAST of mRNA_L-elsbetiae_contig7679.16608.1 vs. uniprot
Match: B5YNF0_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YNF0_THAPS) HSP 1 Score: 73.6 bits (179), Expect = 2.740e-10 Identity = 96/356 (26.97%), Postives = 146/356 (41.01%), Query Frame = 1 Query: 244 LEAELKAYLAERQAGNPENS-----GDVKPRGAGGALLNFLSVNPTEMALENEPDKDEWDGEADVLSYSELTRYGYGYLIEPMMNSGGYVAASERMGID-------LNTRTLKDNEYYERVNPT-----VGLDMNKKADKDGFLTLGSAREERLNSVANVDREERKKSLFEKQAMMDKNAKAEKSAARQAGLLNPKRKTPVSLGGRTQKELDEELYRKPGLPEEQRDISEWVPAVRAEDA--GPPQPLLLNFAQRANAVAVCGCLALAFGKGTVDALET-GLLPREVAEIAVPASLFLLGLNVASAAVGASI-AKSKARSVPLWVFKGALAGLPSVLELKGLPELVPTLVGSQESS 1248 L+ EL YL +R+ N + + G V G +L+F+S +P + ++ E DV Y ELT+YGY YL+ P+M +GG A + M + L + +R T GL M+ D D +G A EE V E +K L E+ ++ K RQ L P++ LDE RK G + W R + P + L + R ++ V +ALAFG T AL G+ ++ ++ +L LL S + A + A K RS +W KG G S+ +L+ L +L+ +G ESS Sbjct: 82 LKVELAEYLRKREEANADEAAKSEVGKVIGGTRGNIVLDFVSGSPNKQRVQEEA--------PDVFDYDELTKYGYSYLVTPIMKNGGRRAMYQLMNLPEPATPERLTKKKSAPKLVIDRTGETDKARYTGLKMSAAMDDDA---MGKALEEAARKVKQG--ESLRKKLVEEDYVLPYADNTNKGP-RQTPLWTPEK-------------LDE-AGRKAG------EAQAWARKARMGELKKDPFEILAVEGELRVYSIVVAFTVALAFGNATPTALRMLGVGSDDMLDVFRVPALALLAAGFGSCLMNALVLAPPKRRSSFVWGLKGLFGGPLSIRQLRELDDLMT--IGESESS 401
BLAST of mRNA_L-elsbetiae_contig7679.16608.1 vs. uniprot
Match: A0A8J2S627_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S627_9STRA) HSP 1 Score: 66.6 bits (161), Expect = 3.070e-8 Identity = 86/330 (26.06%), Postives = 141/330 (42.73%), Query Frame = 1 Query: 238 PVLEAELKAYLAERQAGNPENS----GDVKPRGAGGALL----NFLSVNPTEMALENEPDKDEWDGEADVLSYSELTRYGYGYLIEPMMNSGGYVAASERMGIDLNTRTLKDNEYYERVNPTVGLDMNKKADKDGFLTLGSAREERLNSVANVDREERKKSLFEKQAMMDKNAKAEKSAARQAGLLNPKRKTPVSLGGRTQKELDEELYRKPGLPEEQRDISEWVPAVRAEDAGPPQPLLLNFAQRANAVAVCGCLALAFGKGTVDALETGLLPREVAEIAVPASLFLLGLNVASAAVGASIAKSKARSVPLWVFKGALAGLPSVLELKG 1203 P LEA++K+YLA R N+ G G + N+L T + + D+ E D LSY+EL +YG+G L++P+M++GGY A S+ +G+ ++ R P D+ ++ + G ++LG + EE++ + ++ Q +DK AKA + K P ++EL R+P + ++E + E PL L FA RA AV + T L+ L ++ ++A P +L NVA+A G + + R P + AL G P VL +G Sbjct: 37 PALEADIKSYLAVRDQALRTNTTVDRGQEIREGTENNPVWQGANYLLSLDTFLPKDGNLDEYGRVKEVDALSYTELEKYGFGKLVQPIMDAGGYAAVSKALGVAVSA---------PRAPPVPSDDVVREGPQRG-VSLGGSIEEKMAEIGKLNAT---------QIKLDKEAKA--AXXXXXXXXXXXXKPP-------REELVVRTTRRP------KKVTEAPKVEKREWPAAAAPLSLGFAPRAYAVLALLLVGAPGAPATAQLLQQVGLSGDLGDLA-PVGAAVLAANVAAA--GVVVFRGSER--PAFAALRALVGGPLVLLEEG 327
BLAST of mRNA_L-elsbetiae_contig7679.16608.1 vs. uniprot
Match: A0A8J6C0T9_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C0T9_DIALT) HSP 1 Score: 65.5 bits (158), Expect = 7.490e-8 Identity = 98/342 (28.65%), Postives = 132/342 (38.60%), Query Frame = 1 Query: 190 MAGPNQGQKPGFFADWPVLEAELKAYLAERQAGNPENSGDVKPRGAGGALLNFLSVNPTEMALENEPDKDEWDGEADVLSYSELTRYGYGYLIEPMMNSGGYVAASERMGIDLNTRTLKDNEYYERVNPTVGLDMNKKADKDGFLTLGSAREERLNSVANVDREERKKSLFEKQAMMDKNAKAEKSAARQAGLLNPKRKTPVSLGGRTQKELDEELYRKPGLPEEQRDISEWVPAVRAEDAGPPQPLL----LNFAQRANAVAVCGCLALAFGKGTVDALE-TGLLPREVAEIAVPASLFLLGLNVASAAVGASIAKSKARSVPLWVFKGALAGLPSVLELK 1200 MAGP Q P FA LEAEL+A++A A A L+ S+ P L+YSEL+R G L +M++GGY+ S R+G+ L V D ++A K GFL LG AR S E ++ S F A R+ L P++ L EL R P V +D P + LL ++ QRA+AV + LALAFG L+ LL A + + A+ LG A A +A K RS W K ALAG P++ EL+ Sbjct: 47 MAGPRQ---PARFATVEALEAELRAHVAALPA----------------AELDDESLPPP-------------------LAYSELSRNGRDDLARAVMDAGGYIQMSRRLGLRW---ALPKKAAPPPVVEVRNFDP-REALKSGFLKLGEAR-----SATEDVLETKRLSEF---------------ARREPAQLTPQQVGRSKLA---------ELLR-----------PARAPYVSTDDPLPGRQLLVDMQMSLPQRASAVLLAWALALAFGAHPTVPLDGDALLAARGAAVGLAAAHAALG------AYAAVLAAGKGRSAVTWALKAALAGAPALAELR 300
BLAST of mRNA_L-elsbetiae_contig7679.16608.1 vs. uniprot
Match: A0A8J9SH58_PHATR (Hypothetical protein n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9SH58_PHATR) HSP 1 Score: 64.3 bits (155), Expect = 1.240e-7 Identity = 82/290 (28.28%), Postives = 130/290 (44.83%), Query Frame = 1 Query: 415 ADVLSYSELTRYGYGYLIEPMMNSGGYVAASERMGIDLNT--RTLKDNEYYERVNPTVGLDMNKKADKDGFLTLGSAREERLNSVANVDREERKKSLFEKQAMMDKNAKAEKSAARQAGLLNP----KRKTPVSLGGRTQKELDEELYRKPGLPEEQRDISEWVPAVRAED--AGPPQPLLLNFAQRANAVAVCGCLALAFGKGTVDALETGLLPREVAEIAV---------PASLFLLGLNVASAAVGASI-----AKSKARSVPLWVFKGALAGLPSVLELKGLPELV 1218 ++ L Y ELT+YGYG+L+ P+MN+GG + + +GID R E + V G N KA G L +G ++ + + +RKK ++ + +SA + G + P + +P S T + +DEE R Q ++W R P + L LNF QR ++ ++ AFG+ T L L A+++V PA F+L A++G+SI +KSK RS +W KG L G +V +L+ L L+ Sbjct: 8 SNALDYDELTKYGYGHLVTPIMNAGGRLEMYKLLGIDAPAVKRPPPPPEAPKLVVDRTGE--NDKARYSG-LRMGLLNDDAMAEA--LQEAQRKK----------RSGEPLRSALVEEGFVRPFADKRNVSPKSTPEWTPERIDEETKR-------QGRSNDWARRAREGQFVRDPMESLDLNFQQRVFSIFSALLVSTAFGRSTPIFLSQ-YLGDSTAKLSVLSFLSALQAPAGAFVL------ASIGSSIFCVVSSKSKNRSAIVWFIKGLLGGPLTVGQLRELDSLL 268
BLAST of mRNA_L-elsbetiae_contig7679.16608.1 vs. uniprot
Match: A0A0G4H5C6_VITBC (Guanylate kinase-like domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4H5C6_VITBC) HSP 1 Score: 59.7 bits (143), Expect = 1.280e-5 Identity = 43/128 (33.59%), Postives = 62/128 (48.44%), Query Frame = 1 Query: 196 GPNQGQKPGFFADWPVLEAELKAYLAERQ----AGNPENSGDVKPRGAGGALLNFLSVNPTEMALENEPDKDEWDGEADVLS--------------YSELTRYGYGYLIEPMMN-SGGYVAASERMGI 522 GPN+ Q+ FF + LE+E++ YL +R+ G P GD G GG L F+ + D DG+ LS Y EL+RYGYGYL++P+M GGY+ S+R+ + Sbjct: 14 GPNRHQQSAFFGSFDALESEVQHYLGDRERQIITGAPAAEGD---HGNGG-LQAFIRWPFGRSERHRQGDS---DGQQSPLSAQDVRERLARAPLEYGELSRYGYGYLVDPIMRYHGGYIRVSQRLNL 134 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7679.16608.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7679.16608.1 >prot_L-elsbetiae_contig7679.16608.1 ID=prot_L-elsbetiae_contig7679.16608.1|Name=mRNA_L-elsbetiae_contig7679.16608.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=422bp MWLRVLSVILCTTGAGGFYLSFSRPTHLATLGLKPCTTTSGACHASRCPRback to top mRNA from alignment at L-elsbetiae_contig7679:3079..7689+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7679.16608.1 ID=mRNA_L-elsbetiae_contig7679.16608.1|Name=mRNA_L-elsbetiae_contig7679.16608.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4611bp|location=Sequence derived from alignment at L-elsbetiae_contig7679:3079..7689+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7679:3079..7689+ >mRNA_L-elsbetiae_contig7679.16608.1 ID=mRNA_L-elsbetiae_contig7679.16608.1|Name=mRNA_L-elsbetiae_contig7679.16608.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2532bp|location=Sequence derived from alignment at L-elsbetiae_contig7679:3079..7689+ (Laminarionema elsbetiae ELsaHSoW15)back to top |