mRNA_L-elsbetiae_contig7670.16605.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig7670.16605.1
Unique NamemRNA_L-elsbetiae_contig7670.16605.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig7670.16605.1 vs. uniprot
Match: A0A6H5JCD9_9PHAE (FCP1 homology domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCD9_9PHAE)

HSP 1 Score: 409 bits (1052), Expect = 9.740e-142
Identity = 198/207 (95.65%), Postives = 203/207 (98.07%), Query Frame = 1 
Query:    7 EMLCERTRVLAKRQKLVGLSVGGRPAADDCPLERIRLKTPHRFILMGTPEAEIFVDPGEKADLPEVFDDFDLDVSHASEAWRQAIENSDNLAKFTEKTELHFMNPPREGKALLVLDLDHTLLDFTTRETTSPEQMKRPHMDSFLTAVYEHYDLAIWSQTSWRWLELKLTELGFLNNPNYRICTVLDKTSMFGVTSTKKDGEQKRHHV 627
            E+LCE+TRVLAKRQKLVGLSVGGRPAADDCPLERIRLKTPHRFILMGTPEAEIFVDPGEK DLPEVFDDFDLDVSHASEAWRQAIENSDNLAKFTEKTELHFMNPPR+GKALLVLDLDHTLLDFTTRET SPEQMKRPHMDSFLT VYEHYDLAIWSQTSWRWLELKLTELGFLNNPN+RICTVLDKTSMFGVTSTKKDGEQ+RH V
Sbjct:   84 EILCEKTRVLAKRQKLVGLSVGGRPAADDCPLERIRLKTPHRFILMGTPEAEIFVDPGEKEDLPEVFDDFDLDVSHASEAWRQAIENSDNLAKFTEKTELHFMNPPRDGKALLVLDLDHTLLDFTTRETASPEQMKRPHMDSFLTTVYEHYDLAIWSQTSWRWLELKLTELGFLNNPNFRICTVLDKTSMFGVTSTKKDGEQRRHQV 290
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BLAST of mRNA_L-elsbetiae_contig7670.16605.1 vs. uniprot
Match: D7FKN5_ECTSI (FCP1 homology domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKN5_ECTSI)

HSP 1 Score: 400 bits (1028), Expect = 2.920e-139
Identity = 195/207 (94.20%), Postives = 201/207 (97.10%), Query Frame = 1 
Query:    7 EMLCERTRVLAKRQKLVGLSVGGRPAADDCPLERIRLKTPHRFILMGTPEAEIFVDPGEKADLPEVFDDFDLDVSHASEAWRQAIENSDNLAKFTEKTELHFMNPPREGKALLVLDLDHTLLDFTTRETTSPEQMKRPHMDSFLTAVYEHYDLAIWSQTSWRWLELKLTELGFLNNPNYRICTVLDKTSMFGVTSTKKDGEQKRHHV 627
            E+L E+TRVLAKRQKLVGLSVGGRPAADDCPLERIRLKTPHRFILMGTPEAEIFVDP EK DLPEVFDDFDLDVSHASEAWRQAIENSDNLAKFTEKTELHFMNPPR+GKALLVLDLDHTLLDFTTRET SPEQMKRPHMDSFL+ VYEHYDLAIWSQTSWRWLELKLTELGFLNNPN+RICTVLDKTSMFGVTSTKKDGEQ+RH V
Sbjct:    6 EILREKTRVLAKRQKLVGLSVGGRPAADDCPLERIRLKTPHRFILMGTPEAEIFVDPREKEDLPEVFDDFDLDVSHASEAWRQAIENSDNLAKFTEKTELHFMNPPRDGKALLVLDLDHTLLDFTTRETASPEQMKRPHMDSFLSTVYEHYDLAIWSQTSWRWLELKLTELGFLNNPNFRICTVLDKTSMFGVTSTKKDGEQRRHQV 212
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BLAST of mRNA_L-elsbetiae_contig7670.16605.1 vs. uniprot
Match: A0A836CHP5_9STRA (HAD-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHP5_9STRA)

HSP 1 Score: 280 bits (715), Expect = 1.050e-91
Identity = 140/214 (65.42%), Postives = 169/214 (78.97%), Query Frame = 1 
Query:   10 MLCERTRVLAKRQKLVGLSVGGRPAADDCPLERI-RLKTPHRFILMGTPEAEIFVDPGEKADLPEVFDDFDLDVSHASEAWRQAIENSDNLAKFTEKTELHFMNPPREGKALLVLDLDHTLLDFTTRE-------TTSPEQMKRPHMDSFLTAVYEHYDLAIWSQTSWRWLELKLTELGFLNNPNYRICTVLDKTSMFGVTSTKKDGEQKRHHV 627
            ML E+T VL KRQKL+GLS+ G+PA+D+ PL  + +LK PHRFILMGTPEA+IFVDP +  +LPEVFDDFDL+++  SE WR AIENS+NLA+FTE TE+HF++ PREGK LLVLDLDHTLLDF+ R              +KRPHMD+FLTAVY  YDLA+WSQTSWRWLELKLTELG L +P Y+I  VLDKTSMF VTST + G+++RH V
Sbjct:    1 MLQEKTNVLMKRQKLIGLSINGKPASDETPLTHLSKLKNPHRFILMGTPEADIFVDPQDCQELPEVFDDFDLEMAPHSEQWRHAIENSENLARFTETTEVHFIHQPREGKRLLVLDLDHTLLDFSGRSGGTDAGLVADRVSLKRPHMDAFLTAVYAEYDLAVWSQTSWRWLELKLTELGLLYHPAYKISFVLDKTSMFHVTSTDRAGKERRHQV 214
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BLAST of mRNA_L-elsbetiae_contig7670.16605.1 vs. uniprot
Match: A0A4D9CWG5_9STRA (FCP1 homology domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CWG5_9STRA)

HSP 1 Score: 252 bits (643), Expect = 6.160e-79
Identity = 125/214 (58.41%), Postives = 162/214 (75.70%), Query Frame = 1 
Query:   22 RTRVLAKRQKLVGLSV-GGRPAADDCPLERIRLKT---PHRFILMGTPEAEIFVDPGEKADLPEVFDDFDLDVSHASEAWRQAIENSDNLAKFTEKTELHFMNPPREGKALLVLDLDHTLLDFTTRETT--------SPEQMKRPHMDSFLTAVYEHYDLAIWSQTSWRWLELKLTELGFLNNPNYRICTVLDKTSMFGVTSTKKDGEQKRHHV 627
            +TRVL ++QK++GL++ GG+ A ++  L+++ +K    P RF+L+GTPEAE+FVDP EK  LPEVFDDFDLDV+  SE WR++++NS+NL KFT KT++H +NPPR+GK LLVLDLDHTLLDF++RE          +   MKRPH+D+FL AVY +YDL  WSQTSWRWLE+K+ ELG L +P YR C VLDKTSMF V STK DG   +H V
Sbjct:   99 KTRVLPEKQKIIGLTIQGGKVAKNEHTLDQLVVKDKRGPVRFMLIGTPEAEVFVDPHEKESLPEVFDDFDLDVTALSEGWRRSVQNSENLRKFTAKTQVHLINPPRDGKRLLVLDLDHTLLDFSSREDVIDRLPMAEAASVMKRPHLDAFLAAVYPYYDLVAWSQTSWRWLEIKMVELGLLTHPAYRFCFVLDKTSMFHVESTKGDGSLFKHQV 312
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BLAST of mRNA_L-elsbetiae_contig7670.16605.1 vs. uniprot
Match: B7FS87_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FS87_PHATC)

HSP 1 Score: 230 bits (587), Expect = 4.090e-71
Identity = 127/228 (55.70%), Postives = 150/228 (65.79%), Query Frame = 1 
Query:   10 MLCERTRVLAKRQKLVGLSV---GGRPAADDCPLERIRLKTP---------HRFILMGTPEAEIFVDPGEKADLPEVFDDFDLDVSHASEAWRQAIENSDNLAKFTEKTELHFMNPPREGKALLVLDLDHTLLDFTTRE-----TTSPEQ-----MKRPHMDSFLTAVYEHYDLAIWSQTSWRWLELKLTELGFLNNPNYRICTVLDKTSMFGVTSTKKDGEQKRHHV 627
            ML E+TR+L KRQKLVGL     G +   D  PL  +++K           H FILMGTPE +IFVDP +  DLP+V DDFDLD+       +Q I N D L KFTEKT +H M+PPREGK LLVLDLDHTLLDF+++      +T P Q     MKRP MD FL   Y+HYDL +WSQTSWRWLE KLTELG L  P YR C VLDKTSMF +TS ++DG   +HHV
Sbjct:   81 MLQEKTRILPKRQKLVGLVAQQGGAKSVVDALPLSSLKVKGKSTGNNGEIIHHFILMGTPEEDIFVDPRDHPDLPDVMDDFDLDLDP-----QQHI-NQDLLLKFTEKTAIHIMHPPREGKPLLVLDLDHTLLDFSSKTLQRDGSTLPGQGLAAAMKRPFMDDFLAICYQHYDLVVWSQTSWRWLETKLTELGMLTQPRYRFCFVLDKTSMFQITSKRRDGASVQHHV 302
[Close]
BLAST of mRNA_L-elsbetiae_contig7670.16605.1 vs. uniprot
Match: A0A7R9ZLA6_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZLA6_9STRA)

HSP 1 Score: 228 bits (582), Expect = 1.660e-70
Identity = 118/233 (50.64%), Postives = 152/233 (65.24%), Query Frame = 1 
Query:    7 EMLCERTRVLAKRQKLVGLSVGGR-PAADDCPLERIRLKTP--------------HRFILMGTPEAEIFVDPGEKADLPEVFDDFDLDVSHASEAWRQAIENSDNLAKFTEKTELHFMNPPREGKALLVLDLDHTLLDFTTRETTSPEQ-----------MKRPHMDSFLTAVYEHYDLAIWSQTSWRWLELKLTELGFLNNPNYRICTVLDKTSMFGVTSTKKDGEQKRHHV 627
            E+L ++TRVL KRQKL+GL++  + P +DD  L+ +++K                H+FILMGTPE +IFVDPG++ DLP+V DDFDLD +  S+ W   + N   L KFT  T++  M+ PR+GK LLVLDLDHTLLDF+++                  MKRP MD FLT  Y++YDL +WSQTSWRWLE KLTELG L +P YR C VLDKTSMF V ST+++G    HHV
Sbjct:   49 ELLQQKTRVLPKRQKLIGLALQNKGPVSDDVMLKALKVKASNKKANAASASAGVVHQFILMGTPEKDIFVDPGDRDDLPDVVDDFDLDFNAGSDEWLNHVANDGKLKKFTASTQIPIMSQPRQGKPLLVLDLDHTLLDFSSKSLQQDSASHAVGAGAAAVMKRPFMDEFLTNAYKYYDLVVWSQTSWRWLETKLTELGMLIHPGYRFCFVLDKTSMFTVKSTRRNGTSVNHHV 281
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BLAST of mRNA_L-elsbetiae_contig7670.16605.1 vs. uniprot
Match: A0A1Z5KH34_FISSO (Protein phosphatase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KH34_FISSO)

HSP 1 Score: 226 bits (575), Expect = 2.670e-69
Identity = 120/230 (52.17%), Postives = 149/230 (64.78%), Query Frame = 1 
Query:   10 MLCERTRVLAKRQKLVGLSV---GGRPAADDCPLERIRL----------KTPHRFILMGTPEAEIFVDPGEKADLPEVFDDFDLDVSHASEAWRQAIENSDNLAKFTEKTELHFMNPPREGKALLVLDLDHTLLDFTTRETT-----------SPEQMKRPHMDSFLTAVYEHYDLAIWSQTSWRWLELKLTELGFLNNPNYRICTVLDKTSMFGVTSTKKDGEQKRHHV 627
            +L ERTRVL KRQKLVGL     G +   D  P+  ++           +T H+FILMGTPE  IFVDP +  +LP+V +DFDLD +  SE W + + N +NL KFT  T +H MNPPR+GK LLVLDLDHTLLDF++R              + + MKRPHMD FLT +Y +YDL +WSQTSWRWLE KLTELG +    Y+ C VLDKTSMF VT+T K  + + HHV
Sbjct:   68 ILQERTRVLCKRQKLVGLVANEGGAKGVHDALPIMHLKSNAKLKLTSANRTTHQFILMGTPEESIFVDPDQLDELPDVIEDFDLDFNAGSEEWLRHVANGENLKKFTADTLIHMMNPPRDGKPLLVLDLDHTLLDFSSRSLQRDAVSVQVGQGAAKTMKRPHMDEFLTHMYHYYDLVVWSQTSWRWLETKLTELGMIGTA-YKFCFVLDKTSMFTVTTTDKHNQTRTHHV 296
[Close]
BLAST of mRNA_L-elsbetiae_contig7670.16605.1 vs. uniprot
Match: A0A6U9VER5_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A6U9VER5_9STRA)

HSP 1 Score: 211 bits (537), Expect = 1.380e-63
Identity = 115/239 (48.12%), Postives = 145/239 (60.67%), Query Frame = 1 
Query:    7 EMLCERTRVLAKRQKLVGL-SVGGRPAADDCPLERIRLKTP---------------HRFILMGTPEAEIFVDPGEKADLPEVFDDFDLDVSHASEAWRQAIENSDNLAKFTEKTELHFMNPPREGKALLVLDLDHTLLDF----------------TTRETTSPEQMKRPHMDSFLTAVYEHYDLAIWSQTSWRWLELKLTELGFLNNPNYRICTVLDKTSMFGVTSTKKDGEQKRHHV 627
            +++ E+T +L KRQKL+GL ++      D+  L  ++ K+                H FILMGT E +IFVDP +  +LPEV DDFDLD +  SE W   +    NL KFTE TE++ ++ PR  K L+VLDLDHTLLDF                TT++T   E+MKRP MD FL   Y+ YDL +WSQTSWRWLE KL ELG L NP YR C VLDKTSMF VTST + G Q +H+V
Sbjct:   56 DIISEKTNILPKRQKLIGLVTINKVKVTDEVLLSDLKPKSKAMTKISENGTIKSIKHNFILMGTAEVDIFVDPDDHDNLPEVVDDFDLDFNAGSEEWLAHVATGQNLKKFTESTEVNIIHEPRRDKPLMVLDLDHTLLDFSRKSIEQASSAECSTNTTQDTI--ERMKRPFMDEFLAKAYQSYDLVVWSQTSWRWLETKLIELGMLANPRYRFCFVLDKTSMFAVTSTSRSGRQVKHYV 292
[Close]
BLAST of mRNA_L-elsbetiae_contig7670.16605.1 vs. uniprot
Match: B8C9B5_THAPS (FCP1 homology domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C9B5_THAPS)

HSP 1 Score: 220 bits (560), Expect = 1.020e-62
Identity = 118/233 (50.64%), Postives = 147/233 (63.09%), Query Frame = 1 
Query:    7 EMLCERTRVLAKRQKLVGLSVGGRPAADDCPLERIRLK------TPHRFILMGTPEAEIFVDPGEKADLPEVFDDFDLDVSHASEAWRQAIENSDNLAKFTEKTELHFMNPPR-----EGKALLVLDLDHTLLDFTTRETTS---------------PEQMKRPHMDSFLTAVYEHYDLAIWSQTSWRWLELKLTELGFLNNPNYRICTVLDKTSMFGVTSTKKDGEQKRHHV 627
            E+L E+T +L KRQKL+GL   G    D+  L  ++ K        H+FILMGT E E+F+DP EK DLP V DDFD D +  S+ W Q      NL +FTEKTE+H + PPR     + K LLVLDLDHTLLDF+T+   S                 Q+KRP+MD FL   Y+HYDL +WSQTSWRWLE+KLTELG L +P Y+IC VLDKTSMF + ST + G++  HHV
Sbjct:   48 ELLREKTGILPKRQKLIGLKGKG-AVTDETLLSDLKAKGGGNGVVTHQFILMGTREEEVFIDPSEKEDLPYVIDDFDFDFNAGSDEWVQHKAKETNLNQFTEKTEVHIITPPRISADNKHKPLLVLDLDHTLLDFSTKTLRSNGHSASHIGSSDDAVANQLKRPYMDEFLQWAYKHYDLVVWSQTSWRWLEVKLTELGMLTHPGYKICFVLDKTSMFQIVSTNRSGKKVTHHV 279
[Close]
BLAST of mRNA_L-elsbetiae_contig7670.16605.1 vs. uniprot
Match: A0A1E7FBW4_9STRA (HAD-superfamily subfamily IIID h n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FBW4_9STRA)

HSP 1 Score: 207 bits (528), Expect = 9.900e-62
Identity = 117/253 (46.25%), Postives = 144/253 (56.92%), Query Frame = 1 
Query:    7 EMLCERTRVLAKRQKLVGLSVGGR-PAADDCPLERIRLKTP------------------HRFILMGTPEAEIFVDPGEKADLPEVFDDFDLDVSHASEAWRQAIENSDNLAKFTEKTELHFMNPPREGKALLVLDLDHTLLDF---------------------------TTRETTSPEQMKRPHMDSFLTAVYEHYDLAIWSQTSWRWLELKLTELGFLNNPNYRICTVLDKTSMFGVTSTKKDGEQKRHHV 627
            +ML E+T VL KRQKL+GL+   +    D   L  ++ K+                   H FILMGTPEA IFVDP +   LPEV DDFDLD +  S+ W   +    NL KFT+ T ++ +  PR GK L+VLDLDH LLDF                           TT+ET   E+MKRP +DSFL   Y+ YDL +WSQTSWRWLE KL ELG L NP YR C VLDKTSMF VTST + G++ +H+V
Sbjct:   86 DMLSEKTNVLPKRQKLIGLTTVTKVKVTDQVLLSELKPKSKAMTTIKTSPDGIATKLVQHNFILMGTPEANIFVDPNDHDGLPEVIDDFDLDFTAGSQQWLAHVATGQNLKKFTDSTAINIIVEPRAGKPLMVLDLDHCLLDFSRKSIERASTAERIAEANGNNTNAATRTTQETI--EKMKRPGLDSFLAKAYQSYDLVVWSQTSWRWLETKLIELGMLTNPQYRFCFVLDKTSMFAVTSTSRSGKEMKHYV 336
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7670.16605.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JCD9_9PHAE9.740e-14295.65FCP1 homology domain-containing protein n=1 Tax=Ec... [more]
D7FKN5_ECTSI2.920e-13994.20FCP1 homology domain-containing protein n=1 Tax=Ec... [more]
A0A836CHP5_9STRA1.050e-9165.42HAD-like domain-containing protein n=1 Tax=Tribone... [more]
A0A4D9CWG5_9STRA6.160e-7958.41FCP1 homology domain-containing protein n=2 Tax=Mo... [more]
B7FS87_PHATC4.090e-7155.70Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A7R9ZLA6_9STRA1.660e-7050.64Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A1Z5KH34_FISSO2.670e-6952.17Protein phosphatase n=2 Tax=Fistulifera solaris Ta... [more]
A0A6U9VER5_9STRA1.380e-6348.12Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
B8C9B5_THAPS1.020e-6250.64FCP1 homology domain-containing protein n=1 Tax=Th... [more]
A0A1E7FBW4_9STRA9.900e-6246.25HAD-superfamily subfamily IIID h n=1 Tax=Fragilari... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7670contigL-elsbetiae_contig7670:89..5487 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score404.8
Seed ortholog evalue2.4e-110
Seed eggNOG ortholog2880.D7FKN5
KEGG koko:K17618
Hectar predicted targeting categoryother localisation
EggNOG free text desc.phosphoprotein phosphatase activity
EggNOG OGsCOG5190@1,KOG1605@2759
EC3.1.3.16
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01009
Exons6
Model size636
Cds size636
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7670.16605.1prot_L-elsbetiae_contig7670.16605.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig7670 89..5487 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816852.4825897-CDS-L-elsbetiae_contig7670:88..2441622816852.4825897-CDS-L-elsbetiae_contig7670:88..244Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7670 89..244 +
1691683862.1627243-CDS-L-elsbetiae_contig7670:88..2441691683862.1627243-CDS-L-elsbetiae_contig7670:88..244Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7670 89..244 +
1622816852.4928079-CDS-L-elsbetiae_contig7670:1298..13531622816852.4928079-CDS-L-elsbetiae_contig7670:1298..1353Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7670 1299..1353 +
1691683862.1798995-CDS-L-elsbetiae_contig7670:1298..13531691683862.1798995-CDS-L-elsbetiae_contig7670:1298..1353Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7670 1299..1353 +
1622816852.5049329-CDS-L-elsbetiae_contig7670:3239..33311622816852.5049329-CDS-L-elsbetiae_contig7670:3239..3331Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7670 3240..3331 +
1691683862.1892154-CDS-L-elsbetiae_contig7670:3239..33311691683862.1892154-CDS-L-elsbetiae_contig7670:3239..3331Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7670 3240..3331 +
1622816852.5167913-CDS-L-elsbetiae_contig7670:3927..40111622816852.5167913-CDS-L-elsbetiae_contig7670:3927..4011Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7670 3928..4011 +
1691683862.1989322-CDS-L-elsbetiae_contig7670:3927..40111691683862.1989322-CDS-L-elsbetiae_contig7670:3927..4011Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7670 3928..4011 +
1622816852.5297637-CDS-L-elsbetiae_contig7670:5023..51811622816852.5297637-CDS-L-elsbetiae_contig7670:5023..5181Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7670 5024..5181 +
1691683862.211675-CDS-L-elsbetiae_contig7670:5023..51811691683862.211675-CDS-L-elsbetiae_contig7670:5023..5181Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7670 5024..5181 +
1622816852.5462022-CDS-L-elsbetiae_contig7670:5396..54871622816852.5462022-CDS-L-elsbetiae_contig7670:5396..5487Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7670 5397..5487 +
1691683862.2286305-CDS-L-elsbetiae_contig7670:5396..54871691683862.2286305-CDS-L-elsbetiae_contig7670:5396..5487Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7670 5397..5487 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig7670.16605.1

>prot_L-elsbetiae_contig7670.16605.1 ID=prot_L-elsbetiae_contig7670.16605.1|Name=mRNA_L-elsbetiae_contig7670.16605.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=212bp
MQEMLCERTRVLAKRQKLVGLSVGGRPAADDCPLERIRLKTPHRFILMGT
PEAEIFVDPGEKADLPEVFDDFDLDVSHASEAWRQAIENSDNLAKFTEKT
ELHFMNPPREGKALLVLDLDHTLLDFTTRETTSPEQMKRPHMDSFLTAVY
EHYDLAIWSQTSWRWLELKLTELGFLNNPNYRICTVLDKTSMFGVTSTKK
DGEQKRHHVST*
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mRNA from alignment at L-elsbetiae_contig7670:89..5487+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig7670.16605.1 ID=mRNA_L-elsbetiae_contig7670.16605.1|Name=mRNA_L-elsbetiae_contig7670.16605.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5399bp|location=Sequence derived from alignment at L-elsbetiae_contig7670:89..5487+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCAGGAAATGCTCTGCGAGAGAACGCGCGTGCTGGCCAAGCGCCAAAA
ACTCGTCGGTCTTAGCGTCGGAGGACGACCAGCAGCTGACGACTGCCCGT
TAGAGCGGATTCGCCTCAAGACTCCGCACAGATTTATCTTGATGGGCACC
CCGGAGGTGTGTGTGTGTGTGTGTGTGTGCTGGTGTGTGCTGGTGTGTGC
GTGTACGCGCGCGCGTGTGGCGCGTCTTTTCTGAACTGGAATCGACCGCG
CTGACCGATTAGCCAGTGCAAGGTGCTAATCTTGGATCTTCCGAGGGAAA
AACCAGAAGAGCCACCTTTTAGGCTGTCGTCGCAACAGGATCCCCGGTCC
GCGACGGAGACGTGTCTGACCGAAATGGAATTCGGGATAGACCAAGGCCG
AAGCTGCACAGCACTGAAACAAACACCCTGCTGTACTGGCACGACCATGC
CGCACTGCTTCACCGCCCCCATAGTTGTCTCTTTTCTTCATCTGCCCGCC
CGGTTTTCATTCTGCTTCTGGCTTGTATTTTCGTATTTTGATCTCTCTCC
TCTTCCTTTTCTCTCTTCCTCGCGTGTATCTACCGATGGTTGCGGACGTT
TCATTTCGTGTCCAAAGCCTCGCTGTCTCCTACACCTCCTCTCCGATGAT
TTCTCGCCGTCAGCGCACCTTCGTACTCTTTGTCTTCTGTGCTATTTGCA
TAGATACATACATGGGGGGAGACATGCCCCCCTACACGGTATTTTATTGG
CCCTGCAATATGATGCTGTTTTTGTTCAAATATCTCGGTGTTCGTGGTTG
CGTCTCCTCTCTTTGGATCTGTTGGGTGTACCCCCGCTCTCGGTGTGTGT
GTGTGGTGTGTGTGTGTGTTGCGTCTACTCTACAATCACTAGCGCCAGTT
TACGCCTTGGTTAGATGTCTGGTAGATCAGCCAAGGTGGCAAGAGACAGG
CAAACAAGCAGACAGACACAGAGAGAGAGCGAGCGAGAGAGAGAGAGAGA
CGCCAAAGGTGTTTCACTCCAGCCTTAAGCTCGAGAAAAGTTCTCCAGTC
AATTCCCTCCTTTTCAGTGTACACCCCCGTCCGTACATAAATACCGTTTT
GCTCTGTATGTTTTTTTCTGTCGTCGTTCGCTGCGTTTTTTTGTCCGTTT
TTCCTTGTCGCCGGTCATACTGCCTTTTCTCTCCTTTTTTCGTTTCCTCT
CCTTATCCAGGCGGAGATTTTTGTGGACCCCGGCGAGAAAGCTGACTTGC
CAGAGGTTTTTGACGGTATGCCCGTGTTTTCTAACAAGTGTCTACAAATG
TCAGCAGTCTACGTCCAGTCTGTGAAAAAGTCGTTCCAGGGGGGGCTGTT
GTAGGCAAAACCAACCCTCCCTCACCATCCGAGCTACTCGCACAAAATCC
GTAATCCGTACAAGGTTTAGCCGCTTGCGCGGCCCCGCTATATTGAAAGC
GCTTCCAAGGTATTGCTAAATATCTACTTCCTGTGGAGTGCGGCTGTTGT
CCAAAAGTTTTTACAACGGAGTGGCACAATAGCTGGGATGGAAACACCAA
ACGGCAGTTGCTTTTTGAACGTAGAATACAGTGTAGACTTCCGAGAACAC
CCGTCAGCAGGAGGCCATCAATGCCTACTTTTTTTCCACAAGCGACCACA
TTTGACGGCGCTGCCGCGAGTGTACCCGCGTGCTCAACAATACGCATGTT
GTGTACATAGAGGGCCTCGCAGGGTACATCCCTTCGGCACATTCACCATT
TTTCGGCGAATAAAAGCGGAGTTTCATGCGAGAGTCCATTTTTCGGAGAT
TTAGTTCGGATCTATATTTCCACCGCACGCATGAGAAATACCATCCCGAC
CAATATAAATGGCAAGAGACAGAGACCGAGACGGGAAAAGAGGCTGTTGT
ACCGTGGGGAAGAGATGCGAGAGTGAGAAGGCTTGGGTTCACGGTGTGAA
AGAAGGGTGTATGGCCAGCCACCGAGGAGGTGCTGGTGGGAGCGGAGCGA
GAACAACTTTAGACGGCAAGATATCCAAAATTCCGAAATGAAGCCCTCTC
GTGCGTGGCATCCCCGAGCTACGGGTATCAGCGACGACAAATCATGGAGA
TAGACGCAGATCGAGGGGTTCACATAAATGAAGAGAGAAGAGAAGCGTAT
CATACCCAGCTGGGTAGATATCGTGGACACGGGGTACAGCTCGAACAAAA
GATTCGAAACAAAATGCCCGACACACTCCTTTAGATTACGCATCTGAAAA
AACACTCAAGAAGAGAACGTGGGAACACGGCGAATAAAATCGGAGTTTCA
AGCCAGAGTCAAATTTCTAAAAAATCCTTGTCTGGAGCAGTTGAGCGTGA
CAGACAGAAGAGACAGACACGGGAAGAGAGGGACCTGCACGGTGGGGAAG
TGAGCGAGAGTGAGAAGGCTTGAATTGTACTGTGGAGGGTGTGTAGCCAC
GGAGGAGGTGCTGACAATGTGGGAGCGGAGCGAGAGCAACTTCAGACCGC
AGGATATCCAGAATTCCGAAGTAGAGGCCTCTCGTGCGTGACATTCCAGG
CCGCTCAGGAATAACGTACATAATTCTAAAGAGATCTATATACAGTTTAA
AATAGTATATACAGAGTACAATTTTTGTGTGGGTATGCCTCTCCCTTCGT
GTTGGGAGCGGGCTGAAGTGGCTTGGAGGGAAGATTCGCCTGTCACCAAG
CATCCGAGCGGGCGGCGCTTCGGCATTCCGATTTTCGCGGCTGCGGTCTC
CTTTGTAGTTAGGCCAGGCTTCCCTCGTGACCGTGCTGCTCCGTCGTTTT
CGGCGACCAGCGGCGCTACTCGCTCGCGCCGGATGGGGCAAAAGAGTGTA
CCGTAGCGTACGATGGTCTTTGATGGTTGTATATACACGTGCGCAAAGCA
ACACGAGCCCTGGCTGTCAGCTCTGCGATCGATAGATACTGTAGTAGACT
AGGTAAACTGTAGCCGTCGTTTGCTGCACCACCTTCTTCTGCCCCACGTG
GTATCTATATCTAGTCTACATTGTCTCTCTCGTGTGCACCCAACCTCGGA
TTTGGTCTTTATCTTGTCTCTTCCGCGTGCACCCTACTTGAATACCTCTG
ACGGGGGCAAGATTCTCTTCCATGGGTTCCGCGTGTTTTGGTATCTTACA
GACTTCGATCTGGACGTGTCCCACGCTAGCGAGGCCTGGAGGCAGGCGAT
TGAGAACTCGGACAACTTGGCCAAGTTTACGGAGAAGACGGAGGTTTGTA
GGCATGCAGGCAGGCAGAAAAGCAGGGTTTTGGTTCTTGCCGACGGACGA
CAGGACGAGGGGGCCTGCATGCCCCGCCTCTGTGCGGAGGGGGGGGGATC
GCGAGAGGGATCGAATGTTGTTTGTTGAGGCTGAGTGGGGTGTCCTTGCC
AGTCCGACAAACGTTACGCACGCCTTTGCGGGGAGCAACTGCCTCAGTTG
TTGGTGGAGAGCTAGTTCACAACTATTTACGCCGCTGATTTTGGGAGCTA
TGTATGGTTATGTTCGCCGGTTTGGAGTTAAACTTTATTTTGTTGTACGT
GGTTTTACACGTGGATCGATCCAGTGCCAAGCGACTTCATCCACCTAGGT
AGAGGACCCTCCCCTCCCCTCCCGCCAGGTGTCGGTGCTACACCTTCCAC
GCCCACAACCACCCGTTCCATATTAGTACCACGATGTCCCTCCTCATTTT
GTCCTAAGCTGCTGTTGTTTCTGTCCGTCTGTCCGACTGTCTCTCCGTCT
GTCGATCCGCCTGTCGATCCGCCTGTCGATCTGCCTGTCGATCTGCCTGT
CGATCCGCCTGTGGTGTCTATGCGCCTGTCTGGAAACAGCTGCACTTCAT
GAACCCCCCGCGAGAAGGGAAGGCTCTCCTCGTCCTCGACCTCGACCACA
CCTTGCTCGACTTCACCACCCGGGTGCGTGTGCGCTTCACATTTGAAAAA
TAAAAGGGAGGGAGGGGGTGGTGTGTAAAGGGGCGTACTCATCTGCTCGC
CTGCTTGCCTCGGTCGTCTCTACCCCCCCCTCGACGTTTCGAAACACTGA
GCGACGAGGGGTGGATGACACATAGAGAGAGAAGGCAGAGGGTATAAAGA
ACATCGATTCGTTCTGTGTTCGTTTCACACCAGGGTCTGCCTGGAATCGC
GAGAAGCGTGCAGCCGTTTCGTTTGCTCTTGTCCTCAAAACGTGCGTCGT
CAGACCGGTTCTCGGGCGGTTTTGCAGGCCTCCACGCAATTCCCATCCCA
GCCCTTCTTGCCGCGAAGTACAAAACACATTCGAAAGTTATACTCCTATG
TGGCATATAAGTAGTGTGCACCCACGAGGATTATCTAGCCGCTCTGCAGC
AAATAGACTTGCTCAACAAGCGCACGTTCTACGAATGTGCGCGCGTGGCG
GAGAATGCCACACAGCGCGTTCATGAAACCCGCGTCCAAGCGCCAGAGAG
CCCCTCGTAATCTTCTTCTAGAGTATATAGGTAGCAAGCAAATTTGGATC
GTTTGAACACTGAAGAAATATGTGACGAGGGTCACGAGAAGCGTCAAGTT
TTGTGTCGGTGTGACTTAAACGGATGATCAAATGGAGAGAAATGACCTCT
CGGGGTCGGTTCGTCGGTGTCAATACCGCAGGTGACACAAGATACCCCCT
GGACAGATTTTCAAAGCACGATTCCTCCCCAGCAAGAAGAGTGCCAGTGC
CGAAAGGGGGTGGCGTTGGAAGTATCTAGTCGAGGGCTGTCCGAAAATGT
GTCGTTGGGTGCTGGTGCCCTCTTCGTTACGAAGGAATGAAGCTCGAAAA
CTCGGGGTCGGTTGGTCAGTGTAGATAGGTGTAGATAAGTTTAGATGGAA
AAGATGCTGATAGAAATTTGCCTATGGATTCGTGAGGGGTTAAACGTCGT
CATCGGATCGTAAATGGTTGTTTTTTCGCTCGCAGGAAACGACCAGCCCG
GAGCAAATGAAGCGGCCACACATGGACTCCTTCCTTACGGCGGTGTACGA
GCACTACGACCTCGCCATCTGGAGCCAGACGTCCTGGAGGTGGCTCGAGC
TCAAGCTCACGGAGCTCGGGTTCCTCAACAACCCCAACTACCGGTCAGTA
TGTACTCGCAACAACCACCCGCCCTCCCCAACGGTCGTGACTTGTGTGGC
CGCAACACTTTTGCACGAAAAGATGGTAGAACGTGGGGTTGGAGAAAAAG
AGGCATCCGATTATTATCACCGTGCCTCATGTGTACCATCTCCTGTTCCC
ATGTGTCTCTATTGTACGCTTTTCTGTTTTTTTGTTGTGCTCTCCGGTAC
TTCTGTAGGATTTGCACTGTGCTGGACAAAACTAGCATGTTCGGGGTAAC
GTCGACCAAGAAGGATGGAGAGCAGAAGCGCCATCATGTGAGTACGTAG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig7670:89..5487+

>mRNA_L-elsbetiae_contig7670.16605.1 ID=mRNA_L-elsbetiae_contig7670.16605.1|Name=mRNA_L-elsbetiae_contig7670.16605.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1272bp|location=Sequence derived from alignment at L-elsbetiae_contig7670:89..5487+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCAGGAAATGCTCTGCGAGAGAACGCGCGTGCTGGCCAAGCGCCAAAA
ACTCGTCGGTCTTAGCGTCGGAGGACGACCAGCAGCTGACGACTGCCCGT
TAGAGCGGATTCGCCTCAAGACTCCGCACAGATTTATCTTGATGGGCACC
CCGGAGATGCAGGAAATGCTCTGCGAGAGAACGCGCGTGCTGGCCAAGCG
CCAAAAACTCGTCGGTCTTAGCGTCGGAGGACGACCAGCAGCTGACGACT
GCCCGTTAGAGCGGATTCGCCTCAAGACTCCGCACAGATTTATCTTGATG
GGCACCCCGGAGGCGGAGATTTTTGTGGACCCCGGCGAGAAAGCTGACTT
GCCAGAGGTTTTTGACGGCGGAGATTTTTGTGGACCCCGGCGAGAAAGCT
GACTTGCCAGAGGTTTTTGACGACTTCGATCTGGACGTGTCCCACGCTAG
CGAGGCCTGGAGGCAGGCGATTGAGAACTCGGACAACTTGGCCAAGTTTA
CGGAGAAGACGGAGACTTCGATCTGGACGTGTCCCACGCTAGCGAGGCCT
GGAGGCAGGCGATTGAGAACTCGGACAACTTGGCCAAGTTTACGGAGAAG
ACGGAGCTGCACTTCATGAACCCCCCGCGAGAAGGGAAGGCTCTCCTCGT
CCTCGACCTCGACCACACCTTGCTCGACTTCACCACCCGGCTGCACTTCA
TGAACCCCCCGCGAGAAGGGAAGGCTCTCCTCGTCCTCGACCTCGACCAC
ACCTTGCTCGACTTCACCACCCGGGAAACGACCAGCCCGGAGCAAATGAA
GCGGCCACACATGGACTCCTTCCTTACGGCGGTGTACGAGCACTACGACC
TCGCCATCTGGAGCCAGACGTCCTGGAGGTGGCTCGAGCTCAAGCTCACG
GAGCTCGGGTTCCTCAACAACCCCAACTACCGGAAACGACCAGCCCGGAG
CAAATGAAGCGGCCACACATGGACTCCTTCCTTACGGCGGTGTACGAGCA
CTACGACCTCGCCATCTGGAGCCAGACGTCCTGGAGGTGGCTCGAGCTCA
AGCTCACGGAGCTCGGGTTCCTCAACAACCCCAACTACCGGATTTGCACT
GTGCTGGACAAAACTAGCATGTTCGGGGTAACGTCGACCAAGAAGGATGG
AGAGCAGAAGCGCCATCATGTGAGTACGTAGGATTTGCACTGTGCTGGAC
AAAACTAGCATGTTCGGGGTAACGTCGACCAAGAAGGATGGAGAGCAGAA
GCGCCATCATGTGAGTACGTAG
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