mRNA_L-elsbetiae_contig767.16603.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig767.16603.1
Unique NamemRNA_L-elsbetiae_contig767.16603.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig767.16603.1 vs. uniprot
Match: A0A6H5KTP7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTP7_9PHAE)

HSP 1 Score: 81.6 bits (200), Expect = 5.890e-12
Identity = 87/257 (33.85%), Postives = 120/257 (46.69%), Query Frame = 3 
Query: 1920 NQARFIAEKLAAVQYFHRVEAGQEVPIRAPLVNRALKSVEKAHVAVGTRLRVRLLVSLGTVLIC*WSSLSAIVGVPGGAYCGLCLALTCFLVAPSDEMI*L--PRLQRQ*CTRR----IFCNAVTRRFVARTE*TRVCVEVIFTEGTRMTRPNVGTG--RVASSPRSRVGAGGGAVALLVWWN*CRVTSHHLEVHLFARTVGKEIVGTWQIRRIQGGPEGPTPNRI---ESGR*PEACWSTSLRIGAAASVAAGGDI 2657
            N A  I+ KLAAVQYFHRV+   E+P  APL+  +L    + HV  GT+ R R+ VS  T+L      L+A  G  GG    LCL L+ F VA SDE+      +  +  C RR     F        +   + T V V     +G +  +    T    VA    S++GAGGGAVA+LV    C +           R    + +  W      G P+  +  R    ++G  P+     SLRIGAA ++AAGGD+
Sbjct:  621 NVAPTISGKLAAVQYFHRVDKQLELPAGAPLIKGSLLGFARVHVRAGTKSRSRVPVSWETLLE--GQQLTASWGT-GGRVLWLCLTLSYFQVARSDEVCATLSGQCHQVHCLRRSDVEFFDGEDVLAQLHWHKATGVRVRFRGHKGDQSEKGACVTRVREVARGASSQIGAGGGAVAVLVELMACHLALPEDAPLCSFRCRRSKTIKVW------GYPKALSALRQIVDKAGGDPKQVGLHSLRIGAATTLAAGGDV 868
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BLAST of mRNA_L-elsbetiae_contig767.16603.1 vs. uniprot
Match: A0A842IUV8_9FLAO (Gliding motility-associated C-terminal domain-containing protein n=1 Tax=Winogradskyella flava TaxID=1884876 RepID=A0A842IUV8_9FLAO)

HSP 1 Score: 68.9 bits (167), Expect = 5.440e-8
Identity = 56/172 (32.56%), Postives = 81/172 (47.09%), Query Frame = 3 
Query:  390 DGEVPELKNLPIQDLNVTVQECIAPAS--NLVIVSDNDPCFEGGVVVPTDEIEGADNCSFTLTRIWAAEDLSSNSIQAQRTYEVADTEPPVLTGLPAEGLVVQTDDPNFSFSNDTSVAAVDACSGLEVPVVYTESTVLGQVDDACLRTVARTWTAEDGCGNSVSATRTATVE 899
            D   PEL  +P+   N+T+ EC   +S  N    S  D C    +     EI    +   T+TR W A D   N + A +   V DT PP LT +PA+  +  ++D   S +N     A+D C  + +     ++   G       +T+ RTWTA D CGNSVS T+T  V+
Sbjct:  682 DTVAPEL-TIPV---NITI-ECDEDSSPTNTGTASAIDDCATPTITFVDSEIAACGSTK-TITRTWTATDACGNIVSADQIIIVQDTTPPTLT-VPADATIECSEDE--SSTNTGMATAIDTCGSVTITQSDVDTAACGTT-----KTIVRTWTATDECGNSVSETQTIVVQ 839
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BLAST of mRNA_L-elsbetiae_contig767.16603.1 vs. uniprot
Match: A0A0C5WCZ3_9FLAO (Uncharacterized protein n=1 Tax=Siansivirga zeaxanthinifaciens CC-SAMT-1 TaxID=1454006 RepID=A0A0C5WCZ3_9FLAO)

HSP 1 Score: 68.6 bits (166), Expect = 7.010e-8
Identity = 78/271 (28.78%), Postives = 115/271 (42.44%), Query Frame = 3 
Query:  141 SPLANKAIRRLQEGPPT-------------EEDCGSSVIQWGDGVCDARLNTELCKFDGGDCCAQTCVRSLLLPDSCLYFDCVDPSVGADEPVAAFDGEVPELKNLPIQDLNVTVQECIAPASNLV--IVSDNDPCFEGGVVVPTDEIEGADNC--SFTLTRIWAAEDLSSNSIQAQRTYEVADTEPPVLTGLPAEGLVVQTDDPNFSFSNDTSVAAVDACSGLEVPVVYTESTVLGQVDDAC--LRTVARTWTAEDGCGNSVSATRTATV 896
            S  A++ I  +   PPT             +E   S+ +  G   C   + TE       D    TC  +  +  +    D    S  AD+ +   D   P +  +P    +VT+ EC A  S+    + +  D C  G V +   ++    +C  S+ +TR W A D   N+  A +   V DT PP +T +PA+  +  T D + S SN  +    D C      V+ TES V   V   C   +T+ RTWTA D CGNS SA +  TV
Sbjct:  498 STSADQKITVIDTTPPTITVPADVTIECTADESSASNGVATGTDTCGTVIITE------SDVVTTTCGNTKTIIRTWTATDECGNSTSADQKITVIDTTPPTI-TVPA---DVTI-ECTADESSASNGVATGADTC--GTVTITKSDVVTQGDCTNSYIITRTWTATDECGNTTSADQKITVIDTTPPTIT-VPADVTIECTADES-SASNGVATGT-DTCG----TVIITESDV---VTTTCGNTKTIIRTWTATDECGNSTSADQKITV 745
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BLAST of mRNA_L-elsbetiae_contig767.16603.1 vs. uniprot
Match: A0A1V4V1Y0_9EURY (HYR domain protein n=1 Tax=Methanosaeta sp. PtaB.Bin039 TaxID=1811685 RepID=A0A1V4V1Y0_9EURY)

HSP 1 Score: 66.2 bits (160), Expect = 4.210e-7
Identity = 71/261 (27.20%), Postives = 107/261 (41.00%), Query Frame = 3 
Query:  171 LQEGPPTEEDCGSSVIQWGDGVCDARLNTELCKFDGGDCCAQ--TCVRSLLLPDSCLYFDCVDPSVGADEPVAAFDGEVPELKNLPIQDLNVTVQECIAPASNLVIVSDNDPCFEGGVVVPTDEIEGADNCSFTLTRIWAAEDLSSNSIQAQRTYEVADTEPPVLTGLPAEGLVVQTDDPNFSFSNDTSVA-AVDACSGLEVPVVYTESTVLGQVDDACLRTVARTWTAEDGCGNSVSATRTATVEISAVDCTIGVSPAPS 944
            L  GP    D G++        CDA +N           C    T  R+    D+C  F          + +  FDGE P +  +   D+ ++  E I P +     +++D      V        G+    +++ R W AED   N     +T  V DT  PV+   P++  +  +D    S   +T  A A D C    V + Y++    G   D   R++ARTW AED CGN  + T+T TV    VD T+ +   PS
Sbjct: 1866 LTVGPQDPTDPGNTGFATATDNCDASVNITYSDLVTPGVCPDQWTIARTWRAEDNCGNF------ATCTQTITVFDGEPPTI--VCPSDVTISCDESIHPDNTGWAQAEDDSGSPANVTYHDLVTPGSCPDQWSIVRTWRAEDNCGNVATCTQTITVVDTTLPVIV-CPSDVTISCSDS---SLPENTGFATATDNCD-TSVTITYSDLVTPGSCPDQ--RSIARTWRAEDNCGNVATCTQTITV----VDTTLPLIVCPS 2107
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BLAST of mRNA_L-elsbetiae_contig767.16603.1 vs. uniprot
Match: A0A6H5JVP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVP4_9PHAE)

HSP 1 Score: 64.3 bits (155), Expect = 9.240e-7
Identity = 46/118 (38.98%), Postives = 54/118 (45.76%), Query Frame = 3 
Query:   24 SCGSRTMQCLDPAAVQEAPAGCADIRRARALRLEDSEHGSPLANKAIRRLQEGPPTEEDCGSSVIQWGDGVCDARLNTELCKFDGGDCCAQTCVRSLLLPDSCLY--FDCVDPSVGAD 371
            SCG     CLDP    EAP+ C+           DS   SP A        + P    +C   + + GDG CD   N E C +DGGDCCA TCV       +C Y  FDC DPSV  D
Sbjct:  276 SCGYYGYDCLDP----EAPSSCST----------DSPTPSPAAGT------DWP----ECEGYLFEIGDGHCDYYNNNEECDWDGGDCCACTCVSGYY---TCGYYTFDCEDPSVSTD 366
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BLAST of mRNA_L-elsbetiae_contig767.16603.1 vs. uniprot
Match: A0A521UQ29_9BACT (HYR domain-containing protein (Fragment) n=1 Tax=Saprospiraceae bacterium TaxID=2202734 RepID=A0A521UQ29_9BACT)

HSP 1 Score: 63.9 bits (154), Expect = 1.620e-6
Identity = 43/116 (37.07%), Postives = 62/116 (53.45%), Query Frame = 3 
Query:  549 DNCSFTLTRIWAAEDLSSNSIQAQRTYEVADTEPPVLTGLPAEGLVVQTDDPNFSFSNDTSVAAVDACSGLEVPVVYTESTVLGQVDDACLRT----VARTWTAEDGCGNSVSATR 884
            DNC   +   + A D + N   A  TY + DT  P LTG+PA+ ++  +D          +V A+DAC+G  VPV++  S V+  VD     T    + RTWTA DGC N+V+ T+
Sbjct:  173 DNCGMFVDTFFVA-DNAGNIASAVATYVIVDTLAPALTGVPADTMIACSD----PIPPAPAVTALDACAG-SVPVLF--SVVITPVDTGACATYNYNITRTWTATDGCSNTVTDTQ 280
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BLAST of mRNA_L-elsbetiae_contig767.16603.1 vs. uniprot
Match: A0A518LR27_9BACT (HYR domain-containing protein n=1 Tax=Phycisphaerae bacterium RAS2 TaxID=2528035 RepID=A0A518LR27_9BACT)

HSP 1 Score: 62.8 bits (151), Expect = 2.890e-6
Identity = 52/158 (32.91%), Postives = 76/158 (48.10%), Query Frame = 3 
Query:  435 NVTVQ--ECIAPASN--LVIVSDNDPCFEGGVVVPTDEIEGADNCSFTLTRIWAAEDLSSNSIQAQRTYEVADTEPPVLTGLPAEGLVVQTDDPNFSFSNDTSVAAVDACSGLEVPVVYTESTVLGQVDDACLRTVARTWTAEDGCGNSVSATRTATV 896
            NVT+     + P  N  L + +  D C +   V  +DE++G D+CS  + R W   D    S   Q+   + D   PVLT +PA+ +V   DD   S +    + A D C+ L     Y +   +G     C +T+ RTWTA D CGNS +A +  TV
Sbjct:  167 NVTLPCGSSVVPGLNPALTVAAGVDDCDDEVNVSSSDEVQG-DSCSKLIVRTWRVTDNLGKSSFCQQGIVLVDETGPVLT-IPADAVVECGDD--LSPAATGELIASDGCNDLLQAPTYFDHEPIGD----CPKTILRTWTAMDVCGNSTNANQLITV 316
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BLAST of mRNA_L-elsbetiae_contig767.16603.1 vs. uniprot
Match: A0A7Y4WK14_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7Y4WK14_9BACT)

HSP 1 Score: 62.8 bits (151), Expect = 3.830e-6
Identity = 52/144 (36.11%), Postives = 70/144 (48.61%), Query Frame = 3 
Query:  486 SDNDPCFEGGVVVPTDEIEGADNCS--FTLTRIWAAEDLSSNSIQAQRTYEVADTEPPVLTGLPAEGLVVQTDDPNFSFSNDT----SVAAVDACSGLEVPVVYTESTVLGQVDDAC-LRTVARTWTAEDGCGNSVSATRTATV 896
            S  D C  G   +   +   A NC+    +TR W A D   NS        V DT PPV++  P+  +V      + S S D     S +A D CSG+   + +++S  + Q D AC  RT+ RTWTA DGCGNS S  +  TV
Sbjct:  453 SATDDC-SGVASISHSDSTAAGNCAGNHVITRTWTATDGCGNSSSCXXXXXVTDTTPPVIS-CPSGAVV------DCSASTDPVDTGSASATDDCSGV-ASISHSDS--VSQPDPACAFRTITRTWTATDGCGNSSSCVQMITV 585
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BLAST of mRNA_L-elsbetiae_contig767.16603.1 vs. uniprot
Match: A0A3A0CXH8_9BACT (HYR domain-containing protein n=2 Tax=Planctomycetes TaxID=203682 RepID=A0A3A0CXH8_9BACT)

HSP 1 Score: 60.8 bits (146), Expect = 1.160e-5
Identity = 54/158 (34.18%), Postives = 77/158 (48.73%), Query Frame = 3 
Query:  435 NVTVQ--ECIAPASN--LVIVSDNDPCFEGGVVVPTDEIEGADNCSFTLTRIWAAEDLSSNSIQAQRTYEVADTEPPVLTGLPAEGLVVQTDDPNFSFSNDTSVAAVDACSGLEVPVVYTESTVLGQVDDACLRTVARTWTAEDGCGNSVSATRTATV 896
            NVT+     + P  N  L +    D C     V  +DEI+G D+CS  + R W A D    S   Q+   +AD   PVLT +PA+ +V   DD   + +    + A DAC+ L     Y +   +G    +C +T+ RTWTA D CGN+  A +  TV
Sbjct:  184 NVTLPCGSSVIPGLNPALTVAMGVDDCDVQVNVSFSDEIQG-DSCSKLIVRTWRATDDLGKSEFCQQGIVLADETGPVLT-VPADAIVECGDD--LAPAATGELIASDACNDLLQSPTYVDHDPVG----SCPKTILRTWTAMDVCGNATHANQLITV 333
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BLAST of mRNA_L-elsbetiae_contig767.16603.1 vs. uniprot
Match: UPI0003A324B2 (T9SS type A sorting domain-containing protein n=1 Tax=Lewinella cohaerens TaxID=70995 RepID=UPI0003A324B2)

HSP 1 Score: 61.2 bits (147), Expect = 1.300e-5
Identity = 65/236 (27.54%), Postives = 99/236 (41.95%), Query Frame = 3 
Query:  210 SVIQWGDGVCDARLNTELCKFDGGDCCA-------QTCVRSLLLPDSCLYFDCVDPSVGADEPVAAFDGEVPELKNLPIQDLNVTVQECIAPASNLVIVSDNDPCFEGGVVVPTDEIEGADNCSFTLTRIWAAEDLSSNSIQAQRTYEVADTEPPVLTGLPAEGLVVQTDDPNFSFSNDTS----VAAVDACSGLEVPVVYTESTVLGQVDDACLRTVARTWTAEDGCGNSVSATR 884
            +V+  GDG  +  +  +L     GDC +       Q  V +L L D+   ++     + +  P A    E+       I +++ T   C   AS  +   D+ P           E+  A N      RIW   D+  NS    ++  + D E P+L  +P +              ND S    V A D CSGLEV VV+ E+T     +  C + + RTWTA D CGN+ +AT+
Sbjct: 1255 AVVNVGDGCGNTDVRADLQLLSTGDCLSTGYLARYQLIVTALDLCDNVSEYELFIEFIDSTPPTAIGPAELVLSCGEAIPEISAT-DGCGQVAS--ITFVDSQPI----------EVSCAGNPQ-NFERIWTITDVCDNSSIFAQSITIIDDEGPLLRNVPEDTC------------NDESIPLPVTAFDECSGLEVDVVFNETTTN---EPDCGQVLTRTWTATDACGNTSTATQ 1461
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig767.16603.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
A0A6H5KTP7_9PHAE5.890e-1233.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A842IUV8_9FLAO5.440e-832.56Gliding motility-associated C-terminal domain-cont... [more]
A0A0C5WCZ3_9FLAO7.010e-828.78Uncharacterized protein n=1 Tax=Siansivirga zeaxan... [more]
A0A1V4V1Y0_9EURY4.210e-727.20HYR domain protein n=1 Tax=Methanosaeta sp. PtaB.B... [more]
A0A6H5JVP4_9PHAE9.240e-738.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A521UQ29_9BACT1.620e-637.07HYR domain-containing protein (Fragment) n=1 Tax=S... [more]
A0A518LR27_9BACT2.890e-632.91HYR domain-containing protein n=1 Tax=Phycisphaera... [more]
A0A7Y4WK14_9BACT3.830e-636.11Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A3A0CXH8_9BACT1.160e-534.18HYR domain-containing protein n=2 Tax=Planctomycet... [more]
UPI0003A324B21.300e-527.54T9SS type A sorting domain-containing protein n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig767contigL-elsbetiae_contig767:16001..20954 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score73.2
Seed ortholog evalue3.9e-10
Seed eggNOG ortholog1168034.FH5T_20610
KEGG koko:K02396
KEGG Pathwayko02040,map02040
Hectar predicted targeting categoryother localisation
EggNOG free text desc.oxidoreductase activity
EggNOG OGsCOG2304@1,COG2304@2
COG Functional cat.IU
Best tax levelBacteria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02035
Exons7
Model size3148
Cds size1464
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816852.3571668-UTR-L-elsbetiae_contig767:16000..160411622816852.3571668-UTR-L-elsbetiae_contig767:16000..16041Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig767 16001..16041 +
1691683862.046715-UTR-L-elsbetiae_contig767:16000..160411691683862.046715-UTR-L-elsbetiae_contig767:16000..16041Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig767 16001..16041 +
1622816852.4478722-UTR-L-elsbetiae_contig767:19311..209541622816852.4478722-UTR-L-elsbetiae_contig767:19311..20954Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig767 19312..20954 +
1691683862.145443-UTR-L-elsbetiae_contig767:19311..209541691683862.145443-UTR-L-elsbetiae_contig767:19311..20954Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig767 19312..20954 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816852.3695376-CDS-L-elsbetiae_contig767:16041..161401622816852.3695376-CDS-L-elsbetiae_contig767:16041..16140Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig767 16042..16140 +
1691683862.0610237-CDS-L-elsbetiae_contig767:16041..161401691683862.0610237-CDS-L-elsbetiae_contig767:16041..16140Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig767 16042..16140 +
1622816852.3828237-CDS-L-elsbetiae_contig767:16313..165441622816852.3828237-CDS-L-elsbetiae_contig767:16313..16544Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig767 16314..16544 +
1691683862.0699687-CDS-L-elsbetiae_contig767:16313..165441691683862.0699687-CDS-L-elsbetiae_contig767:16313..16544Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig767 16314..16544 +
1622816852.3953018-CDS-L-elsbetiae_contig767:16781..169521622816852.3953018-CDS-L-elsbetiae_contig767:16781..16952Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig767 16782..16952 +
1691683862.079213-CDS-L-elsbetiae_contig767:16781..169521691683862.079213-CDS-L-elsbetiae_contig767:16781..16952Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig767 16782..16952 +
1622816852.4067295-CDS-L-elsbetiae_contig767:17165..172761622816852.4067295-CDS-L-elsbetiae_contig767:17165..17276Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig767 17166..17276 +
1691683862.095769-CDS-L-elsbetiae_contig767:17165..172761691683862.095769-CDS-L-elsbetiae_contig767:17165..17276Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig767 17166..17276 +
1622816852.4178715-CDS-L-elsbetiae_contig767:17768..178881622816852.4178715-CDS-L-elsbetiae_contig767:17768..17888Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig767 17769..17888 +
1691683862.1078348-CDS-L-elsbetiae_contig767:17768..178881691683862.1078348-CDS-L-elsbetiae_contig767:17768..17888Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig767 17769..17888 +
1622816852.427897-CDS-L-elsbetiae_contig767:18239..183901622816852.427897-CDS-L-elsbetiae_contig767:18239..18390Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig767 18240..18390 +
1691683862.1213372-CDS-L-elsbetiae_contig767:18239..183901691683862.1213372-CDS-L-elsbetiae_contig767:18239..18390Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig767 18240..18390 +
1622816852.43777-CDS-L-elsbetiae_contig767:18730..193111622816852.43777-CDS-L-elsbetiae_contig767:18730..19311Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig767 18731..19311 +
1691683862.1314692-CDS-L-elsbetiae_contig767:18730..193111691683862.1314692-CDS-L-elsbetiae_contig767:18730..19311Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig767 18731..19311 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig767.16603.1prot_L-elsbetiae_contig767.16603.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig767 16042..19311 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig767.16603.1

>prot_L-elsbetiae_contig767.16603.1 ID=prot_L-elsbetiae_contig767.16603.1|Name=mRNA_L-elsbetiae_contig767.16603.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=488bp
MQCLDPAAVQEAPAGCADIRRARALRLEDSEHGSPLANKAIRRLQEGPPT
EEDCGSSVIQWGDGVCDARLNTELCKFDGGDCCAQTCVRSLLLPDSCLYF
DCVDPSVGADEPVAAFDGEVPELKNLPIQDLNVTVQECIAPASNLVIVSD
NDPCFEGGVVVPTDEIEGADNCSFTLTRIWAAEDLSSNSIQAQRTYEVAD
TEPPVLTGLPAEGLVVQTDDPNFSFSNDTSVAAVDACSGLEVPVVYTEST
VLGQVDDACLRTVARTWTAEDGCGNSVSATRTATVEISAVDCTIGVSPAP
SLFSFAPTSTGEATFAPTSLDTIAPTSTLPALTSAPAALDTIAPTSTSAP
VALDGDTIAPSSTPAPSELDTIAPTSTSAPAALDGDTIAPSSTPAPSELD
TIAPTSTPAPSELDTIAPSSTPAPSELDTIAPASTPAPSELDTTASTTES
ETVSPTTPSPTAAEEEEGTPSPTAVDTTTPSPTTAAV*
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mRNA from alignment at L-elsbetiae_contig767:16001..20954+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig767.16603.1 ID=mRNA_L-elsbetiae_contig767.16603.1|Name=mRNA_L-elsbetiae_contig767.16603.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4954bp|location=Sequence derived from alignment at L-elsbetiae_contig767:16001..20954+ (Laminarionema elsbetiae ELsaHSoW15)
AGGACACGGAGCCGCGCGCGCAGTCTTGCGGCTCCCGTACTATGCAGTGC
CTCGACCCCGCAGCGGTGCAAGAGGCTCCGGCCGGCTGCGCAGACATCAG
GCGGGCCCGTGCGCTCCGCCTCGAAGACTCTGAACACGGGGTGAGCACCA
AGAACTGAGACTAGCAACTGGTTTGTTTTGTCGAGACGGACATCAATCGT
GGAAGAGCGACGCCGTGAACTCATGGATTGGCCGCTTCGACCCAAGAAAC
ACTCACGCTTTCTATGCCCCGACCCCATCGCAAACTGCAAACATCGTGGC
ATGCCTTGTACAGTCGCCCCTGGCGAACAAAGCTATCCGGCGCCTGCAAG
AAGGCCCCCCCACGGAAGAAGACTGCGGCTCGTCCGTGATACAGTGGGGC
GACGGAGTTTGCGATGCTCGGCTTAACACTGAGCTCTGCAAATTCGATGG
CGGCGATTGCTGTGCTCAGACCTGCGTGCGAAGCCTCCTTCTACCCGACT
CCTGCCTGTACTTCGATTGCGTGGACCCGAGCGTTGGCGCTGATGTGAGT
GATGCCCCGTAACGCGTTCGACAAGGTGCGGCGAGTCTTGAACTGATTGT
CTCTCGGAGCAACATTTTCTTGCGCGATTTCGAGTCGGATGTACGTTTTT
AGCATGAAACGGCGTTTCTCTTGGCCAAGAAGCATCACCAAGCATACTCA
ACTGCTCCTTATTTTGATGGTCCTCCGTATGCCTGCCCCATTTCCCGGCC
ATGCTGCTCCCGCACCGTTTGGACACAACAGGAACCCGTGGCCGCTTTCG
ACGGCGAGGTCCCGGAACTGAAGAACCTGCCCATCCAAGACCTGAACGTT
ACCGTGCAGGAGTGTATCGCGCCGGCGTCGAACCTGGTCATCGTTTCTGA
CAACGACCCTTGCTTCGAAGGCGGTGTCGTGGTCCCGACCGACGAGATCG
AGGTAAGTGTCTCGAACATGAACCTAATGCATTTTACGTCACTCCTCGCG
ACAGGCAGCAGCCAGGTTTCACGAACTATCAGTCACCGCGGATCGTCTTT
CTCACCACAACCAACGGCCAGTGTGTTTTATGTCAAGCATTGCGTGCTTC
AAACGATGACCAACTGATAATTTGCCCCCCTCCTTTTGCCTCGCCTGTCT
GTGCGACATCCAAAGGGAGCCGACAACTGCTCGTTCACGCTGACACGCAT
TTGGGCGGCGGAGGACCTCAGCTCCAACTCCATCCAAGCTCAAAGGACGT
ACGAAGTCGCGGACACCGAACCGCCGGTAAGGATGCGGTTTTGCGAACCA
TGAGAGTGTCTACATGTAGATGAAGTGCACAGACATGCATACCGAACACT
GCCACCACCGCCCATTGCTCAGAAATGGGGGTTGTTGTGTTCTCGCTATA
TAACTTTCAGAAGTACGATCCTCACAAAACGTGCGAAGCGCTTCTGCATT
TGGAGACTGAGGTCAATCTCCACGGGGAAGCACAACAGTAGCAGTAGAGG
CTTGAGTTGTGTCTCTAACCGCAACTGCAAGTCGGGTAGCGAAACAAATA
TGCACGCCACACCTGAAGACAACCACGCCCGCGTCAAATATGGCGCCATA
TGACTTGAGAAACACGCTAAGCGCGAAATAATTCCAATGTGCCTGGTATT
CAGGGCAATATCGTGAAGACAACCTCACCATTCTGCTGACCATACAGCAA
GCAAGAGCCTTTTTTTTCTGACGCGATGAGCGCGCTCCTGCTGCTGGGTG
CTTTGTTTGGTCCCATAGGTTCTTACCGGTCTACCGGCCGAGGGCTTGGT
GGTTCAAACCGACGATCCCAACTTTTCGTTCAGCAACGACACATCGGTGG
CGGCTGTTGACGCGTGCAGTGGTCTGGAAGTTCCGGTGGTGAGTGTGAGA
TGTGCTATTGCGCGTAGTTCCACCGCACTATGTCGTCTCCGCCACCTACT
TGAGAAACAAAGTTGCTCACAGTTTATCATGTCTGTTTCCGCAGAAAGTG
AGGATGATGACCGCGCTTGCTCGCAAAGATGCAGCAGGACCTGCCAAACA
GACCGGTGTTGCGGGTTGCATCACTATCACCGAAGACTAATGCGGATAAT
TTTGTTGGAAAATTGCGGTCAGAACGAGCGCGATTGTCCCTCGCGTAAAC
GTTCCGTTCAATTCCAGGAAAATACAGGGAGGAAACGCAGGAAGACAAGG
CTTTCTAATCGTTTGCCGAATCATTTTGCGTTTCGTCAGGTATACACGGA
GAGCACGGTCCTTGGTCAGGTGGATGACGCGTGCCTCCGCACAGTTGCCC
GCACATGGACCGCAGAAGACGGGTGCGGAAACTCGGTCAGCGCGACGCGG
ACGGCTACGGTGGAGATCTCGGCAGTCGATTGCACCATCGGTGAGGATGA
GACCACCCTGACCGAAGGGCAGCGAAGTAGAAGCGGCGTGTGCTGTGTTT
CTCACTGCCCCGAATGGCACACGCAACAACACCCGAAACGAGACCACGAA
TCGCCTTGAAAAGCCTTAAGTGGCGTTGGTCGACGTCGGCCATGATGATC
GTTGCTCGTGTCGGTGTGCGTGCGAGTTACGTTCTTGGCATAGCGCATCG
GATGGTTTCCCATTTTATTGCGGAAGTTATACATGACATTGCGCAAAACG
GAGACACCCTATTATTCTACACTCATCGTTTCCCTACGTATACCTAACAT
CCTCGTACTGTGCTTTATTTCTCGCCTCAGGTGTATCTCCAGCCCCCTCT
TTGTTCTCCTTCGCCCCGACGTCGACGGGTGAAGCAACGTTTGCGCCAAC
GTCTCTGGACACGATCGCGCCAACCTCAACGTTGCCAGCTTTGACATCGG
CCCCGGCTGCGCTAGACACGATCGCGCCAACCTCGACATCGGCCCCAGTT
GCATTGGACGGGGACACGATCGCGCCATCCTCGACACCGGCCCCATCTGA
GCTGGACACGATCGCGCCAACCTCGACATCGGCCCCAGCTGCACTGGACG
GGGACACGATCGCGCCATCCTCGACACCGGCCCCGTCTGAGCTGGACACG
ATCGCGCCAACCTCGACACCGGCCCCGTCTGAGCTGGACACGATCGCGCC
ATCCTCGACACCGGCCCCGTCTGAGCTGGACACGATCGCGCCAGCCTCGA
CGCCGGCCCCGTCTGAGCTGGACACGACCGCCTCCACGACCGAGAGCGAG
ACGGTCTCTCCCACGACACCCTCGCCTACCGCGGCGGAGGAAGAAGAAGG
GACGCCCTCGCCTACCGCAGTGGACACAACGACTCCTTCCCCTACCACGG
CGGCGGTGTAAGCTTGCGGCGCCATCGAAGACTGGATTCATCCATCCCTG
AACAAGAAATATAAAGTAGAGTACTTCAAGTGATAAGATGTCTTGCTAGA
ACCCTCCCGTGCAAATTATGCCGCTGGCAGGTTGCCTGTTGCTGGCGTGT
ACGGCTGGGTATCGTTGTGGGTGTGGGGAGGAATGGGTGATCCTGTCCAG
CGACGGACGCCGTGGCTTTGCGTGCTTTTGTCATATTCCCCCAAGTATAT
ATCTGTGCGCGTGAAGTGGGCAGGAACTGATGTCGGCGCGACGTGTTGTT
TCAATTCCTACCACGGTATTGTGGAGGCGTGCGCATTTTTACCCAAGTCA
AAGTCTTGCATGGGGAAGTATATCGTGGTTAGCCGGGAAGTTTTCAGAAA
AAGGCGAGATGTAATTGTAGTTTGTAATCAGGCACGTTTCATAGCCGAGA
AGTTGGCGGCCGTGCAGTATTTTCATCGGGTTGAGGCGGGGCAGGAAGTT
CCCATCAGAGCACCGCTAGTTAACCGAGCGCTCAAGAGCGTCGAAAAGGC
CCACGTAGCAGTTGGTACCAGGTTGAGGGTGCGATTGCTGGTGTCATTGG
GGACGGTGCTTATCTGTTAGTGGTCAAGCCTTAGTGCCATCGTGGGGGTC
CCGGGGGGCGCGTACTGTGGTTTGTGTCTGGCGCTCACCTGTTTCCTGGT
AGCGCCATCAGATGAGATGATTTGATTGCCCCGTCTGCAACGGCAGTAAT
GCACCCGGCGCATTTTCTGCAACGCCGTGACGCGACGTTTTGTGGCGCGG
ACGGAGTAAACACGTGTGTGTGTCGAGGTCATATTCACGGAGGGCACAAG
GATGACCAGACCGAACGTGGGTACGGGACGTGTAGCAAGTAGTCCACGTT
CTCGGGTAGGCGCCGGCGGTGGGGCCGTGGCGCTTTTGGTTTGGTGGAAC
TAATGCCGCGTCACATCGCATCACCTGGAAGTGCACCTCTTTGCTCGCAC
CGTAGGAAAAGAGATAGTAGGGACATGGCAGATTAGAAGGATTCAAGGAG
GCCCTGAAGGCCCTACGCCAAACCGTATTGAAAGCGGGAGGTGACCCGAA
GCATGCTGGTCTACTTCTCTCAGAATAGGAGCAGCCGCCTCAGTGGCTGC
AGGGGGAGATATCTGACAGGGTAGTAAATAATCCAGAGAGAGGGTAGATG
AAAAGATGGTTCGGTCACCTCTGTATTTATGCATACAGGATATATACTAT
TGTAGGAATAATTTTGCGATTTCGGGATTGGTGCCCCGTAACGAAGCAAA
TGAGAACGGAGTATGTATTTAGGCAAGAGCAAATGGAGGCTTAGCCTCGA
GGTTGGTGGGTGTCAATGGTTTGTGACTATTGTTGCAAGGCACACTCACT
AGCTGCATGCGGCGTTCGGTTCTCGAAAGGTTTTTATTATTATTATTTCG
TTTGCCATCCGACAAATGCAGATTCCTTCAATATACACACACAACATACC
CGTACTTGTACCAACACGCGAAAGAAAACGCCTTGTAACCTGACATGTAA
CATCAACATTCTTTTTATTCGTTTTTGAAGGGAGGCTGTGGGCCAGTGTT
CTGTTTCTATCCTGGCCACAGCAATAGTGATGCCTCCCTCGGTAGTGTTA
GCGC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig767:16001..20954+

>mRNA_L-elsbetiae_contig767.16603.1 ID=mRNA_L-elsbetiae_contig767.16603.1|Name=mRNA_L-elsbetiae_contig767.16603.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2928bp|location=Sequence derived from alignment at L-elsbetiae_contig767:16001..20954+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCAGTGCCTCGACCCCGCAGCGGTGCAAGAGGCTCCGGCCGGCTGCGC
AGACATCAGGCGGGCCCGTGCGCTCCGCCTCGAAGACTCTGAACACGGGA
TGCAGTGCCTCGACCCCGCAGCGGTGCAAGAGGCTCCGGCCGGCTGCGCA
GACATCAGGCGGGCCCGTGCGCTCCGCCTCGAAGACTCTGAACACGGGTC
GCCCCTGGCGAACAAAGCTATCCGGCGCCTGCAAGAAGGCCCCCCCACGG
AAGAAGACTGCGGCTCGTCCGTGATACAGTGGGGCGACGGAGTTTGCGAT
GCTCGGCTTAACACTGAGCTCTGCAAATTCGATGGCGGCGATTGCTGTGC
TCAGACCTGCGTGCGAAGCCTCCTTCTACCCGACTCCTGCCTGTACTTCG
ATTGCGTGGACCCGAGCGTTGGCGCTGATTCGCCCCTGGCGAACAAAGCT
ATCCGGCGCCTGCAAGAAGGCCCCCCCACGGAAGAAGACTGCGGCTCGTC
CGTGATACAGTGGGGCGACGGAGTTTGCGATGCTCGGCTTAACACTGAGC
TCTGCAAATTCGATGGCGGCGATTGCTGTGCTCAGACCTGCGTGCGAAGC
CTCCTTCTACCCGACTCCTGCCTGTACTTCGATTGCGTGGACCCGAGCGT
TGGCGCTGATGAACCCGTGGCCGCTTTCGACGGCGAGGTCCCGGAACTGA
AGAACCTGCCCATCCAAGACCTGAACGTTACCGTGCAGGAGTGTATCGCG
CCGGCGTCGAACCTGGTCATCGTTTCTGACAACGACCCTTGCTTCGAAGG
CGGTGTCGTGGTCCCGACCGACGAGATCGAGGAACCCGTGGCCGCTTTCG
ACGGCGAGGTCCCGGAACTGAAGAACCTGCCCATCCAAGACCTGAACGTT
ACCGTGCAGGAGTGTATCGCGCCGGCGTCGAACCTGGTCATCGTTTCTGA
CAACGACCCTTGCTTCGAAGGCGGTGTCGTGGTCCCGACCGACGAGATCG
AGGGAGCCGACAACTGCTCGTTCACGCTGACACGCATTTGGGCGGCGGAG
GACCTCAGCTCCAACTCCATCCAAGCTCAAAGGACGTACGAAGTCGCGGA
CACCGAACCGCCGGGAGCCGACAACTGCTCGTTCACGCTGACACGCATTT
GGGCGGCGGAGGACCTCAGCTCCAACTCCATCCAAGCTCAAAGGACGTAC
GAAGTCGCGGACACCGAACCGCCGGTTCTTACCGGTCTACCGGCCGAGGG
CTTGGTGGTTCAAACCGACGATCCCAACTTTTCGTTCAGCAACGACACAT
CGGTGGCGGCTGTTGACGCGTGCAGTGGTCTGGAAGTTCCGGTGGTTCTT
ACCGGTCTACCGGCCGAGGGCTTGGTGGTTCAAACCGACGATCCCAACTT
TTCGTTCAGCAACGACACATCGGTGGCGGCTGTTGACGCGTGCAGTGGTC
TGGAAGTTCCGGTGGTATACACGGAGAGCACGGTCCTTGGTCAGGTGGAT
GACGCGTGCCTCCGCACAGTTGCCCGCACATGGACCGCAGAAGACGGGTG
CGGAAACTCGGTCAGCGCGACGCGGACGGCTACGGTGGAGATCTCGGCAG
TCGATTGCACCATCGGTATACACGGAGAGCACGGTCCTTGGTCAGGTGGA
TGACGCGTGCCTCCGCACAGTTGCCCGCACATGGACCGCAGAAGACGGGT
GCGGAAACTCGGTCAGCGCGACGCGGACGGCTACGGTGGAGATCTCGGCA
GTCGATTGCACCATCGGTGTATCTCCAGCCCCCTCTTTGTTCTCCTTCGC
CCCGACGTCGACGGGTGAAGCAACGTTTGCGCCAACGTCTCTGGACACGA
TCGCGCCAACCTCAACGTTGCCAGCTTTGACATCGGCCCCGGCTGCGCTA
GACACGATCGCGCCAACCTCGACATCGGCCCCAGTTGCATTGGACGGGGA
CACGATCGCGCCATCCTCGACACCGGCCCCATCTGAGCTGGACACGATCG
CGCCAACCTCGACATCGGCCCCAGCTGCACTGGACGGGGACACGATCGCG
CCATCCTCGACACCGGCCCCGTCTGAGCTGGACACGATCGCGCCAACCTC
GACACCGGCCCCGTCTGAGCTGGACACGATCGCGCCATCCTCGACACCGG
CCCCGTCTGAGCTGGACACGATCGCGCCAGCCTCGACGCCGGCCCCGTCT
GAGCTGGACACGACCGCCTCCACGACCGAGAGCGAGACGGTCTCTCCCAC
GACACCCTCGCCTACCGCGGCGGAGGAAGAAGAAGGGACGCCCTCGCCTA
CCGCAGTGGACACAACGACTCCTTCCCCTACCACGGCGGCGGTGTAAGTG
TATCTCCAGCCCCCTCTTTGTTCTCCTTCGCCCCGACGTCGACGGGTGAA
GCAACGTTTGCGCCAACGTCTCTGGACACGATCGCGCCAACCTCAACGTT
GCCAGCTTTGACATCGGCCCCGGCTGCGCTAGACACGATCGCGCCAACCT
CGACATCGGCCCCAGTTGCATTGGACGGGGACACGATCGCGCCATCCTCG
ACACCGGCCCCATCTGAGCTGGACACGATCGCGCCAACCTCGACATCGGC
CCCAGCTGCACTGGACGGGGACACGATCGCGCCATCCTCGACACCGGCCC
CGTCTGAGCTGGACACGATCGCGCCAACCTCGACACCGGCCCCGTCTGAG
CTGGACACGATCGCGCCATCCTCGACACCGGCCCCGTCTGAGCTGGACAC
GATCGCGCCAGCCTCGACGCCGGCCCCGTCTGAGCTGGACACGACCGCCT
CCACGACCGAGAGCGAGACGGTCTCTCCCACGACACCCTCGCCTACCGCG
GCGGAGGAAGAAGAAGGGACGCCCTCGCCTACCGCAGTGGACACAACGAC
TCCTTCCCCTACCACGGCGGCGGTGTAA
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