mRNA_L-elsbetiae_contig7645.16572.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig7645.16572.1
Unique NamemRNA_L-elsbetiae_contig7645.16572.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig7645.16572.1 vs. uniprot
Match: D8LFS9_ECTSI (SET domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFS9_ECTSI)

HSP 1 Score: 411 bits (1056), Expect = 4.680e-139
Identity = 219/339 (64.60%), Postives = 243/339 (71.68%), Query Frame = 1
Query:    1 DDELQLLRGTSLHAVTARWKAQVDSDFGELEGLQLPSP--PEDSCLTARDALGGFLTKEGYLWALGTVWSRFVTVEQGGRALKAMAPVFDMFNHDPLSSTVHGFQESNQARPLLCCLHLVTLQDWAAGSEVKFSYGPLPNSRLLLLHGFCLPDNAFEAVDLLAMMEPGAPNYAAKNKILEKNGVKSSTRPFVLTSKGLDPSLLPALRVQRATESELKIAADQPWGESLGARNEAEVCEVLIAALSQMLKDREAPPPSPASRGGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQRGVLPEDRRRAIELLREGEASVLRSCLAWIE 1011
            DDEL+LLRGTSLHAVT +WKAQVD+DF ELE L LPSP   E    TARDAL GFLTKE YLWALGTVWSRFVTVE+ GR LKAMAPVFDMFNH PLSSTVHG+QESN       CLHLVTLQDWA+GSEVKFSYGPLPNSRLLLLHGFCLPDN FE+V+L AMMEPGAP +A KNKI+  NGV  S RPF LTSKGLDP LLPALRVQRATE+ELK+AA+ PWGE+LGARNEA V +VL  AL+ MLK+RE P  + AS  GP                                          A+R ++PEDR  A ELLR+GE  VL+ CL W+E
Sbjct:  122 DDELELLRGTSLHAVTVQWKAQVDTDFRELEALPLPSPRSEEGGSSTARDALEGFLTKEEYLWALGTVWSRFVTVERAGRGLKAMAPVFDMFNHGPLSSTVHGYQESND------CLHLVTLQDWASGSEVKFSYGPLPNSRLLLLHGFCLPDNPFESVELWAMMEPGAPGFAEKNKIMLDNGVDPSKRPFFLTSKGLDPLLLPALRVQRATETELKVAAETPWGETLGARNEAAVVDVLWNALAGMLKEREGPSTAHASCNGPVSGEAQASRTPPDPNNDTGGEGGEEDGG--------------AERTIVPEDRSAAAELLRKGEQRVLQKCLDWVE 440          
BLAST of mRNA_L-elsbetiae_contig7645.16572.1 vs. uniprot
Match: A0A8K1C412_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C412_PYTOL)

HSP 1 Score: 140 bits (353), Expect = 3.230e-34
Identity = 88/270 (32.59%), Postives = 139/270 (51.48%), Query Frame = 1
Query:    1 DDELQLLRGTSLHAVTARWKAQVDSDFGELEGLQLPSPPEDSCLTAR-----DALGGFLTKEGYLWALGTVWSRFVTVEQGGRAL-KAMAPVFDMFNHDPLSSTVHGFQESNQARPLLCCLHLVTLQDWAAGSEVKFSYGPLPNSRLLLLHGFCLPDNAFEAVDLLAMMEPGAPN-YAAKNKILEKNGVKSSTRPFVLTSKGLDPSLLPALRVQ----RATESELKIAADQPWGESLGARNEAEVCEVLIAALSQMLKDREAPPPSPASR 777
            D E+++L+G+++  +  + K  VD+ F  L+   L +   D+ +T       + +    + E Y WAL T+WSRFV+++       KAMAPVFDM NHDP +   H F    Q         L + Q W+AGS++  +YG L N +LL L+GF LP+N F+AV++   M+P + + +  K K+LE+  V     PF LT   LD  LL  +R+Q     ++E+  + A     G+S    NE      L+  + Q ++    P   P S+
Sbjct:  143 DKEVEMLQGSTVCYIAQQMKTNVDAGFARLKQT-LFADIADAVVTHHPERSIEQVEACFSLENYKWALSTIWSRFVSLQIASATFRKAMAPVFDMLNHDPDAEMSHHFDTETQT------FQLTSYQHWSAGSQLCINYGALSNHKLLTLYGFVLPENPFDAVEMWLPMDPSSTSEFETKVKLLEEIDVDHEVTPFELTVDELDELLLIVMRIQVLECESSETFQESAQRITNGDSANTENELTALSRLVVIMQQTIQSYAVPSDDPTSK 405          
BLAST of mRNA_L-elsbetiae_contig7645.16572.1 vs. uniprot
Match: A0A4D9D5E0_9STRA (SET domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D5E0_9STRA)

HSP 1 Score: 135 bits (340), Expect = 2.130e-32
Identity = 100/265 (37.74%), Postives = 141/265 (53.21%), Query Frame = 1
Query:    1 DDELQLLRGTSLHAVTARWKAQVDSDFGELEG--LQLPSPPEDSCLTARDALGGFLTKEGYLWALGTVWSRFVTVEQG-GRAL-KAMAPVFDMFNH---DPLSSTVHGFQESN----------QARPLLCCLHLVTLQDWAAGSEVKFSYGPLPNSRLLLLHGFCLPDNAFEAVDLLAMMEPGAPNYAAKNKILEKNGVKSSTRPFVLTSKG--LDPSLLPALRVQRATES-ELKIAADQPWGESLGARNEAEVCEVLIAALSQM 735
            +D +  L+G+SL A+  + + QV SDF EL    +Q+   P   C         + + E Y WAL  + SRF++V  G G  L KAMAP FD+FNH   DP   T HGF +            +A      L ++  Q   AG E+  +YGPL N RLL L+GF LPDN ++++D+   ME  AP+YA K + + + G++    PF+LT K   + PSLL A+R+QRA +S +LK       G  L   NE E  + L  AL+ M
Sbjct:  112 NDAVSQLQGSSLFAIVRQLQQQVLSDFTELSASPIQIGGTPLSKC--------DWWSVENYEWALTQIHSRFISVPTGRGTELRKAMAPYFDLFNHSCQDPPMVT-HGFVKDRPDGQNARGKGRASDEAGALVILAQQALVAGDEIFLNYGPLGNLRLLQLYGFALPDNPYDSLDVWVTMELEAPHYATKQEAMARLGLRP---PFLLTKKAPVVSPSLLAAVRIQRARDSADLKCLESASKG-PLSPCNEKETLDALYMALTAM 363          
BLAST of mRNA_L-elsbetiae_contig7645.16572.1 vs. uniprot
Match: A0A0W8CD61_PHYNI (Ribosomal N-lysine methyltransferase set10 n=9 Tax=Phytophthora TaxID=4783 RepID=A0A0W8CD61_PHYNI)

HSP 1 Score: 129 bits (324), Expect = 4.260e-30
Identity = 90/268 (33.58%), Postives = 135/268 (50.37%), Query Frame = 1
Query:    4 DELQLLRGTSLHAVTARWKAQVDSDFGELEGLQLPSPPEDSC--LTARDALGGFLTKEGYLWALGTVWSRFVT---------------VEQGGRALKAMAPVFDMFNHDPLSSTVHGFQESNQARPLLCCLHLVTLQDWAAGSEVKFSYGPLPNSRLLLLHGFCLPDNAFEAVDL-LAMMEPGAPNYAAKNKILEKNGVKSSTRPFVLTSKGLDPSLLPALRVQRA---TESELKIAADQPW-GESLGARNEAEVCEVLIAALSQMLK 741
            +E++ L G++L  +  + + +V +D+  L+   L    E+    +T  D    F + + Y WAL T+WSRFV+               V    ++ KAM PVFDM NHDP +   H F    Q         LV+ Q W AG+++  +YGPL N +LLLL+GF +  N F+AV++ L M E     Y  K + L  NG+  +T PF L ++  +  LL A R+Q     T  E +I A++   GE +   NE E    LI  L +ML+
Sbjct:  138 EEIKALEGSNLFFIAQQMEKKVAADYTSLKETVLLELFENITEGITV-DLFDDFFSLDNYKWALSTIWSRFVSLRLDEAPSSKDSSSSVPVAKQSFKAMVPVFDMLNHDPEAEMSHFFDMDTQL------FKLVSHQHWNAGTQMFINYGPLSNHKLLLLYGFVIIGNPFDAVEMWLPMDEASTKFYLEKEQFLLINGLDHATNPFELVAEETNDLLLMATRIQEIDCETVEEFEILANKALDGEMVSLENEQEALTRLIYTLEKMLE 398          
BLAST of mRNA_L-elsbetiae_contig7645.16572.1 vs. uniprot
Match: W2KAV5_PHYPR (Uncharacterized protein n=1 Tax=Phytophthora parasitica TaxID=4792 RepID=W2KAV5_PHYPR)

HSP 1 Score: 128 bits (321), Expect = 1.120e-29
Identity = 89/268 (33.21%), Postives = 135/268 (50.37%), Query Frame = 1
Query:    4 DELQLLRGTSLHAVTARWKAQVDSDFGELEGLQLPSPPEDSC--LTARDALGGFLTKEGYLWALGTVWSRFVT---------------VEQGGRALKAMAPVFDMFNHDPLSSTVHGFQESNQARPLLCCLHLVTLQDWAAGSEVKFSYGPLPNSRLLLLHGFCLPDNAFEAVDL-LAMMEPGAPNYAAKNKILEKNGVKSSTRPFVLTSKGLDPSLLPALRVQRA---TESELKIAADQPW-GESLGARNEAEVCEVLIAALSQMLK 741
            +E++ L G++L  +  + + +V +D+  L+   L    E+    +T  D    F + + Y WAL T+WSRFV+               V    ++ KAM PVFDM NHDP +   H F    Q         LV+ Q W AG+++  +YGPL N +LLLL+GF +  N F+AV++ L M E     Y  K + L  NG+  +T P+ L ++  +  LL A R+Q     T  E +I A++   GE +   NE E    LI  L +ML+
Sbjct:  138 EEIKALEGSNLFFIAQQMEKKVAADYTSLKETVLLELFENITEGITV-DLFDDFFSLDNYKWALSTIWSRFVSLRLDEAPSSKDSSSSVPVAKQSFKAMVPVFDMLNHDPEAEMSHFFDMDTQL------FKLVSHQHWNAGTQMFINYGPLSNHKLLLLYGFVIIGNPFDAVEMWLPMDEASTKFYLEKEQFLLINGLDHATNPYELVAEETNDLLLMATRIQEIDCETVEEFEILANKALVGEMVSLENEQEALTRLIYTLEKMLE 398          
BLAST of mRNA_L-elsbetiae_contig7645.16572.1 vs. uniprot
Match: A0A168CTA7_CORDF (MYND-type zinc finger protein samB n=1 Tax=Akanthomyces lecanii RCEF 1005 TaxID=1081108 RepID=A0A168CTA7_CORDF)

HSP 1 Score: 124 bits (311), Expect = 2.640e-28
Identity = 81/251 (32.27%), Postives = 127/251 (50.60%), Query Frame = 1
Query:    1 DDELQLLRGTSLHAVTARWKAQVDSDFGELEGLQLPSPPEDSCLTARDALGGFLTKEGYLWALGTVWSRFVTVE-QGGRALKAMAPVFDMFNHDPLSSTVHGFQESNQARPLLCCLHLVTLQDWAAGSEVKFSYGPLPNSRLLLLHGFCLPDNAFEAVDLLAMMEPGAPNYAAKNKILEKNGVKSSTRPFVLTSKGLDPSLLPALRVQRATESELKIAADQPWGESLGA---RNEAEVCEVLIAALSQMLK 741
            D+EL +  G+SLH++T + +  V  D+ +L    L        L   D  G     + Y WALGTVWSR +     GG +L+ +AP  DM NH       H +       P    L ++  +D++ G +V   YGP+PNSRLL L+GF LPDN  ++ DL+    P AP Y  K ++ +  G++++    + +S  L   +L  LR+QR  +SEL   A Q    + G     NE ++ + L  ++  +L+
Sbjct:  113 DEELDVCAGSSLHSLTTQLRGHVGDDYKQLLMRVLM---RHRSLFPLDKFG----IQDYKWALGTVWSRGMDFALPGGTSLRLLAPFADMLNHSSNVKQCHAYD------PATGDLSILASRDYSVGDQVFIYYGPVPNSRLLRLYGFVLPDNPHDSYDLVLQTSPMAPLYEQKERLWKLAGLETACTIPLTSSDPLPDKVLQYLRIQRLDDSELSAMATQIATGAHGKVSDENETQILQFLAESIKAILE 350          
BLAST of mRNA_L-elsbetiae_contig7645.16572.1 vs. uniprot
Match: E9E3I7_METAQ (MYND-type zinc finger protein samB n=1 Tax=Metarhizium acridum (strain CQMa 102) TaxID=655827 RepID=E9E3I7_METAQ)

HSP 1 Score: 122 bits (307), Expect = 1.010e-27
Identity = 79/252 (31.35%), Postives = 127/252 (50.40%), Query Frame = 1
Query:    1 DDELQLLRGTSLHAVTARWKAQVDSDFGELEGLQLPSPPEDSCLTARDALGGFLTKEGYLWALGTVWSRFVTVE-QGGRALKAMAPVFDMFNHDPLSSTVHGFQESNQARPLLCCLHLVTLQDWAAGSEVKFSYGPLPNSRLLLLHGFCLPDNAFEAVDLLAMMEPGAPNYAAKNKILEKNGVKSSTRPFVLTSKGLDPSLLPALRVQRATESELKIAADQPWG-----ESLGARNEAEVCEVLIAALSQML 738
            +DEL++  GTSL+ +T + K +++ D+ +L    L   P+   L          T   Y WAL TVWSR +  E   G +++ +AP  DM NH   S   H +  S         L ++  +D+ AG +V   YG +PNSRLL L+GF +PDN  ++ DL+    P AP +  K K+    G+ ++    +  +  L  S+L  LR+QR  ES+L +   Q        E +   NE +V + L+ +++ +L
Sbjct:  113 EDELEVCAGTSLYTITKQLKQRIEDDYKDLIARVLGPRPDLFPLNK-------FTIHHYKWALCTVWSRAMDFELYDGSSMRLLAPFADMLNHSSESKQCHVYDASTGN------LSILAGKDYEAGDQVYIHYGSIPNSRLLRLYGFVIPDNPNDSYDLVLATHPMAPFFEQKQKLWALAGLDATCTISLTLANPLPKSVLCYLRIQRLDESDLAVINLQQSNTDTAFEKISNSNEVQVLQFLVESITSLL 351          
BLAST of mRNA_L-elsbetiae_contig7645.16572.1 vs. uniprot
Match: G9MTS9_HYPVG (MYND-type zinc finger protein samB n=1 Tax=Hypocrea virens (strain Gv29-8 / FGSC 10586) TaxID=413071 RepID=G9MTS9_HYPVG)

HSP 1 Score: 120 bits (302), Expect = 4.570e-27
Identity = 83/254 (32.68%), Postives = 125/254 (49.21%), Query Frame = 1
Query:    1 DDELQLLRGTSLHAVTARWKAQVDSDFGELE----GLQLPSPPEDSCLTARDALGGFLTKE-GYLWALGTVWSRFVT-VEQGGRALKAMAPVFDMFNHDPLSSTVHGFQESNQARPLLCCLHLVTLQDWAAGSEVKFSYGPLPNSRLLLLHGFCLPDNAFEAVDLLAMMEPGAPNYAAKNKILEKNGVKSSTRPFVLTSKGLDPSLLPALRVQRATESELKIAADQP--WGESLGARNEAEVCEVLIAALSQML 738
            DDEL++  G+SL+ +T + + +++ D+  L     GL L   P          L  F  +  GY WAL TVWSR +  V   G  L+ +AP  DM NH P     H +  S+        L ++  +D+ A  +V   YGP+PNSRLL L+GF +PDN  ++ DL+    P AP Y  K K+    G+ S+    +     L  ++L  LR+QR  ES+L   A Q     E +    E E+   L+ ++  +L
Sbjct:  112 DDELEVCAGSSLYTITRQLEQRIEEDYRGLVVRVFGLHLDLFP----------LNKFTIENVGYKWALCTVWSRAMDFVLPNGNPLRLLAPFADMVNHSPEVKQCHVYDASSGN------LSILAGKDYEAEDQVFIYYGPMPNSRLLRLYGFVIPDNPNDSYDLVLSTHPLAPFYEQKQKLWASAGLNSTCTISLTLDDPLPKNVLRYLRIQRLDESDLAAIALQKIDTNEKISDSKEVEILRFLVESIGSLL 349          
BLAST of mRNA_L-elsbetiae_contig7645.16572.1 vs. uniprot
Match: A0A175W489_9PEZI (MYND-type zinc finger protein samB n=1 Tax=Madurella mycetomatis TaxID=100816 RepID=A0A175W489_9PEZI)

HSP 1 Score: 116 bits (291), Expect = 1.660e-25
Identity = 81/250 (32.40%), Postives = 129/250 (51.60%), Query Frame = 1
Query:    1 DDELQLLRGTSLHAVTARWKAQVDSDFGELEGLQLPSPPEDSCLTARDALGGFLTKEGYLWALGTVWSRFVT-VEQGGRALKAMAPVFDMFNHDPLSSTVHGFQESNQARPLLCCLHLVTLQDWAAGSEVKFSYGPLPNSRLLLLHGFCLPDNAFEAVDLLAMMEPGAPNYAAKNKILEKNGVKSSTRPFVLTSKGLDPSLLPALRVQRATESELKIAADQPWG---ESLGARNEAEVCEVLIAALSQML 738
            +DEL++  GTSL+ +T +   ++  D+  L  +++    +D  L   D      T E Y WAL TVWSR +  V   G + + +AP  DM NH       H +  S+        L ++  +D+ AG +V   YGP+PNSRLL L+GF +PDN  ++ DL+    P AP +  K+K+    G+ S++   +  +  L  ++L  LR+QR+ ES+L   A +      E +   NE EV  VL+ +   +L
Sbjct:  113 EDELEVCAGTSLYTITKQLDRRIKDDYRALV-VRVLGQYQD--LFPIDKF----TIEDYKWALCTVWSRAMDFVLPDGNSTRLLAPFADMLNHSSEVKQCHVYDVSSGN------LSVLAGKDYEAGDQVFIYYGPIPNSRLLRLYGFVVPDNPNDSYDLVLATHPNAPLFEQKHKLWVSAGLDSTSTISLTLTDPLPKNVLRYLRIQRSDESDLAAIALRQIDAIDEKISDSNEVEVLRVLVESFCGLL 349          
BLAST of mRNA_L-elsbetiae_contig7645.16572.1 vs. uniprot
Match: A0A2D4BRN4_PYTIN (SET domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BRN4_PYTIN)

HSP 1 Score: 109 bits (272), Expect = 7.450e-23
Identity = 59/149 (39.60%), Postives = 82/149 (55.03%), Query Frame = 1
Query:  175 YLWALGTVWSRFVTVE-QGGRALKAMAPVFDMFNHDPLSSTVHGFQESNQARPLLCCLHLVTLQDWAAGSEVKFSYGPLPNSRLLLLHGFCLPDNAFEAVDLLAMMEPGAPNYAAKNKILEKNGVKSSTRPFVLTSKGLDPSLLPALRV 618
            Y WAL T+WSRFV+VE      +KAM PVFDM NHDPL+   HGF  S QA        LV  Q W+AG+++  +YGPL N +LL L+GF +PDN  +AV++         +   +   L   G+ S    F +    ++  L+ A R+
Sbjct:  235 YQWALSTIWSRFVSVELSDAPTVKAMVPVFDMLNHDPLAQVAHGFNASTQA------FELVAHQHWSAGAQLFINYGPLSNHKLLALYGFVVPDNPHDAVEVWLPPAAATTHIDKRLLALRSLGIDSENSAFEVMFGQINELLVIATRL 377          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7645.16572.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFS9_ECTSI4.680e-13964.60SET domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A8K1C412_PYTOL3.230e-3432.59Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A4D9D5E0_9STRA2.130e-3237.74SET domain-containing protein n=1 Tax=Nannochlorop... [more]
A0A0W8CD61_PHYNI4.260e-3033.58Ribosomal N-lysine methyltransferase set10 n=9 Tax... [more]
W2KAV5_PHYPR1.120e-2933.21Uncharacterized protein n=1 Tax=Phytophthora paras... [more]
A0A168CTA7_CORDF2.640e-2832.27MYND-type zinc finger protein samB n=1 Tax=Akantho... [more]
E9E3I7_METAQ1.010e-2731.35MYND-type zinc finger protein samB n=1 Tax=Metarhi... [more]
G9MTS9_HYPVG4.570e-2732.68MYND-type zinc finger protein samB n=1 Tax=Hypocre... [more]
A0A175W489_9PEZI1.660e-2532.40MYND-type zinc finger protein samB n=1 Tax=Madurel... [more]
A0A2D4BRN4_PYTIN7.450e-2339.60SET domain-containing protein n=1 Tax=Pythium insi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7645contigL-elsbetiae_contig7645:182..2533 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score412.5
Seed ortholog evalue1.9e-112
Seed eggNOG ortholog2880.D8LFS9
Preferred nameSETD4
KEGG rclassRC00003,RC00060,RC00181,RC00496
KEGG koko:K05662,ko:K19199
KEGG TC3.A.1.210
KEGG ReactionR03875,R04866,R04867
KEGG Pathwayko00310,ko02010,map00310,map02010
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016278,GO:0016279,GO:0016740,GO:0016741,GO:0018022,GO:0018023,GO:0018026,GO:0018193,GO:0018205,GO:0019538,GO:0022613,GO:0031974,GO:0031981,GO:0032259,GO:0036211,GO:0042254,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0070013,GO:0071704,GO:0071840,GO:0140096,GO:1901564
EggNOG free text desc.peptidyl-lysine monomethylation
EggNOG OGsKOG1337@1,KOG1337@2759
EC2.1.1.43
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko02000,ko03036
Ec32 ortholog descriptionSET domain and Rubisco LSMT substrate-binding domain protein
Ec32 orthologEc-01_001070.1
Exons5
Model size1041
Cds size1041
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7645.16572.1prot_L-elsbetiae_contig7645.16572.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig7645 182..2533 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816849.3825383-CDS-L-elsbetiae_contig7645:181..3761622816849.3825383-CDS-L-elsbetiae_contig7645:181..376Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7645 182..376 +
1691683859.8314607-CDS-L-elsbetiae_contig7645:181..3761691683859.8314607-CDS-L-elsbetiae_contig7645:181..376Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7645 182..376 +
1622816849.3975856-CDS-L-elsbetiae_contig7645:686..8301622816849.3975856-CDS-L-elsbetiae_contig7645:686..830Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7645 687..830 +
1691683859.8431218-CDS-L-elsbetiae_contig7645:686..8301691683859.8431218-CDS-L-elsbetiae_contig7645:686..830Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7645 687..830 +
1622816849.4098856-CDS-L-elsbetiae_contig7645:1109..12951622816849.4098856-CDS-L-elsbetiae_contig7645:1109..1295Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7645 1110..1295 +
1691683859.8526192-CDS-L-elsbetiae_contig7645:1109..12951691683859.8526192-CDS-L-elsbetiae_contig7645:1109..1295Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7645 1110..1295 +
1622816849.4209623-CDS-L-elsbetiae_contig7645:1789..19511622816849.4209623-CDS-L-elsbetiae_contig7645:1789..1951Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7645 1790..1951 +
1691683859.8616233-CDS-L-elsbetiae_contig7645:1789..19511691683859.8616233-CDS-L-elsbetiae_contig7645:1789..1951Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7645 1790..1951 +
1622816849.4376018-CDS-L-elsbetiae_contig7645:2179..25331622816849.4376018-CDS-L-elsbetiae_contig7645:2179..2533Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7645 2180..2533 +
1691683859.8740404-CDS-L-elsbetiae_contig7645:2179..25331691683859.8740404-CDS-L-elsbetiae_contig7645:2179..2533Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7645 2180..2533 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig7645.16572.1

>prot_L-elsbetiae_contig7645.16572.1 ID=prot_L-elsbetiae_contig7645.16572.1|Name=mRNA_L-elsbetiae_contig7645.16572.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=347bp
DDELQLLRGTSLHAVTARWKAQVDSDFGELEGLQLPSPPEDSCLTARDAL
GGFLTKEGYLWALGTVWSRFVTVEQGGRALKAMAPVFDMFNHDPLSSTVH
GFQESNQARPLLCCLHLVTLQDWAAGSEVKFSYGPLPNSRLLLLHGFCLP
DNAFEAVDLLAMMEPGAPNYAAKNKILEKNGVKSSTRPFVLTSKGLDPSL
LPALRVQRATESELKIAADQPWGESLGARNEAEVCEVLIAALSQMLKDRE
APPPSPASRGGPIAREEEEKEGASSGSSSNSSSNTPAAQGGAAASGEGEE
EGGAAQRGVLPEDRRRAIELLREGEASVLRSCLAWIEVSKDTARRS*
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mRNA from alignment at L-elsbetiae_contig7645:182..2533+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig7645.16572.1 ID=mRNA_L-elsbetiae_contig7645.16572.1|Name=mRNA_L-elsbetiae_contig7645.16572.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2352bp|location=Sequence derived from alignment at L-elsbetiae_contig7645:182..2533+ (Laminarionema elsbetiae ELsaHSoW15)
GACGATGAGCTACAGTTGTTGCGGGGCACTAGCCTGCACGCAGTCACGGC GCGGTGGAAAGCCCAGGTGGACAGCGACTTTGGCGAGCTGGAGGGGCTGC AGCTGCCCTCGCCCCCGGAGGATAGCTGTTTGACCGCGCGCGATGCCCTT GGGGGGTTCCTGACCAAGGAGGGGTACCTCTGGGCGCTCGGGACGGTGCG TGCTGTACCGCCGGCAGGCAAAAGCAAGGCGCATCGGAGGTTAAACCTCT AGTGGTGCCAAATCATGGTCCGCGTGCTGTACGGGACATCTGCGGTACCG CTTGTTGTTTCCGTACATCATGGGAAGGAGAAGACATGTAGAAGTACGTA TGTATCAATCCCGAAAGCGAAATTAAGCGGATAGAACTTTTCACCGACAA CACTCGTGGTGCCGCTGCTTTGCCGCCTCCAGAAGTACGTAACGCTTTGA ACCGCACGCATCCACGTTCCCGCCGTGATCCGTTGACTACCCGCGCCGAA GACAGGTGTGGAGCAGATTCGTGACGGTCGAGCAAGGGGGGCGCGCGTTG AAGGCCATGGCCCCAGTCTTCGACATGTTCAACCACGACCCTCTCTCGTC CACGGTGCACGGCTTCCAGGAATCCAACCAGGCGAGGCCACTACTGTGTG TTGCCCCGGTTGGGTCGTCTAGCCAGTCATAGTGGAGGAAGGGGGGCCAG TGGGGCAGATGACGAATACTCCAACAATGGGAAAAAAAAAAAACTGAGCA GATAAGAGAGATCACAGAAGTGGGTGTCAAGAGAGCCGCAAGGGGTAGTG TATTTTCAGGCGAAACCAGTCGATATCTACTGTGCCCACGTCTCCACCCA CTCGCTTGCATCTCGGCCAACAAACAAAGAAATCCCGCAGACCTCACGCT CGCGTGTTTTTTTGTTTTACGTTTTTAGTGCCTCCATCTGGTGACCCTGC AAGACTGGGCCGCCGGCAGCGAGGTCAAGTTCAGCTACGGTCCCCTGCCG AACTCGCGCCTGCTGTTGCTGCACGGGTTTTGCCTCCCGGACAACGCGTT CGAGGCGGTGGACCTGTTGGCGATGATGGAGCCGGGGGCACCCAACTACG CCGCGAAGAATAAGGTGTGTGAGGGGTTGTCGCGAAGAATAAGGTGTGTG GGGGAGTGTCGATGGCTGCTCAGAGTTAGGGAAGAAACGTCCGCCTTGGA AATTGTGTCGTCTTAATGCTCTTGCGGTGTGCAGCAACAGCAACAGAGCA TCGGTGTTGTCGGATTGTTTGGGCCACTATTTTGTAGAGGAGCCAGGGAA CAGCCGAGAGCAAGCTTGGCAAGAAGGAAAGCAGCGGCAATACACTTTTG TGCAGTATGTAGCAGCAGCAGCAGCAGCAGCAGCAGCAAGGAGATTGAAC GAGATTGGTAGACATTGTGCTTCCGCTCTATGCAGCGGTGCACGTCGAAG CGACGATGGAGAGATGCACGTCTATTTCGTGGTCGGCCTACTGTGCTGTC TTCGTGTTTTCCTCTCTCGTTTATTTTGGTTGAAATCAAATCAACTAAAT AGACAACGCGACACCGACCGCCCCGAGCCTTTAATTTCGCGTCACGGCCG AACGGCAGATACTAGAGAAAAACGGAGTGAAATCCTCGACGCGGCCGTTC GTCCTCACCAGCAAGGGGCTGGACCCTAGTTTGCTGCCAGCCCTGCGAGT ACAAAGGGCCACAGAGAGTGAGCTGAAGATCGCGGCGGACCAACCCTGGG GAGAAAGCTTGGGCGCAAGGGTGAGGCTTCTGACCATTTTTTACGACTCC CCCCCATGAACTTCCTCAGACGATCCAGAAGTTGTGTCCGAGGGTTAGAA GCGGTCCAAACCGGCGCAACCAATACTGTTGTACACACAGGACGATTCTT TGCGGTTCGTCTTCTTTCGACCAACCAAACAACACCGCTTTGTGCTGCCG CCCTGCCTGCCATCCACGACGACCGCTGAACGCCGCGTACATGCGTAGAA CGAGGCGGAAGTGTGCGAGGTGCTCATCGCGGCTCTCTCCCAGATGCTGA AAGACCGAGAGGCACCCCCGCCGAGTCCCGCATCCCGCGGCGGCCCCATC GCGAGAGAAGAAGAAGAAAAAGAAGGCGCGAGCAGCGGCAGCAGCAGCAA CAGCAGCAGCAACACGCCCGCTGCGCAGGGCGGGGCGGCGGCGTCTGGAG AAGGGGAAGAGGAGGGCGGGGCGGCGCAGCGGGGCGTCTTGCCCGAGGAC AGGCGGAGGGCGATCGAGCTGCTTCGGGAGGGAGAGGCTTCCGTGCTTCG ATCTTGCCTCGCCTGGATAGAGGTGAGCAAGGACACGGCACGGCGGTCGT GA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig7645:182..2533+

>mRNA_L-elsbetiae_contig7645.16572.1 ID=mRNA_L-elsbetiae_contig7645.16572.1|Name=mRNA_L-elsbetiae_contig7645.16572.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2082bp|location=Sequence derived from alignment at L-elsbetiae_contig7645:182..2533+ (Laminarionema elsbetiae ELsaHSoW15)
GACGATGAGCTACAGTTGTTGCGGGGCACTAGCCTGCACGCAGTCACGGC
GCGGTGGAAAGCCCAGGTGGACAGCGACTTTGGCGAGCTGGAGGGGCTGC
AGCTGCCCTCGCCCCCGGAGGATAGCTGTTTGACCGCGCGCGATGCCCTT
GGGGGGTTCCTGACCAAGGAGGGGTACCTCTGGGCGCTCGGGACGGACGA
TGAGCTACAGTTGTTGCGGGGCACTAGCCTGCACGCAGTCACGGCGCGGT
GGAAAGCCCAGGTGGACAGCGACTTTGGCGAGCTGGAGGGGCTGCAGCTG
CCCTCGCCCCCGGAGGATAGCTGTTTGACCGCGCGCGATGCCCTTGGGGG
GTTCCTGACCAAGGAGGGGTACCTCTGGGCGCTCGGGACGGTGTGGAGCA
GATTCGTGACGGTCGAGCAAGGGGGGCGCGCGTTGAAGGCCATGGCCCCA
GTCTTCGACATGTTCAACCACGACCCTCTCTCGTCCACGGTGCACGGCTT
CCAGGAATCCAACCAGGCGAGGCCACTACTGTGTGTGTGGAGCAGATTCG
TGACGGTCGAGCAAGGGGGGCGCGCGTTGAAGGCCATGGCCCCAGTCTTC
GACATGTTCAACCACGACCCTCTCTCGTCCACGGTGCACGGCTTCCAGGA
ATCCAACCAGGCGAGGCCACTACTGTGTTGCCTCCATCTGGTGACCCTGC
AAGACTGGGCCGCCGGCAGCGAGGTCAAGTTCAGCTACGGTCCCCTGCCG
AACTCGCGCCTGCTGTTGCTGCACGGGTTTTGCCTCCCGGACAACGCGTT
CGAGGCGGTGGACCTGTTGGCGATGATGGAGCCGGGGGCACCCAACTACG
CCGCGAAGAATAAGTGCCTCCATCTGGTGACCCTGCAAGACTGGGCCGCC
GGCAGCGAGGTCAAGTTCAGCTACGGTCCCCTGCCGAACTCGCGCCTGCT
GTTGCTGCACGGGTTTTGCCTCCCGGACAACGCGTTCGAGGCGGTGGACC
TGTTGGCGATGATGGAGCCGGGGGCACCCAACTACGCCGCGAAGAATAAG
ATACTAGAGAAAAACGGAGTGAAATCCTCGACGCGGCCGTTCGTCCTCAC
CAGCAAGGGGCTGGACCCTAGTTTGCTGCCAGCCCTGCGAGTACAAAGGG
CCACAGAGAGTGAGCTGAAGATCGCGGCGGACCAACCCTGGGGAGAAAGC
TTGGGCGCAAGGATACTAGAGAAAAACGGAGTGAAATCCTCGACGCGGCC
GTTCGTCCTCACCAGCAAGGGGCTGGACCCTAGTTTGCTGCCAGCCCTGC
GAGTACAAAGGGCCACAGAGAGTGAGCTGAAGATCGCGGCGGACCAACCC
TGGGGAGAAAGCTTGGGCGCAAGGAACGAGGCGGAAGTGTGCGAGGTGCT
CATCGCGGCTCTCTCCCAGATGCTGAAAGACCGAGAGGCACCCCCGCCGA
GTCCCGCATCCCGCGGCGGCCCCATCGCGAGAGAAGAAGAAGAAAAAGAA
GGCGCGAGCAGCGGCAGCAGCAGCAACAGCAGCAGCAACACGCCCGCTGC
GCAGGGCGGGGCGGCGGCGTCTGGAGAAGGGGAAGAGGAGGGCGGGGCGG
CGCAGCGGGGCGTCTTGCCCGAGGACAGGCGGAGGGCGATCGAGCTGCTT
CGGGAGGGAGAGGCTTCCGTGCTTCGATCTTGCCTCGCCTGGATAGAGGT
GAGCAAGGACACGGCACGGCGGTCGTGAAACGAGGCGGAAGTGTGCGAGG
TGCTCATCGCGGCTCTCTCCCAGATGCTGAAAGACCGAGAGGCACCCCCG
CCGAGTCCCGCATCCCGCGGCGGCCCCATCGCGAGAGAAGAAGAAGAAAA
AGAAGGCGCGAGCAGCGGCAGCAGCAGCAACAGCAGCAGCAACACGCCCG
CTGCGCAGGGCGGGGCGGCGGCGTCTGGAGAAGGGGAAGAGGAGGGCGGG
GCGGCGCAGCGGGGCGTCTTGCCCGAGGACAGGCGGAGGGCGATCGAGCT
GCTTCGGGAGGGAGAGGCTTCCGTGCTTCGATCTTGCCTCGCCTGGATAG
AGGTGAGCAAGGACACGGCACGGCGGTCGTGA
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