mRNA_L-elsbetiae_contig7630.16555.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig7630.16555.1
Unique NamemRNA_L-elsbetiae_contig7630.16555.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig7630.16555.1 vs. uniprot
Match: A0A6H5JM92_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM92_9PHAE)

HSP 1 Score: 489 bits (1259), Expect = 5.440e-165
Identity = 239/411 (58.15%), Postives = 282/411 (68.61%), Query Frame = 1
Query:   13 IGNGYCDSDNNNELCGYDGGDCCECTCTTPDGGGESSY--------GSCTGGFACIDPAAACVDDDDITADMVENCSYAESIGDGYCQSENNNELCGYDGGDCCECTCTVPDGSEDY--------YG-CTGGFACIDPAAACVDDDDITADMFEYCGYIEGVGNGSCDSENNNELCRYDGGDCCECTCTVPDDGDDFYGCTGGFACIDPAAACVDDDDITADMVENCGSAERIGNGYCDPENNIELCGYDGGDCCECTCEVEESADDGSDGRHNGCTQFACIDPSASCVDDDDITVDMLANCNYVIGVGDGYCEAEMNTPECNYDGGDCCECTCEVGEFTNYYGSDGRHNGCTQFACIDPSASCVDDDDITVDMLADCSYVLGIGDGYCNAEMNTPECNYDGGDCCRCTCQ 1194
            +G+GYCD DNNNE+CGYDGGDCCECTC      G+S +         S   GFACIDPAA CV+DDDITADMVENC Y   +GDG+C  ENNNELCGYDGGDCCECTC  P   +D+        YG C GGFACIDP+AACVDDD++T  M E C  +  +G+G C+ +NNNE C YDGGDCCECTC   D  ++  G    FACIDPAA CVDDD  T DM++NC     IGNG+CD +NN ELC YDGGDCCECTCE  E  DD    R+N    FAC+DP+A CVDDD +T+DML NC + +G+GDGYC  ++NTPEC YDGGDCC CTC+     N    D        FACIDP A+CV+DDDITVDM  +C Y + +GDG+C+   N   C YDGGDCC CTC+
Sbjct:   59 LGDGYCDQDNNNEICGYDGGDCCECTCVACKKHGQSPWDDDDDWLCSSGGSGFACIDPAAPCVEDDDITADMVENCGYVRGLGDGWCHEENNNELCGYDGGDCCECTCVAPPADDDWXXXXXXXXYGACGGGFACIDPSAACVDDDEVTVGMVESCDTVS-IGDGYCNMDNNNEACAYDGGDCCECTCE--DTPNNRCGRWSSFACIDPAAPCVDDDSFTVDMIDNCEYPGGIGNGWCDVDNNNELCAYDGGDCCECTCESLE--DDDWACRNN----FACVDPNAPCVDDDSVTIDMLENCPWAVGIGDGYCSEDLNTPECAYDGGDCCACTCQ-----NDVDDDWXXXX---FACIDPEAACVNDDDITVDMFVNCEYPVNVGDGWCDQGNNNEACGYDGGDCCECTCE 452          
BLAST of mRNA_L-elsbetiae_contig7630.16555.1 vs. uniprot
Match: A0A6H5JTT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT4_9PHAE)

HSP 1 Score: 393 bits (1010), Expect = 6.390e-129
Identity = 210/404 (51.98%), Postives = 245/404 (60.64%), Query Frame = 1
Query:   22 GYCDSDNNNELCGYDGGDCCECTCTTPDGGGESSYGSCTGGFACIDPAAACVDDDDITADMVENCSYAESIGDGYCQSENNNELCGYDGGDCCECTCTVPDGSEDYYGCTGG----FACIDPAAACVDDDDITADMFEYC-----GYIEGVGNGSCDSENNNELCRYDGGDCCECTCTVPDDGDDFYGC-TGGFACIDPAAACVDDDDITADMVENCGSAERIGNGYCDPENNIELCGYDGGDCCECTCEV--EESADDGSDGRHNGCTQFACIDPSASCVDDDDITVDMLANCN-YVIGVGDGYCEAEMNTPECNYDGGDCCECTCEVGEFTNYYGSDGRHNGCTQFACIDPSASCVDDDDITVDMLADCSYVLGIGDGYCNAEMNTPECNYDGGDCCRCTCQ 1194
            G CD+ NNN  C YDGGDCC CTC         +Y     GF C+DP+A CVDDDDI  + V+NC    +IGDG C  +NN E C YDGGDCC CTC VPD      G   G    FACIDP A CV+DDD TA + E       G I  + +G CD  NNNE C YDGGDCC CTC      DDFY C   GFACIDP+A C DDDD+T D VENCG    IG+G CD +NN E C YDGGDCC CTC+V  ++S DDGS    +  T FACIDP A CV+DDDITVDM+  C  + I  GDG+C+ + N  EC YD GDCC CTC  G +           G   F C+DPSA CVDDD  +  +  DC     + +GYC+ + N  EC YDGGDCC CTC+
Sbjct:   40 GECDTHNNNAECEYDGGDCCSCTCQ------NDTYDCGVSGFDCVDPSAECVDDDDIGTETVQNCGDPWAIGDGNCDKDNNTEECDYDGGDCCSCTCQVPDDGTGDDGSLCGESAVFACIDPDAPCVNDDDFTAFLPEVVKETCGGNIVHLADGDCDQINNNEECGYDGGDCCFCTCL-----DDFYECGIRGFACIDPSAECADDDDVTVDTVENCG-VRSIGDGQCDLDNNREECHYDGGDCCSCTCQVPDDDSGDDGS--LCSESTVFACIDPDAPCVNDDDITVDMMDTCGGHPINFGDGWCDDDNNNKECGYDSGDCCSCTCVDGTY---------ECGIVGFDCVDPSAECVDDDYPSTGVTDDCGNAGTVANGYCDFDNNKEECAYDGGDCCECTCE 420          
BLAST of mRNA_L-elsbetiae_contig7630.16555.1 vs. uniprot
Match: A0A6H5KJK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJK5_9PHAE)

HSP 1 Score: 394 bits (1011), Expect = 3.920e-127
Identity = 209/387 (54.01%), Postives = 251/387 (64.86%), Query Frame = 1
Query:   58 GYDGGDCCECTCTTPDGGGESSYGSCTGGFACIDPAAACVDDDDITADMVENCS----YAESIGDGYCQSENNNELCGYDGGDCCECTCTVPDGSEDYYGCTG-GFACIDPAAACVDDDDITADMFEYC----GYIEGVGNGSCDSENNNELCRYDGGDCCECTCTVPDDGDDFYGCTGGFACIDPAAACVDDDDITADMVENCGSAERIGNGYCDPENNIELCGYDGGDCCECTCEVEESADDGSDGRHNGCTQFACIDPSASCVDDDDITVDMLANCNYVIGVGDGYCEAEMNTPECNYDGGDCCECTCEVGEFTNYYGSDGRHNGCTQFACIDPSASCVDDDDITVDMLADCSYVLGIGDGYCNAEMNTPECNYDGGDCCRCTC 1191
            GYDGGDCCECTC       ++S+    GGFACIDP+AACVDDD+IT D+ E+C+    Y  SIGDG+C  ENNNE+C YDGGDCCECTC      + +Y C    FACIDP+AACVDDD+ITAD+ E C    GY+ G+GNG C+  NN E C YD GDCC+CTC +  D    + C   FAC+DP A CVDDD +T  M E+C +    G+G+C+  NN E CGYDGGDCCECTC V+ SA+        GCT+FACIDP+A CVDDDD+T D L NC  +  +GDGYC+   N   C+YDGGDCCECTC         GSD     C+ F CIDP+ASC D+  ITVDM   C   L +GD  C    N   C+YD GDCC  TC
Sbjct:   18 GYDGGDCCECTCV------DASFTCGYGGFACIDPSAACVDDDNITEDIAESCNDGGGYVASIGDGFCSDENNNEVCDYDGGDCCECTCV-----DAFYPCGYVAFACIDPSAACVDDDNITADIAESCHDGGGYVAGLGNGYCNEANNIEECDYDAGDCCQCTCGIESDDLSDFSCVD-FACVDPNAPCVDDD-VTEGMFEDCFN---FGDGFCNDYNNNEQCGYDGGDCCECTCVVDWSAE-------FGCTEFACIDPTAPCVDDDDVTADALENC-MIEYLGDGYCDTYNNNEICDYDGGDCCECTCGSDSTDVLVGSD-----CSDFVCIDPTASCFDES-ITVDMYEYCDVEL-LGDSICQPSNNFEVCDYDFGDCCEATC 373          
BLAST of mRNA_L-elsbetiae_contig7630.16555.1 vs. uniprot
Match: D7G0S4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S4_ECTSI)

HSP 1 Score: 374 bits (961), Expect = 5.390e-126
Identity = 185/309 (59.87%), Postives = 214/309 (69.26%), Query Frame = 1
Query:   58 GYDGGDCCECTCTTPDGGGESSYGSCTGGFACIDPAAACVDDDDITADMVENCSYAESIGDGYCQSENNNELCGYDGGDCCECTCTVPDGSEDYYGCTGGFACIDPAAACVDDDDITADMFEYCGYIEGVGNGSCDSENNNELCRYDGGDCCECTCTV--PDDGDDFY---GCTGGFACIDPAAACVDDDDITADMVENCGSAERIGNGYCDPENNIELCGYDGGDCCECTCEVEESADDGSDGRHNGCTQFACIDPSASCVDDDDITVDMLANCNYVIGVGDGYCEAEMNTPECNYDGGDCCECTCEV 969
            G+DGGDCCECTC +     + S  S   GFAC+DP A CVDDDDIT +   NC +    GDG+C  ENNNE+CGYDGGDCCECTC   +  +D Y C    ACIDP+A CVDDDD+T DM E CGY+  VGNG CD ENNNE C YDGGDCCECTC     DDG D Y   GC  GFACIDP A CV+DDDIT D+VENC S   +GNG+CD +NN E C YDGGDCCECTCE + + + G   R +G   FACIDP A CVD+D  TVDM+ +C Y    G+G+C+ + N  EC YDGGDCCECTCEV
Sbjct:    5 GFDGGDCCECTCVSVYDD-DYSCSSTDSGFACVDPTAPCVDDDDITIEQALNC-FPREFGDGWCDQENNNEICGYDGGDCCECTCV--NAWDDDYSCAANSACIDPSAPCVDDDDVTVDMVENCGYVGSVGNGWCDEENNNEGCGYDGGDCCECTCQPLDTDDGTDDYFQNGCGNGFACIDPNAPCVNDDDITLDIVENCDSV-AVGNGFCDMDNNNEACAYDGGDCCECTCEDQPNQECG---RWSG---FACIDPEAPCVDEDSFTVDMVESCKYPGSFGNGWCDEDNNIEECAYDGGDCCECTCEV 302          
BLAST of mRNA_L-elsbetiae_contig7630.16555.1 vs. uniprot
Match: A0A6H5JXR2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXR2_9PHAE)

HSP 1 Score: 370 bits (950), Expect = 3.250e-117
Identity = 217/487 (44.56%), Postives = 257/487 (52.77%), Query Frame = 1
Query:   52 LCGYDGGDCCECTCTTPDGGGESSYGSCTG-GFACIDPAAACVDDDDITADMVENCSYAESIGDGYCQSENNNELCGYDGGDCCECTCTVPDGSEDYYGCTGGFACIDPAAACVDDDDITADMFEYCGYIEGVGNGSCDSENNNELCRYDGGDCCECTCTVP------DDGDDFYG-CTGGFACIDPAAACVDDDDITADMVENCGSAERIGNGYCDPENNIELCGYDGGDCCECTCEVEESADDGSDGRHNGCTQFACIDPSASCVDDD------------------------------------------------------------------------------------------DITVDMLANCNYVIGVGDGYCEAEMNTPECNYDGGDCCECTCE--------VGEFTNYYGSDGRHNGCTQFACIDPSASCVDDDDITVDMLADCSYVLGIGDGYCNAEMNTPECNYDGGDCCRCTCQ 1194
            L GYDGGDCCECTC  P G  +    S  G GFACIDP A+CVDDDDIT ++ +NC     +GDG+C  +NNNE+CGYDGGDCCECTC  P   +D + C    ACIDP A CVDDDDITA M E CG++ GVG+G CD +NNNELC YDGGDCCECTC  P      D  DD+YG C  GFACIDP A CV+DDDIT D+ E+C  A  +G+GYCD  NNIE CG     C   +C       +   GR +G   FACIDP A CVDDD                                                                                          ++TVDM+ NC++  G+GDGYC   +NTPEC        E T E        +    N Y  D     CT+FACIDP A+CVDDDDITVDM+ +C Y L +GDG+C+   N   C YDGGDCC CTC+
Sbjct:   18 LPGYDGGDCCECTCVNPWGDDDDWVCSKDGSGFACIDPDASCVDDDDITVEIAQNCD-TWGLGDGWCDQDNNNEICGYDGGDCCECTCVSPWDDDDDWACRNYNACIDPDAPCVDDDDITAVMVEECGWVRGVGDGWCDEDNNNELCGYDGGDCCECTCEAPPADDDWDWDDDWYGPCGSGFACIDPNAPCVNDDDITVDVDESC-DAVNMGDGYCDISNNIEACGA----CSWLSCT---DTPNNKCGRWSG---FACIDPEAPCVDDDSFTVDMIDNCDWGIGDGWCDEDNNNELCGDRVIEGWESIVNATAERVVRTTVVRCGVSVKWLDNELKEEIGERREVFKQFLSEAFEESWENVTVDMIENCSWSTGIGDGYCSENLNTPECATAPFVSLE-TVETRISLHLPLALRQNIYDDDWS---CTRFACIDPEAACVDDDDITVDMIENCDYPLSVGDGWCDKGNNNEACGYDGGDCCECTCE 488          
BLAST of mRNA_L-elsbetiae_contig7630.16555.1 vs. uniprot
Match: D7FI87_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI87_ECTSI)

HSP 1 Score: 358 bits (920), Expect = 1.360e-115
Identity = 191/378 (50.53%), Postives = 224/378 (59.26%), Query Frame = 1
Query:  220 YAESIGDGYCQSENNNELCGYDGGDCCECTCTVPDGSEDYYGCTG---GFACIDPAAACVDDDDITADMFEYCGYIEGVGNGSCDSENNNELCRYDGGDCCECTCTVPDDGDDFYGCTG---GFACIDPAAACVDDDDITADMVENCGSAERIGNGYCDPENNIELCGYDGGDCCECTCEVEESADDGSDGRHNGCTQ-------------FACIDPSASCVDDDDITV--------------------------------DMLANCNYVIGVGDGYCEAEMNTPECNYDGGDCCECTCEVGEFTNYYGSDGRHNGCTQFACIDPSASCVDDDDITVDMLADCSYVLGIGDGYCNAE--MNTPECNYDGGDCCRCTCQ 1194
            + +  GDGYCQ +NNN  CGYDGGDCCECTC  P G +D + C+    GFACIDP A CVDDDDIT ++ + C     +GNG CD +NNNE+C YD GDCCECTC  P D DD+Y C+    GFACIDPAA CVDDDD+T DMVENCG    +G+G+CD  NN ELCGYDGGDCCECTC    + DD                        FACIDP+A+CV+DDDITV                                DM+ NC Y  GVGDGYC  + N   C YDGGDCC CTC+     N +  D     CT FACIDP A+CV+DDDITVDM  +C Y + IG+G+      +      YDGGDCC CTCQ
Sbjct:   25 WEDGFGDGYCQLQNNNAECGYDGGDCCECTCQNPWGDDDEWFCSKDGYGFACIDPDAPCVDDDDITIEIAQNC-VTSDLGNGYCDEDNNNEICGYDFGDCCECTCVSPWDDDDWY-CSSDGSGFACIDPAAPCVDDDDVTIDMVENCGYVRGLGDGWCDDWNNNELCGYDGGDCCECTCVAPPANDDWDXXXXXXXXXXXXXXXXGACGGGFACIDPNAACVNDDDITVGMDTPSNKCGWRXXXXXXXXXXXXXXXXXXXXDMIENCEYPWGVGDGYCNQQNNNELCAYDGGDCCSCTCQ-----NDFDDDWA---CTTFACIDPEAACVNDDDITVDMFVNCEYPVDIGNGWLRWRRLLRVHMRGYDGGDCCSCTCQ 392          
BLAST of mRNA_L-elsbetiae_contig7630.16555.1 vs. uniprot
Match: D7G3F4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F4_ECTSI)

HSP 1 Score: 320 bits (821), Expect = 6.160e-102
Identity = 166/275 (60.36%), Postives = 180/275 (65.45%), Query Frame = 1
Query:   13 IGNGYCDSDNNNELCGYDGGDCCECTCTTPDGGGESSYGSCTGGFACIDPAAACVDDDDITADMVENCSYAESIGDGYCQSENNNELCGYDGGDCCECTCTVPDGSEDYYGCTGGFACIDPAAACVDDDDITADMFEYCGYIEGVGNGSCDSENNNELCRYDGGDCCECTCTV--PDDGDDF--YGCTGGFACIDPAAACVDDDDITADMVENCGSAERIGNGYCDPENNIELCGYDGGDCCECTCEVEESADDGSDGRHNGCTQFACIDPSASC 825
            IG+G+CD DNNNELC YDGGDCCECTC     G E     C   FAC+DP A CVDDD +T DM+ENCS++  IGDGYC    N   C YDGGDCC CTC  P   +D +GC   FACIDP AACVDDDDIT DMFE C Y   +GNG CD  NN E C YDGGDCCECTC    P D DD   Y C   FACIDP+A CVDDDDIT DMVENCG    IGNG+CD  NN E CGYDGGDCC CTCE     D      +     F C DP+ASC
Sbjct:   63 IGDGWCDEDNNNELCAYDGGDCCECTCE----GSEDDDWHCRN-FACVDPNAPCVDDDSVTIDMIENCSWSTGIGDGYCSENLNTPECAYDGGDCCSCTCESP--YDDDWGCMW-FACIDPEAACVDDDDITVDMFENCEYPVDIGNGWCDEANNIEACGYDGGDCCECTCEYESPYDWDDDWDYHCME-FACIDPSAPCVDDDDITVDMVENCGYVSGIGNGWCDRNNNKEECGYDGGDCCSCTCESPYDDDYSCSSEYGS---FDCKDPNASC 325          
BLAST of mRNA_L-elsbetiae_contig7630.16555.1 vs. uniprot
Match: D7G4F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4F9_ECTSI)

HSP 1 Score: 296 bits (758), Expect = 7.860e-93
Identity = 149/280 (53.21%), Postives = 181/280 (64.64%), Query Frame = 1
Query:  235 GDGYCQSENNNELCGYDGGDCCECTCTVPDGSEDYYGCT---GGFACIDPAAACVDDDDITADMFEYCGYIEGVGNGSCDSENNNELCRYDGGDCCECTCTVPDDGD---DFY-GCTGGFACIDPAAACVDDDDITADMVENCGSAERIGNGYCDPENNIELCGYDGGDCCECTCEVEESADDGSDGRHNGCTQFACIDPSASCVDDDDITVDMLANCNYVIGVGDGYCEAEMNTPECNYDGGDCCECTCEVGEFTNYYGSDGRHNGCTQFACIDPSASC 1053
            GDGYC   NNN  CGYDGGDCCECTC  P G + ++ C+    GFAC+DP A C  +D +T +  + C + + +G+G CD  NNNELC YDGGDCCECTC VP D D   D Y  C  GFACIDP+A CV+DDDIT D+ E+C  A  +G+GYCD +NN   C YDGGDCCECTCE              G + FACIDP A CVDDD +TVDM+ NC+Y+  +G+G+C+ E N   C YDGGDCCECTCE   + + Y     H     F C DP+ASC
Sbjct:   37 GDGYCTPPNNNAECGYDGGDCCECTCQNPQGGDHHWICSKNGSGFACVDPDAPCYAEDGVTVEASQECDFWD-LGDGWCDQVNNNELCGYDGGDCCECTCEVPTDDDWDNDLYVACGEGFACIDPSAPCVNDDDITVDVDESC-DAVGMGDGYCDMDNNNAACAYDGGDCCECTCEPNNKC--------GGRSGFACIDPGAPCVDDDSVTVDMIDNCDYLRVMGNGWCDEENNNELCAYDGGDCCECTCESA-WNDDYTCSSEHG---TFNCKDPNASC 302          
BLAST of mRNA_L-elsbetiae_contig7630.16555.1 vs. uniprot
Match: D8LEP6_ECTSI (Uncharacterized protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEP6_ECTSI)

HSP 1 Score: 283 bits (723), Expect = 7.100e-89
Identity = 156/312 (50.00%), Postives = 187/312 (59.94%), Query Frame = 1
Query:  193 TADMVENCSYAESIGDGYCQSENNNELCGYDGGDCCECTCTVPDGSE---DYYGCTGGFACIDPAAACVDDDDITADMFEYCGYIEGVGNGSCDSENNNELCRYDGGDCCECTCTVP-----DDGDDFYGCT----GGFACIDPAAACVDDDDITADMVENCGSAERIGNGYCDPENNIELCGYDGGDCCECTCEVEESADDGSDGRHNGCT--QFACIDPSASCVDDDDITVDMLANCNYVIGVGDGYCEAEMNTPECNYDGGDCCECTCEVGEFT-NYYGSDGRHNGCTQFACIDPSASCVDDDDITVDM 1083
            T+D  + C  A+ IG+G C   NN E CG+DGGDCCECTC   DG      YY    G+ACIDP A CVDDD +T DM E C     +GNG+CDS  NNE C YDGGDCCECTC        D G    GC     GGFACIDP A CVDDD +TA+M++ C S  +IGNGYCD  NN   C YDGGDCCECTCE  +      DG    C    FACIDP A CVDDDD T +   +C +V  +GDG C+ E N  EC +DGGDCC+CTC V     + Y     +N    F C+D SASC  ++ ++ ++
Sbjct:   85 TSDQFDACDAAQDIGNGRCNMGNNIEECGFDGGDCCECTCE--DGEYTCGQYY----GYACIDPDATCVDDDAVTVDMMENCYDPSRIGNGACDSLLNNEDCAYDGGDCCECTCDPSRYPWYDSG---VGCQTGMYGGFACIDPDAPCVDDDIVTAEMMDLC-STGQIGNGYCDDSNNSPECAYDGGDCCECTCESHD------DGYEYYCEPGSFACIDPEAECVDDDDNTAEQYEHCGWVTRIGDGMCDDENNKEECGFDGGDCCDCTCVVPSSAWSDYACQEVYN-INSFDCLDTSASCYGEEHLSYEL 379          
BLAST of mRNA_L-elsbetiae_contig7630.16555.1 vs. uniprot
Match: A0A6H5K4R2_9PHAE (LNR domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4R2_9PHAE)

HSP 1 Score: 256 bits (655), Expect = 3.390e-79
Identity = 152/339 (44.84%), Postives = 173/339 (51.03%), Query Frame = 1
Query:   58 GYDGGDCCECTCTTPDGGGESSYGSCTGGFACIDPAAACVDDDDITADMVENCSYAESIGDGYCQSENNNELCGYDGGDCCECTCT------VPDGSEDYYGCTGGFACIDPAAACVDDDDITADMFEYCGYIEGVGNGSCDSENNNE--------------------------------LCRYDGGDCCECTCTVPDDGDDFYGCTGGFACIDPAAACVDDDDITADMVENCGSAERIGNGYCDPENNIELCG--------------------------------YDGGDCCECTCEVEESADDGSDGRHNGCTQ------FACIDPSASCVDDDDIT 846
            G+DGGDCCECTC      GE + G   G +ACIDP AACVDDD +T DM+ENC  A  IG+G C S  NNE C YDGGDCCECTC          G     G  GGFACIDP A CVDDD +T +M + C Y   +GNG CD  NN+                                  C YDGGDCCECTC   DDG ++Y   G FACIDP A CVDDDD TA+  E+CG   RIG+G CD ENN E CG                                +DGGDCCECTC V  S      G    C +      F C+D SASC  D+D+T
Sbjct:    2 GFDGGDCCECTCED----GEYTCGQYVG-YACIDPGAACVDDDAVTVDMMENCYDASRIGNGACDSLLNNEECAYDGGDCCECTCDPSRYPWYDSGEGCQTGMYGGFACIDPDAPCVDDDIVTVEMMDLC-YTGQIGNGYCDDVNNSPECGMICDAPRVKFICTVFRLQKRDRTFSMLLYSCAYDGGDCCECTCESHDDGYEYYCKPGSFACIDPGAECVDDDDNTAEQYEHCGWVTRIGDGMCDDENNKEECGKGVPRFPKWRAPCDVVDESITAGILRLVTSTGFDGGDCCECTCVVSASG-----GSPYACQEIYNINSFDCLDTSASCYGDEDLT 329          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7630.16555.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JM92_9PHAE5.440e-16558.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTT4_9PHAE6.390e-12951.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KJK5_9PHAE3.920e-12754.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0S4_ECTSI5.390e-12659.87Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JXR2_9PHAE3.250e-11744.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FI87_ECTSI1.360e-11550.53Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G3F4_ECTSI6.160e-10260.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G4F9_ECTSI7.860e-9353.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LEP6_ECTSI7.100e-8950.00Uncharacterized protein n=3 Tax=Ectocarpus silicul... [more]
A0A6H5K4R2_9PHAE3.390e-7944.84LNR domain-containing protein n=1 Tax=Ectocarpus s... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7630contigL-elsbetiae_contig7630:4572..8522 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score183.7
Seed ortholog evalue1.7e-43
Seed eggNOG ortholog2880.D7FX77
Hectar predicted targeting categoryother localisation
EggNOG OGs2E9KF@1,2SFXU@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons8
Model size1194
Cds size1194
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7630.16555.1prot_L-elsbetiae_contig7630.16555.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig7630 4572..8522 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816847.9615521-CDS-L-elsbetiae_contig7630:4571..48061622816847.9615521-CDS-L-elsbetiae_contig7630:4571..4806Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7630 4572..4806 +
1691683858.833799-CDS-L-elsbetiae_contig7630:4571..48061691683858.833799-CDS-L-elsbetiae_contig7630:4571..4806Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7630 4572..4806 +
1622816847.971985-CDS-L-elsbetiae_contig7630:5195..54081622816847.971985-CDS-L-elsbetiae_contig7630:5195..5408Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7630 5196..5408 +
1691683858.8491457-CDS-L-elsbetiae_contig7630:5195..54081691683858.8491457-CDS-L-elsbetiae_contig7630:5195..5408Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7630 5196..5408 +
1622816847.981927-CDS-L-elsbetiae_contig7630:5681..58941622816847.981927-CDS-L-elsbetiae_contig7630:5681..5894Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7630 5682..5894 +
1691683858.8606653-CDS-L-elsbetiae_contig7630:5681..58941691683858.8606653-CDS-L-elsbetiae_contig7630:5681..5894Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7630 5682..5894 +
1622816847.9936676-CDS-L-elsbetiae_contig7630:6212..64241622816847.9936676-CDS-L-elsbetiae_contig7630:6212..6424Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7630 6213..6424 +
1691683858.8719378-CDS-L-elsbetiae_contig7630:6212..64241691683858.8719378-CDS-L-elsbetiae_contig7630:6212..6424Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7630 6213..6424 +
1622816848.0046034-CDS-L-elsbetiae_contig7630:6635..66901622816848.0046034-CDS-L-elsbetiae_contig7630:6635..6690Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7630 6636..6690 +
1691683858.8866565-CDS-L-elsbetiae_contig7630:6635..66901691683858.8866565-CDS-L-elsbetiae_contig7630:6635..6690Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7630 6636..6690 +
1622816848.015948-CDS-L-elsbetiae_contig7630:7405..75781622816848.015948-CDS-L-elsbetiae_contig7630:7405..7578Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7630 7406..7578 +
1691683858.8969266-CDS-L-elsbetiae_contig7630:7405..75781691683858.8969266-CDS-L-elsbetiae_contig7630:7405..7578Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7630 7406..7578 +
1622816848.0323403-CDS-L-elsbetiae_contig7630:7753..78081622816848.0323403-CDS-L-elsbetiae_contig7630:7753..7808Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7630 7754..7808 +
1691683858.9059358-CDS-L-elsbetiae_contig7630:7753..78081691683858.9059358-CDS-L-elsbetiae_contig7630:7753..7808Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7630 7754..7808 +
1622816848.0463738-CDS-L-elsbetiae_contig7630:8484..85221622816848.0463738-CDS-L-elsbetiae_contig7630:8484..8522Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7630 8485..8522 +
1691683858.915449-CDS-L-elsbetiae_contig7630:8484..85221691683858.915449-CDS-L-elsbetiae_contig7630:8484..8522Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7630 8485..8522 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig7630.16555.1

>prot_L-elsbetiae_contig7630.16555.1 ID=prot_L-elsbetiae_contig7630.16555.1|Name=mRNA_L-elsbetiae_contig7630.16555.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=398bp
FSPYIGNGYCDSDNNNELCGYDGGDCCECTCTTPDGGGESSYGSCTGGFA
CIDPAAACVDDDDITADMVENCSYAESIGDGYCQSENNNELCGYDGGDCC
ECTCTVPDGSEDYYGCTGGFACIDPAAACVDDDDITADMFEYCGYIEGVG
NGSCDSENNNELCRYDGGDCCECTCTVPDDGDDFYGCTGGFACIDPAAAC
VDDDDITADMVENCGSAERIGNGYCDPENNIELCGYDGGDCCECTCEVEE
SADDGSDGRHNGCTQFACIDPSASCVDDDDITVDMLANCNYVIGVGDGYC
EAEMNTPECNYDGGDCCECTCEVGEFTNYYGSDGRHNGCTQFACIDPSAS
CVDDDDITVDMLADCSYVLGIGDGYCNAEMNTPECNYDGGDCCRCTCQ
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mRNA from alignment at L-elsbetiae_contig7630:4572..8522+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig7630.16555.1 ID=mRNA_L-elsbetiae_contig7630.16555.1|Name=mRNA_L-elsbetiae_contig7630.16555.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3951bp|location=Sequence derived from alignment at L-elsbetiae_contig7630:4572..8522+ (Laminarionema elsbetiae ELsaHSoW15)
TTTTCCCCCTACATAGGCAACGGCTATTGCGATTCCGACAACAACAACGA GCTCTGCGGATACGACGGTGGAGACTGCTGCGAGTGCACCTGCACGACCC CTGATGGAGGCGGCGAGTCTTCCTACGGCTCTTGCACCGGCGGTTTCGCC TGCATCGACCCGGCCGCGGCATGCGTGGACGATGACGATATCACCGCGGA CATGGTCGAAAACTGCAGCTACGCCGAAAGCATCGGTACGCGAACCGCCA ATTAATTGACAACAACTTGTCGTTTTGAACCTGTTTCAGCTGAATGGTGC GACCGACATTATGTGGTCCCAAAAAATCATCTGCGTTTCTCCCACATCTA GATAAGGTGGAACCCTAACCAATGGAAGAATTACGTAATACAATAGCGGA ACGCCTTCGGCCTCAATACATCAGTATGTATCCATTGATGGCGCCGTGAA AACCCCTGCCAACAAACAGCACATCTAAAGCCTGTGCACAAGCCTCAAGC GTTGGCGTCCCTCTTCGACCTTGAACGGATAGCTAATGTAGAAATACTCG CAGGATTGCGTCACCTGACCATCGATTCAGACAGGAATATACCACCTTGC GCCAATGGTTCGGACGTTTCCCAGGCGATGGTTATTGCCAGTCTGAAAAT AACAACGAACTCTGTGGATACGACGGCGGAGACTGCTGCGAGTGTACGTG CACGGTCCCTGACGGCAGCGAGGATTACTACGGGTGCACGGGCGGTTTCG CCTGTATCGACCCGGCCGCGGCATGCGTGGACGATGATGACATCACCGCT GACATGTTCGAGTATTGCGGGTACATCGAAGGCGTCGGTAAGACCACCAT CCCGCCAGAGTTGTAGCTTGAGACAGAAGAATATCCGGATGATATCAAAT TTTCCACTTGTCCTGCGAGCCAAGACCAACAACGGCAACCTGGCTGCAGA AGCTGCAACCCGCGGAGGCTACCACGTGAACGAGCAGCTCAAATATGTCA AACCTTGTGGCAACTTTATCAGACTGCAAACGCCCGAGTAGTCATTGCAA TATAACCAACAACACAAATTCTTTGACATGGGGCTTTCGCCGTCGCTTTG ATATCCCCAGGCAATGGTTCTTGCGACTCTGAGAACAACAACGAGCTCTG CAGATACGACGGCGGAGACTGCTGCGAGTGCACGTGCACGGTTCCTGACG ACGGCGACGATTTCTACGGCTGCACGGGCGGTTTCGCCTGTATCGACCCG GCCGCGGCATGCGTGGACGATGATGACATCACTGCTGACATGGTTGAAAA CTGTGGCTCCGCCGAGCGCATTGGTAAGTGGTCTGCGAAATTTGTGACAA TGCTGCGCTCTAGCTGAGTGGCGTGATCGGAAACTACAAGTTCCGAAATA TCATATCTGTGTTTCTCCCATAGCTATAATTCTCAATAGGTAACAACAAC TCCAGCCTGTGCACAAATCTCAAGCGTTGGCGCCCCTGGTGAGCCTTGCA CATATGGCGCATGTAGACATATCTCAACAGTTGCTTCAGCTGCCCATCGA CTTGGGCGGCAGCAAAATCACCTCCTTATTCCATCGGCTCGGACACTGAA CGCTGTGGTCACCGCTCCGATATATATTCGGCGTTCCCCAGGCAACGGTT ATTGCGATCCTGAGAACAATATTGAACTGTGCGGATACGACGGCGGAGAC TGCTGCGAGTGCACGTGCGAGGTAGAGGAATCCGCCGATGACGGATCGGA CGGTCGCCACAACGGCTGCACCCAGTTTGCGTGCATCGACCCCTCCGCCT CGTGCGTCGACGACGACGACATCACCGTCGACATGCTCGCGAACTGCAAC TACGTAAGTCCGACTGGTGCACCGCACGCTTGATATGCTTTCCGTTGGAA TGCGTTCAAAGAAGCTGCTGCAAAGAGGGAATAGCTGCGCGGGCGCTCAG GAGGTCGAACTGACGCGCAAGGCCACTGTTGGTTCTTCCCGAGATGTTGT AGCAACTCTGCGAACAAGCAGCTGCTGAAGTCTCACCGCCCTCTACCTGT TTCATTGCCTGCAGGTTATCGGCGTCGGTGACGGATACTGCGAGGCCGAG ATGAACACGCCAGAATGCAGTGAGTTGTTTTTGTCGAAATAAATCGATGA AGTATGTGCTGTAGCGTCGGAGGCGTGTGCTTGGCGGTGCGTAGAACTCG GCCGGGAGTCGAAGAGAAACCACGGCCGTCTGCTCCAACATGCTTGAGGA GGTCCTCCGGGGACCTTCTACGACTATCTAGCGCTGGCCCTCCTTTCGCT CTGCTACGTCTTCCTCGGTGACGAGAGTTCCGACCTCAAGTATCTTCGGT ACAAATAGCCACCCGCCGCGCTATCTGACGAACACCTGCCTCCCGATGCT AGATGGCCGCTTCGGCCCGTTCTGTTGTCGGCGTTGTTAGATTGATGTGT ACTTTTTCGTTGTTGCCTGCGACAGCCGTTCTCTGAGCGTGTTCCGTGCA CGCGGAGGCGCAGCAATAGTAGTGGCTTGAATAGGGCGGGTTTCACAGGA TTTATCCCGTATTAGCGGTCGTGGTCGTAGCGAGGCATGGCGTGCTTACG GCAAAGAGCGTCTGGTGGCCACACGCACCAACTCAGGTACATACCTATGT ACCATCCAAACATACCCCTTCCTCCTGTTGTTCGTCGGGCAGATGACAAC GGCTATATATGTAGCCCACGTAACATGGTACGTGATCGGAAATCGATTTT GTCTGCTCACCCGGCCACCCACGGATTGTTCCTTCTCATCTCCCCGTGTT GCCTGTTGGTATTCTCTGGTGGTCCTTCTTGAAGACTACGATGGCGGAGA CTGTTGCGAATGCACGTGCGAGGTGGGAGAGTTCACCAATTATTATGGAT CGGACGGCCGCCACAACGGCTGCACCCAGTTTGCGTGCATCGACCCCTCC GCCTCGTGCGTCGACGACGACGACATCACCGTCGACATGCTCGCGGACTG CAGCTACGTAAGTCCATCTGCGTTGCTGCGTTGTGCTCTTCCCGCTCGAA TGCGTTCCAACTCCTTCGCCGGGGCCACAACAGCTTGATGAGTACATTAA TGCCATTTTCGTGAGAGCAACTAACTGCATCTGTGCTTGTCAAGACTAAA CAGGGCCTCTCTTCGCCGTCTGTGCCCTGCAGGTGTTGGGCATCGGTGAT GGATACTGCAATGCTGAGATGAACACACCAGAATGCAGTGAGTGCCCCAA TCGAGGAAGAGTCGTCGGGTCTGTGTGCTTGATGGTCTAGATTGAAGTCA GCGGGCCGTAGAACCGCCGTCCCTTCAGGATGCTTTCGGCGGTGTTGCAT CAGTCAACCATCGCTCTCCGGTTTTATGAATCCCGGGCATGCACTTTCTT AGCGTCGAGATTCGCCTACCAGTTGCAGCTTCTGTCAACACAAGATACCC CCTTAGCGAGATAGTCGGGGTCAATAACATGTCTCCAGGCGACCTCGCGT ACGGCGGGTTTCGGCGCGTGTCACTCATGCGGGGGTATCTGACAATTTAC GGGAAAATGCATTGTGGTATCCTTTCCGAAGCAGACGATGGTTGTGGTTA CAGCTTGTGTTTTCTATGTCCGATGGCATGCGCTCTTCTCTCAGGTGTTG CATTCTTGTGTGAAATGTACGCTTACACCCTTCCTGAACTGCGTTTGAAA GCCCTAAATACAATACCCGCTGACCAATATTGATATTCCGGAGTTTTTCC TTCCCGCCCCCCGCCCACACTCGCCGTTTGCCACGCTGCTACATCGACGA TGCCAAGAAAATTGATTTCTGGCTGACCGAACATGGAGCTGATTCGTTCT CTTCATCGCACTCTCCTCCCCCCCCCGTGTCTTGTCTGCGGTCTGCTCGT TCCTTGTAAAAAGACTATGATGGTGGTGACTGCTGCAGGTGCACGTGTCA G
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Coding sequence (CDS) from alignment at L-elsbetiae_contig7630:4572..8522+

>mRNA_L-elsbetiae_contig7630.16555.1 ID=mRNA_L-elsbetiae_contig7630.16555.1|Name=mRNA_L-elsbetiae_contig7630.16555.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2388bp|location=Sequence derived from alignment at L-elsbetiae_contig7630:4572..8522+ (Laminarionema elsbetiae ELsaHSoW15)
TTTTCCCCCTACATAGGCAACGGCTATTGCGATTCCGACAACAACAACGA
GCTCTGCGGATACGACGGTGGAGACTGCTGCGAGTGCACCTGCACGACCC
CTGATGGAGGCGGCGAGTCTTCCTACGGCTCTTGCACCGGCGGTTTCGCC
TGCATCGACCCGGCCGCGGCATGCGTGGACGATGACGATATCACCGCGGA
CATGGTCGAAAACTGCAGCTACGCCGAAAGCATCGTTTTCCCCCTACATA
GGCAACGGCTATTGCGATTCCGACAACAACAACGAGCTCTGCGGATACGA
CGGTGGAGACTGCTGCGAGTGCACCTGCACGACCCCTGATGGAGGCGGCG
AGTCTTCCTACGGCTCTTGCACCGGCGGTTTCGCCTGCATCGACCCGGCC
GCGGCATGCGTGGACGATGACGATATCACCGCGGACATGGTCGAAAACTG
CAGCTACGCCGAAAGCATCGGCGATGGTTATTGCCAGTCTGAAAATAACA
ACGAACTCTGTGGATACGACGGCGGAGACTGCTGCGAGTGTACGTGCACG
GTCCCTGACGGCAGCGAGGATTACTACGGGTGCACGGGCGGTTTCGCCTG
TATCGACCCGGCCGCGGCATGCGTGGACGATGATGACATCACCGCTGACA
TGTTCGAGTATTGCGGGTACATCGAAGGCGTCGGCGATGGTTATTGCCAG
TCTGAAAATAACAACGAACTCTGTGGATACGACGGCGGAGACTGCTGCGA
GTGTACGTGCACGGTCCCTGACGGCAGCGAGGATTACTACGGGTGCACGG
GCGGTTTCGCCTGTATCGACCCGGCCGCGGCATGCGTGGACGATGATGAC
ATCACCGCTGACATGTTCGAGTATTGCGGGTACATCGAAGGCGTCGGCAA
TGGTTCTTGCGACTCTGAGAACAACAACGAGCTCTGCAGATACGACGGCG
GAGACTGCTGCGAGTGCACGTGCACGGTTCCTGACGACGGCGACGATTTC
TACGGCTGCACGGGCGGTTTCGCCTGTATCGACCCGGCCGCGGCATGCGT
GGACGATGATGACATCACTGCTGACATGGTTGAAAACTGTGGCTCCGCCG
AGCGCATTGGCAATGGTTCTTGCGACTCTGAGAACAACAACGAGCTCTGC
AGATACGACGGCGGAGACTGCTGCGAGTGCACGTGCACGGTTCCTGACGA
CGGCGACGATTTCTACGGCTGCACGGGCGGTTTCGCCTGTATCGACCCGG
CCGCGGCATGCGTGGACGATGATGACATCACTGCTGACATGGTTGAAAAC
TGTGGCTCCGCCGAGCGCATTGGCAACGGTTATTGCGATCCTGAGAACAA
TATTGAACTGTGCGGATACGACGGCGGAGACTGCTGCGAGTGCACGTGCG
AGGTAGAGGAATCCGCCGATGACGGATCGGACGGTCGCCACAACGGCTGC
ACCCAGTTTGCGTGCATCGACCCCTCCGCCTCGTGCGTCGACGACGACGA
CATCACCGTCGACATGCTCGCGAACTGCAACTACGCAACGGTTATTGCGA
TCCTGAGAACAATATTGAACTGTGCGGATACGACGGCGGAGACTGCTGCG
AGTGCACGTGCGAGGTAGAGGAATCCGCCGATGACGGATCGGACGGTCGC
CACAACGGCTGCACCCAGTTTGCGTGCATCGACCCCTCCGCCTCGTGCGT
CGACGACGACGACATCACCGTCGACATGCTCGCGAACTGCAACTACGTTA
TCGGCGTCGGTGACGGATACTGCGAGGCCGAGATGAACACGCCAGAATGC
AGTTATCGGCGTCGGTGACGGATACTGCGAGGCCGAGATGAACACGCCAG
AATGCAACTACGATGGCGGAGACTGTTGCGAATGCACGTGCGAGGTGGGA
GAGTTCACCAATTATTATGGATCGGACGGCCGCCACAACGGCTGCACCCA
GTTTGCGTGCATCGACCCCTCCGCCTCGTGCGTCGACGACGACGACATCA
CCGTCGACATGCTCGCGGACTGCAGCTACACTACGATGGCGGAGACTGTT
GCGAATGCACGTGCGAGGTGGGAGAGTTCACCAATTATTATGGATCGGAC
GGCCGCCACAACGGCTGCACCCAGTTTGCGTGCATCGACCCCTCCGCCTC
GTGCGTCGACGACGACGACATCACCGTCGACATGCTCGCGGACTGCAGCT
ACGTGTTGGGCATCGGTGATGGATACTGCAATGCTGAGATGAACACACCA
GAATGCAGTGTTGGGCATCGGTGATGGATACTGCAATGCTGAGATGAACA
CACCAGAATGCAACTATGATGGTGGTGACTGCTGCAGGTGCACGTGTCAG
ACTATGATGGTGGTGACTGCTGCAGGTGCACGTGTCAG
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