mRNA_L-elsbetiae_contig7601.16521.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7601.16521.1 vs. uniprot
Match: D8LI97_ECTSI (Transmembrane protein 18 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI97_ECTSI) HSP 1 Score: 320 bits (819), Expect = 4.360e-106 Identity = 166/203 (81.77%), Postives = 180/203 (88.67%), Query Frame = 1 Query: 1 MASAAEDVGDRASDSLGEGDTADKLEQHGEAFTGFLGDVQASLLTQLNAQSVGPEGFVENFQAFRSAVDWSEPWIQGILVFHLSLWLFFIVTRKSFGAQVGLFTVILGGTRSSELINTFLRDRWHEFSRQNYFDEHGIFMGVMWAGPLLLLGFTMLVNLLCQAASLLVAVKTQQFKREIAAKKEGGKSKAKRGLKDKKASKQA 609 MA+ AE V ++ LGE A+K EQHG+AFTGFLGDVQA+LL+QLNA SVGPEGFVENFQAFRSAVDWSEPWIQGILVFHL LW+FFIVTR+SFGAQVGLF V+L GTR SE INT LRDRW FSRQNYFDEHGIFMGVMWAGPLL+LGFTMLV+LLCQ ASLLV VKT+QFKREIAAKK+GGKSKAKRG KDKKASKQA Sbjct: 1 MATVAEKVDQAIAEGLGEEALAEKFEQHGDAFTGFLGDVQANLLSQLNAHSVGPEGFVENFQAFRSAVDWSEPWIQGILVFHLLLWVFFIVTRRSFGAQVGLFAVVLTGTRLSEFINTCLRDRWQNFSRQNYFDEHGIFMGVMWAGPLLILGFTMLVSLLCQTASLLVTVKTKQFKREIAAKKDGGKSKAKRGAKDKKASKQA 203
BLAST of mRNA_L-elsbetiae_contig7601.16521.1 vs. uniprot
Match: A0A835ZFQ2_9STRA (Transmembrane protein 18 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFQ2_9STRA) HSP 1 Score: 132 bits (332), Expect = 1.200e-33 Identity = 68/149 (45.64%), Postives = 97/149 (65.10%), Query Frame = 1 Query: 103 FLGDVQASLLTQLNAQSVGPEGFVENFQAFRSAVDWSEPWIQGILVFHLSLWLFFIVTRKSFGAQVGLFTVILGGTRSSELINTFLRDRWHEFSRQNYFDEHGIFMGVMWAGPLLLLGFTMLVNLLCQAASLLVAVKTQQFKREIAAKK 549 F+ ++A++L Q GP+GF+EN QAF +AVDWSE WIQ IL FH+++ +++R Q+ LF I R +E N + RW +F+RQNYFDE G+F+GV+W PLLL+ ML+ + ++A LLV VK Q +REIAA+K Sbjct: 12 FIASLEANML-QAAKSGPGPQGFIENCQAFCAAVDWSETWIQAILCFHVAVAAAALLSRNRLNCQIALFLSICALVRGAEWANAYAARRWRDFARQNYFDERGVFVGVVWCAPLLLVLLGMLLGFVVRSARLLVTVKRAQLRREIAARK 159
BLAST of mRNA_L-elsbetiae_contig7601.16521.1 vs. uniprot
Match: A0A7S2Y0G5_9STRA (Transmembrane protein 18 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0G5_9STRA) HSP 1 Score: 134 bits (337), Expect = 1.220e-33 Identity = 69/157 (43.95%), Postives = 99/157 (63.06%), Query Frame = 1 Query: 103 FLGDVQASLLTQLNAQSVGPEGFVENFQAFRSAVDWSEPWIQGILVFHLSLWLFFIVTRKSFGAQVGLFTVILGGTRSSELINTFLRDRWHEFSRQNYFDEHGIFMGVMWAGPLLLLGFTMLVNLLCQAASLLVAVKTQQFKREIAAKKEGGKSKAK 573 + ++ +L GPEGF EN +AF++AV+W E WIQGIL FH+ +++ +V RK+F QV +F +I+G SE INT ++ W EFS Q+YFD +G+FM VM+AGPLLL+GF L N L +A LLV VK + K+ + K + +K Sbjct: 52 MIASLEDQVLQMARESGAGPEGFWENVEAFKAAVNWEERWIQGILAFHVIVFVLMLVFRKNFNVQVCIFLLIVGLVSCSETINTLGQNHWQEFSTQDYFDPNGLFMMVMFAGPLLLIGFLQLFNFLLISADLLVKVKRAELKKHMREKNDASAQSSK 208
BLAST of mRNA_L-elsbetiae_contig7601.16521.1 vs. uniprot
Match: A0A7S4A3H0_9STRA (Transmembrane protein 18 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A3H0_9STRA) HSP 1 Score: 124 bits (311), Expect = 5.670e-30 Identity = 72/168 (42.86%), Postives = 97/168 (57.74%), Query Frame = 1 Query: 64 ADKLEQHGEAFTGFLGDVQASLLTQLNAQSV--GPEGFVENFQAFRSAVDWSEPWIQGILVFHLSLWLFFIVTRKSFGAQVGLFTVILGGTRSSELINTFLRDRWHEFSRQNYFDEHGIFMGVMWAGPLLLLGFTMLVNLLCQAASLLVAVKTQQFK---REIAAKKE 552 AD ++ L DV L Q+ A V P+ F E AF +AVDW E WI+ +L++HLSLW+ F+ TRK+F Q GLF I +E +N RW +F+ QNYFDE G+F G+M PLL L F ML+N L A+S+LV VK +F+ RE+ A+ E Sbjct: 17 ADDVDNENATAASSLNDVVEGLKDQIFADHVKGAPQTFREECAAFIAAVDWRENWIRCLLLWHLSLWVLFVFTRKNFPVQCGLFFGIAACVALAETLNGLCAKRWEKFATQNYFDERGVFAGIMLCAPLLALAFAMLLNFLVMASSMLVTVKRAEFRGKARELGAQAE 184
BLAST of mRNA_L-elsbetiae_contig7601.16521.1 vs. uniprot
Match: A0A7S2SGF8_9STRA (Transmembrane protein 18 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SGF8_9STRA) HSP 1 Score: 117 bits (294), Expect = 7.210e-28 Identity = 58/144 (40.28%), Postives = 88/144 (61.11%), Query Frame = 1 Query: 103 FLGDVQASLLTQLNAQSVGPEGFVENFQAFRSAVDWSEPWIQGILVFHLSLWLFFIVTRKSFGAQVGLFTVILGGTRSSELINTFLRDRWHEFSRQNYFDEHGIFMGVMWAGPLLLLGFTMLVNLLCQAASLLVAVKTQQFKRE 534 + +Q + T P G +++ QAF +AVDWSE WIQ +L FH++LW+ + TR+ Q G F + G S+E +NT+ W +FS+Q+YF +G F+GVM+A PLL L ++N LC AA+LLV VK ++ +R+ Sbjct: 30 IIESLQEQVYTMAREAGNAPSGLLDDIQAFTAAVDWSERWIQALLGFHVALWMITLWTRRYIWWQCGTFFAVCGLVWSAEPMNTWAAAHWQDFSKQDYFQPNGFFVGVMYAAPLLALAMFQMINFLCIAANLLVEVKRKELRRK 173
BLAST of mRNA_L-elsbetiae_contig7601.16521.1 vs. uniprot
Match: A0A7S2CTX0_9STRA (Transmembrane protein 18 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CTX0_9STRA) HSP 1 Score: 114 bits (284), Expect = 1.990e-26 Identity = 60/149 (40.27%), Postives = 88/149 (59.06%), Query Frame = 1 Query: 103 FLGDVQASLLTQLNAQSVGPEGFVENFQAFRSAVDWSEPWIQGILVFHLSLWLFFIVTRKSFGAQVGLFTVILGGTRSSELINTFLRDRWHEFSRQNYFDEHGIFMGVMWAGPLLLLGFTMLVNLLCQAASLLVAVKTQQFKREIAAKK 549 F+G ++ + P+ F E+ QAF +AVDW+E WIQG+L+ H LW+ + R+ F QV +F ++ SSE IN+ RW FS Q+YFD G F+ VM+AGPLL L ++N L +A++LV VK + K +A+KK Sbjct: 29 FIGGLEEQVYAMAREAGNAPKNFTEDVQAFIAAVDWNEKWIQGLLLGHFLLWVITLGFRRRFYLQVFIFFMVCAMVWSSEHINSAAHVRWQSFSTQDYFDPSGFFISVMFAGPLLALALFQMINFLIISANMLVEVKRNELKTNLASKK 177
BLAST of mRNA_L-elsbetiae_contig7601.16521.1 vs. uniprot
Match: A0A837A383_9ROSI (Transmembrane protein 18 n=4 Tax=Salix TaxID=40685 RepID=A0A837A383_9ROSI) HSP 1 Score: 110 bits (276), Expect = 1.760e-25 Identity = 57/151 (37.75%), Postives = 86/151 (56.95%), Query Frame = 1 Query: 112 DVQASLLTQLNAQ-SVGPEGFVENFQAFRSAVDWSEPWIQGILVFHLSLWLFFIVTRKSFGAQVGLFTVILGGTRSSELINTFLRDRWHEFSRQNYFDEHGIFMGVMWAGPLLLLGFTMLVNLLCQAASLLVAVKTQQFKREIAAKKEGGK 561 D A L+ +L+++ G + ++NF F A+DW EPWI G+ FHL L + IV+RK Q+ LF + L G SE +N L D W F+ QNYFD HG+F+ V+W+GPLL++ +L+N L ++V K + + +E K Sbjct: 13 DQMADLVQKLSSELRSGIKPSIDNFVGFFHAIDWKEPWIMGLTGFHLLLLILTIVSRKHINFQMSLFLLALAGVYLSERLNRVLSDNWRSFASQNYFDPHGVFLSVLWSGPLLIIAIIILINTLFSLCYMIVRWKRAELRHRARLARESNK 163
BLAST of mRNA_L-elsbetiae_contig7601.16521.1 vs. uniprot
Match: U5FW19_POPTR (Transmembrane protein 18 n=8 Tax=Populus TaxID=3689 RepID=U5FW19_POPTR) HSP 1 Score: 109 bits (272), Expect = 6.600e-25 Identity = 55/151 (36.42%), Postives = 87/151 (57.62%), Query Frame = 1 Query: 112 DVQASLLTQLNAQ-SVGPEGFVENFQAFRSAVDWSEPWIQGILVFHLSLWLFFIVTRKSFGAQVGLFTVILGGTRSSELINTFLRDRWHEFSRQNYFDEHGIFMGVMWAGPLLLLGFTMLVNLLCQAASLLVAVKTQQFKREIAAKKEGGK 561 D A L+ +L+++ G ++NF F A+DW+EPW+ G++ FHL+L + +V+RK Q+ F V L G SE +N L D W F+ QNYFD HG+F+ V+W+GPLL++ +L+N L ++V K + + +E K Sbjct: 13 DQMADLVQKLSSELRSGFRPAIDNFIGFFHAIDWTEPWLMGLIGFHLALLILTVVSRKHINFQMSFFLVALAGVYLSERLNRVLGDNWRSFASQNYFDPHGLFLSVLWSGPLLIIATIILINTLFSLCFMIVRWKRAELRHRARLARESNK 163
BLAST of mRNA_L-elsbetiae_contig7601.16521.1 vs. uniprot
Match: A0A5N6P3C3_9ASTR (Transmembrane protein 18 n=2 Tax=Asteraceae TaxID=4210 RepID=A0A5N6P3C3_9ASTR) HSP 1 Score: 108 bits (269), Expect = 1.680e-24 Identity = 51/125 (40.80%), Postives = 77/125 (61.60%), Query Frame = 1 Query: 154 VGPEGFVENFQAFRSAVDWSEPWIQGILVFHLSLWLFFIVTRKSFGAQVGLFTVILGGTRSSELINTFLRDRWHEFSRQNYFDEHGIFMGVMWAGPLLLLGFTMLVNLLCQAASLLVAVKTQQFK 528 +G + ++NF F A+DW EPW+ G++VFHL + + I +RK+ Q+ LF + L G +E +NT L + W F+ QNYFD HG+F+ V+W+GPLL+ +LVN L L+V K + K Sbjct: 28 IGMQPAMDNFIGFFHAIDWKEPWLVGLMVFHLVVLIIIITSRKNINFQMYLFLLSLAGVYLAERLNTVLSNNWKSFAGQNYFDRHGVFLSVLWSGPLLVFATIILVNTLFSLCHLIVKWKRAELK 152
BLAST of mRNA_L-elsbetiae_contig7601.16521.1 vs. uniprot
Match: A0A2G5CNM2_AQUCA (Transmembrane protein 18 n=3 Tax=Thalictroideae TaxID=1463137 RepID=A0A2G5CNM2_AQUCA) HSP 1 Score: 108 bits (269), Expect = 1.820e-24 Identity = 53/140 (37.86%), Postives = 84/140 (60.00%), Query Frame = 1 Query: 112 DVQASLLTQLNAQ-SVGPEGFVENFQAFRSAVDWSEPWIQGILVFHLSLWLFFIVTRKSFGAQVGLFTVILGGTRSSELINTFLRDRWHEFSRQNYFDEHGIFMGVMWAGPLLLLGFTMLVNLLCQAASLLVAVKTQQFK 528 D A L+ + A+ G + V+NF+ F A++W EPW+ G++ FH+SL L +++RK+ Q+ LF + L G +E +NT L W F+ QNYFD HG+F+ V+W+GPLL + +L+N L L+V K + + Sbjct: 17 DQMADLVEKFTAELRTGFQPAVDNFKGFFHAINWKEPWLIGLISFHVSLLLIIVISRKNVNFQMLLFLMALAGVYFAEKMNTVLHSNWESFAGQNYFDAHGVFVSVLWSGPLLCMSILILMNTLFSLCQLIVRWKKAELR 156 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7601.16521.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7601.16521.1 >prot_L-elsbetiae_contig7601.16521.1 ID=prot_L-elsbetiae_contig7601.16521.1|Name=mRNA_L-elsbetiae_contig7601.16521.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=204bp MASAAEDVGDRASDSLGEGDTADKLEQHGEAFTGFLGDVQASLLTQLNAQback to top mRNA from alignment at L-elsbetiae_contig7601:4613..7095- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7601.16521.1 ID=mRNA_L-elsbetiae_contig7601.16521.1|Name=mRNA_L-elsbetiae_contig7601.16521.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2483bp|location=Sequence derived from alignment at L-elsbetiae_contig7601:4613..7095- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7601:4613..7095- >mRNA_L-elsbetiae_contig7601.16521.1 ID=mRNA_L-elsbetiae_contig7601.16521.1|Name=mRNA_L-elsbetiae_contig7601.16521.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1224bp|location=Sequence derived from alignment at L-elsbetiae_contig7601:4613..7095- (Laminarionema elsbetiae ELsaHSoW15)back to top |