mRNA_L-elsbetiae_contig759.16497.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig759.16497.1 vs. uniprot
Match: D7FH27_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH27_ECTSI) HSP 1 Score: 338 bits (868), Expect = 2.460e-112 Identity = 190/274 (69.34%), Postives = 214/274 (78.10%), Query Frame = 1 Query: 37 MPLVHQKRVATALAFLVCFAARPIADGFLLSPALSI--VRSTTNKGLRLQRPDTLLEVRP------EVLEVEVEDEPQLLSAEKLVNRRAYFEQLLYKTVATVAVSGASSLIAPPRRVSAAGLGYEEPGSRWQPEGNPKEAASWFPLLKKCYESLEDVVANWEKYTVRQDGDAIRRLIGTIGVSSPLSSIRKAFTSIRDAEEESQGNIDVIEYVEAYMEVLTALGDAENDLYSANFADYSGGGGTKGSQFITKAEKSLKIAKDEFKVVNQILGI 834 M LV Q RV + +C A P DGFLLSP+L++ +RS N G D + +P +VLE + ++ P+ L+ E +NRRAYFEQL+YK+VATVA+SGASSL+ P S A +EE SRWQPEGNPKEAASWFPLL KCY+SLEDV+ NWEKYT RQDGDAIRRLIGTIGVSSPLSSIRKAFTSIRDAEE SQG+IDVIEYVEAYMEVLTALGDAENDLYSANFADYSGGGGTKGSQFI KA KSLKIAKDEFK VN+ILGI Sbjct: 1 MTLVRQNRVVATIFAFLCLAV-PSCDGFLLSPSLALARLRSAPNDG------DCAIARQPGGAASQQVLE-KPDEMPRTLAEEPRLNRRAYFEQLMYKSVATVAISGASSLVLAPTGRSYA---FEEQASRWQPEGNPKEAASWFPLLAKCYQSLEDVLENWEKYTARQDGDAIRRLIGTIGVSSPLSSIRKAFTSIRDAEEASQGDIDVIEYVEAYMEVLTALGDAENDLYSANFADYSGGGGTKGSQFIAKANKSLKIAKDEFKEVNKILGI 263
BLAST of mRNA_L-elsbetiae_contig759.16497.1 vs. uniprot
Match: A0A835ZH00_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH00_9STRA) HSP 1 Score: 158 bits (400), Expect = 1.600e-43 Identity = 80/145 (55.17%), Postives = 108/145 (74.48%), Query Frame = 1 Query: 406 WQPEGNPKEAASWFPLLKKCYESLEDVVANWEKYTVR--QDGDAIRRLIGTIGVSSPLSSIRKAFTSIRDAEEESQGNIDVIEYVEAYMEVLTALGDAENDLYSANFADYSGGGGTKGSQFITKAEKSLKIAKDEFKVVNQILGI 834 W P G+PK AASWFPLLK Y +L+D++ANW+ DGDA+RR IGT+GVSSPLS+++K F++IRD+E+ ++ ID+ ++VEAY VLT L DAENDLYSANFAD+SGGG KG+ FI A+KS+ AK F+ + + L + Sbjct: 14 WGPTGDPKVAASWFPLLKLQYAALKDLLANWDAVAPAGSTDGDAVRRKIGTVGVSSPLSAVKKTFSAIRDSEDVAE-EIDLADFVEAYQAVLTDLSDAENDLYSANFADFSGGGQLKGTNFIKAAKKSIAAAKLNFEEILRTLQL 157
BLAST of mRNA_L-elsbetiae_contig759.16497.1 vs. uniprot
Match: A0A7S2UXU3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXU3_9STRA) HSP 1 Score: 130 bits (328), Expect = 5.870e-32 Identity = 69/164 (42.07%), Postives = 102/164 (62.20%), Query Frame = 1 Query: 340 SLIAPPRRVSAAGLGYEEPGSRWQPEGNPKEAASWFPLLKKCYESLEDVVANWEKYTVRQDGDAIRRLIGTIGVSSPLSSIRKAFTSIRDAEEESQGNIDVIEYVEAYMEVLTALGDAENDLYSANFADYSGGGGTKGSQFITKAEKSLKIAKDEFKVVNQILG 831 +LI+ + +A +GY W+ GNPK +W P ++ Y+ LE +V NW++ + +GD +RR +GT+GVSS L+S +KA +RDA + + D IE+ E EV+T LGDAEND YSANFA++SGGG K +QFI KA +K A +K+V ++ Sbjct: 77 TLISSATLLPSASIGYPPYPQAWKTSGNPKSYKTWAPQVRDGYKRLEIMVENWDEIAAKDNGDEMRRFLGTVGVSSSLTSFKKALYGVRDAVD-LPSSFDEIEWAEKAEEVVTCLGDAENDFYSANFAEFSGGGQLKSAQFIKKARPFVKKA---YKIVGGMVA 236
BLAST of mRNA_L-elsbetiae_contig759.16497.1 vs. uniprot
Match: A0A7S4DIQ5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DIQ5_HETAK) HSP 1 Score: 109 bits (273), Expect = 3.540e-24 Identity = 56/141 (39.72%), Postives = 90/141 (63.83%), Query Frame = 1 Query: 418 GNPKEAASWFPLLKKCYESLEDVVANWEKYTVRQDGDAIRRLIGTIGVSSPLS--SIRKAFTSIRDAEEESQGNIDVIEYVEAYMEVLTALGDAENDLYSANFADYSGGGGTKGSQFITKAEKSLKIAKDEFKVVNQILGI 834 G P ++W L++ + L +V+ NW+ +R +GD +R+ IGT+G S L+ S+++AF + +A++ +D+ EY E Y EVLTAL DAEN+ YSANFAD+SGGG K SQFI +++K + +A+ K + + + Sbjct: 95 GPPASFSTWLAQLEEGEKILVNVLQNWKDLELRDNGDEVRKFIGTVGPVSALNPVSLKRAFLKLAEADD-FPDYVDLDEYAEKYEEVLTALADAENEAYSANFADFSGGGQLKSSQFIKRSQKRIAVAQRALKEILAMFDV 234
BLAST of mRNA_L-elsbetiae_contig759.16497.1 vs. uniprot
Match: A0A2V3IQN4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQN4_9FLOR) HSP 1 Score: 65.9 bits (159), Expect = 2.700e-9 Identity = 33/104 (31.73%), Postives = 61/104 (58.65%), Query Frame = 1 Query: 418 GNPKEAASWFPLLKKCYESLEDVVANWEKYTVRQDGDAIRRLIGTIGVSSPLSSIRKAFTSIRDAEEESQGNIDVIEYVEA-YMEVLTALGDAENDLYSANFAD 726 G+PK+ ++ P ++ Y++L + +WE T DGD +RR++GT+GV SPL +IRK ++ + ++IE +E + +V+ + + LYSA+F + Sbjct: 14 GDPKKLETYLPQIEAGYQALLGLDRDWEAKTKDFDGDVVRRVLGTVGVKSPLFNIRKPLLKSWQIVADTSTDDELIERLETEWNDVINGISSIDFQLYSASFTE 117
BLAST of mRNA_L-elsbetiae_contig759.16497.1 vs. uniprot
Match: A0A5J4Z903_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z903_PORPP) HSP 1 Score: 62.4 bits (150), Expect = 1.620e-7 Identity = 33/89 (37.08%), Postives = 52/89 (58.43%), Query Frame = 1 Query: 466 YESLEDVVANWEKYTVRQDGDAIRRLIGTIGVSSPLSSIRKAFTSIRDA--EEESQGNIDVIEYVEAYMEVLTALGDAENDLYSANFAD 726 Y+ + D+ NW + T DGD +RR +GT+G SSPL +I+KAF ++ + E + + D+ E E Y VL + + LYS NF++ Sbjct: 104 YDVMLDLERNWTERTKAFDGDIVRRYLGTVGKSSPLFNIKKAFMAVWKSLSERDDVSDADLEELNEKYNLVLDGISGVDFQLYSVNFSE 192
BLAST of mRNA_L-elsbetiae_contig759.16497.1 vs. uniprot
Match: A0A813JFT0_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813JFT0_POLGL) HSP 1 Score: 59.7 bits (143), Expect = 2.100e-6 Identity = 36/95 (37.89%), Postives = 55/95 (57.89%), Query Frame = 1 Query: 451 LLKKCYESLEDVVANWEKYTVRQDGDAIRRLIGTIGVSSPLSSIRKAFTSIRDAEEESQGNIDVIEYVEAYMEVLTALGDAENDLYSANFADYSG 735 +L + +L D + NW + V DGD+IRR++GT+G +SP+ ++ +A S+ + N D++E EA V L A+ YSANFAD SG Sbjct: 124 ILSRSEAALADALKNWSR--VAADGDSIRRVLGTVGATSPVYALPRAMRSL------TAENFDILEQTEA---VEFHLRQADFLAYSANFADSSG 207
BLAST of mRNA_L-elsbetiae_contig759.16497.1 vs. uniprot
Match: A0A7S2RCQ0_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RCQ0_9STRA) HSP 1 Score: 54.7 bits (130), Expect = 7.280e-5 Identity = 48/151 (31.79%), Postives = 72/151 (47.68%), Query Frame = 1 Query: 292 QLLYKTVATVAVSGASSLIAPPRRVSAAGLGYEEPGSRWQPEGNPKEAASWFPLLKKCYESLEDVVANW--EKYTVRQDG-DAIRRLIGTIGVSSPLSSIRKAFTSIRDAEEESQGNIDVIEYVEAYMEVLTALGDAENDLYSANFADYSG 735 Q L++T +S++ P + +AA G +R Q W K+ L+D++ NW EK+ G DAIRR +GT G++SPL I KAF ++RD+E D IE+ E E + L A++ S+N SG Sbjct: 74 QFLFQTTKMATTVATASVMLPHQACNAAAPGMTAESARGQ----------W----KQASTVLDDLLQNWSTEKWAEEVGGGDAIRRELGTQGITSPLYQIEKAFKALRDSEYVD----DFIEFQETTEEFMDGLFRADSLAASSNNKTGSG 206 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig759.16497.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig759.16497.1 >prot_L-elsbetiae_contig759.16497.1 ID=prot_L-elsbetiae_contig759.16497.1|Name=mRNA_L-elsbetiae_contig759.16497.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=267bp MPLVHQKRVATALAFLVCFAARPIADGFLLSPALSIVRSTTNKGLRLQRPback to top mRNA from alignment at L-elsbetiae_contig759:2659..7110+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig759.16497.1 ID=mRNA_L-elsbetiae_contig759.16497.1|Name=mRNA_L-elsbetiae_contig759.16497.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4452bp|location=Sequence derived from alignment at L-elsbetiae_contig759:2659..7110+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig759:2659..7110+ >mRNA_L-elsbetiae_contig759.16497.1 ID=mRNA_L-elsbetiae_contig759.16497.1|Name=mRNA_L-elsbetiae_contig759.16497.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1602bp|location=Sequence derived from alignment at L-elsbetiae_contig759:2659..7110+ (Laminarionema elsbetiae ELsaHSoW15)back to top |