mRNA_L-elsbetiae_contig7588.16495.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7588.16495.1 vs. uniprot
Match: A0A6H5KQX8_9PHAE (UBA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQX8_9PHAE) HSP 1 Score: 271 bits (693), Expect = 3.000e-80 Identity = 168/220 (76.36%), Postives = 174/220 (79.09%), Query Frame = 1 Query: 1 YREYHLELTKEIQFPIEMSFPWIITEHIVKTKKAMALGSASGPRGGGDGSAHGGSVDVSEGGXXXXXXGGDLDGSLTPYGSKKGKXXXXXXXXXX-MGHVLVEEVLWALDVYNDAAHRALYVLNSQYLFNEIQAEVNLVFNQLLFDLEAEVFGYFKDWAASTVLDKTFKRVYEIRRGWGHFIPGRRRYETPVQQRHVQLLGRSVDLTRRISGAMNRKIIE 657 YREYHLELTKEIQFPIEMSFPWIITEHIVKTK+AMA+GSA XXXXXX XXXXXXXXXX MGHVLVEEVLWALD+YNDAAHRALYVLNSQYLFNEIQAEVNLVF QLLFDLEAEVFGYFKDWAASTVLDK FK+VYEIRRG GHFIPGRRRYETPVQQRHVQLLGRSVDL+ R+SGAMN KI E Sbjct: 346 YREYHLELTKEIQFPIEMSFPWIITEHIVKTKRAMAIGSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGHVLVEEVLWALDLYNDAAHRALYVLNSQYLFNEIQAEVNLVFKQLLFDLEAEVFGYFKDWAASTVLDKAFKKVYEIRRGLGHFIPGRRRYETPVQQRHVQLLGRSVDLSHRVSGAMNVKIGE 565
BLAST of mRNA_L-elsbetiae_contig7588.16495.1 vs. uniprot
Match: D7G6Y8_ECTSI (UBA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6Y8_ECTSI) HSP 1 Score: 271 bits (692), Expect = 4.060e-80 Identity = 169/224 (75.45%), Postives = 174/224 (77.68%), Query Frame = 1 Query: 1 YREYHLELTKEIQFPIEMSFPWIITEHIVKTKKAMALGSASGPRGGGDGSAHGGSVDVSEGGXXXXXXGGDLDGSLTPYGSKKGKXXXXXXXXXX-----MGHVLVEEVLWALDVYNDAAHRALYVLNSQYLFNEIQAEVNLVFNQLLFDLEAEVFGYFKDWAASTVLDKTFKRVYEIRRGWGHFIPGRRRYETPVQQRHVQLLGRSVDLTRRISGAMNRKIIE 657 YREYHLELTKEIQFPIEMSFPWIITEHIVKTK+AMA+GSA XXXXXX XXXXXXXXXX MGHVLVEEVLWALDVYNDAAHRALYVLNSQYLFNEIQAEVNLVF QLLFDLEAEVFGYFKDWAASTVLDK FK+VYEIRRG GHFIPGRRRYETPVQQRHVQLLGRSVDL+ R+SGAMN KI E Sbjct: 636 YREYHLELTKEIQFPIEMSFPWIITEHIVKTKRAMAIGSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSGGEMGHVLVEEVLWALDVYNDAAHRALYVLNSQYLFNEIQAEVNLVFKQLLFDLEAEVFGYFKDWAASTVLDKAFKKVYEIRRGLGHFIPGRRRYETPVQQRHVQLLGRSVDLSHRVSGAMNVKIGE 859
BLAST of mRNA_L-elsbetiae_contig7588.16495.1 vs. uniprot
Match: A0A7S2F5C9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F5C9_9STRA) HSP 1 Score: 140 bits (353), Expect = 1.190e-34 Identity = 81/217 (37.33%), Postives = 121/217 (55.76%), Query Frame = 1 Query: 1 YREYHLELTKEIQFPIEMSFPWIITEHIVKTKKAMALGSASGPRGGGDGSAHGGSVDVSEGGXXXXXXGGDLDGSLTPYGSKKGKXXXXXXXXXXMGHVLVEEVLWALDVYNDAAHRALYVLNSQYLFNEIQAEVNLVFNQLLFDLEAEVFGYFKDWAASTVLDKTFKRVYEIRRGWGHFIPGRRRYETPVQQRHVQLLGRSVDLTRRISGAMNRKI 651 YRE++LE+T+++QFPIE S PWI+TEHI+K + DL LVE++++ LD+YNDAAHRAL+VLN Q+L++EI+AEVNLVF+QL+F + E++ Y+K+ +A +LD + K+ + RR + + +RRYE P+ QRH+QLLGR+VDL I +N+K+ Sbjct: 168 YREFYLEITQQVQFPIEASLPWILTEHIIKNQSN------------------------------------DLP--------------------------LVEKLIFILDLYNDAAHRALFVLNQQFLYDEIEAEVNLVFDQLIFLMADEMYTYYKNLSAVALLDNSLKQFEQDRRSSRYLVVSKRRYEIPLGQRHIQLLGRTVDLHFLIGQHLNQKL 322
BLAST of mRNA_L-elsbetiae_contig7588.16495.1 vs. uniprot
Match: A0A7S1UBW1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UBW1_9STRA) HSP 1 Score: 135 bits (341), Expect = 4.030e-33 Identity = 88/224 (39.29%), Postives = 116/224 (51.79%), Query Frame = 1 Query: 1 YREYHLELTKEIQFPIEMSFPWIITEHIVKTKKAMALGSASGPRGGGDGSAHGGSVDVSEGGXXXXXXGGDLDGSLTPYGSKKGKXXXXXXXXXXMGHVLVEEVLWALDVYNDAAHRALYVLNSQYLFNEIQAEVNLVFNQLLFDLEAEVFGYFKDWAASTVLDKTFKRVYEIRRGWGHFIPGRRRYETPVQQRHVQLLGRSVDLTRRISGAMNR---KIIEAS 663 YRE+ LELT +QFPIEMS PWI+ EH++K++ S P LVE++ + LDVYNDAAHRALYVLN QYL++EI+AEVNLVF+Q++F + E+ FKD AA+ +++ +K E R F ++RY+ P+ QRHVQLLGRSVDL I+ MN K IE S Sbjct: 62 YREFFLELTGRVQFPIEMSLPWILVEHVIKSQS-----------------------------------------SAIP---------------------LVEKIFFTLDVYNDAAHRALYVLNRQYLYDEIEAEVNLVFDQMIFLIADEMLKCFKDQAATNRMNRDYKVHLERVRSGDSFHTLKKRYDIPISQRHVQLLGRSVDLNFLIAQHMNNMMYKDIETS 223
BLAST of mRNA_L-elsbetiae_contig7588.16495.1 vs. uniprot
Match: A0A835YVZ9_9STRA (Cytoplasmic fragile-X interacting family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVZ9_9STRA) HSP 1 Score: 134 bits (337), Expect = 1.780e-32 Identity = 96/224 (42.86%), Postives = 131/224 (58.48%), Query Frame = 1 Query: 1 YREYHLELTKEIQFPIEMSFPWIITEHIVKTK-KAMALGSASGPRGGGD-GSAHGGSVDVSEGGXXXXXXGGDLDGSLTPYGSKKGKXXXXXXXXXXMGHVLVEEVLWALDVYNDAAHRALYVLNSQYLFNEIQAEVNLVFNQLLFDLEAEVFGYFKDWAAST---VLDKTFKRVYEIRRGWGHFIPGRRRYETPVQQRHVQLLGRSVDLTRRISGAMNRKIIE 657 +REYHLE+T+ IQFP+E SFPWI+TEH+V + K+ + A+GP D S XXXXXX XXXX G L E VL ALDVYNDAA AL+ +Q+LF+E+QAEV++ ++QL+F LE+E++G+ K LDK ++R E RRGWG + P RR+ +QRH LLGRSVD++RR + ++ K+ E Sbjct: 699 FREYHLEITQSIQFPLEQSFPWILTEHMVSSSGKSTSAARAAGPSSPADFNSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAGAGPEGAALAEAVLCALDVYNDAARAALHTYCAQHLFDEVQAEVSVAYDQLVFQLESEIYGHCKASGFGLELGALDKMYRRRMEERRGWGRYTPAWRRHGALARQRHALLLGRSVDISRRFALDLDSKLRE 922
BLAST of mRNA_L-elsbetiae_contig7588.16495.1 vs. uniprot
Match: F0YNJ9_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YNJ9_AURAN) HSP 1 Score: 126 bits (317), Expect = 2.150e-30 Identity = 76/217 (35.02%), Postives = 117/217 (53.92%), Query Frame = 1 Query: 1 YREYHLELTKEIQFPIEMSFPWIITEHIVKTKKAMALGSASGPRGGGDGSAHGGSVDVSEGGXXXXXXGGDLDGSLTPYGSKKGKXXXXXXXXXXMGHVLVEEVLWALDVYNDAAHRALYVLNSQYLFNEIQAEVNLVFNQLLFDLEAEVFGYFKDWAASTVLDKTFK-RVYEIRRGWGHFIPGRRRYETPVQQRHVQLLGRSVDLTRRISGAMNRK 648 YRE++LEL+ +IQF IE+SFPWI+TEH++ T +A ++ LVE +L+ +DVYNDAAHR+LYVL+ ++L++EI+AEVNLVF+QL+F + V+ Y+KD S +D ++ R++ +RR + +P RR + P+ QRH+Q+LGR +DL I+ +N K Sbjct: 166 YREFYLELSGQIQFAIELSFPWILTEHVI-TNQAKSM-------------------------------------------------------------PLVENILYTMDVYNDAAHRSLYVLSQRFLYDEIEAEVNLVFDQLIFLISDHVYSYYKDNIGSRTIDGPYRERLFLMRRAYSLDVPARR-CDVPMSQRHIQVLGRVIDLNLLITQHVNGK 319
BLAST of mRNA_L-elsbetiae_contig7588.16495.1 vs. uniprot
Match: A0A443RRI8_9ACAR (Cytoplasmic FMR1-interacting protein-like isoform X1 (Fragment) n=1 Tax=Dinothrombium tinctorium TaxID=1965070 RepID=A0A443RRI8_9ACAR) HSP 1 Score: 125 bits (315), Expect = 1.500e-29 Identity = 81/226 (35.84%), Postives = 117/226 (51.77%), Query Frame = 1 Query: 1 YREYHLELT--KEIQFPIEMSFPWIITEHIVKTKKAMALGSASGPRGGGDGSAHGGSVDVSEGGXXXXXXGGDLDGSLTPYGSKKGKXXXXXXXXXXMGHVLVEEVLWALDVYNDAAHRALYVLNSQYLFNEIQAEVNLVFNQLLFDLEAEVFGYFKDWAASTVLDKTFK---RVYEIRRGWGHFIPGRRRYETPVQQRHVQLLGRSVDLTR----RISGAMNRKI 651 YRE++LE+T K IQFPIEMS PWI+T+HI+KTK A ++E VL+ LD+YND+AH AL + QYL++E++AEVNL F+Q ++ L ++F Y+K AAS +LDK F+ + + I+ W P RYET ++QRH+QLLGR++DL R R++ AMN+ + Sbjct: 675 YREFYLEMTMGKRIQFPIEMSLPWILTDHILKTKDAS----------------------------------------------------------------MMECVLYPLDLYNDSAHYALTKFSKQYLYDEVEAEVNLCFDQFVYKLSEQIFAYYKHIAASNLLDKRFRSEAQQHNIKFSW----PQANRYETLLRQRHLQLLGRTIDLNRLIAQRLNVAMNKSL 832
BLAST of mRNA_L-elsbetiae_contig7588.16495.1 vs. uniprot
Match: T1KBJ9_TETUR (Cytoplasmic FMR1-interacting protein n=2 Tax=Tetranychus urticae TaxID=32264 RepID=T1KBJ9_TETUR) HSP 1 Score: 125 bits (314), Expect = 2.030e-29 Identity = 78/225 (34.67%), Postives = 115/225 (51.11%), Query Frame = 1 Query: 1 YREYHLELT--KEIQFPIEMSFPWIITEHIVKTKKAMALGSASGPRGGGDGSAHGGSVDVSEGGXXXXXXGGDLDGSLTPYGSKKGKXXXXXXXXXXMGHVLVEEVLWALDVYNDAAHRALYVLNSQYLFNEIQAEVNLVFNQLLFDLEAEVFGYFKDWAASTVLDKTFK---RVYEIRRGWGHFIPGRRRYETPVQQRHVQLLGRSVDLTRRISGAMNRKIIEA 660 YRE++LE+T K IQFPIEMS PWI+T+ I+ TK ++E VL+ LD+YNDAAH ALY N QYL++E++AEVNL F+Q ++ L ++F Y+K A S +LDK F+ +++ I+ W P RYET ++QRH+QLLGR++DL R I+ +N ++++ Sbjct: 634 YREFYLEMTMGKRIQFPIEMSLPWILTDQILNTKDPS----------------------------------------------------------------MMECVLYPLDLYNDAAHCALYKFNKQYLYDEVEAEVNLCFDQFVYKLSEQIFAYYKHLAGSILLDKRFRSEAQIHGIKFAW----PQANRYETLMRQRHLQLLGRTIDLNRLIAQRLNAHMLKS 790
BLAST of mRNA_L-elsbetiae_contig7588.16495.1 vs. uniprot
Match: A0A164PEE8_9CRUS (Cytoplasmic FMR1-interacting protein 2 n=1 Tax=Daphnia magna TaxID=35525 RepID=A0A164PEE8_9CRUS) HSP 1 Score: 124 bits (310), Expect = 7.630e-29 Identity = 79/222 (35.59%), Postives = 112/222 (50.45%), Query Frame = 1 Query: 1 YREYHLELT--KEIQFPIEMSFPWIITEHIVKTKKAMALGSASGPRGGGDGSAHGGSVDVSEGGXXXXXXGGDLDGSLTPYGSKKGKXXXXXXXXXXMGHVLVEEVLWALDVYNDAAHRALYVLNSQYLFNEIQAEVNLVFNQLLFDLEAEVFGYFKDWAASTVLDKTFKRVYEIRRGWGHFIPGRRRYETPVQQRHVQLLGRSVDLTRRISGAMNRKIIEA 660 YRE++LE+T K IQFPI+MS PWI+T+HI++TK+ ++E VL+ LD+YND+AH AL V Q+L++E++AEVNL F+Q ++ L ++F Y+K A S +LDK F R G P RYET ++QRHVQLLGRS+DL R IS +N +++A Sbjct: 4017 YREFYLEMTMGKRIQFPIDMSMPWILTDHILRTKEPS----------------------------------------------------------------MMECVLFPLDLYNDSAHYALTVFRKQFLYDEVEAEVNLCFDQFVYKLSEQIFAYYKHLAGSIMLDKRF-RAECAALGTRFTYPPANRYETLMKQRHVQLLGRSIDLNRLISQRVNAALLKA 4173
BLAST of mRNA_L-elsbetiae_contig7588.16495.1 vs. uniprot
Match: UPI000C9E9277 (cytoplasmic FMR1-interacting protein 1-like isoform X1 n=3 Tax=Equus TaxID=9789 RepID=UPI000C9E9277) HSP 1 Score: 119 bits (297), Expect = 2.310e-28 Identity = 78/222 (35.14%), Postives = 113/222 (50.90%), Query Frame = 1 Query: 1 YREYHLELT--KEIQFPIEMSFPWIITEHIVKTKKAMALGSASGPRGGGDGSAHGGSVDVSEGGXXXXXXGGDLDGSLTPYGSKKGKXXXXXXXXXXMGHVLVEEVLWALDVYNDAAHRALYVLNSQYLFNEIQAEVNLVFNQLLFDLEAEVFGYFKDWAASTVLDKTFKRVYEIRRGWGHFIPGRRRYETPVQQRHVQLLGRSVDLTRRISGAMNRKIIEA 660 +RE+ LELT + IQFPIEMS PWI+T HI++TK+A ++E VL++LD+YND+AH AL N Q+L++EI+AEVNL F+Q ++ L ++F Y+K A S +LDK + + + H +P RYET ++QRHVQLLGRSVDL R I+ ++ I ++ Sbjct: 165 FREFFLELTMGRRIQFPIEMSMPWILTNHILETKEAS----------------------------------------------------------------MMEYVLYSLDLYNDSAHYALTRFNKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKIMAGSLLLDKRLRSECKNQGATIH-LPPSNRYETLLKQRHVQLLGRSVDLNRLITQRISAAICKS 321 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7588.16495.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7588.16495.1 >prot_L-elsbetiae_contig7588.16495.1 ID=prot_L-elsbetiae_contig7588.16495.1|Name=mRNA_L-elsbetiae_contig7588.16495.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=222bp YREYHLELTKEIQFPIEMSFPWIITEHIVKTKKAMALGSASGPRGGGDGSback to top mRNA from alignment at L-elsbetiae_contig7588:715..3866+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7588.16495.1 ID=mRNA_L-elsbetiae_contig7588.16495.1|Name=mRNA_L-elsbetiae_contig7588.16495.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3152bp|location=Sequence derived from alignment at L-elsbetiae_contig7588:715..3866+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7588:715..3866+ >mRNA_L-elsbetiae_contig7588.16495.1 ID=mRNA_L-elsbetiae_contig7588.16495.1|Name=mRNA_L-elsbetiae_contig7588.16495.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1332bp|location=Sequence derived from alignment at L-elsbetiae_contig7588:715..3866+ (Laminarionema elsbetiae ELsaHSoW15)back to top |