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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 1150 |
| Cds size | 966 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622816841.819394-UTR-L-elsbetiae_contig758:8286..8424 | 1622816841.819394-UTR-L-elsbetiae_contig758:8286..8424 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig758 8287..8424 - |
| 1691683854.480121-UTR-L-elsbetiae_contig758:8286..8424 | 1691683854.480121-UTR-L-elsbetiae_contig758:8286..8424 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig758 8287..8424 - |
| 1622816841.864871-UTR-L-elsbetiae_contig758:10729..10775 | 1622816841.864871-UTR-L-elsbetiae_contig758:10729..10775 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig758 10730..10775 - |
| 1691683854.5257733-UTR-L-elsbetiae_contig758:10729..10775 | 1691683854.5257733-UTR-L-elsbetiae_contig758:10729..10775 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig758 10730..10775 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622816841.8336663-CDS-L-elsbetiae_contig758:8424..8534 | 1622816841.8336663-CDS-L-elsbetiae_contig758:8424..8534 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig758 8425..8534 - |
| 1691683854.4918284-CDS-L-elsbetiae_contig758:8424..8534 | 1691683854.4918284-CDS-L-elsbetiae_contig758:8424..8534 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig758 8425..8534 - |
| 1622816841.8448312-CDS-L-elsbetiae_contig758:8828..9080 | 1622816841.8448312-CDS-L-elsbetiae_contig758:8828..9080 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig758 8829..9080 - |
| 1691683854.5043921-CDS-L-elsbetiae_contig758:8828..9080 | 1691683854.5043921-CDS-L-elsbetiae_contig758:8828..9080 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig758 8829..9080 - |
| 1622816841.854875-CDS-L-elsbetiae_contig758:10125..10729 | 1622816841.854875-CDS-L-elsbetiae_contig758:10125..10729 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig758 10126..10729 - |
| 1691683854.5154972-CDS-L-elsbetiae_contig758:10125..10729 | 1691683854.5154972-CDS-L-elsbetiae_contig758:10125..10729 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig758 10126..10729 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig758.16483.1 >prot_L-elsbetiae_contig758.16483.1 ID=prot_L-elsbetiae_contig758.16483.1|Name=mRNA_L-elsbetiae_contig758.16483.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=322bp
MVDVVSKRCAHGDCRKVPSFGLAGSGNVEFCKDHAKKGMVNPRGTSSRKI
STGGRGSGSSAAAVGDSVVHRAGAGEKRGGRDARLSAATETSSASDQQAN
KRARRTVDTGMTPTPSTAAEEDSPSDPASAVKTELADVCTMKSTESSGTA
APATMDGRAATSAKVGVSSRAASKPGVMCRAGVAISSPLASGRSLDPAEI
RVMARAGQRKRSRETMTGAAGATAATLAEEEDEEAAVFTSGDVDESTKAR
RGGGRRTVEIPGAAAVLTRVALSCKIKPMMEGEGRGVSSGQAPSCGTPVS
AGRGAPVGVACKQETTDHGDA* back to topmRNA from alignment at L-elsbetiae_contig758:8287..10775- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig758.16483.1 ID=mRNA_L-elsbetiae_contig758.16483.1|Name=mRNA_L-elsbetiae_contig758.16483.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2489bp|location=Sequence derived from alignment at L-elsbetiae_contig758:8287..10775- (Laminarionema elsbetiae ELsaHSoW15)
GGCCGGCGGCAAGAAAGAGTACTGCCGCGATCATGCCAAGGATGGGATGG
TGGACGTGGTCAGTAAGAGATGTGCCCACGGCGACTGCCGTAAGGTGCCA
TCGTTCGGGTTGGCAGGGAGTGGAAATGTTGAGTTCTGCAAAGACCATGC
CAAGAAAGGCATGGTTAACCCACGTGGTACATCCAGCAGAAAGATCTCTA
CAGGCGGCAGGGGTAGCGGAAGCAGCGCGGCAGCAGTTGGTGATAGTGTG
GTTCACCGTGCTGGTGCCGGCGAAAAACGTGGCGGAAGGGACGCCCGTTT
GTCGGCAGCGACCGAGACTTCCTCCGCCAGCGACCAGCAGGCCAACAAGC
GAGCCCGCCGCACAGTCGACACGGGCATGACTCCCACCCCTTCCACAGCT
GCGGAAGAAGATTCTCCTTCTGATCCGGCCTCTGCCGTGAAGACCGAGTT
GGCGGACGTTTGCACGATGAAATCCACGGAATCTTCAGGAACCGCAGCAC
CAGCAACGATGGATGGACGGGCCGCCACCTCCGCCAAAGTCGGCGTATCT
TCGCGGGCGGCGTCGAAGCCAGGGGTGATGTGCAGGGCCGGGGTGGCCAT
CTCTTCCCCATTAGCATCCGGTCGCAGCTTGGATCCTGCCGAAATCAGAG
GTACGTTCCAGCAGAGCAAAAAATATGGAATCCGTGATATTAATACGTAG
TGGATTGCTTTTGTTTGTGCCCAGGGTACACATCCCCACAAAGCAAAGAT
ATGGAAACCGTATTGTAATATTTATTGATCTACTGAAGTGATGTTTGTGC
CTGGGGTACGGGGTGGAGACCTACCTTGTGTGTCTGGTTTCGCTGCCGAT
AGTGTCCCCTCTGTGTTTCAAATGCCTGTCTTACACATTCGAAAATAGTC
AAAGCTGCAGTCTAGCGTAGTAGCTCCACCGACCGCACTTACACGAGCCT
CTGTGTGCCCACCAGCGGTGTTCCTTGTTTCGCTGAAAGGTGAACGCGTG
CTCACGCAGCGGCTCTGGCAAGGGAATGAGCCACGCATGGCCCCGTCGAA
GGGGGGAGACCCTATTTGCAGGACGAAAAATGCCCCCAGAAGTGCGTTTT
GGCACACCGTTTGTCCGACGTAGCCACACCGACCCAACCCAACCCCAACG
CTTACTCTAATCCTAACCCAAACCCGTAGCCTTGACCTGTTGGTCACACT
GAGAGCCTAAAAGTGTCTTATCGCGCGTCTGGTGGCCGGTGGTGCAAAAA
ACGACGCGGGCAGTGACTGGCCAATCAGAAAGAACGTCCTGCAGGAATCA
GTTGCAGGTACATCCTGCGAATAGTGTCTCCCGTCGGAGGGCACTGGGGA
GCACTCTCGTTGTTACTTCGTTTTGAGCCTCCGACCGTCGTGTGTTCTTG
CGTGCACAACGACGGCCTAAATACATGTGTTTTTTCTGGTGCCATTGAGA
CGCACTCTCTTGCTCGACGACCCTGCAGAACTTGGGCACAGTGCGTCTGT
AGATGGTTCAGGTTTAAAACCCATCCCTAAGCGCTCGCGGTCGTGGCACA
AAGCGTGACCGCATCCCGGACTACTCCCTTGTTTCAAGTTTCAAACACCT
CCCGAGGGCCAGGCGTAATAAGGCATTATTCGTTTTGCCTCGGTGCTTCG
TCCCGCAATGTGCTCGCTCCCTCTGATGACGAAATCTTCCCGCAGTAATG
GCGCGAGCAGGTCAGAGGAAGAGAAGCAGAGAGACCATGACAGGCGCAGC
AGGCGCGACTGCAGCGACGCTCGCGGAAGAAGAAGACGAAGAAGCGGCGG
TTTTCACGAGCGGGGATGTTGATGAGTCCACCAAGGCCAGGCGAGGAGGA
GGCCGCCGGACGGTTGAAATACCAGGCGCGGCGGCAGTCCTGACAAGGGT
GGCGCTCTCCTGCAAGATCAAGCCCATGATGGAAGGGGAAGGCCGAGGTG
TGGTGTGGAGATCAGAGGGCTAGGAAAACGTTTAACTTTTGTTCAATCTT
CAATGAGGCCATTCGCGAACATAAAACACCCCCTGATTGGTTCACCCTGT
TCTCCTCGTGATCGGGGTTTGGAGGAGAGCGCGAGTATCACCCGATGTTT
GTTGCTTTTCAGTTTCGTTGATTTCGCGAATCAATGTTGGTGGAGCTGTT
TTGATGGGCCGAAAGCACGCATGGCATGTTGGAGCGCCCCTGCTAGCAAC
GCCATAACTCCCTACGTCAACCTCGAAACGTTTTTGTTCAGGCGTGTCCT
CGGGGCAAGCTCCGTCGTGCGGTACCCCTGTGTCTGCCGGGCGTGGCGCG
CCAGTGGGAGTCGCTTGCAAGCAGGAGACCACGGACCATGGGGATGCGTG
ACAACATCTTCCAAGACCCTGCGTTTTGCTGTCGTGTTCCAGAGGTAGTT
GGCGAGGCACGTGTTGAAAATATCGACTCTTGCGAATAACATACGGTATA
AATAGTAGGAAATTGGGGGGGGATATCTGGTGTTGTCAG back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig758:8287..10775- >mRNA_L-elsbetiae_contig758.16483.1 ID=mRNA_L-elsbetiae_contig758.16483.1|Name=mRNA_L-elsbetiae_contig758.16483.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1932bp|location=Sequence derived from alignment at L-elsbetiae_contig758:8287..10775- (Laminarionema elsbetiae ELsaHSoW15)
ATGGTGGACGTGGTCAGTAAGAGATGTGCCCACGGCGACTGCCGTAAGGT
GCCATCGTTCGGGTTGGCAGGGAGTGGAAATGTTGAGTTCTGCAAAGACC
ATGCCAAGAAAGGCATGGTTAACCCACGTGGTACATCCAGCAGAAAGATC
TCTACAGGCGGCAGGGGTAGCGGAAGCAGCGCGGCAGCAGTTGGTGATAG
TGTGGTTCACCGTGCTGGTGCCGGCGAAAAACGTGGCGGAAGGGACGCCC
GTTTGTCGGCAGCGACCGAGACTTCCTCCGCCAGCGACCAGCAGGCCAAC
AAGCGAGCCCGCCGCACAGTCGACACGGGCATGACTCCCACCCCTTCCAC
AGCTGCGGAAGAAGATTCTCCTTCTGATCCGGCCTCTGCCGTGAAGACCG
AGTTGGCGGACGTTTGCACGATGAAATCCACGGAATCTTCAGGAACCGCA
GCACCAGCAACGATGGATGGACGGGCCGCCACCTCCGCCAAAGTCGGCGT
ATCTTCGCGGGCGGCGTCGAAGCCAGGGGTGATGTGCAGGGCCGGGGTGG
CCATCTCTTCCCCATTAGCATCCGGTCGCAGCTTGGATCCTGCCGAAATC
AGAGATGGTGGACGTGGTCAGTAAGAGATGTGCCCACGGCGACTGCCGTA
AGGTGCCATCGTTCGGGTTGGCAGGGAGTGGAAATGTTGAGTTCTGCAAA
GACCATGCCAAGAAAGGCATGGTTAACCCACGTGGTACATCCAGCAGAAA
GATCTCTACAGGCGGCAGGGGTAGCGGAAGCAGCGCGGCAGCAGTTGGTG
ATAGTGTGGTTCACCGTGCTGGTGCCGGCGAAAAACGTGGCGGAAGGGAC
GCCCGTTTGTCGGCAGCGACCGAGACTTCCTCCGCCAGCGACCAGCAGGC
CAACAAGCGAGCCCGCCGCACAGTCGACACGGGCATGACTCCCACCCCTT
CCACAGCTGCGGAAGAAGATTCTCCTTCTGATCCGGCCTCTGCCGTGAAG
ACCGAGTTGGCGGACGTTTGCACGATGAAATCCACGGAATCTTCAGGAAC
CGCAGCACCAGCAACGATGGATGGACGGGCCGCCACCTCCGCCAAAGTCG
GCGTATCTTCGCGGGCGGCGTCGAAGCCAGGGGTGATGTGCAGGGCCGGG
GTGGCCATCTCTTCCCCATTAGCATCCGGTCGCAGCTTGGATCCTGCCGA
AATCAGAGTAATGGCGCGAGCAGGTCAGAGGAAGAGAAGCAGAGAGACCA
TGACAGGCGCAGCAGGCGCGACTGCAGCGACGCTCGCGGAAGAAGAAGAC
GAAGAAGCGGCGGTTTTCACGAGCGGGGATGTTGATGAGTCCACCAAGGC
CAGGCGAGGAGGAGGCCGCCGGACGGTTGAAATACCAGGCGCGGCGGCAG
TCCTGACAAGGGTGGCGCTCTCCTGCAAGATCAAGCCCATGATGGAAGGG
GAAGGCCGAGTAATGGCGCGAGCAGGTCAGAGGAAGAGAAGCAGAGAGAC
CATGACAGGCGCAGCAGGCGCGACTGCAGCGACGCTCGCGGAAGAAGAAG
ACGAAGAAGCGGCGGTTTTCACGAGCGGGGATGTTGATGAGTCCACCAAG
GCCAGGCGAGGAGGAGGCCGCCGGACGGTTGAAATACCAGGCGCGGCGGC
AGTCCTGACAAGGGTGGCGCTCTCCTGCAAGATCAAGCCCATGATGGAAG
GGGAAGGCCGAGGCGTGTCCTCGGGGCAAGCTCCGTCGTGCGGTACCCCT
GTGTCTGCCGGGCGTGGCGCGCCAGTGGGAGTCGCTTGCAAGCAGGAGAC
CACGGACCATGGGGATGCGTGAGCGTGTCCTCGGGGCAAGCTCCGTCGTG
CGGTACCCCTGTGTCTGCCGGGCGTGGCGCGCCAGTGGGAGTCGCTTGCA
AGCAGGAGACCACGGACCATGGGGATGCGTGA back to top
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