mRNA_L-elsbetiae_contig7568.16465.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig7568.16465.1
Unique NamemRNA_L-elsbetiae_contig7568.16465.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig7568.16465.1 vs. uniprot
Match: D7G6B0_ECTSI (KH type-2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6B0_ECTSI)

HSP 1 Score: 429 bits (1104), Expect = 3.620e-151
Identity = 221/222 (99.55%), Postives = 222/222 (100.00%), Query Frame = 2 
Query:   23 MSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFNFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKSMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDPTGKEGPKTPLSDVITILPPKEEIALEATPNFG 688
            MSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFNFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAK+MKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDPTGKEGPKTPLSDVITILPPKEEIALEATPNFG
Sbjct:    1 MSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFNFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKAMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDPTGKEGPKTPLSDVITILPPKEEIALEATPNFG 222
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BLAST of mRNA_L-elsbetiae_contig7568.16465.1 vs. uniprot
Match: A0A7S2UUD3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUD3_9STRA)

HSP 1 Score: 382 bits (982), Expect = 1.730e-132
Identity = 195/225 (86.67%), Postives = 209/225 (92.89%), Query Frame = 2 
Query:   11 MATNMSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFNFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKSMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDPTGKEGPKTPLSDVITILPPKEEIALEATPNF 685
            MA+N+SKKRKFVADGVFYAELN+LLT ELAE+GYAGVEVRVTPLRTEIII ATR QNVLGEKGQRIRELTSVVQKRFNF DDAVELYAERVA RGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEV+V+GKLRAQRAKSMKFRDGYMIKSG  + +YVD+AVRHV+MRQGVLGV VSIMLPHDPTGK GPK PLSDV+TIL PKE+  L+ TP+ 
Sbjct:    1 MASNISKKRKFVADGVFYAELNQLLTSELAEDGYAGVEVRVTPLRTEIIIRATRTQNVLGEKGQRIRELTSVVQKRFNFADDAVELYAERVANRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVVVSGKLRAQRAKSMKFRDGYMIKSGAAQREYVDYAVRHVLMRQGVLGVKVSIMLPHDPTGKTGPKIPLSDVVTILEPKEDAVLQPTPDI 225
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BLAST of mRNA_L-elsbetiae_contig7568.16465.1 vs. uniprot
Match: A0A836CGW2_9STRA (Prokaryotic type K homology domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGW2_9STRA)

HSP 1 Score: 379 bits (973), Expect = 3.640e-131
Identity = 195/225 (86.67%), Postives = 208/225 (92.44%), Query Frame = 2 
Query:   11 MATNMSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFNFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKSMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDPTGKEGPKTPLSDVITILPPKEEIALEATPNF 685
            M TN+SKKRKFVADGVFYAELNEL+ +ELAE+GY+GVEVRVTPLRTEIII AT+PQNVLGEKGQRIRELTSVVQKRF+FPD+AVELYAERVA RGLCAQTQAESLKYKL+GGLAVRRACYGVLRFIMESGAKGAEVIV+GKLRA RAK+MKF DGYMIKSGR   DYVD AVRHV MRQG+LGV V IMLPHDPTGKEGPKTPLSDVITIL PKEE  LEATP +
Sbjct:    1 MTTNISKKRKFVADGVFYAELNELMRRELAEDGYSGVEVRVTPLRTEIIIRATQPQNVLGEKGQRIRELTSVVQKRFSFPDNAVELYAERVAVRGLCAQTQAESLKYKLVGGLAVRRACYGVLRFIMESGAKGAEVIVSGKLRAARAKAMKFADGYMIKSGRATVDYVDRAVRHVAMRQGMLGVIVRIMLPHDPTGKEGPKTPLSDVITILEPKEEAPLEATPVY 225
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BLAST of mRNA_L-elsbetiae_contig7568.16465.1 vs. uniprot
Match: A0A6V2VE19_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2VE19_HETAK)

HSP 1 Score: 375 bits (962), Expect = 1.850e-129
Identity = 193/224 (86.16%), Postives = 208/224 (92.86%), Query Frame = 2 
Query:   11 MATNMSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFNFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKSMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDPTGKEGPKTPLSDVITILPPKEEIALEATPN 682
            MA N+SKKRKFVADGVFYAELNELLT+ELAE+GYAG+EVR TP+RTEIII ATR Q+VLGEKGQRIRELTSVVQKRFNF DDAVELYAERVA RGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIV+GKLRAQRAK+MKFRDGYMIKSG+  +DYVD+AVRHV+MRQGVLGV VSIM+ HDP+GK GPK PLSDVITIL PKEEI L  TP+
Sbjct:    1 MAPNISKKRKFVADGVFYAELNELLTRELAEDGYAGLEVRTTPIRTEIIIRATRTQSVLGEKGQRIRELTSVVQKRFNFNDDAVELYAERVANRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVSGKLRAQRAKAMKFRDGYMIKSGQASKDYVDYAVRHVLMRQGVLGVKVSIMMQHDPSGKTGPKKPLSDVITILEPKEEIELPPTPS 224
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BLAST of mRNA_L-elsbetiae_contig7568.16465.1 vs. uniprot
Match: W7TS51_9STRA (40s ribosomal protein s3-3 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TS51_9STRA)

HSP 1 Score: 362 bits (929), Expect = 3.430e-124
Identity = 182/219 (83.11%), Postives = 200/219 (91.32%), Query Frame = 2 
Query:   11 MATNMSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFNFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKSMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDPTGKEGPKTPLSDVITILPPKEEIAL 667
            M TN+SKKRKF+ADGVFYAELNELLT+ELAE+GYAGVEVRV PLRTEIIISATR QNVLGEKGQRIRELT+V+QKRFNFPD  VEL+AE+VA RGLCAQ QAESLKYKLLGGLAVRRACYGVLRF+ME GAKGAEVIV+GKLRAQRAKSMKF+DGYMIKSG+ + +YVD+AVRHV+MRQGVLGV V IMLPHDP GK GPK  LSDV+ +L PKEEI L
Sbjct:    1 MTTNISKKRKFIADGVFYAELNELLTRELAEDGYAGVEVRVVPLRTEIIISATRTQNVLGEKGQRIRELTTVIQKRFNFPDGVVELFAEKVASRGLCAQAQAESLKYKLLGGLAVRRACYGVLRFVMEQGAKGAEVIVSGKLRAQRAKSMKFQDGYMIKSGQAKREYVDYAVRHVLMRQGVLGVKVKIMLPHDPAGKIGPKAKLSDVVNVLEPKEEIEL 219
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BLAST of mRNA_L-elsbetiae_contig7568.16465.1 vs. uniprot
Match: F0YDG3_AURAN (KH type-2 domain-containing protein n=2 Tax=Pelagomonadales TaxID=54409 RepID=F0YDG3_AURAN)

HSP 1 Score: 348 bits (892), Expect = 9.610e-119
Identity = 180/216 (83.33%), Postives = 197/216 (91.20%), Query Frame = 2 
Query:   11 MATNMSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFNFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKSMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDPTGKEGPKTPLSDVITILPPKEE 658
            MAT +SKKRKFVADG+FYAELNELLT+ELAE+GYAGVEVRVTPLRTEIII ATR QNVLGEKGQRIRELTSVVQKRF+F D AVELYAERVA RGLCAQ QAESLKYKLLGGLAVRRACYGV+RF+MESGAKG EV+V+GKLRAQRAK+MKF DGYMIK+G  + +YVD AVRHV+MRQGVLGV VSIMLPHD +GK GPK  L+DV+TIL PKEE
Sbjct:    1 MAT-ISKKRKFVADGLFYAELNELLTRELAEDGYAGVEVRVTPLRTEIIIRATRTQNVLGEKGQRIRELTSVVQKRFHFQDGAVELYAERVANRGLCAQAQAESLKYKLLGGLAVRRACYGVVRFVMESGAKGVEVVVSGKLRAQRAKAMKFTDGYMIKTGHSKREYVDSAVRHVLMRQGVLGVKVSIMLPHDASGKTGPKNTLADVVTILEPKEE 215
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BLAST of mRNA_L-elsbetiae_contig7568.16465.1 vs. uniprot
Match: M4B627_HYAAE (KH type-2 domain-containing protein n=26 Tax=Eukaryota TaxID=2759 RepID=M4B627_HYAAE)

HSP 1 Score: 344 bits (883), Expect = 4.080e-117
Identity = 173/217 (79.72%), Postives = 194/217 (89.40%), Query Frame = 2 
Query:   11 MATNMSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFNFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKSMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDPTGKEGPKTPLSDVITILPPKEEI 661
            MA N+SKKRKFVADGVFYAELNELL +EL  +GY+GVEVRVTP+RTEIII ATR Q VLGEKGQRIR LTSVVQKRFNFPD AVELYAERVA RGLC+Q QAESLKY+LLGGLAVRRACY V+RF+ME+GAKG +VIV+GKLRAQRAK+MKF +GYM+K+G   ++YVD AVRHVMMRQGVLGV VSIMLPHDPTGK+GPK  L DV+TIL PKEE+
Sbjct:    1 MAANISKKRKFVADGVFYAELNELLQRELYGDGYSGVEVRVTPMRTEIIIRATRTQEVLGEKGQRIRALTSVVQKRFNFPDGAVELYAERVANRGLCSQAQAESLKYRLLGGLAVRRACYSVVRFVMEAGAKGVQVIVSGKLRAQRAKAMKFNEGYMVKTGNASQEYVDTAVRHVMMRQGVLGVKVSIMLPHDPTGKQGPKRALDDVVTILEPKEEV 217
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BLAST of mRNA_L-elsbetiae_contig7568.16465.1 vs. uniprot
Match: A0A024G886_9STRA (KH type-2 domain-containing protein n=2 Tax=Albugo TaxID=65356 RepID=A0A024G886_9STRA)

HSP 1 Score: 342 bits (878), Expect = 2.190e-116
Identity = 174/219 (79.45%), Postives = 196/219 (89.50%), Query Frame = 2 
Query:   11 MATNMSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFNFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKSMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDPTGKEGPKTPLSDVITILPPKEEIAL 667
            MATN+SKKRKFVADGVFYAELNELL +EL  +GY+GVEVRVTPLRTEIII ATR Q VLGEKGQRIRELTSVVQKRFNF + +VELYAER+A RGLC+Q QAESLKY+LL GLAVRRACY VLRF+ME+GAKG EVIV+GKLRAQRAKSMKF++GYM+K+G  R++YVD AVRHV+MRQGVLGV VSIMLP DPTGK+GPK  L DV+TIL PKE+I L
Sbjct:    1 MATNISKKRKFVADGVFYAELNELLQRELYGDGYSGVEVRVTPLRTEIIIRATRTQEVLGEKGQRIRELTSVVQKRFNFAEGSVELYAERIANRGLCSQAQAESLKYRLLEGLAVRRACYSVLRFVMEAGAKGCEVIVSGKLRAQRAKSMKFKEGYMVKTGNARQEYVDTAVRHVLMRQGVLGVKVSIMLPQDPTGKQGPKRNLDDVVTILEPKEDIPL 219
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BLAST of mRNA_L-elsbetiae_contig7568.16465.1 vs. uniprot
Match: A0A7S2RY40_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RY40_9STRA)

HSP 1 Score: 342 bits (877), Expect = 3.330e-116
Identity = 174/218 (79.82%), Postives = 193/218 (88.53%), Query Frame = 2 
Query:    8 AMATNMSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFNFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKSMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDPTGKEGPKTPLSDVITILPPKEEI 661
            A   N+SKKRKFVADGVFYAELNE L +ELAEEGYAGVE+R TP+RTEIII ATR Q+VLGEKG+RIRELTSVVQKRFNF D AVELYAERVA +GLCAQ QAESLKYKL+GGLAVRRACYGVLRFIMESGA GAEV V+GK R QRAK+MKF+DGYMIK+G+V ++YVD AVRHV+MR GVLGV V IMLPHDP G +GPKTPLSD ITI+ PKEE+
Sbjct:   18 ANTQNISKKRKFVADGVFYAELNEFLIRELAEEGYAGVEIRATPIRTEIIIRATRTQSVLGEKGRRIRELTSVVQKRFNFADGAVELYAERVANKGLCAQAQAESLKYKLIGGLAVRRACYGVLRFIMESGANGAEVTVSGKARGQRAKAMKFQDGYMIKTGKVAQEYVDTAVRHVLMRLGVLGVRVEIMLPHDPKGIQGPKTPLSDKITIIEPKEEV 235
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BLAST of mRNA_L-elsbetiae_contig7568.16465.1 vs. uniprot
Match: A0A024UIL6_9STRA (40S ribosomal protein S3 n=8 Tax=Saprolegniaceae TaxID=4764 RepID=A0A024UIL6_9STRA)

HSP 1 Score: 340 bits (873), Expect = 9.880e-116
Identity = 173/217 (79.72%), Postives = 195/217 (89.86%), Query Frame = 2 
Query:   11 MATNMSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQRIRELTSVVQKRFNFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKSMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDPTGKEGPKTPLSDVITILPPKEEI 661
            MA N+SKKRKFVADGVF+AELNELL +ELAE+GYAGVEVRVTPLRTE+II AT+ Q VLGEKGQRIRELTSVVQKRFNF D AVELYAERVA RGLCAQ QAESLKYKLLGGLAVRRA  GVLRF++E+GAKG EVIV+GKLRAQRAK+MKF++G+M+K+G   ++YVD AVRHV+MRQGVLGV VSIMLPHDPTG+ GPK  L DV+TIL PKEE+
Sbjct:    1 MALNISKKRKFVADGVFFAELNELLQRELAEDGYAGVEVRVTPLRTEVIIRATKTQEVLGEKGQRIRELTSVVQKRFNFADGAVELYAERVANRGLCAQAQAESLKYKLLGGLAVRRAAMGVLRFVLEAGAKGCEVIVSGKLRAQRAKAMKFKEGFMVKTGDANKEYVDTAVRHVLMRQGVLGVKVSIMLPHDPTGRMGPKRNLDDVVTILEPKEEV 217
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7568.16465.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6B0_ECTSI3.620e-15199.55KH type-2 domain-containing protein n=1 Tax=Ectoca... [more]
A0A7S2UUD3_9STRA1.730e-13286.67Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A836CGW2_9STRA3.640e-13186.67Prokaryotic type K homology domain-containing prot... [more]
A0A6V2VE19_HETAK1.850e-12986.16Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
W7TS51_9STRA3.430e-12483.1140s ribosomal protein s3-3 n=3 Tax=Monodopsidaceae... [more]
F0YDG3_AURAN9.610e-11983.33KH type-2 domain-containing protein n=2 Tax=Pelago... [more]
M4B627_HYAAE4.080e-11779.72KH type-2 domain-containing protein n=26 Tax=Eukar... [more]
A0A024G886_9STRA2.190e-11679.45KH type-2 domain-containing protein n=2 Tax=Albugo... [more]
A0A7S2RY40_9STRA3.330e-11679.82Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A024UIL6_9STRA9.880e-11679.7240S ribosomal protein S3 n=8 Tax=Saprolegniaceae T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7568contigL-elsbetiae_contig7568:1849..4985 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score433.3
Seed ortholog evalue6.8e-119
Seed eggNOG ortholog2880.D7G6B0
Preferred nameRPS3
KEGG koko:K02985
KEGG Pathwayko03010,map03010
KEGG ModuleM00177
Hectar predicted targeting categoryother localisation
GOsGO:0000054,GO:0000056,GO:0000184,GO:0000226,GO:0000302,GO:0000702,GO:0000956,GO:0001726,GO:0001817,GO:0001819,GO:0001932,GO:0001934,GO:0002181,GO:0002682,GO:0002684,GO:0002694,GO:0002696,GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003723,GO:0003729,GO:0003735,GO:0003824,GO:0003906,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005759,GO:0005783,GO:0005789,GO:0005791,GO:0005819,GO:0005829,GO:0005840,GO:0005844,GO:0005856,GO:0005886,GO:0005911,GO:0006139,GO:0006259,GO:0006281,GO:0006282,GO:0006355,GO:0006401,GO:0006402,GO:0006403,GO:0006405,GO:0006407,GO:0006412,GO:0006413,GO:0006417,GO:0006518,GO:0006605,GO:0006611,GO:0006612,GO:0006613,GO:0006614,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0006950,GO:0006970,GO:0006974,GO:0006979,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007051,GO:0007059,GO:0008017,GO:0008092,GO:0008104,GO:0008134,GO:0008150,GO:0008152,GO:0008284,GO:0008534,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009506,GO:0009628,GO:0009636,GO:0009651,GO:0009719,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010035,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010562,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0010638,GO:0010646,GO:0010647,GO:0010941,GO:0010942,GO:0010950,GO:0010952,GO:0012505,GO:0015031,GO:0015630,GO:0015631,GO:0015833,GO:0015931,GO:0015935,GO:0016020,GO:0016043,GO:0016070,GO:0016071,GO:0016363,GO:0016787,GO:0016788,GO:0016798,GO:0016799,GO:0016829,GO:0016835,GO:0017148,GO:0019104,GO:0019219,GO:0019220,GO:0019222,GO:0019439,GO:0019538,GO:0019843,GO:0019866,GO:0019899,GO:0019900,GO:0019901,GO:0022402,GO:0022407,GO:0022409,GO:0022607,GO:0022613,GO:0022626,GO:0022627,GO:0023051,GO:0023056,GO:0030054,GO:0030155,GO:0030162,GO:0030425,GO:0030544,GO:0030684,GO:0030686,GO:0030688,GO:0030867,GO:0031072,GO:0031090,GO:0031110,GO:0031112,GO:0031113,GO:0031116,GO:0031252,GO:0031253,GO:0031256,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031334,GO:0031396,GO:0031397,GO:0031399,GO:0031400,GO:0031401,GO:0031503,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0031984,GO:0032069,GO:0032070,GO:0032071,GO:0032075,GO:0032077,GO:0032079,GO:0032268,GO:0032269,GO:0032270,GO:0032271,GO:0032273,GO:0032356,GO:0032357,GO:0032358,GO:0032587,GO:0032663,GO:0032743,GO:0032872,GO:0032874,GO:0032886,GO:0032944,GO:0032946,GO:0032991,GO:0033036,GO:0033043,GO:0033365,GO:0033554,GO:0033674,GO:0033750,GO:0034097,GO:0034248,GO:0034249,GO:0034399,GO:0034599,GO:0034612,GO:0034613,GO:0034614,GO:0034641,GO:0034645,GO:0034655,GO:0035690,GO:0036477,GO:0042102,GO:0042104,GO:0042127,GO:0042129,GO:0042175,GO:0042221,GO:0042254,GO:0042325,GO:0042327,GO:0042493,GO:0042542,GO:0042769,GO:0042886,GO:0042981,GO:0042995,GO:0043005,GO:0043043,GO:0043065,GO:0043066,GO:0043067,GO:0043068,GO:0043069,GO:0043085,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043280,GO:0043281,GO:0043405,GO:0043406,GO:0043408,GO:0043410,GO:0043506,GO:0043507,GO:0043523,GO:0043524,GO:0043549,GO:0043603,GO:0043604,GO:0044085,GO:0044087,GO:0044089,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044390,GO:0044391,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044429,GO:0044430,GO:0044432,GO:0044444,GO:0044445,GO:0044446,GO:0044459,GO:0044463,GO:0044464,GO:0044877,GO:0045047,GO:0045184,GO:0045738,GO:0045739,GO:0045785,GO:0045859,GO:0045860,GO:0045862,GO:0045934,GO:0045935,GO:0045937,GO:0046006,GO:0046328,GO:0046330,GO:0046483,GO:0046677,GO:0046700,GO:0046907,GO:0048037,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0050657,GO:0050658,GO:0050670,GO:0050671,GO:0050776,GO:0050778,GO:0050789,GO:0050790,GO:0050794,GO:0050854,GO:0050856,GO:0050857,GO:0050862,GO:0050863,GO:0050865,GO:0050867,GO:0050870,GO:0050896,GO:0051018,GO:0051029,GO:0051052,GO:0051053,GO:0051054,GO:0051090,GO:0051091,GO:0051092,GO:0051128,GO:0051130,GO:0051168,GO:0051169,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051225,GO:0051234,GO:0051236,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051248,GO:0051249,GO:0051251,GO:0051252,GO:0051336,GO:0051338,GO:0051345,GO:0051347,GO:0051493,GO:0051495,GO:0051536,GO:0051540,GO:0051606,GO:0051640,GO:0051641,GO:0051649,GO:0051656,GO:0051716,GO:0051879,GO:0052547,GO:0052548,GO:0055044,GO:0060255,GO:0060548,GO:0061481,GO:0065007,GO:0065009,GO:0070013,GO:0070181,GO:0070301,GO:0070302,GO:0070304,GO:0070507,GO:0070663,GO:0070665,GO:0070727,GO:0070848,GO:0070887,GO:0070925,GO:0070972,GO:0071159,GO:0071166,GO:0071236,GO:0071310,GO:0071345,GO:0071356,GO:0071363,GO:0071426,GO:0071428,GO:0071495,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071900,GO:0071902,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0072686,GO:0080090,GO:0080134,GO:0080135,GO:0090150,GO:0090304,GO:0090305,GO:0097064,GO:0097100,GO:0097159,GO:0097237,GO:0097447,GO:0097458,GO:0098552,GO:0098554,GO:0098556,GO:0098562,GO:0098588,GO:0098590,GO:0098827,GO:0120025,GO:0120038,GO:0140078,GO:0140097,GO:1900117,GO:1900119,GO:1901214,GO:1901215,GO:1901222,GO:1901224,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901700,GO:1901701,GO:1902229,GO:1902231,GO:1902531,GO:1902533,GO:1902544,GO:1902546,GO:1902903,GO:1902905,GO:1903037,GO:1903039,GO:1903320,GO:1903321,GO:1903506,GO:1905051,GO:1905053,GO:1990089,GO:1990090,GO:1990904,GO:2000112,GO:2000113,GO:2000116,GO:2001020,GO:2001021,GO:2001022,GO:2001056,GO:2001141,GO:2001233,GO:2001235,GO:2001242,GO:2001244,GO:2001270,GO:2001272
EggNOG free text desc.oxidized purine nucleobase lesion DNA N-glycosylase activity
EggNOG OGsCOG0092@1,KOG3181@2759
Ec32 ortholog descriptionRibosomal protein S3, C-terminal
Ec32 orthologEc-10_001190.1
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko03011
Exons7
Model size803
Cds size681
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816840.4925458-UTR-L-elsbetiae_contig7568:1848..18581622816840.4925458-UTR-L-elsbetiae_contig7568:1848..1858Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7568 1849..1858 +
1691683853.6146245-UTR-L-elsbetiae_contig7568:1848..18581691683853.6146245-UTR-L-elsbetiae_contig7568:1848..1858Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7568 1849..1858 +
1622816840.5902872-UTR-L-elsbetiae_contig7568:4873..49851622816840.5902872-UTR-L-elsbetiae_contig7568:4873..4985Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7568 4874..4985 +
1691683853.7106946-UTR-L-elsbetiae_contig7568:4873..49851691683853.7106946-UTR-L-elsbetiae_contig7568:4873..4985Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7568 4874..4985 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816840.5064585-CDS-L-elsbetiae_contig7568:1858..19271622816840.5064585-CDS-L-elsbetiae_contig7568:1858..1927Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7568 1859..1927 +
1691683853.6278272-CDS-L-elsbetiae_contig7568:1858..19271691683853.6278272-CDS-L-elsbetiae_contig7568:1858..1927Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7568 1859..1927 +
1622816840.5175855-CDS-L-elsbetiae_contig7568:2077..22351622816840.5175855-CDS-L-elsbetiae_contig7568:2077..2235Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7568 2078..2235 +
1691683853.6386998-CDS-L-elsbetiae_contig7568:2077..22351691683853.6386998-CDS-L-elsbetiae_contig7568:2077..2235Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7568 2078..2235 +
1622816840.5289543-CDS-L-elsbetiae_contig7568:2516..25921622816840.5289543-CDS-L-elsbetiae_contig7568:2516..2592Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7568 2517..2592 +
1691683853.6502483-CDS-L-elsbetiae_contig7568:2516..25921691683853.6502483-CDS-L-elsbetiae_contig7568:2516..2592Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7568 2517..2592 +
1622816840.5405538-CDS-L-elsbetiae_contig7568:3345..34471622816840.5405538-CDS-L-elsbetiae_contig7568:3345..3447Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7568 3346..3447 +
1691683853.6610453-CDS-L-elsbetiae_contig7568:3345..34471691683853.6610453-CDS-L-elsbetiae_contig7568:3345..3447Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7568 3346..3447 +
1622816840.551342-CDS-L-elsbetiae_contig7568:3754..38451622816840.551342-CDS-L-elsbetiae_contig7568:3754..3845Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7568 3755..3845 +
1691683853.6717079-CDS-L-elsbetiae_contig7568:3754..38451691683853.6717079-CDS-L-elsbetiae_contig7568:3754..3845Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7568 3755..3845 +
1622816840.5667794-CDS-L-elsbetiae_contig7568:4390..44791622816840.5667794-CDS-L-elsbetiae_contig7568:4390..4479Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7568 4391..4479 +
1691683853.6829903-CDS-L-elsbetiae_contig7568:4390..44791691683853.6829903-CDS-L-elsbetiae_contig7568:4390..4479Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7568 4391..4479 +
1622816840.579411-CDS-L-elsbetiae_contig7568:4777..48731622816840.579411-CDS-L-elsbetiae_contig7568:4777..4873Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7568 4778..4873 +
1691683853.6937368-CDS-L-elsbetiae_contig7568:4777..48731691683853.6937368-CDS-L-elsbetiae_contig7568:4777..4873Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7568 4778..4873 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7568.16465.1prot_L-elsbetiae_contig7568.16465.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig7568 1859..4873 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig7568.16465.1

>prot_L-elsbetiae_contig7568.16465.1 ID=prot_L-elsbetiae_contig7568.16465.1|Name=mRNA_L-elsbetiae_contig7568.16465.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=227bp
MATNMSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIII
SATRPQNVLGEKGQRIRELTSVVQKRFNFPDDAVELYAERVAKRGLCAQT
QAESLKYKLLGGLAVRRACYGVLRFIMESGAKGAEVIVAGKLRAQRAKSM
KFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGVTVSIMLPHDPTGKEGP
KTPLSDVITILPPKEEIALEATPNFG*
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mRNA from alignment at L-elsbetiae_contig7568:1849..4985+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig7568.16465.1 ID=mRNA_L-elsbetiae_contig7568.16465.1|Name=mRNA_L-elsbetiae_contig7568.16465.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3137bp|location=Sequence derived from alignment at L-elsbetiae_contig7568:1849..4985+ (Laminarionema elsbetiae ELsaHSoW15)
AGGCACAGCCATGGCGACCAACATGTCGAAGAAGCGCAAGTTCGTGGCGG
ATGGCGTGTTCTACGCCGAGCTCAACGAGGTAAGCCACTTGCATTTCTCG
CGGAGTTGGCATTACCCATGGAATAATCCGCTTCCCTTACGGTGTGGTCC
CGAAACTAAGGTACAGACCACACAGAGGCCCTCGTGAATCTCTCTCCCCA
CTCTCCGTCGGTGTGTTGTGGTTATTCAGCTTCTTACCCAGGAGCTTGCG
GAGGAGGGATACGCGGGTGTGGAGGTGCGCGTGACGCCTCTCCGCACTGA
GATCATCATCAGCGCCACCCGCCCCCAGAATGTTCTTGGCGAGAAGGGCC
AGCGCATCAGGGAGCTCACCTCCGTCGTGCAGAAGCGGTGCGTTCACGCG
TGACCGGCTGGCGTCGCCGTGCTTCCAAAATGGGTCCATCTCTTGTACAC
GCCCCACCGCTTGCTACTACTCAATCTCGTCCTGATGAACCTTAGCACAT
GCGGACGATTAACGATAATTCAAAAGCAGCCACTGTGTCCAATAGCGTAT
AGCACACGCAGATGTGGTCGTCAATGAAAGAGCACTTACCTGCTGTTGTT
GTACACAACGGACAACCCTGTTACAACTCTCCTGTCCGCTCTCGCCTGTT
GATAACGGTCCTGTGCAGGTTCAACTTCCCCGATGACGCCGTCGAGCTCT
ATGCGGAGCGAGTCGCTAAGCGTGGTCTTTGCGCGCAGACTCAGGTATTG
GATCGCGCATAGTTGCACTTCCCTAACGAACGCACGCTTCGAAGATAATT
TAGTGAGAGGTGGATCTGTGTAAAGCGAGTGTTGTCTAAGCTGCACACGG
TCGGTTGTTTTAGATGGCTACAGGCAAGCAAAGCCCACGGAATCTTGGTT
ACTTTTCGCTTCTCCAAAGCTCTTCGCGCCTCGGCTTCGATAACGTCGTT
GTATCCCAGCAGTGCGGGGCGTCGCAGGCAGGGAGCGCCTCCGAGCTCAA
ATTGTTTCCACTGCCTTCCAGGGCTTGACAGCGTCCAATACAGTGCAGCG
TCAGCGACCCCGCTGCATGCGATCGATGCTGTTCACAAATTTCTGTCACT
GCAAAGCGTAATGTAGAAAGCATATAAACACAAATTCCCGGTGGGCAGCA
CGAAAAAAGGTATTGGCATATTCTGAAGAGGTGTCTGCTGTTCATACTGC
TGTGTGCTGTCAACAGCCAGCATGTGAGTGTGCTCGTGTTTTCGCGCTAT
GTCCTGTTGACAGTTGTACACTGTGTGTGCGTTCCACAGCAGTAACGACC
AAGGCGAAGTTAGCTACATCAACGCGAGGCCGGCCGCAACAGTAGTTCGA
TCAGTCAAGGTGCCTTTGGCCTTGCGCACAGCATACGTAGTAGTGTCAAA
CCAGTGAACATGTCTGTGCCTTGCAGGTGGCCCCATCTCATATCGGTGTG
CTCGTGCTGATTTGACCCGGACTGCGTCTCATGCTGTAAATCCGCAGGCC
GAGTCGCTCAAGTACAAGCTTTTGGGTGGACTTGCCGTGCGCCGCGCATG
CTACGGTGTGCTCCGCTTCATCATGGAGTCCGGGGCCAAGGGTGCTGAGG
TGGGGAGGAGCGTCGGGGTCTTCCGACTTGGCGTGTGACGCTGTATTTAG
CGGCAAACCGGAAACGTTGATGTTTGGTTCGTTTAGAAGAACGACGGTAT
GTTCATACGTATCATCGTCATTGCTTGCCGGGGGACCTGATGCGTACTTC
GTGGAGATGATGCCGAGCACGCGGGGAAGGGAAGCTTAGCTGCCAGCGGT
CGCGGGTCTTGCTTTCCGGGCTTTTATGCACGTGTATCTTGTGCAAAGTG
GCTTTCTCGCAGCAACCTGATACTCAAAAGTATGTTTTTGTCTCCGAAAA
CCCCAGGTCATTGTGGCTGGTAAGCTCAGGGCGCAGCGTGCGAAGTCCAT
GAAGTTCCGCGACGGCTACATGATCAAGAGCGGCCGCGTCAGGGAGGGTG
AGTACGTTTGTCAACGCTGTCTCTAATGTGGTTTCTCTGTCCAAGAAAAG
CTGTAGTTTGGTGTGTACCAAGGTGGTGCTCCTAATTCTACTGCTGTGTT
GAGCTGCCCTCCTCCTCTTGATGTGTTGCTGTCTAGTGGGGCTTCGTCGC
CTGTTTAGGCCGAGAAATCGAAGCTGTATTCGTGACCGTTTTCACCTAGC
GAACGTTGGATTCATGACTTCGTCAAATTTCCAAACTTGCATTCAAAACA
TTTTTCAGAATAAGTCGAGCCGTGAAGAATTGTTCAAGTATTACCTCAAT
TAAGAAGAGGAAAGACATTTTCAGTGTCGGCCGCCTCCTCTTGCGCGCCA
AGAATAAGGCAACGGGATTGCTAGCAAGAACGTCGACGAAATTTAGCTGG
AAGGATACCGAGCGGTATTTTTGTGGCGCCAACCTAATCTTCCCAGGCTC
ATCCCGACAGAGTGGTATGCATCTTAAAGAACGTTCAAGTGACCCACGCC
CCCCCTGCTCATATATGCCGTGAAACTTGTTTTGTCCTCCAGACTACGTG
GACCACGCTGTGCGTCACGTCATGATGCGCCAGGGTGTGCTTGGCGTCAC
TGTGTCCATCATGCTTCCCCACGACCCCACGGTAAGAATGATAAAAGCAT
TATTTCGTTGCTCAACATTCGCTGGGTTTGAAGTGTATCATGCGTGCGAC
CAGCGACCAATTTCGCTCTGGTCTGTTTATAAGGCAGAGTAGCTCAGCTT
GCATGTAAATTGATGTGCTGCGAGTGCAGCCAACAACCAATTTCGTTCCA
GTCCGTTTTCACGGCGGATTTTTGGCACAAACTTGCATGCATTTTGATAT
TTTCGTGCCACTCATCCCTCTATTATTCACGCTGTGTCGACCATCCCCAT
CTCTTTCGAATGGTCGCCTGTCTTTGCAGGGCAAGGAGGGGCCCAAGACC
CCCCTGTCGGACGTGATCACCATCCTTCCGCCCAAGGAGGAGATTGCCCT
GGAGGCCACACCCAACTTTGGTTAAAAGAAAGGGTCTCTTCGGTTGGTTG
GTAGGGGCAAACATGTCCTTATCAGGGGAGGGATAGAAGGACATTGATTT
GCCGCAATTGGAGTGGTTAATGGAAGTGCTCTTCAAA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig7568:1849..4985+

>mRNA_L-elsbetiae_contig7568.16465.1 ID=mRNA_L-elsbetiae_contig7568.16465.1|Name=mRNA_L-elsbetiae_contig7568.16465.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1362bp|location=Sequence derived from alignment at L-elsbetiae_contig7568:1849..4985+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGCGACCAACATGTCGAAGAAGCGCAAGTTCGTGGCGGATGGCGTGTT
CTACGCCGAGCTCAACGAGATGGCGACCAACATGTCGAAGAAGCGCAAGT
TCGTGGCGGATGGCGTGTTCTACGCCGAGCTCAACGAGCTTCTTACCCAG
GAGCTTGCGGAGGAGGGATACGCGGGTGTGGAGGTGCGCGTGACGCCTCT
CCGCACTGAGATCATCATCAGCGCCACCCGCCCCCAGAATGTTCTTGGCG
AGAAGGGCCAGCGCATCAGGGAGCTCACCTCCGTCGTGCAGAAGCGCTTC
TTACCCAGGAGCTTGCGGAGGAGGGATACGCGGGTGTGGAGGTGCGCGTG
ACGCCTCTCCGCACTGAGATCATCATCAGCGCCACCCGCCCCCAGAATGT
TCTTGGCGAGAAGGGCCAGCGCATCAGGGAGCTCACCTCCGTCGTGCAGA
AGCGGTTCAACTTCCCCGATGACGCCGTCGAGCTCTATGCGGAGCGAGTC
GCTAAGCGTGGTCTTTGCGCGCAGACTCAGGTTCAACTTCCCCGATGACG
CCGTCGAGCTCTATGCGGAGCGAGTCGCTAAGCGTGGTCTTTGCGCGCAG
ACTCAGGCCGAGTCGCTCAAGTACAAGCTTTTGGGTGGACTTGCCGTGCG
CCGCGCATGCTACGGTGTGCTCCGCTTCATCATGGAGTCCGGGGCCAAGG
GTGCTGAGGCCGAGTCGCTCAAGTACAAGCTTTTGGGTGGACTTGCCGTG
CGCCGCGCATGCTACGGTGTGCTCCGCTTCATCATGGAGTCCGGGGCCAA
GGGTGCTGAGGTCATTGTGGCTGGTAAGCTCAGGGCGCAGCGTGCGAAGT
CCATGAAGTTCCGCGACGGCTACATGATCAAGAGCGGCCGCGTCAGGGAG
GGTCATTGTGGCTGGTAAGCTCAGGGCGCAGCGTGCGAAGTCCATGAAGT
TCCGCGACGGCTACATGATCAAGAGCGGCCGCGTCAGGGAGGACTACGTG
GACCACGCTGTGCGTCACGTCATGATGCGCCAGGGTGTGCTTGGCGTCAC
TGTGTCCATCATGCTTCCCCACGACCCCACGACTACGTGGACCACGCTGT
GCGTCACGTCATGATGCGCCAGGGTGTGCTTGGCGTCACTGTGTCCATCA
TGCTTCCCCACGACCCCACGGGCAAGGAGGGGCCCAAGACCCCCCTGTCG
GACGTGATCACCATCCTTCCGCCCAAGGAGGAGATTGCCCTGGAGGCCAC
ACCCAACTTTGGTTAAGGCAAGGAGGGGCCCAAGACCCCCCTGTCGGACG
TGATCACCATCCTTCCGCCCAAGGAGGAGATTGCCCTGGAGGCCACACCC
AACTTTGGTTAA
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