mRNA_L-elsbetiae_contig755.16449.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig755.16449.1 vs. uniprot
Match: A0A6H5JQI8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQI8_9PHAE) HSP 1 Score: 324 bits (831), Expect = 2.850e-107 Identity = 218/333 (65.47%), Postives = 240/333 (72.07%), Query Frame = 1 Query: 1 QGQLEIARARLTGRGVGGDPASASFADAVSRVVSAAEGTLRQENSNGALLSRLASSA----------------------------AAEAVRAAAGALAKLASAVKATASTGSEVDFAAVKGEVVAEARALKDRADGVGRDLAALGRRVEAAVGQMEAWQQRKAEAPEFAAEEXXXXXXXXXXXXXXXXXXLREMRALLPEAV-----------------------DAAG--TAAAGVFYPSDLCVRLRECRPLHWLVSAPEDIAGANFLAGEGAPAFTQLEGMDVVEMRAVWSVLPREFSRDGDGKKAEWRARFRQQLEGLARQQDRAVVTAG 840 QGQLE ARARL GRGVG D +A+FA A+S+VV+A+ G L +E+ +LS L SS+ AA VRAAA ++AKLA+AV AT TGSEVD+A+VK EV AEA+ L+D ADG GR+LAAL RRVEAAVGQMEAWQQRKAEAPEFAAEEXXXXXXXXXXXXXXX LREMRAL+PEAV D G T GVFYPS+LCVRL+ECRPLHWLVSAPEDIAGANFLAGEGA AFTQLEGMD+ EMRAVWSVLPREF RDGDGKKAEWRARFR QLEGLARQQD AVVTAG Sbjct: 28 QGQLETARARLAGRGVGVDAVTAAFATAMSKVVAASPGVLGREDGGSRVLSLLKSSSEGVLEALQEPRAAAGAVAATAAAMPADVAAREVRAAARSMAKLATAVLATLRTGSEVDYASVKAEVAAEAQRLRDLADGHGRELAALSRRVEAAVGQMEAWQQRKAEAPEFAAEEXXXXXXXXXXXXXXXSRALREMRALIPEAVWDMNAGDIQAAAAQAPAQAGVSADGGGGATRVGGVFYPSELCVRLKECRPLHWLVSAPEDIAGANFLAGEGAAAFTQLEGMDLTEMRAVWSVLPREFLRDGDGKKAEWRARFRVQLEGLARQQDGAVVTAG 360
BLAST of mRNA_L-elsbetiae_contig755.16449.1 vs. uniprot
Match: D7FRP3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRP3_ECTSI) HSP 1 Score: 321 bits (823), Expect = 2.500e-97 Identity = 195/281 (69.40%), Postives = 214/281 (76.16%), Query Frame = 1 Query: 1 QGQLEIARARLTGRGVGGDPASASFADAVSRVVSAAEGTLRQENSNGALLSRLASSAAAEA-VRAAAGALAKLASAVKATASTGSEVDFAAVKGEVVAEARALKDRADGVGRDLAALGRRVEAAVGQMEAWQQRKAEAPEFAAEEXXXXXXXXXXXXXXXXXXLREMRALLPEAVDAAGTAAAGVFYPSDLCVRLRECRPLHWLVSAPEDIAGANFLAGEGAPAFTQLEGMDVVEMRAVWSVLPREFSRDGDGKKAEWRARFRQQLEGLARQQDRAVVTAG 840 QGQLE ARARL GRGVGGD A+A+FA A S+V +A+ G L QE+ +LSRL SS+ VRAAA A+AKLA+AV AT TGSEVD+A+VK EV AEA+ L+D ADG GR+LAAL RRVEAAVGQMEAWQQRKA APEFAAEE RE A + A T GVFYPSDLCVRL+ECRPLHWLVSAPEDIAGANFLAGEGA AFTQLEGMD+ EMRAVWSVLPREF RDGDGKKAEWRARFR QLEGLARQQD A+VTAG Sbjct: 706 QGQLETARARLAGRGVGGDAATAAFATAASKVEAASPGALGQEDGGSRVLSRLKSSSEGVLEVRAAARAMAKLATAVLATLRTGSEVDYASVKAEVGAEAQRLRDLADGHGRELAALSRRVEAAVGQMEAWQQRKAGAPEFAAEEAAREEAWSEAN--------REAGASVDGGRGA--TRVGGVFYPSDLCVRLKECRPLHWLVSAPEDIAGANFLAGEGAAAFTQLEGMDLTEMRAVWSVLPREFLRDGDGKKAEWRARFRVQLEGLARQQDGAIVTAG 976
BLAST of mRNA_L-elsbetiae_contig755.16449.1 vs. uniprot
Match: D7FIN4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIN4_ECTSI) HSP 1 Score: 104 bits (259), Expect = 2.280e-21 Identity = 70/202 (34.65%), Postives = 103/202 (50.99%), Query Frame = 1 Query: 280 EVVAEARA------LKDRADGVGRDLAALGRRVEAAVGQMEAWQQRKAEAPEFAA--EEXXXXXXXXXXXXXXXXXXLREMRALLPEAVDAAGTAA-------AGVFYPSDLCVRLRECRPLHWLVSAPEDIAGANFLAGEGAPAFTQLEGMDVVEMRAVWSVLPREFSRDGDGKKAEWRARFRQQLEGLARQQDRAVVTAG 840 E++A ARA ++D A + DL +AA+ +ME W++RK PE+ E L+ R L+P V A AG YP +L +R++E R LHW+V+ P+DIA +NFL G+ A FT L+ D+VE+RA+ + LP +F D DG+KA WR F Q+ + L Q+ V+ G Sbjct: 948 ELIAPARAKSGLSGIQDAAKTLAEDLRKTRSGSQAALARMEKWRERKEALPEYGQGNEVADQEKAWFEREREANDLALQRTRKLIPVGVTRLTVAELEQHALDAGSLYPRELTLRIKENRLLHWVVTHPDDIARSNFLRGDHAHFFTNLDKYDLVELRAIMACLPAKFEVDADGRKAAWRELFLQRAQSLVAQERGDTVSGG 1149
BLAST of mRNA_L-elsbetiae_contig755.16449.1 vs. uniprot
Match: A0A1V9ZQ70_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZQ70_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 4.010e-18 Identity = 58/176 (32.95%), Postives = 91/176 (51.70%), Query Frame = 1 Query: 331 RDLAALGRRVEAAVGQMEAWQQRKAEAPEFAAEEXXXXXXXXXXXXXXXXXXLREMRALLPEAVDAAG-------TAAAGVFYPSDLCVRLRECRPLHWLVSAPEDIAGANFLAGEGAPAFTQLEGMDVVEMRAVWSVLPREFSRDGDGKKAEWRARFRQQLEGLARQQDRAVVTA 837 ++LA R+V + + +ME W+ R+ A E+ AE L + +L+PE++ A T A GV Y DL L++ + L W+V+ +D A NF+ G+ A FT +E D+ E+RA++ LP F D +G+K+EWR F L+ L +QQ+ VTA Sbjct: 444 KELAIKERKVNSTLKKMEIWRTRRENAKEYPAELRKVEAEWRAKHLLDNQICLERLCSLIPESIAAMSIEMLLDATKAMGVLYTRDLANYLKQNKLLQWVVTHEKDKARENFITGDTAQCFTNIEMYDITELRAIYLALPENFEFDKEGRKSEWRQNFVSHLKVLVQQQNGDSVTA 619
BLAST of mRNA_L-elsbetiae_contig755.16449.1 vs. uniprot
Match: A0A1V9ZGN9_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZGN9_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 9.960e-18 Identity = 58/177 (32.77%), Postives = 89/177 (50.28%), Query Frame = 1 Query: 331 RDLAALGRRVEAAVGQMEAWQQRKAEAPEFAAEEXXXXXXXXXXXXXXXXXXLREMRALLPEAVDAA-------GTAAAGVFYPSDLCVRLRECRPLHWLVSAPEDIAGANFLAGEGAPAFTQLEGMDVVEMRAVWSVLPREFSRDGDGKKAEWRARFRQQLEGLARQQDRAVVTAG 840 ++L R + A + Q+E W+ R+ + E+ AE L + +L+P+++ A AAGV Y DL L++ + L W+V+ +D A NF++G+ A FT LE D+ EMR ++ LP F D +G+KAEWRA F L+ L +Q D V AG Sbjct: 461 KELQRKERHINATLKQLEVWRARRETSKEYPAEMRRLEAAWCAKHLPDNQVCLERLCSLIPDSIAAMPIETLLDAARAAGVLYTRDLANYLKQNKLLQWVVTHEKDKARDNFISGDTAQCFTNLEMYDITEMRGIYLALPESFEFDKEGRKAEWRADFIAHLKILVQQYDGDTVKAG 637
BLAST of mRNA_L-elsbetiae_contig755.16449.1 vs. uniprot
Match: A0A067C5X9_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C5X9_SAPPC) HSP 1 Score: 90.5 bits (223), Expect = 1.100e-16 Identity = 58/177 (32.77%), Postives = 87/177 (49.15%), Query Frame = 1 Query: 331 RDLAALGRRVEAAVGQMEAWQQRKAEAPEFAAEEXXXXXXXXXXXXXXXXXXLREMRALLPEAVDAAGT-------AAAGVFYPSDLCVRLRECRPLHWLVSAPEDIAGANFLAGEGAPAFTQLEGMDVVEMRAVWSVLPREFSRDGDGKKAEWRARFRQQLEGLARQQDRAVVTAG 840 R+L R++ A + QME W+ R+ A E++ E L + +L+P+++ A AGV Y DL L++ + L W+V+ D A NF++G+ A FT LE D+ EMRA++ LP F D +G+KAEWR F L+ L +Q V AG Sbjct: 449 RELQIKDRQINATLKQMEIWRSRRENAKEYSGEMKRLEEAWRANHSADNQVCLERLCSLIPDSIAAMSVDQLLDAAKQAGVLYTRDLVNYLKQNKLLQWVVTHEVDKARDNFISGDTAQCFTNLELYDITEMRAIYLALPDAFEFDKEGRKAEWRVGFIAHLKVLVQQYHGETVKAG 625
BLAST of mRNA_L-elsbetiae_contig755.16449.1 vs. uniprot
Match: A0A7S2RRF7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RRF7_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 1.220e-9 Identity = 35/73 (47.95%), Postives = 45/73 (61.64%), Query Frame = 1 Query: 601 HWLVSAPEDIAGANFLAGEGAPAFTQLEGMDVVEMRAVWSVLPREFSRDGDGKKAEWRARFRQQLEGLARQQD 819 HWLV P DI ANFL G AF L+ D+VE+RAV+SV+P F D DG+K WR + L+ LA +Q+ Sbjct: 1 HWLVLHPADIKDANFLKGGSRVAFLNLQDYDIVELRAVFSVVPDVFDLDSDGEKKRWREVLVKTLKELAARQE 73
BLAST of mRNA_L-elsbetiae_contig755.16449.1 vs. uniprot
Match: A0A7S2R6X4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R6X4_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 1.410e-9 Identity = 53/186 (28.49%), Postives = 89/186 (47.85%), Query Frame = 1 Query: 280 EVVAEARALKDRADGVGRDLAALGRRVEAAVGQMEAWQQRKAEAPEFAAEEXXXXXXXXXXXXXXXXXXLREMRALLPEAVDAAG-TAAAGVFYPSDLCVRLRECRPLHWLVSAPEDIAGANFLAGEGAPAFTQLEGMDVVEMRAVWSVLPREFSRDGDGKKAEWRARFRQQLEGLARQQDRAVVT 834 EVV+ +A + +G+ ++ G ++AA + + W + PEF A+E L+ MR +P + ++ T PS L RL E + L WL AP+D +A ++G+D++E+RAVW+ LP +F DGD +KA WR + +L+ L +DR ++ Sbjct: 263 EVVSLDKAQASLQEALGQLMSGEGN-LDAAQAEFDKWDRFVRNHPEFIAQEQAKREAWDQAQAPLNTSALQLMRTFVPPNIWSSSLTTLKDSGLPSGLVKRLWEKKVL-WLTRAPKDFIARIHVADLNMKY--SIQGLDLMELRAVWAALPEKFENDGDDRKAGWRLKIHDRLKELVSSEDRGSLS 444
BLAST of mRNA_L-elsbetiae_contig755.16449.1 vs. uniprot
Match: A0A7S2SCH3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SCH3_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 1.640e-9 Identity = 45/113 (39.82%), Postives = 61/113 (53.98%), Query Frame = 1 Query: 490 REMRALLPEAVDAAGTAAA---GVFYPSDLCVRLRECRPLHWLVSAPEDIAGANFLAGEGAPAFTQLEGMDVVEMRAVWSVLPREFSRDGDGKKAEWRARFRQQLEGLARQQD 819 R MR L+P + G+ P L RL + + L L P DIA + A +G+D++EMRAVW+VLP +F DGDGKKAEWR FRQ+LE L +++ Sbjct: 156 RTMRGLVPPDIKQCSLKTLMERGL--PRALAKRLWDKKILWMLRMHPLDIA---LIHQADLRAKYPNQGLDIIEMRAVWTVLPEDFENDGDGKKAEWRFNFRQKLEELTTKEE 263
BLAST of mRNA_L-elsbetiae_contig755.16449.1 vs. uniprot
Match: A0A836C9Q7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9Q7_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 4.210e-9 Identity = 48/151 (31.79%), Postives = 75/151 (49.67%), Query Frame = 1 Query: 361 EAAVGQMEAWQQRKAEAPEFAAEEXXXXXXXXXXXXXXXXXXLREMRALLPEAVDA---AGTAAAGVFYPSDLCVRLRECRPLHWLVSAPEDIAGANFLAGEGAPAFTQLEGMDVVEMRAVWSVLPREFSRDGDGKKAEWRARFRQQLEGL 804 E+A ++ W + P++A E+ L MR +P + A A AA GV P+ R+ + + LHW+ P+DI + + ++ +G+DVVEMRAVW+ +P+EF D D KKA+WR F Q+L+ L Sbjct: 87 ESAEKDIDRWDKTIRMHPDYAKEQEERAKQWEADNLAANQQALALMRKFVPPDIGASSIAKMAAEGV--PAVAAKRIWKVKVLHWVRWHPDDIKKVHI--ADLQTTYSN-QGLDVVEMRAVWAAMPQEFDLDSDAKKAQWRLFFCQKLQEL 232 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig755.16449.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig755.16449.1 >prot_L-elsbetiae_contig755.16449.1 ID=prot_L-elsbetiae_contig755.16449.1|Name=mRNA_L-elsbetiae_contig755.16449.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=281bp QGQLEIARARLTGRGVGGDPASASFADAVSRVVSAAEGTLRQENSNGALLback to top mRNA from alignment at L-elsbetiae_contig755:246..1319+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig755.16449.1 ID=mRNA_L-elsbetiae_contig755.16449.1|Name=mRNA_L-elsbetiae_contig755.16449.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1074bp|location=Sequence derived from alignment at L-elsbetiae_contig755:246..1319+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig755:246..1319+ >mRNA_L-elsbetiae_contig755.16449.1 ID=mRNA_L-elsbetiae_contig755.16449.1|Name=mRNA_L-elsbetiae_contig755.16449.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1686bp|location=Sequence derived from alignment at L-elsbetiae_contig755:246..1319+ (Laminarionema elsbetiae ELsaHSoW15)back to top |