mRNA_L-elsbetiae_contig7543.16442.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7543.16442.1 vs. uniprot
Match: A0A6H5KNU8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU8_9PHAE) HSP 1 Score: 317 bits (813), Expect = 1.230e-94 Identity = 245/342 (71.64%), Postives = 276/342 (80.70%), Query Frame = 1 Query: 1 LQHELNKRNMSLAKAEEKCLVLESRQEDFAHLLQGFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAICDDYEGRLQQQAANYEAQLSAVPR----GEGAAGS----SGAAEAEVGRLKSVIEDIEASRKSTSRKLKDLMDRYSETQDRLLATVENEKLKAENLEEKLDDCRVERDAECERLQHNIDSQKQQLDVKVATVKHLWEKVAAIRRVKAVGSEDLKAHLDEAVSARDSLSRLAEDQQEQIDRLRRRAKRKEEEITKTVLARLQTQDGSGSALIDEDELTLGVAGRGEDG-------RESLDSALGTTRGASAALRSQLADIK 981 ++ EL K+NMSLAKAEEKCLVLE+RQ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX QAANYEAQL+A+P+ G+ AG+ SG AE EV RLKS+IED+E+SRK T+R+L+D+M + S+ ++R LA VE EK +A+ EE L+DCR ERDAECERLQHNIDSQK+QLDVKVATVKHLWEKVAAIRRVKAVGSEDLKAHLDEAVSARDSLSRLAEDQQEQIDRLRRRAKRKEEEITKTVLARLQ Q+ SGS++ID+DE++LG A R+SLDSA GTTRGASAALRSQLADIK Sbjct: 2046 MKRELEKKNMSLAKAEEKCLVLEARQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAANYEAQLTALPKTEEDGDETAGAVVAASGGAETEVARLKSMIEDLESSRKMTARRLRDIMKKCSQNEERFLAAVETEKARADRFEEMLEDCRRERDAECERLQHNIDSQKEQLDVKVATVKHLWEKVAAIRRVKAVGSEDLKAHLDEAVSARDSLSRLAEDQQEQIDRLRRRAKRKEEEITKTVLARLQAQEASGSSVIDDDEMSLGDAXXXXXXXXXXXXXRDSLDSAAGTTRGASAALRSQLADIK 2387 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7543.16442.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7543.16442.1 >prot_L-elsbetiae_contig7543.16442.1 ID=prot_L-elsbetiae_contig7543.16442.1|Name=mRNA_L-elsbetiae_contig7543.16442.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=318bp MSLAKAEEKCLVLESRQEDFAHLLQGFREEKEKLLVELKRKREKTRAELKback to top mRNA from alignment at L-elsbetiae_contig7543:388..7985+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7543.16442.1 ID=mRNA_L-elsbetiae_contig7543.16442.1|Name=mRNA_L-elsbetiae_contig7543.16442.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7598bp|location=Sequence derived from alignment at L-elsbetiae_contig7543:388..7985+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7543:388..7985+ >mRNA_L-elsbetiae_contig7543.16442.1 ID=mRNA_L-elsbetiae_contig7543.16442.1|Name=mRNA_L-elsbetiae_contig7543.16442.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1908bp|location=Sequence derived from alignment at L-elsbetiae_contig7543:388..7985+ (Laminarionema elsbetiae ELsaHSoW15)back to top |