mRNA_L-elsbetiae_contig7537.16438.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig7537.16438.1
Unique NamemRNA_L-elsbetiae_contig7537.16438.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig7537.16438.1 vs. uniprot
Match: D7FS20_ECTSI (Subtilisin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS20_ECTSI)

HSP 1 Score: 328 bits (841), Expect = 1.150e-100
Identity = 162/221 (73.30%), Postives = 183/221 (82.81%), Query Frame = 1
Query:    1 FSSKGPTIDGRIKPDVLASGDPSWSAYADPAADTCEFSSRQGTSMSAPVVAGNGAMARQYFREGWFN-GAKNLTQGFDPSAALLKAVLINSATGMSFVGISPEPSVLDVTLSDPPDFHQGFGRVTMVNALNINGAVGLFFADWVEIREGESIGYE-----------DLRVTLVWADPPASVGSTSALIHDLDLVVIAQSTGKEYYPNGGDGADSVNNVEKV 627
            FSSKGPTIDGRIKPDV+A GDP+WSA AD   +TCEF S+ GTSMS P+VAGNGAMARQYFREGW+N G+KN + GFDPS ALLKAVLINSATGMSF G++P+   LDVTL+ PPD HQGFGRVTM+NALNIN  VG+FF DWVEIREGE+I Y+           DLR+TLVW DPPASVGST ALIHDLDLVVIA+STG EYYPNG + AD+VNNVEK+
Sbjct:  652 FSSKGPTIDGRIKPDVVAPGDPTWSAAADTTGETCEFGSQTGTSMSTPIVAGNGAMARQYFREGWYNTGSKNESLGFDPSGALLKAVLINSATGMSFAGVNPDSGTLDVTLTTPPDTHQGFGRVTMINALNINSTVGIFFEDWVEIREGETIDYDVSLYEDADTDKDLRITLVWTDPPASVGSTEALIHDLDLVVIAESTGTEYYPNGLEEADTVNNVEKI 872          
BLAST of mRNA_L-elsbetiae_contig7537.16438.1 vs. uniprot
Match: W7U2N5_9STRA (Subtilisin (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U2N5_9STRA)

HSP 1 Score: 161 bits (408), Expect = 1.700e-43
Identity = 97/224 (43.30%), Postives = 132/224 (58.93%), Query Frame = 1
Query:    1 FSSKGPTIDGRIKPDVLASGDPSWSAYADPAADTCEFSSRQGTSMSAPVVAGNGAMARQYFREGWF-NGAKNLTQGFDPSAALLKAVLINSATGMSFVGISPEPSVLDVTLSDPPDFHQGFGRVTMVNALNIN--GAV---GLFFADWVEIREGE---------SIGYEDLRVTLVWADPPASVGSTSALIHDLDLVVIAQSTGKEYYPNGGDGADSVNNVEKV 627
            FSS GPT DGRIKPD++  G    SA +     TC  + +QGTSM+ PV AG+ AM RQYF EGW+  G K    GF P+ ALLKA+LINSA  M+    +   ++L + L  PPD +QG+GR+ + + L I   GA     L+  +   I+E E         + G   +++TLVW DP  +  S + ++HDLDL+V +Q  G  Y+PNG   AD+VN VEKV
Sbjct:   55 FSSWGPTKDGRIKPDIVTPGRRLVSAAS---GATCGVTIKQGTSMACPVAAGSAAMVRQYFVEGWYPRGVKRAADGFVPTGALLKAMLINSAVPMAAFDFN-NGTLLPLGL--PPDVYQGYGRIKLADVLPIKSLGATTTPNLYVVNGASIKEEEKHVYKFSIPATGKSPVKITLVWIDPDTTASSATTVLHDLDLMVYSQKEGSSYFPNGRTNADNVNTVEKV 272          
BLAST of mRNA_L-elsbetiae_contig7537.16438.1 vs. uniprot
Match: K8ZC45_NANGC (Subtilisin n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8ZC45_NANGC)

HSP 1 Score: 160 bits (404), Expect = 1.100e-41
Identity = 97/224 (43.30%), Postives = 131/224 (58.48%), Query Frame = 1
Query:    1 FSSKGPTIDGRIKPDVLASGDPSWSAYADPAADTCEFSSRQGTSMSAPVVAGNGAMARQYFREGWF-NGAKNLTQGFDPSAALLKAVLINSATGMSFVGISPEPSVLDVTLSDPPDFHQGFGRVTMVNALNIN--GAV---GLFFADWVEIREGE---------SIGYEDLRVTLVWADPPASVGSTSALIHDLDLVVIAQSTGKEYYPNGGDGADSVNNVEKV 627
            FSS GPT DGRIKPD++  G    SA +     TC  + +QGTSM+ PV AG+ AM RQYF EGW+  G K    GF P+ ALLKA+LINSA  M+    +   ++L + L  PPD +QG GR+ + + L I   GA     L+  +   I+E E         + G   +++TLVW DP  +  S + ++HDLDL+V +Q  G  Y+PNG   AD+VN VEKV
Sbjct:  630 FSSWGPTKDGRIKPDIVTPGRRLVSAAS---GATCGVTIKQGTSMACPVAAGSAAMVRQYFVEGWYPRGVKRAADGFVPTGALLKAMLINSAVPMAAFDFN-NGTLLPLGL--PPDVYQGHGRIKLADVLPIKSLGATTTPNLYVVNGASIKEEEKHVYKFSIPATGKSPVKITLVWIDPDTTASSATTVLHDLDLMVYSQKEGSSYFPNGRTNADNVNTVEKV 847          
BLAST of mRNA_L-elsbetiae_contig7537.16438.1 vs. uniprot
Match: A0A4D9CUI1_9STRA (Subtilisin n=2 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CUI1_9STRA)

HSP 1 Score: 159 bits (402), Expect = 2.140e-41
Identity = 97/224 (43.30%), Postives = 130/224 (58.04%), Query Frame = 1
Query:    1 FSSKGPTIDGRIKPDVLASGDPSWSAYADPAADTCEFSSRQGTSMSAPVVAGNGAMARQYFREGWF-NGAKNLTQGFDPSAALLKAVLINSATGMSFVGISPEPSVLDVTLSDPPDFHQGFGRVTMVNALNIN--GAV---GLFFADWVEIREGE---------SIGYEDLRVTLVWADPPASVGSTSALIHDLDLVVIAQSTGKEYYPNGGDGADSVNNVEKV 627
            FSS GPT DGRIKPD++  G    SA +     TC  + +QGTSM+ PV AG+ AM RQYF EGW+  G K    GF P+ ALLKA+LINSA  M+    +   ++L + L  PPD +QG GR+ + + L I   GA     L+  +   I+E E         + G   +++TLVW DP     S + ++HDLDL+V +Q  G  Y+PNG   AD+VN VEKV
Sbjct:  631 FSSWGPTKDGRIKPDIVTPGRRLVSAAS---GATCGVTIKQGTSMACPVAAGSAAMVRQYFVEGWYPRGVKRAADGFVPTGALLKAMLINSAVPMAAFDFN-NGTLLPLGL--PPDVYQGHGRIKLADVLPIKSLGATTTPNLYVVNGASIKEEEKHVYKLSIPATGKSPVKITLVWIDPDTRASSATTVLHDLDLMVYSQKEGSSYFPNGRTNADNVNTVEKV 848          
BLAST of mRNA_L-elsbetiae_contig7537.16438.1 vs. uniprot
Match: A0A7S2LF32_9STRA (Subtilisin n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LF32_9STRA)

HSP 1 Score: 144 bits (363), Expect = 3.530e-36
Identity = 100/244 (40.98%), Postives = 129/244 (52.87%), Query Frame = 1
Query:    1 FSSKGPTIDGRIKPDVLASGDPSWSAYA--------DPAADTCE-------------FSSRQGTSMSAPVVAGNGAMARQYFREGWF-NGAKNLTQ-GFDPSAALLKAVLINSATGMSFVGISPEPSVLDVTLSDPPDFHQGFGRVTMVNALNINGA--VGLFFADWVEIREGESIGY----------EDLRVTLVWADPPASVGSTSALIHDLDLVVIAQSTGKEYYPNGGDGADSVNNVEKV 627
            FSS+GPT+DGRIKPDV+A G    SA A        DP  D                 + + GTSM+APVV+G  A+ RQYF EG++  GAKN T    +PS+ALLKA+LIN A  +   GI      L      P D +QG GRV M+ ++ + G   +     D V I   E   Y          +D+ VTLVW D P S G T  L++DLDL+V   +TG   YPNGG   D+ NNVE++
Sbjct:  565 FSSRGPTVDGRIKPDVVAPGYAILSAGARPGVLGECDPTTDVLPETQLPYSDEAGIGLTYKAGTSMAAPVVSGTAAILRQYFAEGYYPTGAKNATNVNTNPSSALLKAILINGAQDLK--GIDYYGEALPTA---PYDHNQGHGRVNMLTSMPLQGVNDISAVVHDRVRIDNDEVHSYTLQVTEQCCADDVSVTLVWTDHPGSPGCTQCLVNDLDLLVTNDNTGAVSYPNGGMERDAKNNVERI 803          
BLAST of mRNA_L-elsbetiae_contig7537.16438.1 vs. uniprot
Match: A0A4D9D243_9STRA (Subtilisin n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D243_9STRA)

HSP 1 Score: 144 bits (363), Expect = 3.610e-36
Identity = 94/233 (40.34%), Postives = 124/233 (53.22%), Query Frame = 1
Query:    1 FSSKGPTIDGRIKPDVLASGDPSWSAYADPAAD--TCEFSSRQGTSMSAPVVAGNGAMARQYFREGWFNGAKNLT----------QGFDPSAALLKAVLINSATGMSFVGISPEPSVLDVTLSDPPDFHQGFGRVTMVNALNINGAVGLFFADWVEIREGESIGYE------------DLRVTLVWADPPASVGSTSALIHDLDLVVIAQSTGKEYYPNGGDGADSVNNVEKV 627
            FSS+GPT DGR+KPD+++ G   +SA +    +  TC +    GTSM+AP+VAG  A+ RQYF+EG +  A                  PSA LLKA+ +NSA  +  + +  E     V L  PPD  QG GR+ +   L+  G   LFFAD   +  G+S  Y              L+VTL W DPP S  +   L+HDLDL V+  S G  +YPNG  G DS NNVEK+
Sbjct:  422 FSSRGPTKDGRLKPDIVSPGSYIYSARSAGYNNGGTCSYVGMAGTSMAAPLVAGAAALIRQYFKEGHYYAALRARGECGPPYQCEDVIQPSAPLLKALFVNSAVAVKALRLEDEL----VALYHPPDLAQGHGRIKIDAVLDFYGHFSLFFADKQSLASGKSRTYYFQIAAASNASSVPLQVTLCWIDPPNSFTAQKQLLHDLDLHVLDPS-GVRFYPNGLPGPDSKNNVEKI 649          
BLAST of mRNA_L-elsbetiae_contig7537.16438.1 vs. uniprot
Match: A0A835Z5P2_9STRA (Subtilisin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5P2_9STRA)

HSP 1 Score: 144 bits (363), Expect = 3.670e-36
Identity = 94/236 (39.83%), Postives = 134/236 (56.78%), Query Frame = 1
Query:    1 FSSKGPTI-DGRIKPDVLASGDPSWSAYA------------DPAADTCEFSSRQGTSMSAPVVAGNGAMARQYFREGWF-NGAKNLTQGFDPSAALLKAVLINSATGMSFVGISPEPSVLDVTLSDPPDFHQGFGRVTMVNALNINGAVGLFFADWVEIREGESI---------GYE-DLRVTLVWADPPASVGSTSALIHDLDLVVIAQSTGKE---YYPNGGDGADSVNNVEKV 627
            FSS+GPT  DGRIKPD+LA G  + SA A                  C  ++  GTSM+APVV+   A+ RQYF +GW+ +G  N +  ++PS AL+KA+L+N A  M+      E     VTL   PD +QG+GR+ +  AL+I G+V L   D V +R    +         GY+ D R T+V+ +PP +VG+ S +++DLDL+V A  +      +YPNGG   D+VN VE+V
Sbjct:  604 FSSQGPTPGDGRIKPDILAPGYHTVSAEAAXXXXXXXXXXXXXXXXXCRVAAMAGTSMAAPVVSAAAALMRQYFVQGWYPSGRPNPSDVYNPSGALVKALLVNGAAPMARYRGRAE----SVTLGAGPDGYQGWGRIQLDAALDIGGSVDLHVVDRVYVRAANFVATYSYTVRDGYDGDFRATMVFVEPPGAVGAVSPVLNDLDLIVTAYDSAARPTVFYPNGGAAPDAVNTVERV 835          
BLAST of mRNA_L-elsbetiae_contig7537.16438.1 vs. uniprot
Match: W7TM23_9STRA (Subtilisin n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TM23_9STRA)

HSP 1 Score: 143 bits (361), Expect = 6.880e-36
Identity = 95/233 (40.77%), Postives = 124/233 (53.22%), Query Frame = 1
Query:    1 FSSKGPTIDGRIKPDVLASGDPSWSAYADPAAD--TCEFSSRQGTSMSAPVVAGNGAMARQYFREGWFNGAKNLT----------QGFDPSAALLKAVLINSATGMSFVGISPEPSVLDVTLSDPPDFHQGFGRVTMVNALNINGAVGLFFADWVEIREGESIGYE------------DLRVTLVWADPPASVGSTSALIHDLDLVVIAQSTGKEYYPNGGDGADSVNNVEKV 627
            FSS+GPT DGR+KPD+++ G   +SA +    +  TC + +  GTSM+APVVAG  A+ RQYF+EG +  A                  PSA LLKA+ +NSA  +  + +  E     V L  PPD  QG GR+ +   L+  G   LFFAD   +  GES  Y              L+VTL W DPP S  +   L+HDLDL V+  S G  +YPNG  G D  NNVEK+
Sbjct:  749 FSSRGPTKDGRLKPDIVSPGSYIYSARSAGYNNGGTCSYVAMAGTSMAAPVVAGAAALIRQYFKEGHYYAALRARGECGPPYQCEDVIQPSAPLLKALFVNSAVPVKALRLEDEL----VALYHPPDLAQGHGRIKIDAVLDFYGHFSLFFADKQSLASGESRTYYFQIAAASNASSVPLQVTLCWIDPPNSFTAQKQLLHDLDLHVLDPS-GVLFYPNGLPGPDRKNNVEKI 976          
BLAST of mRNA_L-elsbetiae_contig7537.16438.1 vs. uniprot
Match: A0A388K136_CHABU (Peptidase_S8 domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388K136_CHABU)

HSP 1 Score: 143 bits (360), Expect = 8.910e-36
Identity = 98/242 (40.50%), Postives = 126/242 (52.07%), Query Frame = 1
Query:    1 FSSKGPTIDGRIKPDVLASGDPSWSAYADPAADTCEFSSRQGTSMSAPVVAGNGAMARQYFREG-WFNGAKNLTQGFDPSAALLKAVLINSATGM----------SFVGISPEPSVLDVTLSDPPDFHQGFGRVTMVNAL-----------NINGAVGLFF----ADWVEIREGESIGYE-------DLRVTLVWADPPASVGSTSALIHDLDLVVIAQSTGKEYYPNGGDGADSVNNVEKV 627
            FSSKGPT+DGRIKPDV+A G   WSA++    D+C  +S QGTS +A VV G  A+ RQYF+EG +  GA      F+PS AL+KA +I+ A G+          SF    P       T+S P    +G+G V +   L           N  G   +F      D   I  GE   Y         LR TLVW DPPA +G+ + ++HDLDL VI  S GK  YPNG    D +NNVE++
Sbjct:  617 FSSKGPTLDGRIKPDVVAPGMHMWSAHSSNGTDSCRLTSSQGTSTAAAVVGGVAALVRQYFQEGRYLTGAPVARDAFEPSGALVKACIIHGARGLFGYIDSQRGNSFRKFPP-------TISFPNQL-EGWGLVRIDRVLLSPLPAIKTPPNHQGPQAMFMKSGRVDGAVILPGEVHSYSFVLRRGAPLRATLVWMDPPAILGALTPVLHDLDLAVIGPS-GKTTYPNGLSAPDRLNNVERI 849          
BLAST of mRNA_L-elsbetiae_contig7537.16438.1 vs. uniprot
Match: I0ZAK6_COCSC (Subtilisin-like protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0ZAK6_COCSC)

HSP 1 Score: 142 bits (359), Expect = 1.220e-35
Identity = 92/224 (41.07%), Postives = 128/224 (57.14%), Query Frame = 1
Query:    1 FSSKGPTIDGRIKPDVLASGDP-SWSAYADPAADTCEFSSRQGTSMSAPVVAGNGAMARQYFREGWF-NGAKNLTQGFDPSAALLKAVLINSATGMSFVGISPEPSVL--DVTLSDPPDFHQGFGRVTMVNALNINGAVGLFFADWVEIREGESIGYED----------LRVTLVWADPPASVGSTSALIHDLDLVVIAQS-TGKEYYPNGGDGADSVNNVEKV 627
            FSS GPT+DGRI PD++A+G   S S+     + TC   S +GTSM+ P+VAG   + RQYF EGW+ +GA N+++ + PS  L+KAVL+  +  M   GI+P+ +     V L  PP   QGFG   +  +L I      +    V+ +   + G  D          LRVTLVWADPPA+  +   L++DLDLVV A S +G+  Y NG    D +NNVE+V
Sbjct:  436 FSSIGPTLDGRINPDIIATGTTISTSSARQANSFTCSLDSMRGTSMATPIVAGGLLLIRQYFTEGWYPSGAPNISRSYTPSGPLMKAVLLGGSKAME--GITPDSNAQYDGVPLDPPPSMRQGFGAAHLGRSLPIASNPSGWSMQVVDRKPMAAKGQVDKYCLVSTVGTLRVTLVWADPPAAQAAAVQLVNDLDLVVHADSLSGRSLYGNGA--LDRLNNVEQV 655          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7537.16438.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FS20_ECTSI1.150e-10073.30Subtilisin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7F... [more]
W7U2N5_9STRA1.700e-4343.30Subtilisin (Fragment) n=1 Tax=Nannochloropsis gadi... [more]
K8ZC45_NANGC1.100e-4143.30Subtilisin n=2 Tax=Nannochloropsis gaditana TaxID=... [more]
A0A4D9CUI1_9STRA2.140e-4143.30Subtilisin n=2 Tax=Nannochloropsis salina CCMP1776... [more]
A0A7S2LF32_9STRA3.530e-3640.98Subtilisin n=1 Tax=Leptocylindrus danicus TaxID=16... [more]
A0A4D9D243_9STRA3.610e-3640.34Subtilisin n=1 Tax=Nannochloropsis salina CCMP1776... [more]
A0A835Z5P2_9STRA3.670e-3639.83Subtilisin n=1 Tax=Tribonema minus TaxID=303371 Re... [more]
W7TM23_9STRA6.880e-3640.77Subtilisin n=1 Tax=Nannochloropsis gaditana TaxID=... [more]
A0A388K136_CHABU8.910e-3640.50Peptidase_S8 domain-containing protein n=1 Tax=Cha... [more]
I0ZAK6_COCSC1.220e-3541.07Subtilisin-like protein n=1 Tax=Coccomyxa subellip... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7537contigL-elsbetiae_contig7537:2..1939 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score148.7
Seed ortholog evalue3.1e-33
Seed eggNOG ortholog248742.XP_005652219.1
Preferred nameSPPL2A
KEGG koko:K09596,ko:K09597,ko:K14212
Hectar predicted targeting categoryother localisation
GOsGO:0000323,GO:0001959,GO:0002682,GO:0003674,GO:0003824,GO:0004175,GO:0004190,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005764,GO:0005765,GO:0005768,GO:0005770,GO:0005773,GO:0005774,GO:0005783,GO:0005789,GO:0005798,GO:0005813,GO:0005815,GO:0005856,GO:0005886,GO:0006508,GO:0006509,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0009966,GO:0010008,GO:0010646,GO:0010803,GO:0012505,GO:0015629,GO:0015630,GO:0016020,GO:0016021,GO:0016787,GO:0019538,GO:0023051,GO:0030176,GO:0030660,GO:0031090,GO:0031224,GO:0031227,GO:0031293,GO:0031410,GO:0031902,GO:0031974,GO:0031981,GO:0031982,GO:0031984,GO:0033619,GO:0042175,GO:0042500,GO:0042802,GO:0042803,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044238,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044430,GO:0044432,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0046983,GO:0048583,GO:0050776,GO:0050789,GO:0050794,GO:0060759,GO:0065007,GO:0070001,GO:0070011,GO:0070013,GO:0071458,GO:0071556,GO:0071704,GO:0071944,GO:0097708,GO:0098552,GO:0098553,GO:0098554,GO:0098562,GO:0098588,GO:0098805,GO:0098827,GO:0098852,GO:0140096,GO:1901564
EggNOG free text desc.aspartic-type endopeptidase activity
EggNOG OGsKOG2442@2759,KOG2443@1
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002
Exons4
Model size627
Cds size627
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7537.16438.1prot_L-elsbetiae_contig7537.16438.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig7537 2..1939 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816837.9062386-CDS-L-elsbetiae_contig7537:1..1661622816837.9062386-CDS-L-elsbetiae_contig7537:1..166Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7537 2..166 -
1691683851.5911577-CDS-L-elsbetiae_contig7537:1..1661691683851.5911577-CDS-L-elsbetiae_contig7537:1..166Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7537 2..166 -
1622816837.920069-CDS-L-elsbetiae_contig7537:464..5721622816837.920069-CDS-L-elsbetiae_contig7537:464..572Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7537 465..572 -
1691683851.6049995-CDS-L-elsbetiae_contig7537:464..5721691683851.6049995-CDS-L-elsbetiae_contig7537:464..572Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7537 465..572 -
1622816837.9333344-CDS-L-elsbetiae_contig7537:782..10131622816837.9333344-CDS-L-elsbetiae_contig7537:782..1013Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7537 783..1013 -
1691683851.6139984-CDS-L-elsbetiae_contig7537:782..10131691683851.6139984-CDS-L-elsbetiae_contig7537:782..1013Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7537 783..1013 -
1622816837.9434545-CDS-L-elsbetiae_contig7537:1816..19391622816837.9434545-CDS-L-elsbetiae_contig7537:1816..1939Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7537 1817..1939 -
1691683851.6223392-CDS-L-elsbetiae_contig7537:1816..19391691683851.6223392-CDS-L-elsbetiae_contig7537:1816..1939Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7537 1817..1939 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig7537.16438.1

>prot_L-elsbetiae_contig7537.16438.1 ID=prot_L-elsbetiae_contig7537.16438.1|Name=mRNA_L-elsbetiae_contig7537.16438.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=209bp
FSSKGPTIDGRIKPDVLASGDPSWSAYADPAADTCEFSSRQGTSMSAPVV
AGNGAMARQYFREGWFNGAKNLTQGFDPSAALLKAVLINSATGMSFVGIS
PEPSVLDVTLSDPPDFHQGFGRVTMVNALNINGAVGLFFADWVEIREGES
IGYEDLRVTLVWADPPASVGSTSALIHDLDLVVIAQSTGKEYYPNGGDGA
DSVNNVEKV
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mRNA from alignment at L-elsbetiae_contig7537:2..1939-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig7537.16438.1 ID=mRNA_L-elsbetiae_contig7537.16438.1|Name=mRNA_L-elsbetiae_contig7537.16438.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1938bp|location=Sequence derived from alignment at L-elsbetiae_contig7537:2..1939- (Laminarionema elsbetiae ELsaHSoW15)
TTCTCCTCGAAGGGTCCCACCATCGACGGGCGCATCAAGCCGGACGTGTT GGCTTCGGGGGACCCGAGCTGGTCGGCGTACGCTGATCCCGCGGCAGACA CGTGCGAGTTCAGTAGCCGGCAGGTGAGCTCAGCGATGTTGTTTACCGAT TCGCTGTTTTGGGCCAAAGAGCGAACGCGACTTTTTTCATTGCAGCTCTG CTTGGTGGTTTCGTGCTGTGTGCGCCTTGTGTGCCTTCGCCGGCTCGTGG TGATTGTTGCTGTGCGTGTGTCTTGTACTCCTTTGGAAGTCATTTGTGCC CCCTCGTGACTAGTGTTCCAAGGGGTCACCAGGAGTGCAGGGTAGGACGA ACAACCACCCCCCACCACCCCCCCTCTCCCCCCTTTTTTTCAGGCCTTAT CGAAGTTTCCGTTACACTTCATGTATGTAGGAATTAGTGTAGTCATACTC TTGTTAACACCCCCCCTGCAAAGTTGGTATCAAAGGGGTGGTGGTAAGCA GCCATGACCAAATCCTGTAGAACAACAACGTAGAAGTACGAAGTACGGGT TTAGTACAATGTACAAAATCGTACTCCTATGTAACCCCCCCCCCCCCCTT CCCCTCCGAATTCGGGCCAATTAATGTTTGGAGGTGTGCATCCGTCCCTG CAATCCTGGTGACCCCTCGAGTGTTCTCTGTTCAACAAAGTAAGTTGAGA CGTGACGACGGTAGATGGGCAGTATTTCAAGCACCAGCTGGATCATGCCA CCTACCTGTCCCGCGCTTTTCTCCTCCGGATGAGCTCACAAGCACGCCAC ATCTTGGGGTTCTATCCGACCCGCGAAACACCGGCGTGGCAAAGCGTCTG TTGATTGCCGCGCCCCCCCGCCCCCGCCCCCTCTACAACAACGTCACACG CGAACGTAAACATCCGTGAATTCCAGGGGACGAGCATGTCTGCGCCCGTG GTGGCGGGCAACGGTGCCATGGCTCGGCAGTACTTCCGCGAGGGATGGTT CAACGGTGCCAAGAACCTGACCCAGGGCTTCGACCCCTCGGCGGCGCTGC TGAAGGCCGTGCTCATTAACTCGGCGACCGGCATGTCTTTCGTCGGGATC AGCCCGGAGCCCAGCGTGCTGGACGTGACGCTCTCAGACCCCCCGGATTT TCACCAGGTGTGAGGGCGTAGACAGGACCACAGGGGGGTACGATGGCGTG ACTGGGGAGAATGCACCGTAAATGTAGCTGTAGGGATGAGGCATTTTGGG TGGTTGTAGAGCAATTCTCACGGATCAGACTCTGGTTGGGGGCAGGAATC GCAGCTTCAGCTCCTTCCTCGCCCCCCGGTCAGTTGGTAATGATCTGTTC ACACTTCTGCTCTTCAGGGATTCGGCCGGGTGACAATGGTCAACGCGCTA AACATCAACGGCGCGGTGGGGCTGTTTTTCGCAGACTGGGTGGAAATCCG AGAGGGGGAATCGATCGGGTACGAGGTGTCGCTTTACGAGAGCGCCGATC TTGACAAGGTACGCACGCACTCCAATCCAAGTTATCTTTCTATTTTTTTG AATTCATCGCCGCAGGCAGTGGCTCAGGTCGGTCAGCCCTACGACAGTAG TACTGCGGATAAGCTGTGTACGTGCTCATGAAAGCTACAAACAGCACCCG AAAACTTTCTGCTGACTTTTTTAAAAATAAAACAAAAAATCAAAGATGGA ACCTAACCCATACTAGAGCAAAGACTCGATTTTTTTGTTGTCGCCCGTTG TCTGCGTACAACGTGGACACCAGGACCTGCGCGTGACTCTTGTGTGGGCG GACCCCCCCGCGTCCGTGGGGTCCACGTCGGCGCTGATCCACGACCTGGA CCTCGTGGTGATCGCACAGTCCACGGGCAAGGAGTACTACCCCAACGGAG GGGACGGGGCGGACAGCGTGAACAACGTGGAGAAGGTG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig7537:2..1939-

>mRNA_L-elsbetiae_contig7537.16438.1 ID=mRNA_L-elsbetiae_contig7537.16438.1|Name=mRNA_L-elsbetiae_contig7537.16438.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1254bp|location=Sequence derived from alignment at L-elsbetiae_contig7537:2..1939- (Laminarionema elsbetiae ELsaHSoW15)
TTCTCCTCGAAGGGTCCCACCATCGACGGGCGCATCAAGCCGGACGTGTT
GGCTTCGGGGGACCCGAGCTGGTCGGCGTACGCTGATCCCGCGGCAGACA
CGTGCGAGTTCAGTAGCCGGCAGTTCTCCTCGAAGGGTCCCACCATCGAC
GGGCGCATCAAGCCGGACGTGTTGGCTTCGGGGGACCCGAGCTGGTCGGC
GTACGCTGATCCCGCGGCAGACACGTGCGAGTTCAGTAGCCGGCAGGGGA
CGAGCATGTCTGCGCCCGTGGTGGCGGGCAACGGTGCCATGGCTCGGCAG
TACTTCCGCGAGGGATGGTTCAACGGTGCCAAGAACCTGACCCAGGGCTT
CGACCCCTCGGCGGCGCTGCTGAAGGCCGTGCTCATTAACTCGGCGACCG
GCATGTCTTTCGTCGGGATCAGCCCGGAGCCCAGCGTGCTGGACGTGACG
CTCTCAGACCCCCCGGATTTTCACCAGGGGACGAGCATGTCTGCGCCCGT
GGTGGCGGGCAACGGTGCCATGGCTCGGCAGTACTTCCGCGAGGGATGGT
TCAACGGTGCCAAGAACCTGACCCAGGGCTTCGACCCCTCGGCGGCGCTG
CTGAAGGCCGTGCTCATTAACTCGGCGACCGGCATGTCTTTCGTCGGGAT
CAGCCCGGAGCCCAGCGTGCTGGACGTGACGCTCTCAGACCCCCCGGATT
TTCACCAGGGATTCGGCCGGGTGACAATGGTCAACGCGCTAAACATCAAC
GGCGCGGTGGGGCTGTTTTTCGCAGACTGGGTGGAAATCCGAGAGGGGGA
ATCGATCGGGTACGAGGGATTCGGCCGGGTGACAATGGTCAACGCGCTAA
ACATCAACGGCGCGGTGGGGCTGTTTTTCGCAGACTGGGTGGAAATCCGA
GAGGGGGAATCGATCGGGTACGAGGACCTGCGCGTGACTCTTGTGTGGGC
GGACCCCCCCGCGTCCGTGGGGTCCACGTCGGCGCTGATCCACGACCTGG
ACCTCGTGGTGATCGCACAGTCCACGGGCAAGGAGTACTACCCCAACGGA
GGGGACGGGGCGGACAGCGTGAACAACGTGGAGAAGGTGGACCTGCGCGT
GACTCTTGTGTGGGCGGACCCCCCCGCGTCCGTGGGGTCCACGTCGGCGC
TGATCCACGACCTGGACCTCGTGGTGATCGCACAGTCCACGGGCAAGGAG
TACTACCCCAACGGAGGGGACGGGGCGGACAGCGTGAACAACGTGGAGAA
GGTG
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