mRNA_L-elsbetiae_contig7521.16412.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig7521.16412.1
Unique NamemRNA_L-elsbetiae_contig7521.16412.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig7521.16412.1 vs. uniprot
Match: D8LLB6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLB6_ECTSI)

HSP 1 Score: 362 bits (929), Expect = 1.200e-123
Identity = 172/181 (95.03%), Postives = 179/181 (98.90%), Query Frame = 1 
Query:    1 PILNKMTDEQEADKVVWTPSTMIERLGREIDNEDSIYYWCAKNNIPVFCPALTDGSIGDMIYFHKYKRPEFILDISGDVKRINDIAVRAPCTGMIIVGGGLVKHHVCNANLMRNGADFAVFINTGQEYDGSDSGARPDEAVSWGKIKLDASPVKVYAEATLVLPLLVAQTFAKDFHEQKMA 543
            PILNKMTDEQEADKVVWTPSTMIERLGREIDNE+SIYYWCAKN+IPVFCPALTDGSIGDMIYFHKYKRPEFILDISGDVKRINDIAVRAPCTGMIIVGGG+VKHHVCNANLMRNGADFAVF+NTGQEYDGSDSGARPDEAVSWGKIKLDA PVK+YAEATLVLPLLVAQTFAKDFH+Q+ A
Sbjct:  196 PILNKMTDEQEADKVVWTPSTMIERLGREIDNEESIYYWCAKNDIPVFCPALTDGSIGDMIYFHKYKRPEFILDISGDVKRINDIAVRAPCTGMIIVGGGVVKHHVCNANLMRNGADFAVFMNTGQEYDGSDSGARPDEAVSWGKIKLDAKPVKIYAEATLVLPLLVAQTFAKDFHDQRAA 376
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BLAST of mRNA_L-elsbetiae_contig7521.16412.1 vs. uniprot
Match: A0A835YZK5_9STRA (DHS-like NAD/FAD-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZK5_9STRA)

HSP 1 Score: 296 bits (757), Expect = 2.980e-97
Identity = 135/181 (74.59%), Postives = 160/181 (88.40%), Query Frame = 1 
Query:    1 PILNKMTDEQEADKVVWTPSTMIERLGREIDNEDSIYYWCAKNNIPVFCPALTDGSIGDMIYFHKYKRPEFILDISGDVKRINDIAVRAPCTGMIIVGGGLVKHHVCNANLMRNGADFAVFINTGQEYDGSDSGARPDEAVSWGKIKLDASPVKVYAEATLVLPLLVAQTFAKDFHEQKMA 543
            PIL  MTDEQ     VWTPS+MI RLG+EI+NEDS+YYWC K+ IPVFCPALTDGSIGDMIYFHKYKRPEF+LD++GD+K INDIAVRA  TGMI++GGG+VKHH CNANLMRNGA+F+VFINTG ++DGSDSGA+PDEA+SWGK+K+D+ PVK+ AEATLV PL+VA+TFAKDFH  + A
Sbjct:  197 PILMAMTDEQAQLGRVWTPSSMIARLGQEINNEDSVYYWCWKHGIPVFCPALTDGSIGDMIYFHKYKRPEFMLDVTGDIKSINDIAVRAHATGMIVLGGGVVKHHTCNANLMRNGAEFSVFINTGSDFDGSDSGAKPDEAISWGKVKIDSRPVKLQAEATLVFPLIVAETFAKDFHASRTA 377
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BLAST of mRNA_L-elsbetiae_contig7521.16412.1 vs. uniprot
Match: A0A812WM17_SYMMI (Hypothetical protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812WM17_SYMMI)

HSP 1 Score: 289 bits (740), Expect = 1.570e-96
Identity = 129/174 (74.14%), Postives = 156/174 (89.66%), Query Frame = 1 
Query:    1 PILNKMTDEQEADKVVWTPSTMIERLGREIDNEDSIYYWCAKNNIPVFCPALTDGSIGDMIYFHKYKRPEFILDISGDVKRINDIAVRAPCTGMIIVGGGLVKHHVCNANLMRNGADFAVFINTGQEYDGSDSGARPDEAVSWGKIKLDASPVKVYAEATLVLPLLVAQTFAKD 522
            PIL  MT+EQ AD V WTPS +I RLG+EIDNEDS+YYWC KN+IPVFCPA+TDGS+GDM+YFH Y+RPEF++DI GD++RINDIAVRA CTGM+I+GGGL+KHH CNANLMRNGA+F+V+INTG E+DGSDSGA PDEAVSWGKIK+ ++PVKV A+ATLV PL+V+QTF K+
Sbjct:   79 PILEAMTNEQVADNVRWTPSQIIRRLGQEIDNEDSVYYWCYKNDIPVFCPAITDGSLGDMMYFHSYRRPEFLVDIVGDIRRINDIAVRAACTGMVILGGGLIKHHTCNANLMRNGAEFSVYINTGHEFDGSDSGASPDEAVSWGKIKMTSNPVKVSADATLVFPLIVSQTFVKE 252
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BLAST of mRNA_L-elsbetiae_contig7521.16412.1 vs. uniprot
Match: A0A7S2CC55_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CC55_9STRA)

HSP 1 Score: 282 bits (721), Expect = 3.630e-94
Identity = 131/174 (75.29%), Postives = 150/174 (86.21%), Query Frame = 1 
Query:    1 PILNKMTDEQEADKVVWTPSTMIERLGREIDNEDSIYYWCAKNNIPVFCPALTDGSIGDMIYFHKYKRPEFILDISGDVKRINDIAVRAPCTGMIIVGGGLVKHHVCNANLMRNGADFAVFINTGQEYDGSDSGARPDEAVSWGKIKLDASPVKVYAEATLVLPLLVAQTFAKD 522
            PILN M DEQE D  +WTPSTMI RLG+EI+NEDS+YYW  KNNIPV+CPA+TDGS+GDMIYF  YKRP FILDI+ D++ IND AVRA  TGMII+GGGLVKHH CNANLMRNGA F+VFINTGQ +DGSDSGA PDEA+SWGKIK+DA PVKV  +ATLV PL+V+QTFAK+
Sbjct:   33 PILNSMMDEQEQDGTIWTPSTMIARLGKEINNEDSVYYWAWKNNIPVYCPAITDGSVGDMIYFFSYKRPGFILDIARDIRGINDEAVRAHATGMIILGGGLVKHHTCNANLMRNGASFSVFINTGQAFDGSDSGAAPDEAISWGKIKIDARPVKVSCDATLVFPLIVSQTFAKE 206
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BLAST of mRNA_L-elsbetiae_contig7521.16412.1 vs. uniprot
Match: A0A485K965_9STRA (Aste57867_1638 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K965_9STRA)

HSP 1 Score: 284 bits (726), Expect = 7.250e-93
Identity = 127/181 (70.17%), Postives = 158/181 (87.29%), Query Frame = 1 
Query:    1 PILNKMTDEQEADKVVWTPSTMIERLGREIDNEDSIYYWCAKNNIPVFCPALTDGSIGDMIYFHKYKRPEFILDISGDVKRINDIAVRAPCTGMIIVGGGLVKHHVCNANLMRNGADFAVFINTGQEYDGSDSGARPDEAVSWGKIKLDASPVKVYAEATLVLPLLVAQTFAKDFHEQKMA 543
            PIL+ M +EQ+    VW+PSTMI RLG+EI++E+S+YYWC KNNIPVFCPALTDGSIGDMIYFH Y++   +LDI  D++R+ND A+RA  TG+II+GGG+VKHH+ NANLMRNGADFAVF+NTGQE+DGSD+GARPDEA+SWGK++L+++P KVYA+ATLV PLLVA+TFAKDFH  K A
Sbjct:  187 PILDAMLEEQQTQGTVWSPSTMIHRLGKEINDENSVYYWCYKNNIPVFCPALTDGSIGDMIYFHSYRKEGLVLDIVSDIRRVNDHAIRAKKTGVIILGGGVVKHHILNANLMRNGADFAVFVNTGQEFDGSDAGARPDEAISWGKLRLNSTPAKVYADATLVFPLLVAETFAKDFHAAKKA 367
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BLAST of mRNA_L-elsbetiae_contig7521.16412.1 vs. uniprot
Match: A0A7S1BPC0_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BPC0_9STRA)

HSP 1 Score: 284 bits (727), Expect = 1.770e-92
Identity = 129/179 (72.07%), Postives = 155/179 (86.59%), Query Frame = 1 
Query:    1 PILNKMTDEQEADKVVWTPSTMIERLGREIDNEDSIYYWCAKNNIPVFCPALTDGSIGDMIYFHKYKRPEFILDISGDVKRINDIAVRAPCTGMIIVGGGLVKHHVCNANLMRNGADFAVFINTGQEYDGSDSGARPDEAVSWGKIKLDASPVKVYAEATLVLPLLVAQTFAKDFHEQK 537
            P+LNKM DEQ+   + WTPST+IER+G EI+NE+S+ YW AKN IPVFCPALTDGSIGDMIYFH YKR  F+LDI GD+++IND AVR+  TGMI++GGGL+KHH CNANLMRNGADF+VFINTGQE+DGSDSGARPDEA+SWGKIK+ A PVKVY++AT+  PL+V+QTFAK+  E K
Sbjct:  228 PLLNKMHDEQDKTGIFWTPSTIIERMGLEINNEESVLYWAAKNKIPVFCPALTDGSIGDMIYFHSYKRSGFVLDIVGDIRKINDCAVRSHSTGMILLGGGLIKHHTCNANLMRNGADFSVFINTGQEFDGSDSGARPDEAISWGKIKITAKPVKVYSDATISFPLIVSQTFAKNVEEWK 406
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BLAST of mRNA_L-elsbetiae_contig7521.16412.1 vs. uniprot
Match: K3WH50_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WH50_GLOUD)

HSP 1 Score: 282 bits (721), Expect = 5.460e-92
Identity = 123/179 (68.72%), Postives = 156/179 (87.15%), Query Frame = 1 
Query:    1 PILNKMTDEQEADKVVWTPSTMIERLGREIDNEDSIYYWCAKNNIPVFCPALTDGSIGDMIYFHKYKRPEFILDISGDVKRINDIAVRAPCTGMIIVGGGLVKHHVCNANLMRNGADFAVFINTGQEYDGSDSGARPDEAVSWGKIKLDASPVKVYAEATLVLPLLVAQTFAKDFHEQK 537
            P+L+ M DEQ      W+PS MI R+G+EI+NEDS+YYWC KN+IPVFCPALTDGSIGDM+YFH Y++   ILDI+ D++RIND+A+RAP TG+II+GGG+VKHH+ NANLMRNGADF VF+NTGQE+DGSD+GARPDEA+SWGK++L + PVK+Y+EATLV PL+VA+TFAKDFH ++
Sbjct:  191 PVLDSMLDEQLTQGTTWSPSKMIHRMGKEINNEDSVYYWCYKNDIPVFCPALTDGSIGDMMYFHSYRKEGLILDIASDIRRINDLAIRAPKTGVIILGGGVVKHHILNANLMRNGADFGVFVNTGQEFDGSDAGARPDEAISWGKMRLGSKPVKLYSEATLVFPLIVAETFAKDFHREQ 369
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BLAST of mRNA_L-elsbetiae_contig7521.16412.1 vs. uniprot
Match: A0A2R5G8G8_9STRA (Deoxyhypusine synthase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G8G8_9STRA)

HSP 1 Score: 281 bits (719), Expect = 6.300e-92
Identity = 126/179 (70.39%), Postives = 153/179 (85.47%), Query Frame = 1 
Query:    1 PILNKMTDEQEADKVVWTPSTMIERLGREIDNEDSIYYWCAKNNIPVFCPALTDGSIGDMIYFHKYKRPEFILDISGDVKRINDIAVRAPCTGMIIVGGGLVKHHVCNANLMRNGADFAVFINTGQEYDGSDSGARPDEAVSWGKIKLDASPVKVYAEATLVLPLLVAQTFAKDFHEQK 537
            PIL+ M  EQ+ D + WTPS MI RLG+EIDN +S+YYW  KN+IPVFCPA+TDGSIGDM+YF  YK  +F+LDI GD++ +ND+A +AP TGM+I+GGGLVKHHVCNANLMRNGADF+VFINT  E+DGSDSGARPDEA+SWGKI+ +A+PVK+Y E TLV PL+VAQTFAK +HEQK
Sbjct:  178 PILDVMYKEQKEDGITWTPSKMIHRLGKEIDNPESVYYWAYKNDIPVFCPAITDGSIGDMLYFRSYKNEDFVLDIVGDIRAVNDLACKAPKTGMVILGGGLVKHHVCNANLMRNGADFSVFINTASEFDGSDSGARPDEAISWGKIRREATPVKLYCEVTLVFPLIVAQTFAKYYHEQK 356
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BLAST of mRNA_L-elsbetiae_contig7521.16412.1 vs. uniprot
Match: A0A024UHC2_9STRA (Deoxyhypusine synthase n=6 Tax=Aphanomyces TaxID=100860 RepID=A0A024UHC2_9STRA)

HSP 1 Score: 280 bits (717), Expect = 1.230e-91
Identity = 128/175 (73.14%), Postives = 154/175 (88.00%), Query Frame = 1 
Query:    1 PILNKMTDEQEADKVVWTPSTMIERLGREIDNEDSIYYWCAKNNIPVFCPALTDGSIGDMIYFHKYKRPEFILDISGDVKRINDIAVRAPCTGMIIVGGGLVKHHVCNANLMRNGADFAVFINTGQEYDGSDSGARPDEAVSWGKIKLDASPVKVYAEATLVLPLLVAQTFAKDF 525
            PIL+ M +EQ     VW+PSTMI RLG+EI++EDS+YYWC KNNIPVFCPALTDGSIGDMIYFH Y++   +LDI  D++R+ND A+RA  TG+II+GGG+VKHH+ NANLMRNGADFAVF+NTGQE+DGSD+GARPDEAVSWGK++L+A+P KVYA+ATLV PLLVAQTFAKDF
Sbjct:  186 PILDAMLEEQLTQGTVWSPSTMIHRLGKEINHEDSVYYWCYKNNIPVFCPALTDGSIGDMIYFHSYRKEGLVLDIVSDIRRMNDHAIRAKKTGVIILGGGVVKHHILNANLMRNGADFAVFVNTGQEFDGSDAGARPDEAVSWGKLRLNATPAKVYADATLVFPLLVAQTFAKDF 360
[Close]
BLAST of mRNA_L-elsbetiae_contig7521.16412.1 vs. uniprot
Match: A0A6G0XW26_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XW26_9STRA)

HSP 1 Score: 280 bits (717), Expect = 1.270e-91
Identity = 127/175 (72.57%), Postives = 154/175 (88.00%), Query Frame = 1 
Query:    1 PILNKMTDEQEADKVVWTPSTMIERLGREIDNEDSIYYWCAKNNIPVFCPALTDGSIGDMIYFHKYKRPEFILDISGDVKRINDIAVRAPCTGMIIVGGGLVKHHVCNANLMRNGADFAVFINTGQEYDGSDSGARPDEAVSWGKIKLDASPVKVYAEATLVLPLLVAQTFAKDF 525
            PIL+ M +EQ+    +W+PSTMI RLG+EI+NE+S+YYWC KNNIPVFCPALTDGSIGDMIYFH Y++   ILDI  D++R+ND A+RA  TG II+GGG+VKHH+ NANLMRNGADFAVF+NTGQE+DGSD+GARPDEAVSWGK++L+A+P KVYA+ATLV PLLVA+TFAKDF
Sbjct:  186 PILDSMLEEQKTKGTIWSPSTMIHRLGKEINNEESVYYWCYKNNIPVFCPALTDGSIGDMIYFHSYRKEGLILDIVSDIRRMNDHAIRAKKTGAIILGGGVVKHHILNANLMRNGADFAVFVNTGQEFDGSDAGARPDEAVSWGKLRLNATPAKVYADATLVFPLLVAETFAKDF 360
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7521.16412.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLB6_ECTSI1.200e-12395.03Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YZK5_9STRA2.980e-9774.59DHS-like NAD/FAD-binding domain-containing protein... [more]
A0A812WM17_SYMMI1.570e-9674.14Hypothetical protein n=1 Tax=Symbiodinium microadr... [more]
A0A7S2CC55_9STRA3.630e-9475.29Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A485K965_9STRA7.250e-9370.17Aste57867_1638 protein n=1 Tax=Aphanomyces stellat... [more]
A0A7S1BPC0_9STRA1.770e-9272.07Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
K3WH50_GLOUD5.460e-9268.72Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A2R5G8G8_9STRA6.300e-9270.39Deoxyhypusine synthase n=1 Tax=Hondaea fermentalgi... [more]
A0A024UHC2_9STRA1.230e-9173.14Deoxyhypusine synthase n=6 Tax=Aphanomyces TaxID=1... [more]
A0A6G0XW26_9STRA1.270e-9172.57Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7521contigL-elsbetiae_contig7521:197..3199 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score354.8
Seed ortholog evalue2.4e-95
Seed eggNOG ortholog2880.D8LLB6
KEGG koko:K00809
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006464,GO:0006518,GO:0006576,GO:0006595,GO:0006807,GO:0008047,GO:0008150,GO:0008152,GO:0008216,GO:0008284,GO:0008612,GO:0009058,GO:0009059,GO:0009308,GO:0009405,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010604,GO:0010628,GO:0016043,GO:0016740,GO:0016765,GO:0018193,GO:0018205,GO:0019222,GO:0019538,GO:0019899,GO:0022607,GO:0030234,GO:0032991,GO:0034038,GO:0034641,GO:0034645,GO:0036211,GO:0042127,GO:0042802,GO:0042803,GO:0043043,GO:0043085,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044093,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046983,GO:0048518,GO:0048522,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0051094,GO:0051259,GO:0051262,GO:0051290,GO:0051291,GO:0051604,GO:0051704,GO:0060255,GO:0065003,GO:0065007,GO:0065009,GO:0071704,GO:0071840,GO:0090342,GO:0090343,GO:0097164,GO:0098772,GO:1901564,GO:1901566,GO:1901576,GO:1902494
EggNOG free text desc.peptidyl-lysine modification to peptidyl-hypusine
EggNOG OGsCOG1899@1,KOG2924@2759
EC2.5.1.46
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Exons5
Model size546
Cds size531
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7521.16412.1prot_L-elsbetiae_contig7521.16412.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig7521 212..3199 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816835.9196079-UTR-L-elsbetiae_contig7521:196..2111622816835.9196079-UTR-L-elsbetiae_contig7521:196..211Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7521 197..211 +
1691683850.0756702-UTR-L-elsbetiae_contig7521:196..2111691683850.0756702-UTR-L-elsbetiae_contig7521:196..211Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig7521 197..211 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816835.9347532-CDS-L-elsbetiae_contig7521:211..3221622816835.9347532-CDS-L-elsbetiae_contig7521:211..322Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7521 212..322 +
1691683850.100634-CDS-L-elsbetiae_contig7521:211..3221691683850.100634-CDS-L-elsbetiae_contig7521:211..322Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7521 212..322 +
1622816835.945667-CDS-L-elsbetiae_contig7521:983..10861622816835.945667-CDS-L-elsbetiae_contig7521:983..1086Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7521 984..1086 +
1691683850.112828-CDS-L-elsbetiae_contig7521:983..10861691683850.112828-CDS-L-elsbetiae_contig7521:983..1086Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7521 984..1086 +
1622816835.9576678-CDS-L-elsbetiae_contig7521:1511..16551622816835.9576678-CDS-L-elsbetiae_contig7521:1511..1655Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7521 1512..1655 +
1691683850.1255603-CDS-L-elsbetiae_contig7521:1511..16551691683850.1255603-CDS-L-elsbetiae_contig7521:1511..1655Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7521 1512..1655 +
1622816835.967984-CDS-L-elsbetiae_contig7521:2204..22931622816835.967984-CDS-L-elsbetiae_contig7521:2204..2293Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7521 2205..2293 +
1691683850.1343122-CDS-L-elsbetiae_contig7521:2204..22931691683850.1343122-CDS-L-elsbetiae_contig7521:2204..2293Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7521 2205..2293 +
1622816835.9779918-CDS-L-elsbetiae_contig7521:3115..31991622816835.9779918-CDS-L-elsbetiae_contig7521:3115..3199Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7521 3116..3199 +
1691683850.144136-CDS-L-elsbetiae_contig7521:3115..31991691683850.144136-CDS-L-elsbetiae_contig7521:3115..3199Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7521 3116..3199 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig7521.16412.1

>prot_L-elsbetiae_contig7521.16412.1 ID=prot_L-elsbetiae_contig7521.16412.1|Name=mRNA_L-elsbetiae_contig7521.16412.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=177bp
MTDEQEADKVVWTPSTMIERLGREIDNEDSIYYWCAKNNIPVFCPALTDG
SIGDMIYFHKYKRPEFILDISGDVKRINDIAVRAPCTGMIIVGGGLVKHH
VCNANLMRNGADFAVFINTGQEYDGSDSGARPDEAVSWGKIKLDASPVKV
YAEATLVLPLLVAQTFAKDFHEQKMA*
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mRNA from alignment at L-elsbetiae_contig7521:197..3199+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig7521.16412.1 ID=mRNA_L-elsbetiae_contig7521.16412.1|Name=mRNA_L-elsbetiae_contig7521.16412.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3003bp|location=Sequence derived from alignment at L-elsbetiae_contig7521:197..3199+ (Laminarionema elsbetiae ELsaHSoW15)
CCGATCCTGAACAAGATGACGGACGAGCAGGAGGCGGACAAGGTCGTCTG
GACGCCTTCCACGATGATCGAGCGCCTGGGGCGGGAGATCGACAACGAGG
ACTCCATCTACTACTGGTGCGCAAAGGTACGATTCTTCGAAATTCTCCGC
ATGTATGCATGTAAATTTGCGTTAAACCGCCGCCGACCCCAATGCCCCCC
CACCCACCCCCAACACACACACACACACATACGGACGGTAGACGTCGCCG
TCTCGAGGGCACAACCACAACAGGTGCTTGCAGTCCAAAATTTGGACCTC
TGGACTCCGTGGAAATCGCTCCTTGGGACAGCGCTAGGCGCGAAGGTTGC
ATGCAAAAGAAGGCGATCTAGAAAAGATCGTCTGATCGCACCTTGTTTTT
CGTCCAAAGAGGCCTGCCTGCCTGCCTGCCTGGCCTGCCTCTCTTTCATT
TCTGTACTGTACCCTCTCCCCCGTTTTGATTCGACCGTGGGCTGAGGCGA
GAGCTGACAGAAGAAAACAACGAGCGTGTGGACGGACATAATCACCACTG
CTAAACACCGCTGCATCTTGCGGGGGCCGCCGCGGCGTAGTGTTTTGTCG
TGGGGAGAGCACTGGTTTCGGCTCTTTTTTGGCTGTGCGCGCGTCCTTCC
TTGTCTGGTTGTTTGTTGTTTGCCTGGGCTGCAGCTGGCTGAGCCCCCCC
CCCCCCCCCCCTATGCCTGTTTGGGCTGGCCCCCCGTCCCACCCGTCCCC
TCCTTGCGCGTATTCGTCTCGGCCGCGGCAACCGTAGAACAATATCCCCG
TGTTCTGCCCGGCGCTAACGGACGGATCGATTGGGGACATGATCTACTTC
CACAAGTACAAGCGCCCAGAGTTCATCCTGGACATCTCAGGTAAGAGCGG
GCGGAGGGCTTATGGGAGTGAATTTGGAAGGACCGTTGGACGTACACGGC
ATCCATCAGCGGAAAGCTAAAATAAAGTGGGTAGGTAGAGAGAGGCGGGG
GGCGGAGACGACTTCACGGGAGAGGCTGTCTTGGGGGTTGTTTTAAGGGT
GCGACTAAAACGAGGCTCTCTTGGCTGAGGATTCGTGTTCGTTTTCAACG
TGGAGCGTAGCGTGAAAGGTTCAAAGCAGTACACATAGAGTACTCCAAAA
ACCGTGCTTTTACCGTGTTTGCCGTGCTTTCACCACGCGCCGACCAAGGA
AGGAAAGCGCTCACCCTGCTTCTGTTCTCTCACCTTCACCTCCCAAACCT
GCCCCCCCCCCCACACACACACCATCGACCACCATAACCCGTCACCCCCG
CCGTGCGCCCAAAAGGGGACGTGAAGCGAATAAACGACATCGCTGTGCGG
GCGCCGTGCACCGGCATGATCATCGTCGGGGGGGGCTTGGTGAAGCACCA
CGTCTGCAACGCGAACCTCATGCGCAACGGGGCAGATTTCGCGGTTTTCA
TCAACACTGGTGCGGACAATATCGTGTTTTGTTTTGTTTTTTCCTTCCCA
TTATCATTATTGACTTATTCGTCGTCTGCCCCATTGGCCGGCCCCCTTCC
TCCACTACGACTGGCTAGGCGACCCACACGGGATCACACAGGATGGGGGG
GTGGGGATGGACCTCCTCGTGCGGTTTATAGTAGTCTTGTGCGCGTTTGC
ATTCCTCGCGTGTGTGCGCTCTACAGTACTCAGTGGAGGTTGCTTTGAGA
CGGTAAAGAGGTGGTAAATAGATCGTACATACCTCTTCCCCTCCCCTCAC
CAGTATGAAACCCTGCTGCGTGCGTGTACGTACGTTGGCAAACCTTGGCG
AGACTGCGCCGCTGCTCGCCTGGGCAGACTGTTTTTTCAGCCTCGACGGG
AGAGCCGTTGTCGGGTAAATATCGCAGAGGTGGTTCGTTTTCGTCTTTGC
CGTGTCCCCATCCCTCAACCGTGTCCCGTGTGTGTGTGCGTGTGTGGGTG
GCCATGCCTTAACCATGTATATTATGTATGTGTGTGTGCGTGTGTGGGTG
TGGGCCAGGTCAAGAGTATGACGGCAGCGACTCCGGGGCAAGGCCGGACG
AGGCTGTGTCGTGGGGCAAGATCAAGCTGGATGCCAGCCCGGTTAAGGTC
AGTGCCCCCCCGTTCACCCTCACGGCGACCTAAGCCCGTGCTTGTTGGGG
GTGCCATGAGTGCGCGTTTCAGCGGCGAAAGTTCGAGAGGCGGGCTCCGC
CGGTCCCTTTCCTCTTGGCGTGGGAGGTGTCTGGTCTGGCTTTGCCTCTC
CCCCCTTCTATCGGGCCTGTACGTTGGCGGGTCGTTAACATCAGCGTGTA
GGCATCTATCTATCTGTTTAAGTTGACAACTACATGGTGTGTGTGCTCAA
CGGTCGATCGAGACAGCCGTGTCGTTTTGCCTCCGGGGCTCTTATAAGAC
TCCCTCAAAGAGGCAACTTCACACCGCTATATGTACGTGATGTCCTCGTT
TGTTTATATATATATTTAACAACAGTAGGGGGGTTTTGGGATTGAATTAC
TCACATTTTTTGTTTCCCCCACCCTTTGGATGTGGCGCATGTGAACAGCC
GTAGCTTTGTATTTGCACGGCGGTGTCGTCGATGTTTTGTGTAGGTGATC
TTGCCTCCCTCCCTCTTCTTCCTGGAATATACAAACCAACGCATCCCGTT
GTATCAAACTCCCAATCTCGCCCGCCCGGAGCTGTCATATTCGTTAAAAG
GTTTTCCAGGATACCAGTGTTCGCCTAGCATCCATGGCCCATCCAAAAAA
AGCATGCATGATAAACGTTTCACACCATGACGTGTTCATGACGAATTGAT
TTACCTTCCCTCCGAAGTGTACCTTCATTATTCATAGTTTAGCCCCCCCC
CCCCCCCTCCTTCATTTTACTTATAGTAGCCCCCCACGACGCGTACGGCC
ATGTCCGGTGCTTCTTCAGGTGTACGCGGAGGCGACGCTGGTCCTTCCCT
TGCTCGTGGCGCAGACGTTCGCCAAGGATTTCCACGAGCAGAAAATGGCA
TAG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig7521:197..3199+

>mRNA_L-elsbetiae_contig7521.16412.1 ID=mRNA_L-elsbetiae_contig7521.16412.1|Name=mRNA_L-elsbetiae_contig7521.16412.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1062bp|location=Sequence derived from alignment at L-elsbetiae_contig7521:197..3199+ (Laminarionema elsbetiae ELsaHSoW15)
ATGACGGACGAGCAGGAGGCGGACAAGGTCGTCTGGACGCCTTCCACGAT
GATCGAGCGCCTGGGGCGGGAGATCGACAACGAGGACTCCATCTACTACT
GGTGCGCAAAGATGACGGACGAGCAGGAGGCGGACAAGGTCGTCTGGACG
CCTTCCACGATGATCGAGCGCCTGGGGCGGGAGATCGACAACGAGGACTC
CATCTACTACTGGTGCGCAAAGAACAATATCCCCGTGTTCTGCCCGGCGC
TAACGGACGGATCGATTGGGGACATGATCTACTTCCACAAGTACAAGCGC
CCAGAGTTCATCCTGGACATCTCAGAACAATATCCCCGTGTTCTGCCCGG
CGCTAACGGACGGATCGATTGGGGACATGATCTACTTCCACAAGTACAAG
CGCCCAGAGTTCATCCTGGACATCTCAGGGGACGTGAAGCGAATAAACGA
CATCGCTGTGCGGGCGCCGTGCACCGGCATGATCATCGTCGGGGGGGGCT
TGGTGAAGCACCACGTCTGCAACGCGAACCTCATGCGCAACGGGGCAGAT
TTCGCGGTTTTCATCAACACTGGGGACGTGAAGCGAATAAACGACATCGC
TGTGCGGGCGCCGTGCACCGGCATGATCATCGTCGGGGGGGGCTTGGTGA
AGCACCACGTCTGCAACGCGAACCTCATGCGCAACGGGGCAGATTTCGCG
GTTTTCATCAACACTGGTCAAGAGTATGACGGCAGCGACTCCGGGGCAAG
GCCGGACGAGGCTGTGTCGTGGGGCAAGATCAAGCTGGATGCCAGCCCGG
TTAAGGTCAAGAGTATGACGGCAGCGACTCCGGGGCAAGGCCGGACGAGG
CTGTGTCGTGGGGCAAGATCAAGCTGGATGCCAGCCCGGTTAAGGTGTAC
GCGGAGGCGACGCTGGTCCTTCCCTTGCTCGTGGCGCAGACGTTCGCCAA
GGATTTCCACGAGCAGAAAATGGCATAGGTGTACGCGGAGGCGACGCTGG
TCCTTCCCTTGCTCGTGGCGCAGACGTTCGCCAAGGATTTCCACGAGCAG
AAAATGGCATAG
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