mRNA_L-elsbetiae_contig7520.16410.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig7520.16410.1
Unique NamemRNA_L-elsbetiae_contig7520.16410.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig7520.16410.1 vs. uniprot
Match: UPI001FACB867 (transmembrane protein 151B n=1 Tax=Girardinichthys multiradiatus TaxID=208333 RepID=UPI001FACB867)

HSP 1 Score: 63.5 bits (153), Expect = 4.840e-9
Identity = 40/146 (27.40%), Postives = 70/146 (47.95%), Query Frame = 1
Query:    4 TEAYEVEVITHHAEENYLFTE--WEDTTRPLSGTGIVLLTKLHLSKKLGFLSDSGSHHMNEAYDRFCNE--------NRRDAFQLFANKFFVPGFKERILCRKDEDKAPWWVGSCAYWLASLLLMNVPYRMFLDWNTGIIRHQIVK 411
            T+ Y   V TH AE  + +T    +D +R L+G      T+L  +K   F+     +   +   RF +E          R+  QL         F+E ++   D D+ PW+    A+WLA+LL+++ P R+F+++ T  + ++I K
Sbjct:  196 TQVYHERVNTHVAEGEFDYTHCGMKDVSRELTGLEGHPTTRLRFTKCFSFMEAGPENDYLDQRSRFFSEIEGLDEYMEAREGMQLRN-----VDFRENMIACVDPDRMPWYTSEVAFWLAALLMLSWPLRVFIEYRTAYVHYRIEK 336          
BLAST of mRNA_L-elsbetiae_contig7520.16410.1 vs. uniprot
Match: A0A8J2SR24_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SR24_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 1.670e-8
Identity = 42/135 (31.11%), Postives = 63/135 (46.67%), Query Frame = 1
Query:   16 EVEVITHHAEENYLFTEWEDTTRPLSGTG-IVLLTKLHLSKKLGFLSDSGSHHMNEAYDRFCNENRRDAFQLFANKFFVPGFKERILCRKDEDKAPWWVGSCAYWLASLLLMNVPYRMFLDWNTGIIRHQIVKKI 417
            EV V TH A   Y ++   D+           LL K+   K+  F  D    H      RF   +RRD    F+  F +P F+ER+L        P +  +  YW+A+LLL+  P+R++LD      R++ VK+I
Sbjct:  400 EVRVNTHAASHVYQYSWVRDSGGDAYNRWPATLLAKVEFGKRWTFGDDYTRQHFGMYKRRFIRHHRRDRHFDFSQDFELPEFRERLLVEMYPGAKPKYASTGWYWVANLLLLTWPFRVWLDSICQRRRYEYVKEI 534          
BLAST of mRNA_L-elsbetiae_contig7520.16410.1 vs. uniprot
Match: G1KUQ5_ANOCA (Uncharacterized protein n=2 Tax=Anolis carolinensis TaxID=28377 RepID=G1KUQ5_ANOCA)

HSP 1 Score: 60.8 bits (146), Expect = 4.150e-8
Identity = 35/141 (24.82%), Postives = 70/141 (49.65%), Query Frame = 1
Query:    4 TEAYEVEVITHHAEENYLFTE--WEDTTRPLSGTGIVLLTKLHLSKKLGFLS-DSGSHHMNEAYDRFCNENRRDAFQLFANKFFVPG--FKERILCRKDEDKAPWWVGSCAYWLASLLLMNVPYRMFLDWNTGIIRHQIVK 411
            T+ Y   V TH AE  + ++   ++D ++ L G  +   TKL  SK   F + +S + ++ +    F      D +        +    FKE ++   D D  PW++   A+W+A+L++++ P R+F+++ T  + + + K
Sbjct:  186 TQVYHERVNTHVAEAEFDYSNCGFKDISKELMGLELFSATKLKFSKCFSFANTESENSYLTQRTHFFTEIEGLDDYMEVREGMKLKNIDFKELMMAYGDPDHLPWYISHYAFWVAALMMISWPLRVFIEYRTAYVHYHVEK 326          
BLAST of mRNA_L-elsbetiae_contig7520.16410.1 vs. uniprot
Match: A0A3B3W062_9TELE (Si:dkey-13p1.4 n=1 Tax=Poecilia latipinna TaxID=48699 RepID=A0A3B3W062_9TELE)

HSP 1 Score: 59.7 bits (143), Expect = 1.030e-7
Identity = 38/146 (26.03%), Postives = 68/146 (46.58%), Query Frame = 1
Query:    4 TEAYEVEVITHHAEENYLFTE--WEDTTRPLSGTGIVLLTKLHLSKKLGFLSDSGSHHMNEAYDRFCNENR--------RDAFQLFANKFFVPGFKERILCRKDEDKAPWWVGSCAYWLASLLLMNVPYRMFLDWNTGIIRHQIVK 411
            T+ Y   V TH AE  + +T    +D +R L+G      T+L  +K   F      +       RF +E          R+  QL         F++ ++   D D+ PW+    A+WLA+LL+++ P R+F+++ T  + +++ K
Sbjct:  170 TQVYHERVNTHVAEGEFDYTHCGMKDVSRELTGLEGHPTTRLRFTKCFSFTEAGPENDYLNQRSRFFSETEGLDDFMEAREGMQLRN-----VDFRDNMITCVDPDRMPWYTSRVAFWLAALLMLSWPLRVFIEYRTAYVHYRVEK 310          
BLAST of mRNA_L-elsbetiae_contig7520.16410.1 vs. uniprot
Match: A0A3Q2E7F9_CYPVA (Si:dkey-13p1.4 n=3 Tax=Cyprinodon TaxID=28741 RepID=A0A3Q2E7F9_CYPVA)

HSP 1 Score: 59.7 bits (143), Expect = 1.050e-7
Identity = 38/146 (26.03%), Postives = 68/146 (46.58%), Query Frame = 1
Query:    4 TEAYEVEVITHHAEENYLFTE--WEDTTRPLSGTGIVLLTKLHLSKKLGFLSDSGSHHMNEAYDRFCNE--------NRRDAFQLFANKFFVPGFKERILCRKDEDKAPWWVGSCAYWLASLLLMNVPYRMFLDWNTGIIRHQIVK 411
            T+ Y   V TH AE  + ++    +D +R L+G      T+L  +K   F      +       RF +E          R+  QL         F+E ++   D D+ PW+    A+WLA+LL+++ P R+F+++ T  + +++ K
Sbjct:  162 TQVYHERVNTHVAEGEFDYSRCGMKDISRELTGLEGHPTTRLRFTKCFSFTEAGPENDYLNQRSRFFSEIEGLDDYMEAREGMQLRN-----VDFRENVVVCVDPDRMPWYTSQAAFWLAALLMLSWPLRVFIEYRTAYVHYRVEK 302          
BLAST of mRNA_L-elsbetiae_contig7520.16410.1 vs. uniprot
Match: UPI0020268298 (transmembrane protein 151B-like isoform X1 n=2 Tax=Sphaerodactylus townsendi TaxID=933632 RepID=UPI0020268298)

HSP 1 Score: 58.2 bits (139), Expect = 3.610e-7
Identity = 34/143 (23.78%), Postives = 71/143 (49.65%), Query Frame = 1
Query:    4 TEAYEVEVITHHAEENYLFTE--WEDTTRPLSGTGIVLLTKLHLSKKLGFLS-DSGSHHMNEAYDRFCNENRRDAFQLFANKFFVPG--FKERILCRKDEDKAPWWVGSCAYWLASLLLMNVPYRMFLDWNTGIIRHQIVKKI 417
            T+ Y   V TH AE  + ++   ++D ++ L G      TKL  +K   F + +S + ++ +    F      D +        +    FKE ++   D +  PW+V   A+W+A+L++++ P R+F+++ T  +++ + K +
Sbjct:  177 TQVYHERVNTHVAEAEFDYSNCGFKDISKELMGLEWYSATKLKFTKCFSFANTESENSYLTQRAHFFTEIEGLDDYMEVREGMQLKNIEFKEIMMAYGDPEHLPWYVSQYAFWVAALMMLSWPLRVFIEYRTAFVQYHVEKLV 319          
BLAST of mRNA_L-elsbetiae_contig7520.16410.1 vs. uniprot
Match: M3ZV78_XIPMA (Uncharacterized protein n=16 Tax=Poeciliinae TaxID=586240 RepID=M3ZV78_XIPMA)

HSP 1 Score: 58.2 bits (139), Expect = 3.630e-7
Identity = 38/146 (26.03%), Postives = 67/146 (45.89%), Query Frame = 1
Query:    4 TEAYEVEVITHHAEE--NYLFTEWEDTTRPLSGTGIVLLTKLHLSKKLGFLSDSGSHHMNEAYDRFCNENR--------RDAFQLFANKFFVPGFKERILCRKDEDKAPWWVGSCAYWLASLLLMNVPYRMFLDWNTGIIRHQIVK 411
            T+ Y   V TH AE   +Y     +D +R L+G      T+L  +K   F      +       RF +E          R+  QL         F++ ++   D D+ PW+    A+WLA+LL+++ P R+F+++ T  + +++ K
Sbjct:  194 TQVYNERVNTHVAEGEFDYAHCGMKDVSRELTGLEGHPTTRLRFTKCFSFTEAGPENDYLNQRSRFFSETEGLDDYMEAREGMQLRN-----VDFRDNMIACVDPDQMPWYTSRVAFWLAALLMLSWPLRVFIEYRTAYVHYRVEK 334          
BLAST of mRNA_L-elsbetiae_contig7520.16410.1 vs. uniprot
Match: UPI001C4B2D25 (transmembrane protein 151B-like n=1 Tax=Sceloporus undulatus TaxID=8520 RepID=UPI001C4B2D25)

HSP 1 Score: 57.8 bits (138), Expect = 4.920e-7
Identity = 34/141 (24.11%), Postives = 69/141 (48.94%), Query Frame = 1
Query:    4 TEAYEVEVITHHAEENYLFTE--WEDTTRPLSGTGIVLLTKLHLSKKLGFLS-DSGSHHMNEAYDRFCNENRRDAFQLFANKFFVPG--FKERILCRKDEDKAPWWVGSCAYWLASLLLMNVPYRMFLDWNTGIIRHQIVK 411
            T+ Y   V TH AE  + ++   ++D ++ L G      TKL  +K   F + +S + ++ +    F      D +        +    FKE ++   D D  PW++   A+W+A+L++++ P R+F+++ T  + + + K
Sbjct:  191 TQVYHERVNTHVAEAEFDYSHCGFKDISKELMGLEQYSATKLKFTKCFSFANTESENSYLTQRAHFFTEIEGLDDYMEVREGMKLKNIDFKELMMAYGDPDHLPWYISHYAFWVAALMMISWPLRVFIEYRTAYVHYHVEK 331          
BLAST of mRNA_L-elsbetiae_contig7520.16410.1 vs. uniprot
Match: A0A3Q2T7U2_FUNHE (Transmembrane protein 151B-like n=2 Tax=Fundulus heteroclitus TaxID=8078 RepID=A0A3Q2T7U2_FUNHE)

HSP 1 Score: 57.8 bits (138), Expect = 4.970e-7
Identity = 37/141 (26.24%), Postives = 65/141 (46.10%), Query Frame = 1
Query:    4 TEAYEVEVITHHAEENYLFTE--WEDTTRPLSGTGIVLLTKLHLSKKLGFLSDSGSHHMNEAYDRFCNENRRDAFQLFANKFFV---PGFKERILCRKDEDKAPWWVGSCAYWLASLLLMNVPYRMFLDWNTGIIRHQIVK 411
            T+ Y   V TH AE  + +     +D +R L+G      T+L  +K   F      +       RF +E       + A +  +     F+E +L   D D  PW+    A+WLA+LL+++ P R+F ++ T  + +++ K
Sbjct:  192 TQVYHERVNTHVAEGQFDYGRCGMKDVSRELAGLEGHPATRLRFTKCFSFTEAGPENDYLSQRSRFFSEIEGLDDYMEAREGMLLRNVDFRENVLACVDPDTMPWYTSQAAFWLAALLMLSWPLRVFTEYRTAYVHYRVEK 332          
BLAST of mRNA_L-elsbetiae_contig7520.16410.1 vs. uniprot
Match: A0A0K0EAU2_STRER (Uncharacterized protein n=1 Tax=Strongyloides stercoralis TaxID=6248 RepID=A0A0K0EAU2_STRER)

HSP 1 Score: 57.4 bits (137), Expect = 6.800e-7
Identity = 37/142 (26.06%), Postives = 67/142 (47.18%), Query Frame = 1
Query:    4 TEAYEVEVITHHAEENYLFTEW--EDTTRPLSGTGIVLLTKLHLSKKLGFLSDSGSHHMNEAYDRFCNENR-RDAFQLFANKFFVPG--FKERIL-CRKDEDKAPWWVGSCAYWLASLLLMNVPYRMFLDWNTGIIRHQIVK 411
            T+ Y     +H A   + F +   +D ++ L       + K+  +K   F     +    E   RF NEN  +D +        + G  F+E +L C+K +   PW++    YW+AS+LL++ P R+F D+ T  + +++ K
Sbjct:  151 TQVYYERFNSHTAGNVFQFDQCGVKDISKSLHDINKYHVIKIRFNKGFVFACSQAADEFEEQRARFFNENESKDDYMEVREGLDLGGCVFEEELLACKKKKSGFPWYMKVPTYWIASILLLSWPLRVFCDYKTAYLSYRVTK 292          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7520.16410.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
UPI001FACB8674.840e-927.40transmembrane protein 151B n=1 Tax=Girardinichthys... [more]
A0A8J2SR24_9STRA1.670e-831.11Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
G1KUQ5_ANOCA4.150e-824.82Uncharacterized protein n=2 Tax=Anolis carolinensi... [more]
A0A3B3W062_9TELE1.030e-726.03Si:dkey-13p1.4 n=1 Tax=Poecilia latipinna TaxID=48... [more]
A0A3Q2E7F9_CYPVA1.050e-726.03Si:dkey-13p1.4 n=3 Tax=Cyprinodon TaxID=28741 RepI... [more]
UPI00202682983.610e-723.78transmembrane protein 151B-like isoform X1 n=2 Tax... [more]
M3ZV78_XIPMA3.630e-726.03Uncharacterized protein n=16 Tax=Poeciliinae TaxID... [more]
UPI001C4B2D254.920e-724.11transmembrane protein 151B-like n=1 Tax=Sceloporus... [more]
A0A3Q2T7U2_FUNHE4.970e-726.24Transmembrane protein 151B-like n=2 Tax=Fundulus h... [more]
A0A0K0EAU2_STRER6.800e-726.06Uncharacterized protein n=1 Tax=Strongyloides ster... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7520contigL-elsbetiae_contig7520:181..597 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score63.2
Seed ortholog evalue1.1e-07
Seed eggNOG ortholog7955.ENSDARP00000129249
Preferred nametmem151b
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Si dkey-13p1.4
EggNOG OGs28KHH@1,2QSYQ@2759,38XQM@33154,3BCS2@33208,3CYVQ@33213,48CD2@7711,490VJ@7742,49TQC@7898
Ec32 ortholog descriptionHypothetical protein
Ec32 orthologEc-15_004190.1
COG Functional cat.S
Best tax levelActinopterygii
Best eggNOG OGNA|NA|NA
Exons1
Model size417
Cds size417
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816835.8877678-CDS-L-elsbetiae_contig7520:180..5971622816835.8877678-CDS-L-elsbetiae_contig7520:180..597Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7520 181..597 +
1691683850.054497-CDS-L-elsbetiae_contig7520:180..5971691683850.054497-CDS-L-elsbetiae_contig7520:180..597Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7520 181..597 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7520.16410.1prot_L-elsbetiae_contig7520.16410.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig7520 181..597 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig7520.16410.1

>prot_L-elsbetiae_contig7520.16410.1 ID=prot_L-elsbetiae_contig7520.16410.1|Name=mRNA_L-elsbetiae_contig7520.16410.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=139bp
RTEAYEVEVITHHAEENYLFTEWEDTTRPLSGTGIVLLTKLHLSKKLGFL
SDSGSHHMNEAYDRFCNENRRDAFQLFANKFFVPGFKERILCRKDEDKAP
WWVGSCAYWLASLLLMNVPYRMFLDWNTGIIRHQIVKKI
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mRNA from alignment at L-elsbetiae_contig7520:181..597+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig7520.16410.1 ID=mRNA_L-elsbetiae_contig7520.16410.1|Name=mRNA_L-elsbetiae_contig7520.16410.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=417bp|location=Sequence derived from alignment at L-elsbetiae_contig7520:181..597+ (Laminarionema elsbetiae ELsaHSoW15)
AGGACCGAGGCGTATGAAGTGGAAGTGATTACTCACCACGCCGAAGAAAA CTATCTGTTCACGGAATGGGAGGACACAACGCGGCCGCTATCAGGCACGG GAATCGTGCTGCTAACGAAGCTTCATCTCTCGAAAAAGCTGGGATTCCTT TCGGACTCCGGTAGCCACCACATGAACGAAGCCTACGACAGGTTTTGCAA TGAGAACCGCAGGGACGCCTTCCAGCTCTTTGCGAACAAGTTCTTCGTCC CAGGGTTTAAGGAAAGGATCCTGTGTCGCAAGGACGAGGATAAGGCTCCG TGGTGGGTGGGGTCGTGTGCTTATTGGCTGGCGTCACTGCTGTTGATGAA TGTGCCGTACCGCATGTTCCTTGACTGGAACACAGGCATCATCAGGCACC AGATCGTAAAGAAAATC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig7520:181..597+

>mRNA_L-elsbetiae_contig7520.16410.1 ID=mRNA_L-elsbetiae_contig7520.16410.1|Name=mRNA_L-elsbetiae_contig7520.16410.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=834bp|location=Sequence derived from alignment at L-elsbetiae_contig7520:181..597+ (Laminarionema elsbetiae ELsaHSoW15)
AGGACCGAGGCGTATGAAGTGGAAGTGATTACTCACCACGCCGAAGAAAA
CTATCTGTTCACGGAATGGGAGGACACAACGCGGCCGCTATCAGGCACGG
GAATCGTGCTGCTAACGAAGCTTCATCTCTCGAAAAAGCTGGGATTCCTT
TCGGACTCCGGTAGCCACCACATGAACGAAGCCTACGACAGGTTTTGCAA
TGAGAACCGCAGGGACGCCTTCCAGCTCTTTGCGAACAAGTTCTTCGTCC
CAGGGTTTAAGGAAAGGATCCTGTGTCGCAAGGACGAGGATAAGGCTCCG
TGGTGGGTGGGGTCGTGTGCTTATTGGCTGGCGTCACTGCTGTTGATGAA
TGTGCCGTACCGCATGTTCCTTGACTGGAACACAGGCATCATCAGGCACC
AGATCGTAAAGAAAATCAGGACCGAGGCGTATGAAGTGGAAGTGATTACT
CACCACGCCGAAGAAAACTATCTGTTCACGGAATGGGAGGACACAACGCG
GCCGCTATCAGGCACGGGAATCGTGCTGCTAACGAAGCTTCATCTCTCGA
AAAAGCTGGGATTCCTTTCGGACTCCGGTAGCCACCACATGAACGAAGCC
TACGACAGGTTTTGCAATGAGAACCGCAGGGACGCCTTCCAGCTCTTTGC
GAACAAGTTCTTCGTCCCAGGGTTTAAGGAAAGGATCCTGTGTCGCAAGG
ACGAGGATAAGGCTCCGTGGTGGGTGGGGTCGTGTGCTTATTGGCTGGCG
TCACTGCTGTTGATGAATGTGCCGTACCGCATGTTCCTTGACTGGAACAC
AGGCATCATCAGGCACCAGATCGTAAAGAAAATC
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