mRNA_L-elsbetiae_contig7509.16404.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig7509.16404.1
Unique NamemRNA_L-elsbetiae_contig7509.16404.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig7509.16404.1 vs. uniprot
Match: A0A6H5L317_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L317_9PHAE)

HSP 1 Score: 384 bits (987), Expect = 2.310e-130
Identity = 241/313 (77.00%), Postives = 257/313 (82.11%), Query Frame = 1 
Query:    1 EEQAAIAQAVIVTDDVSWTLD---------ARPTTPPPVXXXDATSRAXXXXQVPXXXXXXXXXXXXXXXXXXXXRXXXXXXXXXXXXXXXXXXRLLRLVGGVDISFVKGSHENACASLVVLEFPSLETVYEAYERVTMSFPYVSGFLAFREVDHLARLVGQLRREQPDLEPDVLFVDGNGRLHPRGAGLACHLGVVTGLRTVGLGKTFSQVDGLTKGGVRERVRTLLAEGEREMPLVGASGTVWGTALVPKEEGGRKVG-VVTNPIFVSIGHRVSLETCVTLTKAVGRYRVPEPIRQADMRSREVIREWLLE 909
            EEQ  IA+AV+ TDDV WTLD         AR  TPPP      T           XXXXXXXXXXXXXXXXXXX XXXXXXXXXX        RLLRLVGGVDISFVKGS ENACASLVVL+FPSL+TVYEAYERVTM+ PY+SGFLAFREVDHLARLVGQLRRE+PDLEPDV+FVDGNGRLHPRGAGLACHLGVVTGLRTVGLGKTF QVDGLTK  VRER + LL+ G+RE PL+G SGTVWGTALVPKEE G+K G VVT+P+FVSIGHRVSLETCV LTKAV R+RVPEPIRQADMRSREVIREWLLE
Sbjct:   12 EEQTRIARAVVDTDDVLWTLDQPPERNAATARRPTPPPQHGQTQTEPKEMSSAAVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVTSATPGRLLRLVGGVDISFVKGSEENACASLVVLDFPSLKTVYEAYERVTMNHPYISGFLAFREVDHLARLVGQLRRERPDLEPDVVFVDGNGRLHPRGAGLACHLGVVTGLRTVGLGKTFLQVDGLTKVDVRERAKVLLSAGKRETPLLGTSGTVWGTALVPKEEEGKKGGGVVTSPVFVSIGHRVSLETCVALTKAVCRFRVPEPIRQADMRSREVIREWLLE 324
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BLAST of mRNA_L-elsbetiae_contig7509.16404.1 vs. uniprot
Match: D8LPT4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPT4_ECTSI)

HSP 1 Score: 379 bits (972), Expect = 1.490e-129
Identity = 193/219 (88.13%), Postives = 205/219 (93.61%), Query Frame = 1 
Query:  256 RLLRLVGGVDISFVKGSHENACASLVVLEFPSLETVYEAYERVTMSFPYVSGFLAFREVDHLARLVGQLRREQPDLEPDVLFVDGNGRLHPRGAGLACHLGVVTGLRTVGLGKTFSQVDGLTKGGVRERVRTLLAEGEREMPLVGASGTVWGTALVPKEEGGRKVG-VVTNPIFVSIGHRVSLETCVTLTKAVGRYRVPEPIRQADMRSREVIREWLLE 909
            RLLRLVGGVDISFVKGS ENACASLVVLEFPSL+TVYEAYERVTM+ PY+SGFLAFREVDHLARLVGQLRRE+PDLEPDV+FVDGNGRLHPRGAGLACHLGVVTGLRTVGLGKTF QVDGLTK GVRERV+ LL+ GERE PL+G SGTVWGTA VPKEE G+K G VVT+P+FVSIGHRVSLETCV LTKAV R+RVPEPIRQADMRSREVIREWLLE
Sbjct:    4 RLLRLVGGVDISFVKGSEENACASLVVLEFPSLQTVYEAYERVTMNHPYISGFLAFREVDHLARLVGQLRRERPDLEPDVVFVDGNGRLHPRGAGLACHLGVVTGLRTVGLGKTFLQVDGLTKVGVRERVKALLSAGERETPLLGTSGTVWGTAFVPKEEEGKKGGGVVTSPVFVSIGHRVSLETCVALTKAVCRFRVPEPIRQADMRSREVIREWLLE 222
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BLAST of mRNA_L-elsbetiae_contig7509.16404.1 vs. uniprot
Match: A0A835YW13_9STRA (Endonuclease V-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW13_9STRA)

HSP 1 Score: 253 bits (646), Expect = 8.680e-80
Identity = 132/215 (61.40%), Postives = 158/215 (73.49%), Query Frame = 1 
Query:  256 RLLRLVGGVDISFVKGSHENACASLVVLEFPSLETVYEAYERVTMSFPYVSGFLAFREVDHLARLVGQLRREQPDLEPDVLFVDGNGRLHPRGAGLACHLGVVTGLRTVGLGKTFSQVDGLTKGGVRERVRTLLAEGEREMPLVGASGTVWGTALVPKEEGGRKVGVVTNPIFVSIGHRVSLETCVTLTKAVGRYRVPEPIRQADMRSREVIREW 900
            R LR VGGVDISF K S +NACASLVVL FP L  V++ + RVTM+ PY+SGFLAFREV+H+A LV +LR E+PDL PDV+FVDGNG LHPRGAGLA HLGV+  LRT+G+GKTF  +DGLT+ GVR     L  E   E  L G SGTVWG AL   +        VT PIFVS+GHRV+L+T V LT+A   YR+PEP+RQAD+ SR ++REW
Sbjct:   47 RPLRYVGGVDISFTKNSSDNACASLVVLSFPELIVVHQLHARVTMTLPYISGFLAFREVEHIAALVERLRAERPDLLPDVVFVDGNGVLHPRGAGLASHLGVLCNLRTIGIGKTFLHIDGLTRDGVRAACGALPPEARGEYELRGDSGTVWGRALCFNDS-------VTAPIFVSVGHRVALQTAVALTRACCLYRMPEPVRQADILSRALVREW 254
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BLAST of mRNA_L-elsbetiae_contig7509.16404.1 vs. uniprot
Match: W2YQG1_PHYPR (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=W2YQG1_PHYPR)

HSP 1 Score: 228 bits (580), Expect = 9.050e-70
Identity = 118/215 (54.88%), Postives = 150/215 (69.77%), Query Frame = 1 
Query:  256 RLLRLVGGVDISFVKGSHENACASLVVLEFPSLETVYEAYERVTMSFPYVSGFLAFREVDHLARLVGQLRREQPDLEPDVLFVDGNGRLHPRGAGLACHLGVVTGLRTVGLGKTFSQVDGLTKGGVRERVRTLLAEGEREMPLVGASGTVWGTALVPKEEGGRKVGVVTNPIFVSIGHRVSLETCVTLTKAVGRYRVPEPIRQADMRSREVIREW 900
            +LLR V GVDISF+KGS E+ACAS+VVL+FPSL  +YEA+  V++  PY++GFLAFREV  L +L   LRR +PDL PDV  VDGNG LHP+G GLA H GV+  + T+G+GKTF  VDGLTK  V+  +     E    + L G SG +WG AL            V NP++VS+GH +SL+T V + +A  +YRVPEPIRQAD+RSREVIR+W
Sbjct:   53 KLLRRVAGVDISFLKGSDEHACASIVVLDFPSLTVLYEAFTYVSLPAPYIAGFLAFREVPALTKLYDDLRRRRPDLLPDVTLVDGNGILHPQGFGLASHFGVLENIPTIGVGKTFLHVDGLTKPDVKGLMAKAREEDRDLVKLTGKSGKIWGAALCG-------TAGVKNPVYVSVGHMLSLDTSVAIAQACSQYRVPEPIRQADLRSREVIRKW 260
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BLAST of mRNA_L-elsbetiae_contig7509.16404.1 vs. uniprot
Match: A0A6A3ZRE1_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3ZRE1_9STRA)

HSP 1 Score: 227 bits (578), Expect = 1.290e-69
Identity = 117/215 (54.42%), Postives = 150/215 (69.77%), Query Frame = 1 
Query:  256 RLLRLVGGVDISFVKGSHENACASLVVLEFPSLETVYEAYERVTMSFPYVSGFLAFREVDHLARLVGQLRREQPDLEPDVLFVDGNGRLHPRGAGLACHLGVVTGLRTVGLGKTFSQVDGLTKGGVRERVRTLLAEGEREMPLVGASGTVWGTALVPKEEGGRKVGVVTNPIFVSIGHRVSLETCVTLTKAVGRYRVPEPIRQADMRSREVIREW 900
            ++L+ V GVDISF+KGS E+ACAS+VVLE+PSL  +YEA+  V++  PY++GFLAFREV  L +L   LRR +PDL PDV  VDGNG LHP+G GLA H GV+  + TVG+GKTF  VDGLTK  V+  +     E    + L G SG VWG AL            V NP++VS+GH +SL++ V + +A  +YRVPEPIRQAD+RSREVIR+W
Sbjct:   42 KVLKRVAGVDISFLKGSSEHACASIVVLEYPSLSVLYEAFAYVSLPAPYIAGFLAFREVPALTKLYDDLRRRRPDLLPDVTLVDGNGVLHPQGFGLASHFGVLESVPTVGVGKTFLHVDGLTKADVKRLMARAREENHDLVKLAGKSGKVWGAALCG-------TAGVKNPVYVSVGHMLSLDSSVAIAQACSQYRVPEPIRQADLRSREVIRQW 249
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BLAST of mRNA_L-elsbetiae_contig7509.16404.1 vs. uniprot
Match: A0A3T1CXH4_9VIRU (Endonuclease V n=1 Tax=Acanthamoeba castellanii medusavirus TaxID=2080449 RepID=A0A3T1CXH4_9VIRU)

HSP 1 Score: 225 bits (573), Expect = 1.390e-69
Identity = 120/204 (58.82%), Postives = 143/204 (70.10%), Query Frame = 1 
Query:  262 LRLVGGVDISFVKGSHENACASLVVLEFPSLETVYEAYERVTMSFPYVSGFLAFREVDHLARLVGQLRREQPDLEPDVLFVDGNGRLHPRGAGLACHLGVVTGLRTVGLGKTFSQVDGLTKGGVRERVRTLLAEGEREMPLVGASGTVWGTALVPKEEGGRKVGVVTNPIFVSIGHRVSLETCVTLTKAVGRYRVPEPIRQADM 873
            +R VGGVDISFVKG   +ACASLVVL +PSLE V+     V M  PY+SGFLAFRE  HLARL+  LR E+PDLEP VLFVDGNG LHPRG GLA HLGV++G+ T+G+ KTF  VDGL    V+  +R      +  +PLVG+SGT WG AL       +     TNPI+VS+GHRVSL +  TLT A  R+RVPEPIRQAD+
Sbjct:   28 VRYVGGVDISFVKGDAVSACASLVVLAYPSLELVWSVERMVAMELPYISGFLAFREAPHLARLIDHLRAERPDLEPQVLFVDGNGILHPRGFGLASHLGVLSGIPTIGVAKTFLHVDGLDARSVKSAMR------DGRLPLVGSSGTEWGVAL-------KSTKGSTNPIYVSVGHRVSLASAETLTAACCRHRVPEPIRQADL 218
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BLAST of mRNA_L-elsbetiae_contig7509.16404.1 vs. uniprot
Match: A0A5D6Y5E5_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y5E5_9STRA)

HSP 1 Score: 226 bits (576), Expect = 6.680e-69
Identity = 117/215 (54.42%), Postives = 149/215 (69.30%), Query Frame = 1 
Query:  256 RLLRLVGGVDISFVKGSHENACASLVVLEFPSLETVYEAYERVTMSFPYVSGFLAFREVDHLARLVGQLRREQPDLEPDVLFVDGNGRLHPRGAGLACHLGVVTGLRTVGLGKTFSQVDGLTKGGVRERVRTLLAEGEREMPLVGASGTVWGTALVPKEEGGRKVGVVTNPIFVSIGHRVSLETCVTLTKAVGRYRVPEPIRQADMRSREVIREW 900
            R +R + GVDISF+KGS+E+ACAS+VVL+FPSL  +YEA+  V +  PY++GFLAFREV  L +L   L    P L PD+  VDGNG LHPRG GLA H GV+ G+ T+G+GKTF  VDGLTKG V+ R+     +G +   L GASG VWG AL   E        V NP+FVS+GH +SL+T + +  A  +YRVPEPIRQAD+RSR V++EW
Sbjct:   63 RHVRRLAGVDISFLKGSNEHACASIVVLDFPSLRVLYEAFTYVCLPAPYIAGFLAFREVPALTKLYEDLLARCPALVPDITLVDGNGVLHPRGFGLASHFGVLMGIPTIGVGKTFLHVDGLTKGDVKARMLQAQRDGAQVAQLEGASGRVWGAALCSAEG-------VQNPVFVSVGHLLSLDTSLAVVDACSQYRVPEPIRQADLRSRRVVKEW 270
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BLAST of mRNA_L-elsbetiae_contig7509.16404.1 vs. uniprot
Match: K3WTZ8_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WTZ8_GLOUD)

HSP 1 Score: 225 bits (573), Expect = 1.120e-68
Identity = 116/213 (54.46%), Postives = 148/213 (69.48%), Query Frame = 1 
Query:  262 LRLVGGVDISFVKGSHENACASLVVLEFPSLETVYEAYERVTMSFPYVSGFLAFREVDHLARLVGQLRREQPDLEPDVLFVDGNGRLHPRGAGLACHLGVVTGLRTVGLGKTFSQVDGLTKGGVRERVRTLLAEGEREMPLVGASGTVWGTALVPKEEGGRKVGVVTNPIFVSIGHRVSLETCVTLTKAVGRYRVPEPIRQADMRSREVIREW 900
            L  V GVDISF+KGS+E+ACAS+VVL++PSL  VYEA+  V++  PY+ GFLAFREV  L RL   L    P   PD+  VDGNG LHP+G GLA H GV+  + T+G+GKTF  VDGLTKG VR++V     + E+ + L G S  VWG AL  +  G      V NP+FVS+GH+VSL++ + + KA  RYR+PEPIRQAD+RSR+VIR W
Sbjct:   54 LERVAGVDISFLKGSNEHACASIVVLQYPSLRVVYEAFTYVSLPAPYIPGFLAFREVPALTRLYEDLVARCPQYVPDITLVDGNGILHPQGFGLASHFGVLMDVPTIGVGKTFLHVDGLTKGDVRQQVAAAKTKHEQVVELQGESSKVWGAALCNQAAG------VENPVFVSVGHKVSLDSSLRIVKACSRYRIPEPIRQADLRSRQVIRSW 260
[Close]
BLAST of mRNA_L-elsbetiae_contig7509.16404.1 vs. uniprot
Match: A0A093G888_DRYPU (Endonuclease V (Fragment) n=2 Tax=Dryobates pubescens TaxID=118200 RepID=A0A093G888_DRYPU)

HSP 1 Score: 219 bits (559), Expect = 4.250e-67
Identity = 119/215 (55.35%), Postives = 151/215 (70.23%), Query Frame = 1 
Query:  262 LRLVGGVDISFVKGSHENACASLVVLEFPSLETVYEAYERVTMSFPYVSGFLAFREVDHLARLVGQLRREQPDLEPDVLFVDGNGRLHPRGAGLACHLGVVTGLRTVGLGKTFSQVDGLTKGGV-RERVRTLLAEGEREMPLVGASGTVWGTALVPKEEGGRKVGVVTNPIFVSIGHRVSLETCVTLTKAVGRYRVPEPIRQADMRSREVIREWL 903
            L  VGGVD+S+VKG   NACASLVVL +P+LE +YE    V +S PYV+GFLAFREV  L   + +L +E+P+L+P VL VDGNG LHPRG G+ACHLGV+TGL  +G+ K   QVDGL K  + +E++R+L   G+   PL G+SG V G AL       R  G  + P++VS+GHRV LET + L K+  RYRVPEPIRQAD+RSRE IR+ L
Sbjct:   26 LERVGGVDLSYVKGDDTNACASLVVLSYPALEVLYEDCRMVAVSAPYVAGFLAFREVPFLVEALQRLEQEKPELKPQVLLVDGNGLLHPRGFGVACHLGVLTGLPCIGVAKNLLQVDGLVKDELHKEQIRSLRRGGD-SFPLTGSSGGVLGMAL-------RSYGKSSKPLYVSVGHRVCLETALRLVKSCCRYRVPEPIRQADIRSREYIRQQL 232
[Close]
BLAST of mRNA_L-elsbetiae_contig7509.16404.1 vs. uniprot
Match: UPI0010A912E6 (endonuclease V n=1 Tax=Ornithorhynchus anatinus TaxID=9258 RepID=UPI0010A912E6)

HSP 1 Score: 220 bits (561), Expect = 6.730e-67
Identity = 124/215 (57.67%), Postives = 150/215 (69.77%), Query Frame = 1 
Query:  262 LRLVGGVDISFVKGSHENACASLVVLEFPSLETVYEAYERVTMSFPYVSGFLAFREVDHLARLVGQLRREQPDLEPDVLFVDGNGRLHPRGAGLACHLGVVTGLRTVGLGKTFSQVDGLTKGGV-RERVRTLLAEGEREMPLVGASGTVWGTALVPKEEGGRKVGVVTNPIFVSIGHRVSLETCVTLTKAVGRYRVPEPIRQADMRSREVIREWL 903
            LR VGGVD+SFVKG   +ACASLVVL +P LE VYE    V ++ PYVSGFLAFRE   LA  V +LR E+P L P VLFVDGNG LH RG G+ACHLGV+TGL  VG+ K   QVDGL    + +E++R L   G+   PL+G SGTV G AL   E         TNP++VS+GH++SL+T V LT+A  R+RVPEPIRQAD+RSRE IR+ L
Sbjct:   45 LRRVGGVDLSFVKGDGVSACASLVVLGYPELEVVYEECRMVRLTAPYVSGFLAFREAPFLADAVRRLREEEPSLVPQVLFVDGNGLLHHRGFGVACHLGVLTGLPCVGVAKKLLQVDGLENDELHKEKIRELRTGGDA-FPLLGDSGTVLGMALKSHERS-------TNPVYVSVGHKISLDTAVRLTQACCRHRVPEPIRQADIRSREYIRKTL 251
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7509.16404.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L317_9PHAE2.310e-13077.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LPT4_ECTSI1.490e-12988.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YW13_9STRA8.680e-8061.40Endonuclease V-domain-containing protein n=1 Tax=T... [more]
W2YQG1_PHYPR9.050e-7054.88Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
A0A6A3ZRE1_9STRA1.290e-6954.42Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
A0A3T1CXH4_9VIRU1.390e-6958.82Endonuclease V n=1 Tax=Acanthamoeba castellanii me... [more]
A0A5D6Y5E5_9STRA6.680e-6954.42Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
K3WTZ8_GLOUD1.120e-6854.46Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A093G888_DRYPU4.250e-6755.35Endonuclease V (Fragment) n=2 Tax=Dryobates pubesc... [more]
UPI0010A912E66.730e-6757.67endonuclease V n=1 Tax=Ornithorhynchus anatinus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7509contigL-elsbetiae_contig7509:5655..9585 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score380.6
Seed ortholog evalue7.6e-103
Seed eggNOG ortholog2880.D8LPT4
Preferred nameENDOV
KEGG koko:K21813
Hectar predicted targeting categoryother localisation
GOsGO:0000287,GO:0003674,GO:0003676,GO:0003677,GO:0003723,GO:0003727,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004521,GO:0004536,GO:0004540,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016888,GO:0016891,GO:0016893,GO:0031974,GO:0031981,GO:0033554,GO:0034641,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0046872,GO:0050896,GO:0051716,GO:0070013,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140097,GO:0140098,GO:1901360,GO:1901363
EggNOG free text desc.endoribonuclease activity, producing 5'-phosphomonoesters
EggNOG OGsCOG1515@1,KOG4417@2759
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03400
Ec32 ortholog descriptionEndonuclease V
Ec32 orthologEc-18_002390.1
Exons6
Model size987
Cds size987
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7509.16404.1prot_L-elsbetiae_contig7509.16404.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig7509 5655..9585 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816834.9423351-CDS-L-elsbetiae_contig7509:5654..60831622816834.9423351-CDS-L-elsbetiae_contig7509:5654..6083Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7509 5655..6083 +
1691683849.232524-CDS-L-elsbetiae_contig7509:5654..60831691683849.232524-CDS-L-elsbetiae_contig7509:5654..6083Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7509 5655..6083 +
1622816834.9544883-CDS-L-elsbetiae_contig7509:6688..67371622816834.9544883-CDS-L-elsbetiae_contig7509:6688..6737Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7509 6689..6737 +
1691683849.2444608-CDS-L-elsbetiae_contig7509:6688..67371691683849.2444608-CDS-L-elsbetiae_contig7509:6688..6737Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7509 6689..6737 +
1622816834.9665642-CDS-L-elsbetiae_contig7509:7448..76091622816834.9665642-CDS-L-elsbetiae_contig7509:7448..7609Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7509 7449..7609 +
1691683849.2692666-CDS-L-elsbetiae_contig7509:7448..76091691683849.2692666-CDS-L-elsbetiae_contig7509:7448..7609Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7509 7449..7609 +
1622816834.976478-CDS-L-elsbetiae_contig7509:8178..83751622816834.976478-CDS-L-elsbetiae_contig7509:8178..8375Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7509 8179..8375 +
1691683849.2813811-CDS-L-elsbetiae_contig7509:8178..83751691683849.2813811-CDS-L-elsbetiae_contig7509:8178..8375Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7509 8179..8375 +
1622816834.9871497-CDS-L-elsbetiae_contig7509:9057..91661622816834.9871497-CDS-L-elsbetiae_contig7509:9057..9166Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7509 9058..9166 +
1691683849.289971-CDS-L-elsbetiae_contig7509:9057..91661691683849.289971-CDS-L-elsbetiae_contig7509:9057..9166Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7509 9058..9166 +
1622816834.9982722-CDS-L-elsbetiae_contig7509:9543..95851622816834.9982722-CDS-L-elsbetiae_contig7509:9543..9585Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7509 9544..9585 +
1691683849.2993267-CDS-L-elsbetiae_contig7509:9543..95851691683849.2993267-CDS-L-elsbetiae_contig7509:9543..9585Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7509 9544..9585 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig7509.16404.1

>prot_L-elsbetiae_contig7509.16404.1 ID=prot_L-elsbetiae_contig7509.16404.1|Name=mRNA_L-elsbetiae_contig7509.16404.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=329bp
EEQAAIAQAVIVTDDVSWTLDARPTTPPPVPPEDATSRAESRAQVPPEEP
EPGSSSGSGSGSSSGGRRREGNSGGAPGPPPPPPRRLLRLVGGVDISFVK
GSHENACASLVVLEFPSLETVYEAYERVTMSFPYVSGFLAFREVDHLARL
VGQLRREQPDLEPDVLFVDGNGRLHPRGAGLACHLGVVTGLRTVGLGKTF
SQVDGLTKGGVRERVRTLLAEGEREMPLVGASGTVWGTALVPKEEGGRKV
GVVTNPIFVSIGHRVSLETCVTLTKAVGRYRVPEPIRQADMRSREVIREW
LLEHTEQEEKAEPRESGLGRPPPPPPPPP
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mRNA from alignment at L-elsbetiae_contig7509:5655..9585+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig7509.16404.1 ID=mRNA_L-elsbetiae_contig7509.16404.1|Name=mRNA_L-elsbetiae_contig7509.16404.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3931bp|location=Sequence derived from alignment at L-elsbetiae_contig7509:5655..9585+ (Laminarionema elsbetiae ELsaHSoW15)
GAGGAGCAGGCCGCGATCGCCCAAGCCGTCATCGTCACCGACGACGTGTC
TTGGACGCTTGACGCCAGACCCACGACACCGCCTCCAGTCCCCCCAGAAG
ACGCCACAAGCCGTGCAGAGAGCCGTGCCCAGGTCCCGCCAGAGGAGCCG
GAGCCGGGAAGCAGCAGCGGTAGCGGTAGCGGTAGCAGTAGCGGAGGCAG
ACGCCGGGAAGGAAATAGCGGCGGTGCACCCGGCCCGCCGCCGCCGCCGC
CGCGCCGTCTACTCAGGCTGGTCGGAGGCGTGGACATCTCCTTTGTGAAG
GGGAGCCACGAAAACGCCTGCGCGAGCCTGGTCGTCCTGGAGTTTCCCTC
CCTGGAAACCGTGTACGAGGCGTACGAGAGAGTCACCATGAGCTTCCCCT
ACGTGTCAGGGTTCTTGGCGTTTCGGGAGGTAGGTATACCTCCAAACGGA
GGCGTTTTCATCCAGAAGAAATCAAGGTTAGAATTAGAGATCTTTGAGTG
TGGCTGGTGAGCGGGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
GGGGCGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
GGGATACTGNNNNTTGTATGGTGGTGTTTTTTGTGAATGAGATTTTTTGG
GGGGGGTTTTGGTTTGTTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
GGGGGGGGGTTGAGCGGGGACGGGGCGCCGTCGTTGGCATTGGGACCTTG
CTAAGGTTGATGAAGCTGGTACGCTTGAAAGCTCTGTCTCGGCCTTTCTT
TGCCGAGCCTTGCGGCCGGCGAATGAGGTCGGCGTGTGCCTCCTTGCAGG
GAACCAACCGCCTCGGAGCGGCGGGGCAGAGAGCGAGAGCAGGGAAGCGC
CATCGTGCGGCCCAGGTCGAATACCCACATCCGTACACTTCTCTCGCCTC
AGCCCCGACGCCAACCAGTTTTCTTCGACCAAGGACCGCAGAACTAACTC
CTCGTGTGTGCTTCCCCCGTCGCCGGTTTGGCAGGTGGACCACCTGGCGC
GATTAGTGGGGCAGCTCAGGCGAGAACAGCCAGGTGCGATGTTTGAGGAC
GGGGTCGAGACACGCGAGACCTTGGCGACAGAGAAAACTGAGAGCTCCAC
CGCTGCTGTGTTGGTAGCCAACGTACGTATCGCGCAAGCGAAATTTGAAA
AAATTCTCAACATAAAAACGATATCACGTCCCGAAAGCAGTGCGGCAAAA
AGCTATTGTTGTTGTCTATGTACTTCGAAGTGCGTTTTTGATTCCGCTAG
CAATCAGACCTTGCCGAGACACAGAATAGGTTTTTGCCGCTGTCAAGGCC
CGTTGCCGATGTGGTGGGCACTTCGCCTACACCTGGAGGGCAACCCTCCA
TCCCGTCGTGTACGAAAACCGACACATATGTGCCCTTGCTGCTGTGCCCG
TGGTTGGTGCGTTGTTCGGCGTATCTCTCTGGTTTTGCGCCTGTCGTGCA
GGTATGCACGCCTTTGTGTCGTCTTCTATTAGACTACTGTTGTATGTGTG
TTTTTCGTCCCGTGCGTTCGGGCGTCTGTCCACACGTTTCGGTGCGGTGT
GCTACACGTTTCGGTGCATGCTTCCTGCACATACAACGAGACGTATCCGC
CGGGGTCCCACAGGAAGGGGTTAAGCACCGGGCCTTTTTTTTTTAAGACT
CTCACGTCGATAATCCATCTATGTAACTCTTTGGTACAACGTTGGTCCAT
CCTCCTCTCCTTTTACGTTTTTATGCCGCCCCGTTCGTGCCAAGATCTGG
AGCCAGACGTCTTATTTGTCGACGGGAACGGGCGGCTTCACCCCAGAGGG
GCGGGGCTGGCGTGCCACCTAGGCGTCGTGACGGGCCTGCGAACGGTGGG
TCTGGGTAAGACGTTCTCGCAGGTCGACGGGCTAACGAAGGGCGGCGTGC
GAGAGGTGCGGTGCGTTAAACTGCTACATACTATTGTCTGTGTGTGCATA
AATATGTAGCGGGCGACCAACTTGCTCCGTTTTTTTCTCAAGGCGGCATG
ACATACTGGGTACTCGGCGGGGCATGTTTCTATGAAGTTCCATTGTGACT
GCGCAGAGCACCGGCCCGGGGGAAATGCCCCCGGCTTGCCCAGTTTTTGC
TACTTCCCTTAGATTATAGCTAACATAGCTTGTGAACGCTTGGACATGTG
TGCATGAGTCTGCTCCGGCTTGTCTGTAGCATGCCGTCACAGCACGGAGG
TTTTCTCCGCACAAGCAATACTTCGAAGTATACGACATGCCTACCAAAAC
GTGAGCAACCTAAACTGAAATACCGTCTGGGGGAACTTACTGCTCTAGTT
ACCGCTGTTACTGCGAATGCCACCCAGCTCTATAGGAGTAACTTACCGCT
GCCACGAAGAAAGCACAGAAACATCCCACCCAACCCCGAACGAACTTTTC
TCAGACAAAATCTTTTTTTCTCCCTGCCCCCCCCCCCCCCCCCCCCCCCC
TGGGCTATCCGTCACACGTTACAGAGAGTCCGGACCCTCCTCGCGGAGGG
GGAGCGCGAAATGCCGCTGGTGGGTGCGTCCGGGACGGTGTGGGGAACGG
CGCTGGTGCCGAAGGAGGAGGGAGGGAGGAAGGTCGGCGTCGTCACCAAT
CCCATATTTGTTTCAATCGGGCACAGGGTTTCCTTGGAGACCTGCGTGAC
CTTGACCAAGGCGGTGGGAAGGTGTGCGCACGTTTTGTTCGCTTTCATGA
AATTCTCAAAACATGTATGTACACGTTTTTTTTTGTTCGGGCAACCAGTG
CTCTGTGGACCCTTCGAGTTGATTTTGTTTCTTCTCTTTTTTCAGTATAG
TAATATACTCTTTTTTAGGGTATGTTATCCTGTGACCACGGGAATCGACC
GCATCAGTGTTCGTACGGGGTGAATGAAGACAACAACAACAACAACAACA
ACAACAACAACAACAACAACAACAACAACGGGTGCCTTCAGCAAATGCGG
CTCTGTTTTGACGAGTCAATGGAGGCAGACCCCAGGGAAAGTCCGCGTGC
TTTTCTTTCCAACTCGTGTATTGTCGACCGAATCGGTCAAGGTTGGAGAA
CGTTCTGTTGCTTCTCTAAAGGATTGCTGGCCGTGCCGCCGCTTTAGCCT
TTGAGTATCGATTTGTGCCTTTTGTGATTCAAACAAATAGGTGCTTTGCT
AAGTGACGGTTATGTTTACGTTTGTTTTGAAAAATACTTTTGATATGCAT
GTAAACAGACTCAGAAGTGGATGTACTTGTTTGGAATGCCGCGTTGCATT
CTGAGTGCGAAAGGTAGACACATCCCGTAAGATCCAACTGTGAATTTGAG
ACAACGGCGACCAATGTCTGCATCGTTTGGCGTACGTGTCTCGCTCGACC
CAGGTATCGCGTGCCAGAGCCCATCCGCCAGGCCGATATGCGCAGCAGAG
AGGTCATCCGGGAGTGGCTGCTTGAGCACACAGAGCAAGAGGAGAAAGCC
GAGCCCAGAGAGGTCCCGGCATCATCACCACGATGAGAGAGTATCACGAG
AACAAGTCGCACGGTAGTCCTATGAGGGGAGGAAAGTGGGGCCACCGCCC
ACCGTCGGCGTTTCTTGTTGAGGGTGCAAATACAGAACCACAGATAAGAC
AAACGGGGTCCTGACGGCAGAATGACAGGACACTGCAGAAGACAAACGAA
ATGAAAAGATGAACAGATATGCTTCCTGCAGCAACGCCCCCAATTCTGAA
AAGTGGCTGTGGGGAATCTTTCACTCTATTTCCTAGATAAATACCCCCCC
CTGCTGCCCCCACAGCTCTTTTTGAGAATTAGGGGCTCTTTTGCAGGAAT
CCCATAGAGGACGACGGCCGAGGCTTACAGTAGTAGTAGTCGGGATTGGG
TCGCCCCCCGCCCCCCCCCCCCCCCCCCCCC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig7509:5655..9585+

>mRNA_L-elsbetiae_contig7509.16404.1 ID=mRNA_L-elsbetiae_contig7509.16404.1|Name=mRNA_L-elsbetiae_contig7509.16404.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1974bp|location=Sequence derived from alignment at L-elsbetiae_contig7509:5655..9585+ (Laminarionema elsbetiae ELsaHSoW15)
GAGGAGCAGGCCGCGATCGCCCAAGCCGTCATCGTCACCGACGACGTGTC
TTGGACGCTTGACGCCAGACCCACGACACCGCCTCCAGTCCCCCCAGAAG
ACGCCACAAGCCGTGCAGAGAGCCGTGCCCAGGTCCCGCCAGAGGAGCCG
GAGCCGGGAAGCAGCAGCGGTAGCGGTAGCGGTAGCAGTAGCGGAGGCAG
ACGCCGGGAAGGAAATAGCGGCGGTGCACCCGGCCCGCCGCCGCCGCCGC
CGCGCCGTCTACTCAGGCTGGTCGGAGGCGTGGACATCTCCTTTGTGAAG
GGGAGCCACGAAAACGCCTGCGCGAGCCTGGTCGTCCTGGAGTTTCCCTC
CCTGGAAACCGTGTACGAGGCGTACGAGAGAGTCACCATGAGCTTCCCCT
ACGTGTCAGGGTTCTTGGCGTTTCGGGAGGAGGAGCAGGCCGCGATCGCC
CAAGCCGTCATCGTCACCGACGACGTGTCTTGGACGCTTGACGCCAGACC
CACGACACCGCCTCCAGTCCCCCCAGAAGACGCCACAAGCCGTGCAGAGA
GCCGTGCCCAGGTCCCGCCAGAGGAGCCGGAGCCGGGAAGCAGCAGCGGT
AGCGGTAGCGGTAGCAGTAGCGGAGGCAGACGCCGGGAAGGAAATAGCGG
CGGTGCACCCGGCCCGCCGCCGCCGCCGCCGCGCCGTCTACTCAGGCTGG
TCGGAGGCGTGGACATCTCCTTTGTGAAGGGGAGCCACGAAAACGCCTGC
GCGAGCCTGGTCGTCCTGGAGTTTCCCTCCCTGGAAACCGTGTACGAGGC
GTACGAGAGAGTCACCATGAGCTTCCCCTACGTGTCAGGGTTCTTGGCGT
TTCGGGAGGTGGACCACCTGGCGCGATTAGTGGGGCAGCTCAGGCGAGAA
CAGCCAGGTGGACCACCTGGCGCGATTAGTGGGGCAGCTCAGGCGAGAAC
AGCCAGATCTGGAGCCAGACGTCTTATTTGTCGACGGGAACGGGCGGCTT
CACCCCAGAGGGGCGGGGCTGGCGTGCCACCTAGGCGTCGTGACGGGCCT
GCGAACGGTGGGTCTGGGTAAGACGTTCTCGCAGGTCGACGGGCTAACGA
AGGGCGGCGTGCGAGAGATCTGGAGCCAGACGTCTTATTTGTCGACGGGA
ACGGGCGGCTTCACCCCAGAGGGGCGGGGCTGGCGTGCCACCTAGGCGTC
GTGACGGGCCTGCGAACGGTGGGTCTGGGTAAGACGTTCTCGCAGGTCGA
CGGGCTAACGAAGGGCGGCGTGCGAGAGAGAGTCCGGACCCTCCTCGCGG
AGGGGGAGCGCGAAATGCCGCTGGTGGGTGCGTCCGGGACGGTGTGGGGA
ACGGCGCTGGTGCCGAAGGAGGAGGGAGGGAGGAAGGTCGGCGTCGTCAC
CAATCCCATATTTGTTTCAATCGGGCACAGGGTTTCCTTGGAGACCTGCG
TGACCTTGACCAAGGCGGTGGGAAGAGAGTCCGGACCCTCCTCGCGGAGG
GGGAGCGCGAAATGCCGCTGGTGGGTGCGTCCGGGACGGTGTGGGGAACG
GCGCTGGTGCCGAAGGAGGAGGGAGGGAGGAAGGTCGGCGTCGTCACCAA
TCCCATATTTGTTTCAATCGGGCACAGGGTTTCCTTGGAGACCTGCGTGA
CCTTGACCAAGGCGGTGGGAAGGTATCGCGTGCCAGAGCCCATCCGCCAG
GCCGATATGCGCAGCAGAGAGGTCATCCGGGAGTGGCTGCTTGAGCACAC
AGAGCAAGAGGAGAAAGCCGAGCCCAGAGAGGTATCGCGTGCCAGAGCCC
ATCCGCCAGGCCGATATGCGCAGCAGAGAGGTCATCCGGGAGTGGCTGCT
TGAGCACACAGAGCAAGAGGAGAAAGCCGAGCCCAGAGAGTCGGGATTGG
GTCGCCCCCCGCCCCCCCCCCCCCCCCCCCCCTCGGGATTGGGTCGCCCC
CCGCCCCCCCCCCCCCCCCCCCCC
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