mRNA_L-elsbetiae_contig7496.16386.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig7496.16386.1
Unique NamemRNA_L-elsbetiae_contig7496.16386.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig7496.16386.1 vs. uniprot
Match: D8LCU0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCU0_ECTSI)

HSP 1 Score: 295 bits (755), Expect = 5.200e-99
Identity = 142/164 (86.59%), Postives = 148/164 (90.24%), Query Frame = 1
Query:  292 MNGIKLLKSDGWSCGTRGGATVYIFEYDRRFDQAYPESFVYYDFNEPLAVPDELRGSVDYILMDPPYLNPECVGKFLETADAIARRPRATXXXXXXXXXKEESESRVTPMMFITSPLNHAYLRENMGLRRTPFQLAFKSKFATPMSLYTNYPSDALGGWVEEED 783
            MNGIKLLKSDGW+CG  GGATVYIFEYDRRFDQAYPESFVYYDFNEPLAVPD+LRGSVDYILMDPPYLNPEC+GKFLETAD IARRPRA          KEE+   VTPMMFITSPLNHAYLRENMGLRRTP+QLAFKSKFATPMSLYTNYPSDALGGWVEEE+
Sbjct:    1 MNGIKLLKSDGWTCGAGGGATVYIFEYDRRFDQAYPESFVYYDFNEPLAVPDDLRGSVDYILMDPPYLNPECIGKFLETADVIARRPRAAVAGDGDG--KEEAAPPVTPMMFITSPLNHAYLRENMGLRRTPYQLAFKSKFATPMSLYTNYPSDALGGWVEEEE 162          
BLAST of mRNA_L-elsbetiae_contig7496.16386.1 vs. uniprot
Match: A0A835ZDP6_9STRA (Putative N6-adenine methyltransferase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDP6_9STRA)

HSP 1 Score: 159 bits (402), Expect = 1.700e-45
Identity = 80/163 (49.08%), Postives = 105/163 (64.42%), Query Frame = 1
Query:  292 MNGIKLLKSDGWSCGTRGGATVYIFEYDRRFDQAYPESFVYYDFNEPLAVPDELRGSVDYILMDPPYLNPECVGKFLETADAIARRPRATXXXXXXXXXKEESESRVTPMMFITSPLNHAYLRENMGLRRTPFQLAFKSKFATPMSLYTNYPSDALGGWVEEE 780
            MNG+  L       G      V+IFEYD RF +AYP  FV YD+N PL VP+ LRG+ DY+L DPPYLNP+CV +F +T   +AR P +              ++ VTPMMF+TSP NHA L  +MG+RRTPFQ+ F+SKFATP++++ NY S  LG +V E+
Sbjct:    1 MNGMMALPQGQQRSG------VHIFEYDARFGKAYPVQFVQYDYNHPLDVPEHLRGACDYVLADPPYLNPQCVTEFFQTMQLLARVPWSADAAP---------DAEVTPMMFVTSPRNHAQLLRDMGMRRTPFQVKFQSKFATPIAIFLNYRSTRLGDFVHED 148          
BLAST of mRNA_L-elsbetiae_contig7496.16386.1 vs. uniprot
Match: A0A6G0XCF8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XCF8_9STRA)

HSP 1 Score: 153 bits (386), Expect = 2.300e-42
Identity = 92/235 (39.15%), Postives = 127/235 (54.04%), Query Frame = 1
Query:   70 LSADTLAALNAHLAVKDAVEVEEGAPEGAKGTFVTEDFGLSQFWYDDDTQRAMAREVLIEAGGGRAAIISAPSVMNGIKLLKSDGWSCGTRGGATVYIFEYDRRFDQAYPESFVYYDFNEPLAVPDELRGSVDYILMDPPYLNPECVGKFLETADAIARRPRATXXXXXXXXXKEESESRVTPMMFITSPLNHAYLRENMGLRRTPFQLAFKSKFATPMSLYTNYPSDALGGWVE 774
            LSA+TLAAL+AHLA   AV  EE        T ++EDF LSQFWYDD T   +ARE L ++ GG  A +S P+    +K L+ +           VYIFEYD RF   YP+ FV+YD+  PLAV  +  G  DY+L++PPYL  +C+  F ET   I+R  + T             +   TP +FI +      +RE +GL  + F   F+SK +  ++ Y NY S+  G + E
Sbjct:   12 LSAETLAALHAHLA---AVNTEES-------TDISEDFRLSQFWYDDKTGETLAREALEKSKGGPIAFLSTPAAFKALKKLEPER--------KDVYIFEYDHRFGDKYPDEFVFYDYIAPLAVDSKFHGFFDYVLVEPPYLTEQCLKGFGETMRLISRELKKTASG---------KQVMATPNVFINTGNLRDVMREELGLEPSGFVPTFESKLSNRLTTYINYDSERFGPYEE 219          
BLAST of mRNA_L-elsbetiae_contig7496.16386.1 vs. uniprot
Match: A0A3R7K1S2_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7K1S2_9STRA)

HSP 1 Score: 150 bits (380), Expect = 2.560e-41
Identity = 88/236 (37.29%), Postives = 125/236 (52.97%), Query Frame = 1
Query:   70 LSADTLAALNAHLAVKDAVEVEEGAPEGAKGTFVTEDFGLSQFWYDDDTQRAMAREVLIEAGGGRAAIISAPSVMNGIKLLKSDGWSCGTRGGATVYIFEYDRRFDQAYPESFVYYDFNEPLAVPDELRGSVDYILMDPPYLNPECVGKFLETADAIARRPRATXXXXXXXXXKEESESRVTPMMFITSPLNHAYLRENMGLRRTPFQLAFKSKFATPMSLYTNYPSDALGGWVEE 777
            LSADTLAAL AHL  + A          A+   V+EDF LSQFWYDD T R +A+E +  +     A +S P+       LK    S     G  V++FE+DRRFD+ Y + FV+YD+N P  +P++     DY+L+DPPYLNP C+GKF ET   ++R   A            +++  + P  FIT+ +    +  ++G   + F   F+SK +     YTNY S+  G   EE
Sbjct:    9 LSADTLAALQAHLQSQQA----------AQDANVSEDFRLSQFWYDDKTGRTLAQEAVDHSKDKHIAFVSTPAAYR--DFLKIQEESDTPINGDNVFLFEFDRRFDEKYGDHFVFYDYNTPTELPEKFHHFFDYVLVDPPYLNPNCMGKFAETMRWLSRDVEAVTG---------QNDKILNPCTFITARMLRKNIYADLGFTPSGFYPTFESKLSNQFLTYTNYRSECFGESTEE 223          
BLAST of mRNA_L-elsbetiae_contig7496.16386.1 vs. uniprot
Match: W2PIG9_PHYPN (Uncharacterized protein n=16 Tax=Phytophthora TaxID=4783 RepID=W2PIG9_PHYPN)

HSP 1 Score: 150 bits (379), Expect = 3.520e-41
Identity = 90/235 (38.30%), Postives = 124/235 (52.77%), Query Frame = 1
Query:   70 LSADTLAALNAHLAVKDAVEVEEGAPEGAKGTFVTEDFGLSQFWYDDDTQRAMAREVLIEAGGGRAAIISAPSVMNGIKLLKSDGWSCGTRGGATVYIFEYDRRFDQAYPESFVYYDFNEPLAVPDELRGSVDYILMDPPYLNPECVGKFLETADAIARRPRATXXXXXXXXXKEESESRVTPMMFITSPLNHAYLRENMGLRRTPFQLAFKSKFATPMSLYTNYPSDALGGWVE 774
            LSADTLAAL AHL  + A           K   V+EDF LSQFWYDD T RA+A+E + ++   R A +S P+       LK    S     G  V++FEYDRRFD+ Y   FV+Y++NEP  +PD+     DY+L+DPPYLN  C+GKF ET   +A+   +            +    +TP  FIT+ +    +  ++G   + F   F+SK +     YTNY S+  G   E
Sbjct:    9 LSADTLAALQAHLQTQQA----------QKDAAVSEDFRLSQFWYDDRTGRALAQEAIDQSKEKRIAFVSTPAAYR--DFLKIQEESDSPIKGDNVFLFEYDRRFDEKYSGHFVFYNYNEPTNLPDKFHHFFDYVLVDPPYLNTNCMGKFAETMRWLAKDVESVPG---------KKAKILTPCTFITARMLRKDIYADLGFTPSGFTPTFESKLSNQFLTYTNYRSERFGESTE 222          
BLAST of mRNA_L-elsbetiae_contig7496.16386.1 vs. uniprot
Match: H3GGL5_PHYRM (Uncharacterized protein n=13 Tax=Phytophthora TaxID=4783 RepID=H3GGL5_PHYRM)

HSP 1 Score: 150 bits (379), Expect = 3.720e-41
Identity = 93/247 (37.65%), Postives = 131/247 (53.04%), Query Frame = 1
Query:   52 EITLDSLSADTLAALNAHLAVKDAVEVEEGAPEGAKGTFVTEDFGLSQFWYDDDTQRAMAREVLIEAGGG-RAAIISAPSVMNGIKLLKSDGWSCGTRG--GATVYIFEYDRRFDQAYPESFVYYDFNEPLAVPDELRGSVDYILMDPPYLNPECVGKFLETADAIARRPRATXXXXXXXXXKEESESRVTPMMFITSPLNHAYLRENMGLRRTPFQLAFKSKFATPMSLYTNYPSDALGGWVEEED 783
            E+    LSA+TLAAL AHL  +     EE AP       V+EDF LSQFWYDD T RA+A+E +  +    R A +S P+       L+S+      R   G  VYIFE+DRRF + Y + F +YD+N P  +PD+     DY+LM+PP+L+P+C+ KF +T   +AR                + +  + P  FI S L    +R ++G   T F  +F+SK +  +  YTNY S+  G   EE D
Sbjct:    3 ELLASELSAETLAALQAHLLER---HQEEDAP-------VSEDFRLSQFWYDDKTGRALAQEAIDHSSSELRIAFVSTPAAYRDFLKLQSEEQDEAKRVAMGENVYIFEFDRRFGEKYGDRFCFYDYNAPTDLPDKFHHFFDYVLMEPPHLSPDCLAKFSDTMRWLAR---------DVDKVPGKKDRVMNPSTFINSQLLRKEMRADLGFTPTGFYPSFESKLSNHLLTYTNYASERFGPCEEEPD 230          
BLAST of mRNA_L-elsbetiae_contig7496.16386.1 vs. uniprot
Match: A0A485LNA9_9STRA (Aste57867_23683 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LNA9_9STRA)

HSP 1 Score: 147 bits (372), Expect = 3.040e-40
Identity = 94/237 (39.66%), Postives = 127/237 (53.59%), Query Frame = 1
Query:   70 LSADTLAALNAHLAVKDAVEVEEGAPEGAKGTFVTEDFGLSQFWYDDDTQRAMAREVLIEAGGGRAAIISAPSVMNGIKLLKSDGWSCGTRGGATVYIFEYDRRFDQAYPESFVYYDFNEPLAVPDELRGSVDYILMDPPYLNPECVGKFLETADAIARRPRATXXXXXXXXXKEESESRV--TPMMFITSPLNHAYLRENMGLRRTPFQLAFKSKFATPMSLYTNYPSDALGGWVE 774
            LS +TLAAL AHLA    V+VE+      K   V+EDF LSQFWYDD T  A+ARE L ++ GG  A +S P+    +K L+ +           VYIFEYD RF Q Y + FV+YD+N PL V  +     DY+L++PPYL   C+  F ET   I+R+             +EE +  V  TP +FI S      + E +GL  + F   F+SK +  ++ Y NY SD  G + E
Sbjct:    9 LSPETLAALQAHLAT---VQVEDAVASTEKD--VSEDFRLSQFWYDDVTGEALAREALEKSKGGPIAFLSTPAAFKALKKLEPER--------KDVYIFEYDHRFGQKYGDQFVFYDYNAPLDVDAKFHKFFDYVLVEPPYLTETCMKGFGETMRLISRQ-----------VTREEGQKDVLVTPNVFINSGALREAMFEELGLTPSGFVPTFESKLSNRLTTYINYESDRFGKYDE 221          
BLAST of mRNA_L-elsbetiae_contig7496.16386.1 vs. uniprot
Match: A0A3R6VQU9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6VQU9_9STRA)

HSP 1 Score: 145 bits (365), Expect = 3.290e-39
Identity = 95/244 (38.93%), Postives = 131/244 (53.69%), Query Frame = 1
Query:   52 EITLDSLSADTLAALNAHLAVKDAVEVEEGAPEGAKGTFVTEDFGLSQFWYDDDTQRAMAREVLIEAGGGRAAIISAPSVMNGIKL---LKSDGWSCGTRGGATVYIFEYDRRFDQAYPESFVYYDFNEPLAVPDELRGSVDYILMDPPYLNPECVGKFLETADAIARRPRATXXXXXXXXXKEESESRVTPMMFITSPLNHAYLRENMGLRRTPFQLAFKSKFATPMSLYTNYPSDALGGWVE 774
            ++    LSA+TLAAL AHLA   AV++ E A +      V+EDF LSQFWYDD T   +ARE L ++ GG  A +S P+    +K+   L+ D           VYIFEYD RF Q Y + FV+YD+N PL V +   G  DY+L++PPYL  +C+  F +T + I+R  + T          E  +  VTP  FI S L  A   E +GL    F   F+SK +  ++ Y NY S   G + +
Sbjct:    4 DLLASELSAETLAALQAHLA---AVQIVEDADDE-----VSEDFRLSQFWYDDVTGETLAREALEKSKGGPIAFLSTPAAYKALKVCVKLEPDR--------PNVYIFEYDHRFGQKYGDEFVFYDYNAPLDVEERFHGFFDYVLVEPPYLTEQCMKGFGQTMNLISREVKTTP---------EGKQVMVTPNAFINS-LRDAMATE-LGLTPCGFVPTFESKLSNRLTTYINYTSTRFGPYED 220          
BLAST of mRNA_L-elsbetiae_contig7496.16386.1 vs. uniprot
Match: A0A6G0WNY0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WNY0_9STRA)

HSP 1 Score: 143 bits (360), Expect = 1.740e-38
Identity = 86/237 (36.29%), Postives = 123/237 (51.90%), Query Frame = 1
Query:   70 LSADTLAALNAHLAVKDAVEVEEGAPEGAKGTFVTEDFGLSQFWYDDDTQRAMAREVLIEAGGGRAAIISAPSVMNGIKLLKSDGWSCGTRGGATVYIFEYDRRFDQAYPESFVYYDFNEPLAVPDELRGSVDYILMDPPYLNPECVGKFLETADAIARRPRATXXXXXXXXXKEESESRV-TPMMFITSPLNHAYLRENMGLRRTPFQLAFKSKFATPMSLYTNYPSDALGGWVEE 777
            LSA+TLAAL AHLA     E  E          V+EDF LSQFWYD  T  A+A E L E+ GG  A +S P+    +K ++ D           VY+FEYD RF++ YP  FV+YD+N PL +  +      Y+L+DPPYLN  C+ KF +T   +++                +S+ R+ TP  FIT+ +    + +++G   + F   F+SK +     YTNY S+  G   E+
Sbjct:    8 LSAETLAALQAHLATAKLNEESE----------VSEDFRLSQFWYDKKTGDALALEALEESNGGPIAFVSTPAAFKALKAIEPDR--------KDVYLFEYDHRFEEKYPMEFVFYDYNTPLEIDAKFHHFFSYVLVDPPYLNVNCMSKFAQTMRWLSK--------------DVDSQGRIQTPNAFITAQMLRKDIYKDLGFTPSGFIPTFESKLSNQFLTYTNYTSERFGPCDED 212          
BLAST of mRNA_L-elsbetiae_contig7496.16386.1 vs. uniprot
Match: A0A0P1AD01_PLAHL (N-adenine-specific dna methyltransferase 2 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AD01_PLAHL)

HSP 1 Score: 143 bits (360), Expect = 2.420e-38
Identity = 90/238 (37.82%), Postives = 120/238 (50.42%), Query Frame = 1
Query:   70 LSADTLAALNAHLAVKDAVEVEEGAPEGAKGTFVTEDFGLSQFWYDDDTQRAMAREVLIEAGGGRAAIISAPSVMNGIKLLKSDGWSCGTRGGATVYIFEYDRRFDQAYPESFVYYDFNEPLAVPDELRGSVDYILMDPPYLNPECVGKFLETADAIARRPRATXXXXXXXXXKEESESRVTPMMFITSPLNHAYLRENMGLRRTPFQLAFKSKFATPMSLYTNYPSDALGGWVEEED 783
            LSADTLAAL AH+           A      T VTE+F LSQFWYDD T RA+A+E + ++   R A +SAP+       LK    S        V++FEYDRRFD  Y   FV+YD+N+P  +PD+     DYILMDPPYL   C+ K+ ET   +A    +              E  ++P  FIT+ +    +   +G   + F   F+SK + P   YTNY S+  G   E  D
Sbjct:    9 LSADTLAALKAHIQ----------AHLTQNDTSVTENFRLSQFWYDDQTGRALAQEAIDQSKAKRIAFVSAPAAYR--DFLKIQNESDSPIISDNVFLFEYDRRFDAKYNGHFVFYDYNDPTNLPDKFHHFFDYILMDPPYLTVSCMSKYAETMRWLANDVISGPGC---------KEKILSPCTFITARMLRKQIYTELGFTPSGFVPTFESKLSNPFLTYTNYHSERFGKIAEVFD 225          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7496.16386.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCU0_ECTSI5.200e-9986.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZDP6_9STRA1.700e-4549.08Putative N6-adenine methyltransferase-domain-conta... [more]
A0A6G0XCF8_9STRA2.300e-4239.15Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A3R7K1S2_9STRA2.560e-4137.29Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
W2PIG9_PHYPN3.520e-4138.30Uncharacterized protein n=16 Tax=Phytophthora TaxI... [more]
H3GGL5_PHYRM3.720e-4137.65Uncharacterized protein n=13 Tax=Phytophthora TaxI... [more]
A0A485LNA9_9STRA3.040e-4039.66Aste57867_23683 protein n=1 Tax=Aphanomyces stella... [more]
A0A3R6VQU9_9STRA3.290e-3938.93Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A6G0WNY0_9STRA1.740e-3836.29Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A0P1AD01_PLAHL2.420e-3837.82N-adenine-specific dna methyltransferase 2 n=1 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig7496contigL-elsbetiae_contig7496:1767..5203 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score296.2
Seed ortholog evalue1.5e-77
Seed eggNOG ortholog2880.D8LCU0
Preferred nameEFM5
KEGG koko:K03953,ko:K16546
KEGG TC3.D.1.6
KEGG Pathwayko00190,ko01100,ko04714,ko04723,ko04932,ko05010,ko05012,ko05016,map00190,map01100,map04714,map04723,map04932,map05010,map05012,map05016
KEGG ModuleM00146
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016278,GO:0016279,GO:0016740,GO:0016741,GO:0018022,GO:0018023,GO:0018193,GO:0018205,GO:0019538,GO:0032259,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0140096,GO:1901564
EggNOG free text desc.methyltransferase activity
EggNOG OGsKOG3350@1,KOG3350@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03036
Ec32 ortholog descriptionS-adenosyl-L-methionine-dependent methyltransferase
Ec32 orthologEc-07_006880.1
Exons7
Model size786
Cds size786
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816833.1295462-CDS-L-elsbetiae_contig7496:1766..18951622816833.1295462-CDS-L-elsbetiae_contig7496:1766..1895Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7496 1767..1895 +
1691683847.8411171-CDS-L-elsbetiae_contig7496:1766..18951691683847.8411171-CDS-L-elsbetiae_contig7496:1766..1895Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7496 1767..1895 +
1622816833.1420507-CDS-L-elsbetiae_contig7496:2390..24611622816833.1420507-CDS-L-elsbetiae_contig7496:2390..2461Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7496 2391..2461 +
1691683847.8603783-CDS-L-elsbetiae_contig7496:2390..24611691683847.8603783-CDS-L-elsbetiae_contig7496:2390..2461Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7496 2391..2461 +
1622816833.1551929-CDS-L-elsbetiae_contig7496:2634..27401622816833.1551929-CDS-L-elsbetiae_contig7496:2634..2740Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7496 2635..2740 +
1691683847.8777387-CDS-L-elsbetiae_contig7496:2634..27401691683847.8777387-CDS-L-elsbetiae_contig7496:2634..2740Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7496 2635..2740 +
1622816833.1713638-CDS-L-elsbetiae_contig7496:3292..33961622816833.1713638-CDS-L-elsbetiae_contig7496:3292..3396Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7496 3293..3396 +
1691683847.8913016-CDS-L-elsbetiae_contig7496:3292..33961691683847.8913016-CDS-L-elsbetiae_contig7496:3292..3396Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7496 3293..3396 +
1622816833.1826835-CDS-L-elsbetiae_contig7496:4191..42761622816833.1826835-CDS-L-elsbetiae_contig7496:4191..4276Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7496 4192..4276 +
1691683847.9015987-CDS-L-elsbetiae_contig7496:4191..42761691683847.9015987-CDS-L-elsbetiae_contig7496:4191..4276Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7496 4192..4276 +
1622816833.195397-CDS-L-elsbetiae_contig7496:4755..48941622816833.195397-CDS-L-elsbetiae_contig7496:4755..4894Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7496 4756..4894 +
1691683847.9128366-CDS-L-elsbetiae_contig7496:4755..48941691683847.9128366-CDS-L-elsbetiae_contig7496:4755..4894Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7496 4756..4894 +
1622816833.2054887-CDS-L-elsbetiae_contig7496:5051..52031622816833.2054887-CDS-L-elsbetiae_contig7496:5051..5203Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7496 5052..5203 +
1691683847.9236784-CDS-L-elsbetiae_contig7496:5051..52031691683847.9236784-CDS-L-elsbetiae_contig7496:5051..5203Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig7496 5052..5203 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig7496.16386.1prot_L-elsbetiae_contig7496.16386.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig7496 1767..5203 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig7496.16386.1

>prot_L-elsbetiae_contig7496.16386.1 ID=prot_L-elsbetiae_contig7496.16386.1|Name=mRNA_L-elsbetiae_contig7496.16386.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=262bp
MARSRSSSSSSSDGGPPEITLDSLSADTLAALNAHLAVKDAVEVEEGAPE
GAKGTFVTEDFGLSQFWYDDDTQRAMAREVLIEAGGGRAAIISAPSVMNG
IKLLKSDGWSCGTRGGATVYIFEYDRRFDQAYPESFVYYDFNEPLAVPDE
LRGSVDYILMDPPYLNPECVGKFLETADAIARRPRATTTGGGDDDGKEES
ESRVTPMMFITSPLNHAYLRENMGLRRTPFQLAFKSKFATPMSLYTNYPS
DALGGWVEEED*
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mRNA from alignment at L-elsbetiae_contig7496:1767..5203+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig7496.16386.1 ID=mRNA_L-elsbetiae_contig7496.16386.1|Name=mRNA_L-elsbetiae_contig7496.16386.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3437bp|location=Sequence derived from alignment at L-elsbetiae_contig7496:1767..5203+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGCTCGCTCCCGGTCATCGAGCAGCAGCTCCAGCGATGGAGGCCCTCC TGAAATCACGCTCGATTCTCTGTCGGCTGACACTTTGGCCGCACTCAACG CGCACCTGGCCGTGAAAGACGCAGTGGAGGTGTGTACAGCAGATGCGCCC CTTGTGGGCCAATCTAGACAGTCGTTTGCGTTCACAGCAATTCAGCAGTA CTCAAAGGGCAGGACGACAAAGACATACAGATATACATGGAGAGAGAAGG AGAGAGCGGGGCGGGGGAGAAAGAGAGAAGGCATGTGTACGCATGCACAC CAGACCGCAGCTATCAAGCGACACCACAGACCAGTACAGGCCCTGAACCC TGAACCAACCCGATGCAGTTTTTCCCACAGTCCCGCCACGCCTCTCACAG TCCCGCCACGCCTATTGTAAGCAACTTGAAACTTGACGTATCTACAGCAG CGGTAGGTGGGCTTTGCTTTTGAGTATGTGGGTAGTATTACGCTGATACA AATTGCTCTCGTATGTGGTCATCTGCGCTTGTAAGGGGGGAAAGAAATGG GATTATCGTCATTGGAAGCAACACATGCGAATTTGCTGCGTGTCCGCATG TCCACATGTCCACCCGGCCCGTAGGTGGAAGAGGGGGCTCCCGAGGGAGC TAAAGGCACGTTTGTAACGGAGGACTTCGGGCTGTCTCAGTTCTGGTGAG GCTACAGCCTTCAGTTCGCGCACGGAAAGAAACGATTGATAGCATCTGCC CGTGACTTTTTATTCAGTGGCTAGAGGCGTTCAAACGAGTTGTTGAGAGT TTTCAGCATGAGGTTGGTGTGTGCCCGTGCTGTGGGCGCTTGATGGTCGG GATTCATGAATGTTTCAGGTACGACGATGATACTCAGCGGGCGATGGCCA GAGAAGTGCTGATAGAGGCGGGAGGTGGAAGGGCGGCCATCATCAGCGCT CCGTCCGTGATGAACGGCATCAAGGTGATTTGGAAATGGAAATGTAGCAA GTCTGTGCTCCTCCCGGCCTTCTGGAAGGGTTTGGCTTCGGCAAGACTTT TATATTTGCTGCAAAGATCAATCTTGTTTTTTTTTAGGCGTTATTCCTGC TGCTCGTTGATGCCGCAGCGGTTGGTGAACTCGAACGGTGACAAGGGAAG TCTCCCTTTCCTGCCCCCCTCCCCCACGCCTTACCCGAATTTGATCGTTC GCCTTCTGAAGACGTGCCACGCCAAGGACACAGGATAACAAGGGGGGTAC CGTATTCCCTCTGTGTGCCCTCCCGCCCTATACGGCCGGCCGGGGTCGGT AGTGGTGACACGTACAAGCGGTGCATCATGCATCATGTATCAGATTGCCT GGGTAAGCTCCCGCCCCCGTAGTCAATCAAATCAAGCAAACGCGGCCTCT TGTCCCCCCTGCGTTGCTTGTCTCCCCAGCCCGCTGGTCCCCAACCCGCT GGTGCACGCTTTCGCGTGCTGTGTTGATGTACCTTATTTTTTCGCCGGCC TCCGAAACATGACTGAAACGCTGCAGTTGCTTAAATCGGACGGCTGGAGC TGCGGAACGCGGGGCGGGGCAACGGTGTACATCTTCGAGTACGACCGGCG CTTCGACCAGGCGTATCCGGAATCCTTTGTGTGAGTTATAGTGAGCACCG GGTAGGGTTCGTCGCCATACAGCATAAATCCTTGTGTTGGGGGTTCGCCA GGAATCCAGGAATGTGCGAGGCTACGGGGGTCATGCTGAGTTGGAGAAGT TCCGCAGCACGTTGAGAAGTGCTTCCAACAACAGTTGACGATTCATGTTT TATGAACGAGTCGGTGCGAATGCACGGTCTCCGCACAGCAGCTAGAGGTG ACCACAGATCATAACCTAATCTTGAGGTACAGAGTGATAAAAAATGGTGC TGTAATCGCTCTGGTGAACTGAGACCCAGGTTCTACGAAGCAGATGCTAC GTCGAGAGCAACAACGCCGAGTGTTGTGTTGTAGGATTCCCCTCCACGGG TATCCTTCCATTCGGATAAACTATCCGCCTGAAAACTTGTTGGCCGACCT CGCAAATCTTTAAAATCTTTGCAGGGGAGATATTGAACTCTTCTGATATT TTACGTTGTTTTTCTGCTCGTTTCGCCATTACGTCACTGTATGGAATACC GTTTGAACCCCATATCAAGTCCTTGCTCTAGTGTGGGGTAGGTTCCATCT TTGATTCATTGTTTATTTTTTAATAAATGGGACGACACGGCCGCGTCTCG TTTCCTGCCTTTGTGTACCGAAATAAGCCACGCGAGCGCTAAAAATCGGC GCCATGGGAAAGAAAGGTGCCAGGGGTCGTACCATGTCTCAAACAGTACG ATTGAAGGATGCAGTATAGCGGCCGTTTGAGCACGCTCCCTCGTCCATAA CGCTGTCGCGACGGTCACAACACAGGTACTACGATTTTAACGAGCCTCTT GCGGTTCCCGACGAGCTTCGAGGTTCGGTGGACTACATTCTCATGGACCC TCCCTACCTGGTGAGAGACGGGGCCGAGGCGTGGAGGCTGAGAGGCAGGA GGAGGGAACAGAGTGGGGGATATGAACTAGGGAGGGAGAGGCCGGAAGGG TGGGGAACGGTTCACCCTGATGGGCAGATGGAGAGAGATGGGGCCAGGGG AGATACGGTACCACACGCGAGACTCTGTGTAACACTGGCTATTTGCCATG TTTTTTTTAACAAAACTAGATAACATGGCGTCATCCTGCCGCAGACAGTT CTAGCCGTTCTGCTTTTGTCGTGTTGGTTCATGTGTCTACCTCGTAGACA TATTTTGCAGAAGCCTACGCTTCTACACATGATCCAAATTCTCTACAATA TATCCAGAGCGTTGACGTTCTTTCTTCATCCTTTCTCCGTAGTTTCTGCC ATTCCAGTTCGCGTGAGACGCGTGGTGCCGCACGTCTGACCTCCCCTCTA ACCAAAAAATCGTATGGCTGCTCGTACGTCTGTTGTTAGAATCCTGAGTG TGTCGGGAAGTTTCTGGAGACGGCGGACGCGATCGCGCGAAGACCAAGGG CGACTACGACAGGCGGTGGTGACGATGACGGCAAGGAGGAAAGCGAATCC CGGGTAACACCCATGATGTTCATCACGAGTGAGTGCACCCTTCAAAGAAA ATGCATATGGTAGTCTATATGCCGAGTAGTTGGGCTGCCGCCGTTGGCCG CGTTCATCGCTTGCTAGTGACGTCATGAATGGTTCTAACGCCTGTTTTGA GGTTGACACCCCCCCCCCGTTTTTTCGGAACGCAGGTCCATTGAACCACG CATACTTGAGGGAGAACATGGGGCTGCGCAGGACGCCGTTCCAGCTGGCC TTCAAGAGCAAGTTTGCCACGCCCATGTCGCTCTACACCAACTACCCGAG CGACGCGTTGGGGGGATGGGTGGAAGAAGAGGACTAA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig7496:1767..5203+

>mRNA_L-elsbetiae_contig7496.16386.1 ID=mRNA_L-elsbetiae_contig7496.16386.1|Name=mRNA_L-elsbetiae_contig7496.16386.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1572bp|location=Sequence derived from alignment at L-elsbetiae_contig7496:1767..5203+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGCTCGCTCCCGGTCATCGAGCAGCAGCTCCAGCGATGGAGGCCCTCC
TGAAATCACGCTCGATTCTCTGTCGGCTGACACTTTGGCCGCACTCAACG
CGCACCTGGCCGTGAAAGACGCAGTGGAGATGGCTCGCTCCCGGTCATCG
AGCAGCAGCTCCAGCGATGGAGGCCCTCCTGAAATCACGCTCGATTCTCT
GTCGGCTGACACTTTGGCCGCACTCAACGCGCACCTGGCCGTGAAAGACG
CAGTGGAGGTGGAAGAGGGGGCTCCCGAGGGAGCTAAAGGCACGTTTGTA
ACGGAGGACTTCGGGCTGTCTCAGTTCTGGTGGAAGAGGGGGCTCCCGAG
GGAGCTAAAGGCACGTTTGTAACGGAGGACTTCGGGCTGTCTCAGTTCTG
GTACGACGATGATACTCAGCGGGCGATGGCCAGAGAAGTGCTGATAGAGG
CGGGAGGTGGAAGGGCGGCCATCATCAGCGCTCCGTCCGTGATGAACGGC
ATCAAGGTACGACGATGATACTCAGCGGGCGATGGCCAGAGAAGTGCTGA
TAGAGGCGGGAGGTGGAAGGGCGGCCATCATCAGCGCTCCGTCCGTGATG
AACGGCATCAAGTTGCTTAAATCGGACGGCTGGAGCTGCGGAACGCGGGG
CGGGGCAACGGTGTACATCTTCGAGTACGACCGGCGCTTCGACCAGGCGT
ATCCGGAATCCTTTGTTTGCTTAAATCGGACGGCTGGAGCTGCGGAACGC
GGGGCGGGGCAACGGTGTACATCTTCGAGTACGACCGGCGCTTCGACCAG
GCGTATCCGGAATCCTTTGTGTACTACGATTTTAACGAGCCTCTTGCGGT
TCCCGACGAGCTTCGAGGTTCGGTGGACTACATTCTCATGGACCCTCCCT
ACCTGGTACTACGATTTTAACGAGCCTCTTGCGGTTCCCGACGAGCTTCG
AGGTTCGGTGGACTACATTCTCATGGACCCTCCCTACCTGAATCCTGAGT
GTGTCGGGAAGTTTCTGGAGACGGCGGACGCGATCGCGCGAAGACCAAGG
GCGACTACGACAGGCGGTGGTGACGATGACGGCAAGGAGGAAAGCGAATC
CCGGGTAACACCCATGATGTTCATCACGAAATCCTGAGTGTGTCGGGAAG
TTTCTGGAGACGGCGGACGCGATCGCGCGAAGACCAAGGGCGACTACGAC
AGGCGGTGGTGACGATGACGGCAAGGAGGAAAGCGAATCCCGGGTAACAC
CCATGATGTTCATCACGAGTCCATTGAACCACGCATACTTGAGGGAGAAC
ATGGGGCTGCGCAGGACGCCGTTCCAGCTGGCCTTCAAGAGCAAGTTTGC
CACGCCCATGTCGCTCTACACCAACTACCCGAGCGACGCGTTGGGGGGAT
GGGTGGAAGAAGAGGACTAAGTCCATTGAACCACGCATACTTGAGGGAGA
ACATGGGGCTGCGCAGGACGCCGTTCCAGCTGGCCTTCAAGAGCAAGTTT
GCCACGCCCATGTCGCTCTACACCAACTACCCGAGCGACGCGTTGGGGGG
ATGGGTGGAAGAAGAGGACTAA
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