mRNA_L-elsbetiae_contig7491.16382.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig7491.16382.1 vs. uniprot
Match: D8LCK5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCK5_ECTSI) HSP 1 Score: 160 bits (404), Expect = 1.770e-46 Identity = 88/90 (97.78%), Postives = 89/90 (98.89%), Query Frame = 1 Query: 94 MARTTTRSGRREMNPTDAYRKLQRKKEVSKNKKERKKVREFSAMVRNPDLMVEEVQRMEVLDASGKLSENDVKRLANLRVTHRVLLKKKK 363 MARTTTRSGRREMNPTDAYRKLQRKKEV KNKKERKKVREFSAMVRNPDLMVEEVQRMEVLDA+GKLSENDVKRLANLRVTHRVLLKKKK Sbjct: 1 MARTTTRSGRREMNPTDAYRKLQRKKEVQKNKKERKKVREFSAMVRNPDLMVEEVQRMEVLDAAGKLSENDVKRLANLRVTHRVLLKKKK 90
BLAST of mRNA_L-elsbetiae_contig7491.16382.1 vs. uniprot
Match: A0A6H5JUT0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUT0_9PHAE) HSP 1 Score: 155 bits (392), Expect = 2.740e-42 Identity = 85/87 (97.70%), Postives = 86/87 (98.85%), Query Frame = 1 Query: 94 MARTTTRSGRREMNPTDAYRKLQRKKEVSKNKKERKKVREFSAMVRNPDLMVEEVQRMEVLDASGKLSENDVKRLANLRVTHRVLLK 354 MARTTTRSGRREMNPTDAYRKLQRKKEV KNKKERKKVREFSAMVRNPDLMVEEVQRMEVLDA+GKLSENDVKRLANLRVTHRVLLK Sbjct: 1 MARTTTRSGRREMNPTDAYRKLQRKKEVQKNKKERKKVREFSAMVRNPDLMVEEVQRMEVLDAAGKLSENDVKRLANLRVTHRVLLK 87
BLAST of mRNA_L-elsbetiae_contig7491.16382.1 vs. uniprot
Match: A0A4D9CTP8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CTP8_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 1.330e-12 Identity = 39/82 (47.56%), Postives = 60/82 (73.17%), Query Frame = 1 Query: 109 TRSGRREMNPTDAYRKLQRKKEVSKNKKERKKVREFSAMVRNPDLMVEEVQRMEVLDASGKLSENDVKRLANLRVTHRVLLK 354 T+SG+REMNP DAYRK QRKKE+ KNKK+RK+VRE + V++P+++ EE+ +M+ L A+G L V +L ++ + ++K Sbjct: 5 TKSGKREMNPADAYRKEQRKKEIKKNKKDRKRVRELGSYVKDPEVLKEEIDKMDKLSAAGTLDHKLVGKLEQMKHLYPAIVK 86
BLAST of mRNA_L-elsbetiae_contig7491.16382.1 vs. uniprot
Match: A0A3L6FQG0_MAIZE (Uncharacterized protein n=1 Tax=Zea mays TaxID=4577 RepID=A0A3L6FQG0_MAIZE) HSP 1 Score: 67.4 bits (163), Expect = 1.920e-11 Identity = 37/85 (43.53%), Postives = 58/85 (68.24%), Query Frame = 1 Query: 109 TRSGRREMNPTDAYRKLQRKKEVSKNKKERKKVREFSAMVRNPDLMVEEVQRMEVLDASGKLSENDVKRLANLRVTHRVLLKKKK 363 T G + MNPTDA+RK QRKKE+ +NKKERKKVRE + ++PD + E+++++E + A G L + + L T+ +++KK+K Sbjct: 3 TTKGGKAMNPTDAFRKEQRKKELKRNKKERKKVREVGILKKDPDAIREQIEKLEKMKADGALDKARKHKKRQLEDTYNLIVKKRK 87
BLAST of mRNA_L-elsbetiae_contig7491.16382.1 vs. uniprot
Match: B8B855_ORYSI (Uncharacterized protein n=1 Tax=Oryza sativa subsp. indica TaxID=39946 RepID=B8B855_ORYSI) HSP 1 Score: 67.0 bits (162), Expect = 2.470e-10 Identity = 36/85 (42.35%), Postives = 59/85 (69.41%), Query Frame = 1 Query: 109 TRSGRREMNPTDAYRKLQRKKEVSKNKKERKKVREFSAMVRNPDLMVEEVQRMEVLDASGKLSENDVKRLANLRVTHRVLLKKKK 363 T G + MNPTDA+RK QRKKE+ +NKKERKKVRE + ++P+ ++E+++++E + A G L + + L T+ +++KK+K Sbjct: 3 TTKGGKVMNPTDAFRKEQRKKELKRNKKERKKVREVGILKKDPEAILEQIEKLEKMKADGALDKARKHKKRQLEDTYNLIVKKRK 87
BLAST of mRNA_L-elsbetiae_contig7491.16382.1 vs. uniprot
Match: A0A2G9GBJ9_9LAMI (Uncharacterized protein n=1 Tax=Handroanthus impetiginosus TaxID=429701 RepID=A0A2G9GBJ9_9LAMI) HSP 1 Score: 64.7 bits (156), Expect = 3.270e-10 Identity = 39/91 (42.86%), Postives = 58/91 (63.74%), Query Frame = 1 Query: 94 MARTTTRSGRREMNPTDAYRKLQRKKEVSKNKKERKKVREFSAMVRNPDLMVEEVQRMEVLDASGKLSENDVKRLANLRVTHRVLLKKKKV 366 M +TT G + MNPTDAYRK RKKE+ +NKKERKKVRE + ++P+ E++ ++E + A G L + + L T +++KK+KV Sbjct: 1 MVKTT--KGGKTMNPTDAYRKELRKKELKRNKKERKKVREVGILKKDPETFKEQIHKLEAMKADGALDKARKHKKRQLEDTLNLVIKKRKV 89
BLAST of mRNA_L-elsbetiae_contig7491.16382.1 vs. uniprot
Match: A0A5J5BDX2_9ASTE (Uncharacterized protein n=1 Tax=Nyssa sinensis TaxID=561372 RepID=A0A5J5BDX2_9ASTE) HSP 1 Score: 66.6 bits (161), Expect = 3.670e-10 Identity = 38/85 (44.71%), Postives = 57/85 (67.06%), Query Frame = 1 Query: 109 TRSGRREMNPTDAYRKLQRKKEVSKNKKERKKVREFSAMVRNPDLMVEEVQRMEVLDASGKLSENDVKRLANLRVTHRVLLKKKK 363 T G + MNPTDAYRK RKKE+ +NKKERKKVRE + ++PD + E+++++E++ A G L + + L T ++LKK+K Sbjct: 3 TTKGGKVMNPTDAYRKELRKKELKRNKKERKKVREVGILKKDPDTLKEQIEKLEMMKADGALDKARKHKKRQLEDTLNLVLKKRK 87
BLAST of mRNA_L-elsbetiae_contig7491.16382.1 vs. uniprot
Match: A0A7C9DBI6_OPUST (Uncharacterized protein (Fragment) n=2 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9DBI6_OPUST) HSP 1 Score: 67.0 bits (162), Expect = 5.800e-10 Identity = 40/90 (44.44%), Postives = 61/90 (67.78%), Query Frame = 1 Query: 94 MARTTTRSGRREMNPTDAYRKLQRKKEVSKNKKERKKVREFSAMVRNPDLMVEEVQRMEVLDASGKLSENDVKRLANLRVTHRVLLKKKK 363 M +TT G + MNPTDAYRK RKKE+ +NKKERKKVRE + ++PD + +++Q++E++ A G L + + L T +++LKK+K Sbjct: 1 MVKTT--KGGKVMNPTDAYRKELRKKELKRNKKERKKVREVGLLKKDPDQIKDQIQKLEMMKAEGALDKARKHKKRQLEDTLKLVLKKRK 88
BLAST of mRNA_L-elsbetiae_contig7491.16382.1 vs. uniprot
Match: A0A6J1JWB7_CUCMA (WW domain-binding protein 11-like n=3 Tax=Cucurbita TaxID=3660 RepID=A0A6J1JWB7_CUCMA) HSP 1 Score: 68.2 bits (165), Expect = 5.920e-10 Identity = 39/85 (45.88%), Postives = 57/85 (67.06%), Query Frame = 1 Query: 109 TRSGRREMNPTDAYRKLQRKKEVSKNKKERKKVREFSAMVRNPDLMVEEVQRMEVLDASGKLSENDVKRLANLRVTHRVLLKKKK 363 T G + MNPTDAYRK RKKE+ +NKKERKKVRE + ++PD + E++Q++E++ A G L + + L T ++LKK+K Sbjct: 3 TTKGGKVMNPTDAYRKELRKKELKRNKKERKKVREVGILKKDPDTIKEQIQKLEIMKADGALDKARKHKKRQLEDTLNLVLKKRK 87
BLAST of mRNA_L-elsbetiae_contig7491.16382.1 vs. uniprot
Match: A0A0P0X3N8_ORYSJ (Os07g0192900 protein n=1 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=A0A0P0X3N8_ORYSJ) HSP 1 Score: 67.0 bits (162), Expect = 8.360e-10 Identity = 36/85 (42.35%), Postives = 59/85 (69.41%), Query Frame = 1 Query: 109 TRSGRREMNPTDAYRKLQRKKEVSKNKKERKKVREFSAMVRNPDLMVEEVQRMEVLDASGKLSENDVKRLANLRVTHRVLLKKKK 363 T G + MNPTDA+RK QRKKE+ +NKKERKKVRE + ++P+ ++E+++++E + A G L + + L T+ +++KK+K Sbjct: 3 TTKGGKVMNPTDAFRKEQRKKELKRNKKERKKVREVGILKKDPEAILEQIEKLEKMKADGALDKARKHKKRQLEDTYNLIVKKRK 87 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig7491.16382.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7491.16382.1 >prot_L-elsbetiae_contig7491.16382.1 ID=prot_L-elsbetiae_contig7491.16382.1|Name=mRNA_L-elsbetiae_contig7491.16382.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=167bp MARTTTRSGRREMNPTDAYRKLQRKKEVSKNKKERKKVREFSAMVRNPDLback to top mRNA from alignment at L-elsbetiae_contig7491:3201..9016- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig7491.16382.1 ID=mRNA_L-elsbetiae_contig7491.16382.1|Name=mRNA_L-elsbetiae_contig7491.16382.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5816bp|location=Sequence derived from alignment at L-elsbetiae_contig7491:3201..9016- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig7491:3201..9016- >mRNA_L-elsbetiae_contig7491.16382.1 ID=mRNA_L-elsbetiae_contig7491.16382.1|Name=mRNA_L-elsbetiae_contig7491.16382.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1002bp|location=Sequence derived from alignment at L-elsbetiae_contig7491:3201..9016- (Laminarionema elsbetiae ELsaHSoW15)back to top |