mRNA_L-elsbetiae_contig749.16380.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig749.16380.1
Unique NamemRNA_L-elsbetiae_contig749.16380.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig749.16380.1 vs. uniprot
Match: D8LJ58_ECTSI (ER membrane protein complex subunit 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ58_ECTSI)

HSP 1 Score: 426 bits (1095), Expect = 2.060e-149
Identity = 212/244 (86.89%), Postives = 228/244 (93.44%), Query Frame = 2 
Query:   29 MSFKKLPELCREASGGKLGALRNLLRFLRKEKVRRPDLCLEHGKQLLAFRSSLGDELWVIHEQMVTAALDSGDLATAHEHLEVLKAKFPGSQRVRRLEGMRCEAEGGFSAASKIYEEMLVANPANSLARKRQVAVLIAQADTAGAVKALNGYLAEFAADGEAWLQLAKLHISALSYEAAAFCYEELVLISPSDHVVHCRLGELYYTMGGAENLLRARKHFSQSVDLLKAGNARGLHGLCQACAS 760
            MS KKLPELCREASGGKL  LR+LLRFLRKEK+RRPDLCL++GKQLL +  SLGDELWVIHEQMVTAALDSGD+ TAHEHL+VL  KFPGSQRVRRLEGMRCEAEG F+AA+ IYEEM+ ANPANSLARKRQVAVLIA+ DTAGAVKALNGYLAEFAADGEAWLQLAKLHI AL+Y AAAFCYEELVL++PSDHVVHCRLGE+YYTMGGAENL+RARKHFSQSVDLLKAGNARGLHGLCQ CAS
Sbjct:    1 MSLKKLPELCREASGGKLSPLRDLLRFLRKEKIRRPDLCLQYGKQLLTYGRSLGDELWVIHEQMVTAALDSGDVPTAHEHLQVLTRKFPGSQRVRRLEGMRCEAEGSFAAAAAIYEEMVEANPANSLARKRQVAVLIAKGDTAGAVKALNGYLAEFAADGEAWLQLAKLHIGALNYAAAAFCYEELVLVAPSDHVVHCRLGEVYYTMGGAENLMRARKHFSQSVDLLKAGNARGLHGLCQTCAS 244
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BLAST of mRNA_L-elsbetiae_contig749.16380.1 vs. uniprot
Match: A0A6H5KPY1_9PHAE (ER membrane protein complex subunit 2 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPY1_9PHAE)

HSP 1 Score: 358 bits (919), Expect = 1.380e-122
Identity = 178/209 (85.17%), Postives = 194/209 (92.82%), Query Frame = 2 
Query:   29 MSFKKLPELCREASGGKLGALRNLLRFLRKEKVRRPDLCLEHGKQLLAFRSSLGDELWVIHEQMVTAALDSGDLATAHEHLEVLKAKFPGSQRVRRLEGMRCEAEGGFSAASKIYEEMLVANPANSLARKRQVAVLIAQADTAGAVKALNGYLAEFAADGEAWLQLAKLHISALSYEAAAFCYEELVLISPSDHVVHCRLGELYYTMGG 655
            MS KKLPELCREASGGKL  LR+LLRFLRKE++RRPDLCL++GKQLL +  SLGDELWVIHEQMVTAALDSGD+ TAHEHL+VL  KFPGSQRVRRLEGMRCEAEG F+AA+ IYEEM+ ANPANSLARKRQVAVLIA+ DTAGAVKALNGYLAEFAADGEAWLQLAKLHI AL+Y AAAFCYEELVL++PSDHVVHCRLGE+YYTMGG
Sbjct:    1 MSLKKLPELCREASGGKLSPLRDLLRFLRKERIRRPDLCLQYGKQLLTYGRSLGDELWVIHEQMVTAALDSGDVPTAHEHLQVLTRKFPGSQRVRRLEGMRCEAEGSFAAAAAIYEEMVEANPANSLARKRQVAVLIAKGDTAGAVKALNGYLAEFAADGEAWLQLAKLHIGALNYAAAAFCYEELVLVAPSDHVVHCRLGEVYYTMGG 209
[Close]
BLAST of mRNA_L-elsbetiae_contig749.16380.1 vs. uniprot
Match: A0A7S2GPJ3_9STRA (ER membrane protein complex subunit 2 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GPJ3_9STRA)

HSP 1 Score: 215 bits (547), Expect = 6.480e-66
Identity = 115/233 (49.36%), Postives = 160/233 (68.67%), Query Frame = 2 
Query:   59 REASGGKLGALRNLLRFLRKEKVRRPDLCLEHGKQLLA-FRSSLGDELWVIHEQMVTAALDSGDLATAHEHLEVLKAKFPGSQRVRRLEGMRCEAEGGFSAASKIYEEMLVANPANSLARKRQVAVLIAQADTAGAVKALNGYLAEFAADGEAWLQLAKLHISALSYEAAAFCYEELVLISPSDHVVHCRLGELYYTMGGAENLLRARKHFSQSVDLLKAGNARGLHGLCQAC 754
            R A  G+   + NL +FLR  K+R+    +  G+ +L  +RS +GDELW + EQ++ AALD  D   + E L+ L+ KFP S RV+RLEGM+ EA G + AA +IY++ML  NPAN+LA KRQV VL AQ +   A++ LN YL+ F AD  AW +L +++++   YEAA FCYEEL+L +P++H+ HCRLGELYYT+G  ++L  ARK+F+QS+DL K GN R +HGL   C
Sbjct:    2 RAAETGRPAPILNLFKFLRINKLRQTRDVVRWGRVVLEKYRSHMGDELWTVLEQVMIAALDLHDTELSKECLKELQTKFPESARVKRLEGMQSEALGEWGAAKEIYKQMLEENPANTLAMKRQVCVLKAQGNYPQAIRQLNEYLSTFGADTSAWQELGEMYMAISKYEAAVFCYEELILSNPTNHIHHCRLGELYYTLG-PKHLRTARKYFAQSLDLKKDGNLRAMHGLASCC 233
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BLAST of mRNA_L-elsbetiae_contig749.16380.1 vs. uniprot
Match: A0A7S2CCR7_9STRA (ER membrane protein complex subunit 2 n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CCR7_9STRA)

HSP 1 Score: 213 bits (541), Expect = 9.490e-65
Identity = 113/240 (47.08%), Postives = 159/240 (66.25%), Query Frame = 2 
Query:   35 FKKLPELCREASGGKLGALRNLLRFLRKEKVRRPDLCLEHGKQLLAFRSSLGDELWVIHEQMVTAALDSGDLATAHEHLEVLKAKFPGSQRVRRLEGMRCEAEGGFSAASKIYEEMLVANPANSLARKRQVAVLIAQADTAGAVKALNGYLAEFAADGEAWLQLAKLHISALSYEAAAFCYEELVLISPSDHVVHCRLGELYYTMGGAENLLRARKHFSQSVDLLKAGNARGLHGLCQAC 754
            F++L  +  E S   + A + LL+ +R  K+R  ++ + HG +L+  +++LGDE W + EQ+  AALD  + + A   L+ L  +FP S RV+RL G+  EA G ++ A +IY+ ML  NPAN L  KRQV VL AQ     A+K LN YL +F AD  AW +LA L++S   YEAAAFCYEELVL +P+ H+ HCRLGE+YYT+GG +++ +ARK+F+QS++L K  NAR LHGL   C
Sbjct:    9 FEEL-RVAAERSPRSVPAAQALLKHIRMAKMRESEMVVRHGSKLVERQAALGDEYWSVLEQVFLAALDVDERSLAQTCLQALNEQFPESTRVKRLVGISREAMGKYAEAEEIYKGMLEENPANQLVLKRQVCVLKAQNKIPAAIKCLNNYLKQFQADANAWQELADLYLSVSKYEAAAFCYEELVLANPTSHINHCRLGEIYYTLGG-KHIAKARKYFAQSLELKKTNNARALHGLAACC 246
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BLAST of mRNA_L-elsbetiae_contig749.16380.1 vs. uniprot
Match: A0A7S2S8F2_9STRA (ER membrane protein complex subunit 2 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S8F2_9STRA)

HSP 1 Score: 204 bits (518), Expect = 3.580e-61
Identity = 108/235 (45.96%), Postives = 153/235 (65.11%), Query Frame = 2 
Query:   62 EASGGKLGALRNLLRFLRKEKVRRPDLCLEHGKQLL--AFRSSLGDELWVIHEQMVTAALDSGDLATAHEHLEVLKAKFPGSQRVRRLEGMRCEAEGGFSAASKIYEEMLVANPANSLARKRQVAVLIAQADTAGAVKALNGYLAEFAADGEAWLQLAKLHISALSYEAAAFCYEELVLISPSDHVVHCRLGELYYTMGGAENLLRARKHFSQSVDLLKAGNARGLHGLCQACAS 760
            +  G    A+  LL+++R  K+R   L +++GK L+     S+LGDE W + EQ+  AALD+ D+  A   L  L  +FP S RV+RL GM+ EAE  ++AA +IY+E+L ANPAN LA KR++ +L A      A+  LN Y+  F AD  AW +LA L++S   Y++AAFCYEEL+L +P  H++HCRLGE+YYT+G  ENL  ARKHF +S++L +  N R LHGL   C++
Sbjct:   17 KTKGRSTAAVTALLKYIRTHKLRESKLVVQYGKPLVQGGGGSALGDEKWTVLEQVFIAALDTKDMDLADACLRGLHTQFPDSARVKRLVGMKSEAERDYTAALQIYDELLEANPANQLAMKRKICILRADNKVQSAIHELNEYIKRFQADASAWQELADLYLSVAKYDSAAFCYEELILHNPMSHLLHCRLGEIYYTLG-KENLTVARKHFCKSLELKRKDNPRALHGLRSCCSA 250
[Close]
BLAST of mRNA_L-elsbetiae_contig749.16380.1 vs. uniprot
Match: A0A067CNU6_SAPPC (ER membrane protein complex subunit 2 n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CNU6_SAPPC)

HSP 1 Score: 193 bits (491), Expect = 2.590e-57
Identity = 107/215 (49.77%), Postives = 144/215 (66.98%), Query Frame = 2 
Query:   98 LLRFLRKEKVRRPDLCLEHGKQLLAFRSSLGDELWVIHEQMVTAALDSGDLATAHEHLEVLKAKFPGSQRVRRLEGMRCEAEGGFSAASKIYEEMLVANPANSLARKRQVAVLIAQADTAGAVKALNGYLAEFAADGEAWLQLAKLHISALSYEAAAFCYEELVLISPSDHVVHCRLGELYYTMGGAENLLRARKHFSQSVDLLKAGNARGLHGL 742
            LL F+RKEK+R PD+ ++ G+ L+A R  LGD LW IHEQ++ AALD G +         LK KFP S RV RLEGM  EA+G ++ A  +Y+++L  NPAN L  KRQV++L AQ  T  A+  LN  L  F  D  AW +L++L++S  +Y+ AAFCYEEL+L++P D + H RL ELY T+GG +NL  ARKHF+ ++DL  A + RGL GL
Sbjct:   22 LLEFVRKEKLRVPDVVVKVGQALVA-RGGLGDALWTIHEQVLIAALDLGAMDVVDSTFLALKNKFPDSSRVLRLEGMIFEAQGKYAQADALYKDILAKNPANMLVMKRQVSLLRAQGRTEDAITKLNALLRCFQTDAGAWCELSELYLSLGNYKHAAFCYEELILLNPLDALNHTRLAELYVTIGGLDNLRTARKHFAHALDL-NAQSTRGLVGL 234
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BLAST of mRNA_L-elsbetiae_contig749.16380.1 vs. uniprot
Match: A0A3M6V6N0_9STRA (ER membrane protein complex subunit 2 n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6V6N0_9STRA)

HSP 1 Score: 191 bits (485), Expect = 2.980e-56
Identity = 104/216 (48.15%), Postives = 139/216 (64.35%), Query Frame = 2 
Query:   98 LLRFLRKEKVRRPDLCLEHGKQLLAFRS-SLGDELWVIHEQMVTAALDSGDLATAHEHLEVLKAKFPGSQRVRRLEGMRCEAEGGFSAASKIYEEMLVANPANSLARKRQVAVLIAQADTAGAVKALNGYLAEFAADGEAWLQLAKLHISALSYEAAAFCYEELVLISPSDHVVHCRLGELYYTMGGAENLLRARKHFSQSVDLLKAGNARGLHGL 742
            LL ++RKEK+R P      GK L+   S  LGDELW ++EQ   AALD  D   +   L+ L+ KFPGS RV RLEGM+ E    F+ A  +Y+E+L ANPAN+L  KR++AVL AQ  TA  V ALN +L  F  D  AW +L + ++S  +Y  AAFCYEELVL++P D + H RL ++Y T+GG +NLL+ARKH++ S++L K  N R    L
Sbjct:   25 LLHYVRKEKLREPHAVASIGKLLVTKHSWGLGDELWTVYEQTFIAALDLHDDELSETCLKALQTKFPGSSRVARLEGMQLEQRREFTKALALYDELLEANPANALVFKRKIAVLKAQRKTADVVTALNEFLRSFGTDQTAWTELGETYLSIGTYRYAAFCYEELVLLNPMDAISHSRLADIYATIGGLDNLLKARKHYAHSLELNKKQNLRACFAL 240
[Close]
BLAST of mRNA_L-elsbetiae_contig749.16380.1 vs. uniprot
Match: D0NVY1_PHYIT (ER membrane protein complex subunit 2 n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NVY1_PHYIT)

HSP 1 Score: 190 bits (483), Expect = 4.490e-56
Identity = 105/216 (48.61%), Postives = 138/216 (63.89%), Query Frame = 2 
Query:   98 LLRFLRKEKVRRPDLCLEHGKQLLAFRS-SLGDELWVIHEQMVTAALDSGDLATAHEHLEVLKAKFPGSQRVRRLEGMRCEAEGGFSAASKIYEEMLVANPANSLARKRQVAVLIAQADTAGAVKALNGYLAEFAADGEAWLQLAKLHISALSYEAAAFCYEELVLISPSDHVVHCRLGELYYTMGGAENLLRARKHFSQSVDLLKAGNARGLHGL 742
            LL ++RKEK+R        GK L+   S  +GDELW I+EQ   AALD  D   A   L+ L+ KFPGS RV RLEGM+ E  G F+ A  +Y E+L ANPAN+L  KR++AVL AQ   A  + ALN +L  F  D  AW +L + ++S  +Y  AAFCYEELVL++P D + H RLG++Y T+GG ENLL+ARKH++ S++L K  N R    L
Sbjct:   25 LLHYVRKEKLRESQAVATIGKLLVTKHSWGVGDELWSIYEQTFIAALDLHDDELAETCLKALQTKFPGSSRVARLEGMQLEQSGEFAKALALYAELLEANPANALVLKRKIAVLKAQKKAADVIIALNEFLRSFGTDQAAWTELGETYLSMGAYRYAAFCYEELVLLNPMDAISHSRLGDVYSTIGGLENLLKARKHYAHSIELNKKQNLRASFSL 240
[Close]
BLAST of mRNA_L-elsbetiae_contig749.16380.1 vs. uniprot
Match: A0A0N7L4P2_PLAHL (ER membrane protein complex subunit 2 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L4P2_PLAHL)

HSP 1 Score: 188 bits (478), Expect = 2.390e-55
Identity = 102/217 (47.00%), Postives = 138/217 (63.59%), Query Frame = 2 
Query:   95 NLLRFLRKEKVRRPDLCLEHGKQLLA-FRSSLGDELWVIHEQMVTAALDSGDLATAHEHLEVLKAKFPGSQRVRRLEGMRCEAEGGFSAASKIYEEMLVANPANSLARKRQVAVLIAQADTAGAVKALNGYLAEFAADGEAWLQLAKLHISALSYEAAAFCYEELVLISPSDHVVHCRLGELYYTMGGAENLLRARKHFSQSVDLLKAGNARGLHGL 742
            +LL ++RKEK+R+P +    GK L+A     LGDELW ++EQ   AALD  D   A   L+ L+ KFPGS RV RLEGM+ E  G F+ A  +Y E+L ANPAN+L  KR++A+  AQ  T   + ALN +L  F  D  AW +L + ++S  +Y  AAFCYEELVL++P D + H RL ++Y T+GG E LL ARKH++ S++L K  N R    L
Sbjct:   22 DLLYYIRKEKLRKPQVVASIGKLLVAEHHRGLGDELWNVYEQTFIAALDLHDDELATTCLQALQTKFPGSSRVARLEGMQLEQRGEFAKALALYAELLEANPANALVLKRKIAIYKAQKKTTDVIMALNEFLRSFGTDLAAWTELGETYLSLGAYRYAAFCYEELVLLNPMDAIAHSRLADIYSTIGGLEYLLTARKHYAHSIELNKKQNLRAFLAL 238
[Close]
BLAST of mRNA_L-elsbetiae_contig749.16380.1 vs. uniprot
Match: UPI0014557848 (ER membrane protein complex subunit 2-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI0014557848)

HSP 1 Score: 187 bits (475), Expect = 5.690e-55
Identity = 100/217 (46.08%), Postives = 143/217 (65.90%), Query Frame = 2 
Query:   92 RNLLRFLRKEKVRRPDLCLEHGKQLLAFRSSLGDELWVIHEQMVTAALDSGDLATAHEHLEVLKAKFPGSQRVRRLEGMRCEAEGGFSAASKIYEEMLVANPANSLARKRQVAVLIAQADTAGAVKALNGYLAEFAADGEAWLQLAKLHISALSYEAAAFCYEELVLISPSDHVVHCRLGELYYTMGGAENLLRARKHFSQSVDLLKAGNARGLHGL 742
            R  L+  R+E  R+    LE G+ +L     LGDE+W ++EQ+  AALD GD+  A   +E LK KFP S+RV+RL+GM+ EA+G F  A  +Y+E+L  +P+N++ RKR VA+L AQ     A+K LN YL  F AD EAWL+L+ L+I   +Y  AAFC+EEL++ +P +H+ H R  E+ YT GG E++  ARK+F+Q+V L  + N R L+GL
Sbjct:   11 REQLKKWREENARQSAETLELGEYVLLNHKKLGDEVWAVYEQVCIAALDVGDIEEAVGCIEALKTKFPQSKRVKRLQGMKLEAQGRFEDAKLVYDELLKEDPSNAMIRKRLVAILKAQDRIGDAIKELNRYLESFMADHEAWLELSDLYIQEQNYGKAAFCFEELIMSNPHNHLYHQRYAEIRYTQGGVESMEIARKYFAQAVKL-NSNNIRALYGL 226
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig749.16380.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJ58_ECTSI2.060e-14986.89ER membrane protein complex subunit 2 n=1 Tax=Ecto... [more]
A0A6H5KPY1_9PHAE1.380e-12285.17ER membrane protein complex subunit 2 n=1 Tax=Ecto... [more]
A0A7S2GPJ3_9STRA6.480e-6649.36ER membrane protein complex subunit 2 n=1 Tax=Dict... [more]
A0A7S2CCR7_9STRA9.490e-6547.08ER membrane protein complex subunit 2 n=1 Tax=Flor... [more]
A0A7S2S8F2_9STRA3.580e-6145.96ER membrane protein complex subunit 2 n=1 Tax=Rhiz... [more]
A0A067CNU6_SAPPC2.590e-5749.77ER membrane protein complex subunit 2 n=2 Tax=Sapr... [more]
A0A3M6V6N0_9STRA2.980e-5648.15ER membrane protein complex subunit 2 n=1 Tax=Pero... [more]
D0NVY1_PHYIT4.490e-5648.61ER membrane protein complex subunit 2 n=2 Tax=Phyt... [more]
A0A0N7L4P2_PLAHL2.390e-5547.00ER membrane protein complex subunit 2 n=1 Tax=Plas... [more]
UPI00145578485.690e-5546.08ER membrane protein complex subunit 2-like n=1 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig749contigL-elsbetiae_contig749:20596..27360 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score427.6
Seed ortholog evalue4e-117
Seed eggNOG ortholog2880.D8LJ58
Preferred nameEMC2
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005789,GO:0006457,GO:0008150,GO:0009987,GO:0012505,GO:0016020,GO:0016021,GO:0016043,GO:0022406,GO:0030176,GO:0031224,GO:0031227,GO:0031984,GO:0032991,GO:0034975,GO:0042175,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0051179,GO:0051640,GO:0051641,GO:0071840,GO:0072546,GO:0098796,GO:0098827,GO:0140056,GO:1990456
EggNOG free text desc.protein folding in endoplasmic reticulum
EggNOG OGsKOG3060@1,KOG3060@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionTetratricopeptide-like helical domain
Ec32 orthologEc-02_004860.1
Exons6
Model size760
Cds size732
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816832.5978444-CDS-L-elsbetiae_contig749:20595..207021622816832.5978444-CDS-L-elsbetiae_contig749:20595..20702Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig749 20596..20702 -
1691683847.4548495-CDS-L-elsbetiae_contig749:20595..207021691683847.4548495-CDS-L-elsbetiae_contig749:20595..20702Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig749 20596..20702 -
1622816832.6105263-CDS-L-elsbetiae_contig749:21471..215651622816832.6105263-CDS-L-elsbetiae_contig749:21471..21565Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig749 21472..21565 -
1691683847.4688952-CDS-L-elsbetiae_contig749:21471..215651691683847.4688952-CDS-L-elsbetiae_contig749:21471..21565Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig749 21472..21565 -
1622816832.621049-CDS-L-elsbetiae_contig749:22505..226401622816832.621049-CDS-L-elsbetiae_contig749:22505..22640Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig749 22506..22640 -
1691683847.4790244-CDS-L-elsbetiae_contig749:22505..226401691683847.4790244-CDS-L-elsbetiae_contig749:22505..22640Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig749 22506..22640 -
1622816832.631782-CDS-L-elsbetiae_contig749:23974..241811622816832.631782-CDS-L-elsbetiae_contig749:23974..24181Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig749 23975..24181 -
1691683847.4878736-CDS-L-elsbetiae_contig749:23974..241811691683847.4878736-CDS-L-elsbetiae_contig749:23974..24181Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig749 23975..24181 -
1622816832.6419277-CDS-L-elsbetiae_contig749:25766..258591622816832.6419277-CDS-L-elsbetiae_contig749:25766..25859Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig749 25767..25859 -
1691683847.4988768-CDS-L-elsbetiae_contig749:25766..258591691683847.4988768-CDS-L-elsbetiae_contig749:25766..25859Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig749 25767..25859 -
1622816832.652364-CDS-L-elsbetiae_contig749:27236..273321622816832.652364-CDS-L-elsbetiae_contig749:27236..27332Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig749 27237..27332 -
1691683847.5079544-CDS-L-elsbetiae_contig749:27236..273321691683847.5079544-CDS-L-elsbetiae_contig749:27236..27332Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig749 27237..27332 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816832.6664596-UTR-L-elsbetiae_contig749:27332..273601622816832.6664596-UTR-L-elsbetiae_contig749:27332..27360Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig749 27333..27360 -
1691683847.516665-UTR-L-elsbetiae_contig749:27332..273601691683847.516665-UTR-L-elsbetiae_contig749:27332..27360Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig749 27333..27360 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig749.16380.1prot_L-elsbetiae_contig749.16380.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig749 20596..27332 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig749.16380.1

>prot_L-elsbetiae_contig749.16380.1 ID=prot_L-elsbetiae_contig749.16380.1|Name=mRNA_L-elsbetiae_contig749.16380.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=244bp
MSFKKLPELCREASGGKLGALRNLLRFLRKEKVRRPDLCLEHGKQLLAFR
SSLGDELWVIHEQMVTAALDSGDLATAHEHLEVLKAKFPGSQRVRRLEGM
RCEAEGGFSAASKIYEEMLVANPANSLARKRQVAVLIAQADTAGAVKALN
GYLAEFAADGEAWLQLAKLHISALSYEAAAFCYEELVLISPSDHVVHCRL
GELYYTMGGAENLLRARKHFSQSVDLLKAGNARGLHGLCQACAS
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mRNA from alignment at L-elsbetiae_contig749:20596..27360-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig749.16380.1 ID=mRNA_L-elsbetiae_contig749.16380.1|Name=mRNA_L-elsbetiae_contig749.16380.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6765bp|location=Sequence derived from alignment at L-elsbetiae_contig749:20596..27360- (Laminarionema elsbetiae ELsaHSoW15)
CCTGGGAGAGAAAGAAGACATTCTTGACATGTCCTTCAAAAAGCTACCGG
AGTTGTGCAGAGAAGCGTCAGGAGGCAAGCTCGGGGCGTTGCGCAACCTT
CTGCGGTTCTTGCGGAAAGAGAAGGTACGTTCGTCCATGCTCTGATGTGC
TGCTCCATGGCTACAAGTACCTATAGCGAGAGGGGGCAGCTTGCCGATTC
AAGATGCGTGCAAGGGACAATATAATGCAACGAAGGGATGAAGACCGATG
CAAAGGTCAAGCTGCGTCTACGTTGTTTTCTCGTCGTTCCGTACGGCTCG
GTGGTGTGTCTGGGTGAGATATCTATACACTACACACCCGGCTCTCGAAC
TACTGCTGTAGTGGAGACAACAGCGGTACTACAATACATACACAGAATTT
CCCATTGTGCTGGTGATGCGCTCTGGATTGAGGGTGTTGGGGTGAGGGTT
GTCGCAAACCACGGCCTGCAATAGATACACCGGATGGATCTCCGCGGGAA
CAACTCGGAGGCGAGATATTTTAAGCAGGAGAGAGAAGAGCACCTGGTTC
GCACGGGTCGTTGTGAGCCCCGACCGCATCCATTGGCTGAAAACTACGAT
ACCTGTGGCAGTTCCTTACTTCGTCATACATTGGAGTTTCACGTGGGTGC
AGCTGCTCCTCGACCTAAAGTAGACACACCCCAAAATCCCCCCACCCTCT
CGGGGGCACAATCCTCCTCTGGGTCGTACCGCACACCCTGGCCAGCGGCT
GACGACGACACGTGGCGTTGGGAAAACGCGTGGACAGATGTGAAGCTACG
TTGTGCATACGTTCGCTGTAGATAGTAGCCGGAGTCTTGGTGCTGCTGCT
GTCGCCAGACGTTCGGGCCTGCGGTTTAGTCGCCGGACGTCGTTTCACCA
GCTCACGCGCAGCTATGTATGTTGCGTATTCTTCTCGTCTCTCCGACACT
CGCCATGCACCCCCTCTCGATGAGCCTCCAATCTTGGAAACAACACTTCC
ACCCGGCCACGAAAGCCATAGGACGCTGTTGTAAAATGTATGGCAACGCG
CGGCAGGCTATTTGCCGGTCGAGTTTCACTTTCAAGAGGCACCAGCCCTC
TTGCCTCCTTCTTAGTGTATGTAAGCAGCTATGTATCCACTCCGACTCAG
TTTCCCCCGCCAAGTGTAGGCGTATTTTGCCCTCAGGGTGCGATACTCGG
AAGCAGCGGGCTGCGCAAGCTCTCTCGGCGCTCATTTCCGGGCTCTGCTC
GCGCACCAGTCGCAGCGGGCGACCTGGCCCAACATCCTCTTGAGCCTCAT
GTCGTCCCTTTGGAGCTTGACTTTTGCATAGCTCCGAGGTTCCGAAGTTA
ACACACACACACAAAACACACACACACACACACTGGCCTCTAAATAGTTT
TCTGGTCTATCTAGCAGGAGGGTGCCAAAACAGAACGACTCGTTGCCGCC
GCCTTTCTGTGCTTCGCACGCACGGGTACATGGCCCCCCATCGCATCGCA
GGTACGGCGCCCCGACCTCTGCCTCGAGCATGGGAAGCAGCTGCTCGCTT
TCAGGAGTAGCCTGGGAGATGAGCTCTGGGTCATCCACGAGCAGGTGAGA
GGCAAAACGGTAGAGGCAGATACCGTAACTGTGCGGGCTTTTCACGGCAG
GTTATCCTGTGACCACGGGTATCGACCGCGTCAGTGCTGGATTAGTACGC
ACTCATGGAGGTGTACTGGGTATTGTAGAGAGATCGGAACCGTCTTTAAT
GTGAAGACAACACGCACATCGCACACCCCCTGGACCGATTTTCAAAGCTC
GGTTACTCCACAGCAAGAAAAATAATGTCGGTGCCGAAAAGGGTAGCGTT
GGAAATATCTCGTCGATATGTAGCTGTTCGAAAACGTGCCGTCTGGTGTT
GGCACCCACCCCTCTTCGTGACGAAATAACCGAACTTTAAGATTGGGTCC
AAGCGGGTGTGCGATAGCCCGCACAATTACGGTAGACCGACGGAATTGAT
GCACTTGCGAGTTTCTCGAGCCTAATTGTTTTAGATAATGGTGGTTGTTG
TCCATCGCTCTTCTTTCTTCCAAGCGATTGTTGGCGTGATTGTGAGTTCA
GCCCACCCTGTATTGAAGGAGTATTTAGTGCCCGAAGCGACTGGCTGGCC
GGCTGTGGCAAAAGACCATTGGCTCATGATGGTACAGGCAACAGTAGTGG
TAGACCAAAAGCAGTAGCCTTCGCAAGTTTTACTGGGGATAAAATCATTT
GGGATAAAGTATGGAAACGGCTAATGGGGGGTCGGTTTGGGGCTAGGGTT
AGGGTTAGGGTTACGGAACCCTTGTCTATTATTTCCTTATATATATAGAA
GTATAGACAGGAATTATTCGCGAAGGCGATCCGCCAAAAGTCTTCCCCTT
GTGGCACTGCCGCATCCCACCCACTGCTATATATCTCGTCGGGCTGATCT
CTTGCCATTGGGTTCTACCTCTGTGGTGTGGCGTGACGCCGCCCCTCCTG
CTGTCATTGTGACAAGCGGTGACTTGTCTTGGTTCTTGCAGGTGTTTGGC
CCTTTGAAGCACGAAAGAGTGCACGCCTCTTTCAGAAATCAGAGTAGTCT
AATTTCAAGTTTATATTGAAACACTACATAGATACATGAGTTACTTCCGA
ACGGGCTAATGCCAAGTTGTTGCGAAAAGCGTGAGATCCCCCCGGAGGGC
CCATCGGGTTTTGGAGGCAATGTAGTAATCGTTTCCTAGTCTCTCCACTC
CCTTTTTTGACACAACGGTGTGTTTCTAACTCTGAAAAACCGATGGAATT
CCCCGTGTTTCGTGGGACAATTGTTTTAGCCTTAATCGTGTAAAGAGTTG
GGAGTTGCCCACCCGTGCAGGCGTGTAAATTCACCGGGGGTGTTTCAAGT
TGGAAAGCAAGCGTGTGAGACGACAACATGTTGAACGACAACAAGCACCA
AACAAGTACCTAAATATATTTTGTTTTATTTTTCTTCCACGGCGTCGAGT
GTGCCCTTGTTTTGTGACCAAGGGGCCCCCAAGGATGTGTGTTTGGGCTA
TTTAGAGAGCTAATGTGTATGGAAATCAATAACAACAGCAACCTAAATAC
AACGACACACAGCATCCAACATTCCGAAGTACGTATGTACGTATGATGAC
ACGAAAACCACGAAAATGCGATGGCGCAGATGGTAACGGCCGCATTAGAT
TCGGGCGACCTCGCCACCGCCCACGAGCACCTGGAGGTGTTGAAGGCGAA
GTTTCCGGGCAGCCAGCGCGTGCGACGCCTGGAGGGCATGCGGTGCGAAG
CAGAGGGGGGCTTTTCGGCCGCGTCTAAGATCTACGAGGAGATGCTTGTG
GCGAACCCGGCCAACTCACTCGCCCGCAAGCGACAGGTGTGTGTGTGTGT
GTGTGTGAGTTTATGTTGTTTTATACTCCTCATCAGCCGTGCAGACGGTC
TTCAAAAAAAGCACCTCTGTAGGTTCGAGTTATGTTGTTTTATACTCCGC
ATCAACCGCGCAAGACGGTCTACCAAAAGAAACACACCTCTGTCGGTTCG
AGTTATATTGTTTTATGCCATACTCCTCATTAACTGTGCAAGACGGTCTA
CCAAGAACAAGAAAACACTATTGTCGGTTCGAGTTATGTTGTGTTATACT
CCGCATCAACCGTGCAAGACGGACGGTCTACAAGAAATTTCACTCTTGTC
GGTTCGAGTTATGTTGTTTAATACTCCGCATCAACCGTGCAAGACTGTCT
ACAACCAAGAAAAACAATTATGTCGGTCCGTCTGTCGTGCCTGTCACTGA
GCGTTTTGAATCCATATACTACATACGAAGTACGTGGCGTTACCATTTGG
CGTATTCCGCGCTGAGCATATAGATTTAAGTTTAACCGGGTGATCGATTT
TACAGCACGCCAGATTGCGTGTTGTCAGCGGCCCGAAAAGAAGGTGAGTG
GTGGCCCTCCCCTTCCCATGCTTGAGACGACTCCGCGCAGCCAAGTTTTC
CGCAATTTTAGCGAGTCTGTCGCCCGAGGACGTCGGGGATGCGTGGCGCA
ACTTTGCCGCGAGCCGTTTTTCACCGCTCACGCTTGTTTTCGCTGAAGAG
AGATCGAGCTGGTTTGGTTCCGTTTTTGATTATTTCGTCGGGGTTGTAGT
TTGATGCCAGCGCGGAGGGCATAAAAGCAAAAAAGGCGCAGGCAGTCTCA
CCTCTCGACGCGACTCTCTTAAGGGTTGGTGCGATTAGGGGGGGGGATAA
ACAGGAACAAGAAACAGCCGTGTGGGTGAGACGCAGGCAGCTCTTGTTGC
TTGTGCGCGAGAGTGCCGTCTCCGTGCCGGCCCTCTCGGGGTCTTGTTTC
AGCCTTAAAAGTTATGTCTGCACGAACAGCAGTAGTTTTCTTCTCTTGTC
TACTCTTCACTGCCCTCTGTGTTGTCTTCACATTAAAAACCGTTCCGATC
TCTGTATCCAGTAGACCTCCACGAGTCCGTACTAATCCAACACTGACGCG
GTCGATTCCATTCCCGTGGTTTCAGGATAACCTACCTTACCCTACAAAAA
ATAAACATAAAACTCGCTCCTCGAAAAACAGAACAACAGCAACAACAACA
ACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAGCAAC
AGCAACCACAACCACAACCACAACCACAATCACAACACAACAACAGCAAC
AAACACGGCGCACACAACAGGTGGCGGTGCTGATCGCTCAGGCGGACACG
GCGGGGGCGGTGAAGGCTCTGAACGGCTACCTGGCAGAGTTCGCGGCGGA
TGGGGAGGCGTGGCTGCAGCTCGCCAAGCTGCACATCAGCGCCCTCAGCT
ACGAGGTGCGCGGACGAAGGCACCCCGCGCCCCGGTTGAGATGGTTGATG
ATCATGCTGCTGGTGTTGGGATTGTGGTGTTGGGGGTTGTGGTGTGGTGG
GTTTTCTATACCCATATGAACATATCTGCAATCCAGTGTGTACTTTCCTC
GCTGTTATGGTGGTATTGGGGATTGTGGTTGTTTGGTGCGGTGGGTTTTC
TCTACCCGTATCTGCGATCCAGCACTTTCTTCGCTGTTATGGTGGTGTTG
GGGGATTGTAGTGGTGTGGTGCGGTTGATTTTCTCTACCCCTGTCCGCGA
TCCAGTACTTTCCTCGCTGTTATGGTGGTGCGGTGCGGTGGGTTTTCTCT
ACCCCTGTCAGTATTCATATTTAGTTGGTGTCGAAGAGCAAGGTGTGGCG
ACACCGGTGTGGGGATTTACGGTTGGGTCGCGTCTGATGCCGTTGGAGTG
AGCGTGTGGAGATCGTACTCTGGGCTGCAGAGCAGCTGCGCACCAGGGCC
CGATGCAGTATCTGTGCTAGGTGTAGGAGGAGACTTGATCGGAAGGAAGC
CTTCGCGCGCAGGCTGTGGATCGCGATAAAAAAGGTTTTTAATTTGGGTT
GGTTGGGCGACCAAAAAAAGAGACCCCGGAAATGCAGAAAAGGGAAGCAC
CTGTCAGTCGCTTCGAGAAGCATGCGGGGGGGCCGCGGTGGCCCCGCGGT
GTGGGCGTGCGGATGGGGCGCTTCTTTTGGGGTAGGCGTAAGGGATGGAT
CGTGAACTGGGTTCTACGAGGTGTGTACGCAGGCGGGCAGCAAAATATTG
AGCCTGTGTAGATCTCATAAATAGTTTTCCGACAGCAGAACAGCAGTCTG
TGATAGCCAGAAGGCAACCCTCACCCCGCAACCGTTTCACTTCACGCGTA
ACCAACCAACCCTGCCCCCCAACTCTGGCTCGGGGTTTTCCGCAGGCGGC
GGCGTTTTGCTACGAGGAGCTGGTGTTGATTTCTCCTTCGGACCATGTGG
TGCACTGTCGCCTAGGGGAGCTGTACTACACCATGGGGGGTGAGTGGACA
GATTGCTGTTGCTGCTACATTGATGTGATGACTAACCTGACCTCGGACCG
GGAGACTGAGGGCGGGGTCGAGGGGAGTAGGAACCGTCGTCCCGGATCAG
AGGAGTCTCGTTAGGCAGAGGGCGCAGGACGCAACTGCTGCGCGAAGATC
ACACAGGCCAACCCACCACACACGCACAAAAGACTGAACAGCAATCAATG
AGCGAGACGGCGTTGGGGGGTTGGCCCGGCCGCAAACCGAATGGAATGGT
TGCTCTTCAATCAAGAAACGGCCACATACGTACCTCCTCTAGTCTTCGCA
GGGTTTGTCTAAAAATCTCTCAACATGTGAGATAAAAGTTTAGGAATCGG
GAAAGGGGGGTCGGGGGTTGGGGTTACATAGGGTTACGGTGACGGTTAGG
GTACGGAATCCCTGTCTCTATTTCCCACACATGTTAAAGTTAATCATTTC
GCGAAGACGGTCGTGGACGGGCTTCTTGTTTCGCTCCCCGAGTCGTGGGC
GTGGGTGTTGATTTGTTGATTGTCGATTTTACTTCCGCTTGATTCTCTTT
GATTGCTGTGTTCTGCGTCATCATGCTTGGAATACGAAAGTGTAAATACA
TACTTCTATATATCTACATGGTGTGTTTTTGTCTCCTCTTCTCTCTCTTT
TTTGTTTGTATCCCCCTCCTCCGAACCCTTCGATGCAACCAATCCATAAT
ACACATGGTAATACGATGTCATCCTCGAACCAACCTTTTCTTTTTGTAAT
GCTTGCAGGTGCGGAGAACCTTTTGCGCGCGCGAAAACACTTCTCCCAGT
CGGTCGACCTGCTCAAGGCCGGCAACGCTCGAGGACTCCACGGGCTTTGT
CAGGCCTGCGCATCG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig749:20596..27360-

>mRNA_L-elsbetiae_contig749.16380.1 ID=mRNA_L-elsbetiae_contig749.16380.1|Name=mRNA_L-elsbetiae_contig749.16380.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1464bp|location=Sequence derived from alignment at L-elsbetiae_contig749:20596..27360- (Laminarionema elsbetiae ELsaHSoW15)
ATGTCCTTCAAAAAGCTACCGGAGTTGTGCAGAGAAGCGTCAGGAGGCAA
GCTCGGGGCGTTGCGCAACCTTCTGCGGTTCTTGCGGAAAGAGAAGATGT
CCTTCAAAAAGCTACCGGAGTTGTGCAGAGAAGCGTCAGGAGGCAAGCTC
GGGGCGTTGCGCAACCTTCTGCGGTTCTTGCGGAAAGAGAAGGTACGGCG
CCCCGACCTCTGCCTCGAGCATGGGAAGCAGCTGCTCGCTTTCAGGAGTA
GCCTGGGAGATGAGCTCTGGGTCATCCACGAGCAGGTACGGCGCCCCGAC
CTCTGCCTCGAGCATGGGAAGCAGCTGCTCGCTTTCAGGAGTAGCCTGGG
AGATGAGCTCTGGGTCATCCACGAGCAGATGGTAACGGCCGCATTAGATT
CGGGCGACCTCGCCACCGCCCACGAGCACCTGGAGGTGTTGAAGGCGAAG
TTTCCGGGCAGCCAGCGCGTGCGACGCCTGGAGGGCATGCGGTGCGAAGC
AGAGGGGGGCTTTTCGGCCGCGTCTAAGATCTACGAGGAGATGCTTGTGG
CGAACCCGGCCAACTCACTCGCCCGCAAGCGACAGATGGTAACGGCCGCA
TTAGATTCGGGCGACCTCGCCACCGCCCACGAGCACCTGGAGGTGTTGAA
GGCGAAGTTTCCGGGCAGCCAGCGCGTGCGACGCCTGGAGGGCATGCGGT
GCGAAGCAGAGGGGGGCTTTTCGGCCGCGTCTAAGATCTACGAGGAGATG
CTTGTGGCGAACCCGGCCAACTCACTCGCCCGCAAGCGACAGGTGGCGGT
GCTGATCGCTCAGGCGGACACGGCGGGGGCGGTGAAGGCTCTGAACGGCT
ACCTGGCAGAGTTCGCGGCGGATGGGGAGGCGTGGCTGCAGCTCGCCAAG
CTGCACATCAGCGCCCTCAGCTACGAGGTGGCGGTGCTGATCGCTCAGGC
GGACACGGCGGGGGCGGTGAAGGCTCTGAACGGCTACCTGGCAGAGTTCG
CGGCGGATGGGGAGGCGTGGCTGCAGCTCGCCAAGCTGCACATCAGCGCC
CTCAGCTACGAGGCGGCGGCGTTTTGCTACGAGGAGCTGGTGTTGATTTC
TCCTTCGGACCATGTGGTGCACTGTCGCCTAGGGGAGCTGTACTACACCA
TGGGGGGCGGCGGCGTTTTGCTACGAGGAGCTGGTGTTGATTTCTCCTTC
GGACCATGTGGTGCACTGTCGCCTAGGGGAGCTGTACTACACCATGGGGG
GTGCGGAGAACCTTTTGCGCGCGCGAAAACACTTCTCCCAGTCGGTCGAC
CTGCTCAAGGCCGGCAACGCTCGAGGACTCCACGGGCTTTGTCAGGCCTG
CGCATCGGTGCGGAGAACCTTTTGCGCGCGCGAAAACACTTCTCCCAGTC
GGTCGACCTGCTCAAGGCCGGCAACGCTCGAGGACTCCACGGGCTTTGTC
AGGCCTGCGCATCG
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