|
Homology
BLAST of mRNA_L-elsbetiae_contig7489.16378.1 vs. uniprot
Match: A0A6H5JDL8_9PHAE (PhoLip_ATPase_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDL8_9PHAE) HSP 1 Score: 367 bits (941), Expect = 1.160e-121 Identity = 183/244 (75.00%), Postives = 204/244 (83.61%), Query Frame = 2
Query: 449 LSLSRFFFWVARP--MVPVID-DVNQQTATEGHKLYAVGRLGMDLNLRVMTKWVCQAVLDSFTVFFLPMAAYKDGTTVWAERGYGEGLFVFGTTVYAGLIMAMMMKVFNMTNTWNWQSWFFWWGSIGLFFFFISVYSLFVDWAYDFYFVAFQMMSRPTFWLILIQVPCVTWSLDALIKMLEHNFLPNVGHHAREFDRGFTSATGQQRLSEIKARARAEGLAPAAGTYTGGLQEIRGPQRDETTH 1171
L S F F++A P ++ + D DV QTATE HKLYAVGR GMDLNLR MTKWVCQA+LDS T+FFLP+AAY+D +TVWAERGYG+GL+VFGTTVYAGLIMAMMMKVFNMTNTWN+QSWFFWWGSI LFF FIS+YSL V +AYDFY VA Q+MSR FWLI+IQVPCVTWSLD LIKMLEHNF P VGHHAREFDRGFTS TGQQRL E K RARAE L+P G+YT +QEI GP+RD T H
Sbjct: 76 LVYSGFNFFLAMPILLIGIFDKDVGNQTATECHKLYAVGRAGMDLNLRTMTKWVCQAILDSLTIFFLPLAAYRDASTVWAERGYGDGLYVFGTTVYAGLIMAMMMKVFNMTNTWNYQSWFFWWGSIALFFSFISLYSLLVSYAYDFYNVAIQLMSRCAFWLIIIQVPCVTWSLDTLIKMLEHNFRPTVGHHAREFDRGFTSDTGQQRLKEFKDRARAEELSPTPGSYTD-VQEISGPKRDVTNH 318
BLAST of mRNA_L-elsbetiae_contig7489.16378.1 vs. uniprot
Match: D8LGJ4_ECTSI (Phospholipid-transporting ATPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGJ4_ECTSI) HSP 1 Score: 370 bits (951), Expect = 1.100e-113 Identity = 184/244 (75.41%), Postives = 204/244 (83.61%), Query Frame = 2
Query: 449 LSLSRFFFWVARP--MVPVID-DVNQQTATEGHKLYAVGRLGMDLNLRVMTKWVCQAVLDSFTVFFLPMAAYKDGTTVWAERGYGEGLFVFGTTVYAGLIMAMMMKVFNMTNTWNWQSWFFWWGSIGLFFFFISVYSLFVDWAYDFYFVAFQMMSRPTFWLILIQVPCVTWSLDALIKMLEHNFLPNVGHHAREFDRGFTSATGQQRLSEIKARARAEGLAPAAGTYTGGLQEIRGPQRDETTH 1171
L S F F+ A P ++ + D DV QTATE HKLYAVGR GMDLNLR MTKWVCQA+LDS TVFFLP+AAY+D TTVWAERGYG+GL+VFGTTVYAGLIMAMMMKVFNMTNTWN+QSWFFWWGSI LFF FIS+YSL V +AYDFY+VA Q+MSR FWLI+IQVPCVTWSLD LIKMLEHNF P VGHHAREFDRGFTS TG QRL EIKARARAE L+P G YT +QE+ GP+RD+ H
Sbjct: 999 LVYSGFNFFTAMPILLIGIFDKDVGNQTATECHKLYAVGRAGMDLNLRTMTKWVCQAILDSLTVFFLPLAAYRDATTVWAERGYGDGLYVFGTTVYAGLIMAMMMKVFNMTNTWNYQSWFFWWGSIALFFSFISLYSLLVSYAYDFYYVAMQLMSRSAFWLIIIQVPCVTWSLDTLIKMLEHNFRPTVGHHAREFDRGFTSETGLQRLDEIKARARAEELSPTPGGYTD-VQEVLGPKRDDANH 1241
BLAST of mRNA_L-elsbetiae_contig7489.16378.1 vs. uniprot
Match: W7TGI1_9STRA (Phospholipid-transporting ATPase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TGI1_9STRA) HSP 1 Score: 222 bits (565), Expect = 1.140e-60 Identity = 111/142 (78.17%), Postives = 126/142 (88.73%), Query Frame = 1
Query: 13 PPQAHVLGNPEAERMLLTLGSMCKSVIACRVSPAQKRLIVRLVKRGVVPRPVTLAIGDGANDVGMIQEAQIGVGISGKEGRQAVNNSDFAIAQFRFLKRLTLVHGHWDYRRICKVILYSFYKNFVLTFILFYYSFFTGFSGQ 438
P AHVLG+PE E M L L S+C+SV+ACRVSPAQKRL+VRLVK GV P P+TL+IGDGANDV MIQEAQIGVGISGKEG+QAVN++DFAIAQFR+L+RL L+HG +DYRR+ KVILYSFYKN VLTFILFYY FFTGFSGQ
Sbjct: 829 PALAHVLGDPEYEAMFLRLSSICRSVVACRVSPAQKRLVVRLVKAGVKPMPITLSIGDGANDVAMIQEAQIGVGISGKEGQQAVNSADFAIAQFRYLRRLLLIHGRYDYRRMSKVILYSFYKNMVLTFILFYYLFFTGFSGQ 970
BLAST of mRNA_L-elsbetiae_contig7489.16378.1 vs. uniprot
Match: A0A836CHZ9_9STRA (Phospholipid-transporting ATPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHZ9_9STRA) HSP 1 Score: 221 bits (563), Expect = 2.400e-60 Identity = 105/138 (76.09%), Postives = 123/138 (89.13%), Query Frame = 1
Query: 25 HVLGNPEAERMLLTLGSMCKSVIACRVSPAQKRLIVRLVKRGVVPRPVTLAIGDGANDVGMIQEAQIGVGISGKEGRQAVNNSDFAIAQFRFLKRLTLVHGHWDYRRICKVILYSFYKNFVLTFILFYYSFFTGFSGQ 438
H+LG+ + + + L + MC+SV+ACRVSPAQKRL+VRLVK+ V P P+TLAIGDGANDVGMIQEAQ+GVG+SGKEGRQAVNN+DFAIAQFRFL+RL LVHGHWDYRR+CKVILYSFYKN LTFILFYY F++G SGQ
Sbjct: 953 HILGHDDKQALFLRVACMCRSVVACRVSPAQKRLLVRLVKKNVRPAPITLAIGDGANDVGMIQEAQVGVGMSGKEGRQAVNNADFAIAQFRFLRRLLLVHGHWDYRRLCKVILYSFYKNIALTFILFYYCFYSGLSGQ 1090
BLAST of mRNA_L-elsbetiae_contig7489.16378.1 vs. uniprot
Match: A0A7S4D8B9_HETAK (Phospholipid-transporting ATPase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D8B9_HETAK) HSP 1 Score: 206 bits (524), Expect = 5.260e-57 Identity = 100/138 (72.46%), Postives = 116/138 (84.06%), Query Frame = 1
Query: 25 HVLGNPEAERMLLTLGSMCKSVIACRVSPAQKRLIVRLVKRGVVPRPVTLAIGDGANDVGMIQEAQIGVGISGKEGRQAVNNSDFAIAQFRFLKRLTLVHGHWDYRRICKVILYSFYKNFVLTFILFYYSFFTGFSGQ 438
H++G E ER L + +C+SVIACRVSP QKRL+VRLVK GV P+TLA+GDGANDVGMIQEAQ+GVGISGKEGRQAVN +DFAIAQFRFL+RL +HG WDYRR CKV+LYSFYKN VL FILFY++ F G+SGQ
Sbjct: 173 HIMGRAELERKFLRVARLCRSVIACRVSPEQKRLLVRLVKLGVEGAPITLAVGDGANDVGMIQEAQVGVGISGKEGRQAVNTADFAIAQFRFLRRLLFLHGRWDYRRTCKVVLYSFYKNMVLAFILFYFTCFCGWSGQ 310
BLAST of mRNA_L-elsbetiae_contig7489.16378.1 vs. uniprot
Match: A0A7S1C2W0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C2W0_9STRA) HSP 1 Score: 188 bits (478), Expect = 4.050e-54 Identity = 96/142 (67.61%), Postives = 114/142 (80.28%), Query Frame = 1
Query: 25 HVLGNPEAERMLLTLGSMCKSVIACRVSPAQKRLIVRLVK-----RGVVPRPVTLAIGDGANDVGMIQEAQIGVGISGKEGRQAVNNSDFAIAQFRFLKRLTLVHGHWDYRRICKVILYSFYKNFVLTFILFYYSFFTGFSG 435
H+LG+PE+E L+ + +CKSVIACRVSP QK +V LV+ R +P+ LAIGDGANDVGMIQ+AQ+GVGISGKEG QAVN+SDFAIAQFRFL+RL LVHG W YRR+ KV+LYSFYKN V+T LF+YS FTGFSG
Sbjct: 46 HILGDPESEHALMVVAQLCKSVIACRVSPKQKADLVDLVRHRSPGRSGKNKPMCLAIGDGANDVGMIQQAQVGVGISGKEGLQAVNSSDFAIAQFRFLRRLLLVHGRWSYRRMSKVVLYSFYKNIVITLTLFFYSMFTGFSG 187
BLAST of mRNA_L-elsbetiae_contig7489.16378.1 vs. uniprot
Match: W7TQX5_9STRA (Phospholipid-transporting ATPase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQX5_9STRA) HSP 1 Score: 197 bits (502), Expect = 3.080e-52 Identity = 98/143 (68.53%), Postives = 120/143 (83.92%), Query Frame = 1
Query: 13 PPQAHVLGNPEAERMLLTLGSMCKSVIACRVSPAQKRLIVRLVKRGVV-PRPVTLAIGDGANDVGMIQEAQIGVGISGKEGRQAVNNSDFAIAQFRFLKRLTLVHGHWDYRRICKVILYSFYKNFVLTFILFYYSFFTGFSGQ 438
P + G+ E ER+LL + +CKSV+ACRVSPAQKR+++RLVK+GV P+P+TLAIGDGANDV MIQEAQ+GVGISG+EGRQAVN++DFAI+QFRF++ L L HG W YRR KVILYSFYKN VLTF+LF Y++ TGFSGQ
Sbjct: 1039 PSLGRIFGDWEMERLLLRVARLCKSVVACRVSPAQKRMLIRLVKKGVKHPKPITLAIGDGANDVAMIQEAQVGVGISGREGRQAVNSADFAISQFRFIEPLLLKHGRWSYRRTSKVILYSFYKNIVLTFVLFAYTWLTGFSGQ 1181
BLAST of mRNA_L-elsbetiae_contig7489.16378.1 vs. uniprot
Match: A0A7S2CMU9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CMU9_9STRA) HSP 1 Score: 190 bits (483), Expect = 3.860e-52 Identity = 96/142 (67.61%), Postives = 117/142 (82.39%), Query Frame = 1
Query: 13 PPQAHVLGNPEAERMLLTLGSMCKSVIACRVSPAQKRLIVRLVKRGVVPRPVTLAIGDGANDVGMIQEAQIGVGISGKEGRQAVNNSDFAIAQFRFLKRLTLVHGHWDYRRICKVILYSFYKNFVLTFILFYYSFFTGFSGQ 438
P ++ + EA LL LG CK+V+ACRVSPAQK+LIV++VK G+ +P+TL+IGDGANDV MIQEAQIGVGISGKEGRQAVN+SDFAIAQFRFLKRL LVHG W+Y R KVI+YSFYKN VL ++LF+++ +GFSGQ
Sbjct: 44 PALLEIMDDEEARHQLLQLGCFCKAVLACRVSPAQKQLIVKMVKDGLPTKPITLSIGDGANDVPMIQEAQIGVGISGKEGRQAVNSSDFAIAQFRFLKRLLLVHGRWNYLRTAKVIIYSFYKNTVLVWLLFFFACESGFSGQ 185
BLAST of mRNA_L-elsbetiae_contig7489.16378.1 vs. uniprot
Match: A0A7S1RHK8_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1RHK8_ALECA) HSP 1 Score: 183 bits (465), Expect = 2.160e-51 Identity = 89/125 (71.20%), Postives = 109/125 (87.20%), Query Frame = 1
Query: 61 LTLGSMCKSVIACRVSPAQKRLIVRLVKRGVVPRPVTLAIGDGANDVGMIQEAQIGVGISGKEGRQAVNNSDFAIAQFRFLKRLTLVHGHWDYRRICKVILYSFYKNFVLTFILFYYSFFTGFSG 435
L L + CK VI CRVSPAQK +VRLV++G+ P+PVTLA+GDGANDV MIQ+AQ+GVGISG+EGRQAVN SDFAIAQFR+L+RL LVHG W+YRR+CK +LYSF+KN VLT +LFYY+F +G+SG
Sbjct: 14 LELATSCKVVICCRVSPAQKAQMVRLVRKGIHPQPVTLAVGDGANDVPMIQQAQVGVGISGREGRQAVNASDFAIAQFRYLQRLLLVHGRWNYRRMCKFVLYSFWKNAVLTLLLFYYTFVSGYSG 138
BLAST of mRNA_L-elsbetiae_contig7489.16378.1 vs. uniprot
Match: A0A7S2SGQ6_9STRA (Phospholipid-transporting ATPase (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SGQ6_9STRA) HSP 1 Score: 185 bits (469), Expect = 3.350e-50 Identity = 96/142 (67.61%), Postives = 112/142 (78.87%), Query Frame = 1
Query: 13 PPQAHVLGNPEAERMLLTLGSMCKSVIACRVSPAQKRLIVRLVKRGVVPRPVTLAIGDGANDVGMIQEAQIGVGISGKEGRQAVNNSDFAIAQFRFLKRLTLVHGHWDYRRICKVILYSFYKNFVLTFILFYYSFFTGFSGQ 438
P +L + A + LL LGS C VIACRVSPAQK+ +V LVK G +P+TL+IGDGANDV MIQEAQIGVGISGKEG QAVN+SDFAIAQFRFL+RL LVHG W+YRRI KVI+YSFYKN VL +LF Y+ ++ FSGQ
Sbjct: 243 PSLTDILDDSAARQSLLALGSRCSVVIACRVSPAQKQQVVHLVKYGFKTKPITLSIGDGANDVPMIQEAQIGVGISGKEGLQAVNSSDFAIAQFRFLERLLLVHGRWNYRRISKVIVYSFYKNIVLVVVLFLYACYSSFSGQ 384
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Taxonomic scope | Eukaryota |
Seed ortholog score | 234.6 |
Seed ortholog evalue | 3.1e-59 |
Seed eggNOG ortholog | 2880.D8LGJ4 |
Preferred name | DNF3 |
KEGG rclass | RC00002 |
KEGG ko | ko:K01509,ko:K01530,ko:K14802 |
KEGG TC | 3.A.3.8 |
KEGG Reaction | R00086 |
KEGG Pathway | ko00230,ko04742,map00230,map04742 |
Hectar predicted targeting category | mitochondrion |
GOs | GO:0000749,GO:0003674,GO:0003824,GO:0004012,GO:0005215,GO:0005319,GO:0005548,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005794,GO:0005798,GO:0005802,GO:0005886,GO:0005937,GO:0006810,GO:0006811,GO:0006820,GO:0006869,GO:0006886,GO:0006892,GO:0006900,GO:0006996,GO:0008104,GO:0008150,GO:0009987,GO:0010033,GO:0010876,GO:0012505,GO:0015031,GO:0015711,GO:0015748,GO:0015833,GO:0015914,GO:0016020,GO:0016021,GO:0016043,GO:0016050,GO:0016192,GO:0016197,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019236,GO:0030133,GO:0030135,GO:0030136,GO:0030140,GO:0030427,GO:0031136,GO:0031137,GO:0031139,GO:0031224,GO:0031410,GO:0031982,GO:0031984,GO:0032456,GO:0033036,GO:0034204,GO:0034613,GO:0042221,GO:0042623,GO:0042886,GO:0042995,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043332,GO:0043492,GO:0043900,GO:0043902,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044444,GO:0044446,GO:0044459,GO:0044463,GO:0044464,GO:0045184,GO:0045332,GO:0046907,GO:0046999,GO:0048193,GO:0048194,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051234,GO:0051286,GO:0051641,GO:0051649,GO:0051716,GO:0061024,GO:0065007,GO:0065008,GO:0070727,GO:0070867,GO:0070887,GO:0071310,GO:0071444,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0097035,GO:0097708,GO:0098791,GO:0120025,GO:0120038,GO:2000241,GO:2000243 |
EggNOG free text desc. | phospholipid-translocating ATPase activity |
EggNOG OGs | COG0474@1,KOG0206@2759 |
EC | 3.6.1.3,3.6.3.1 |
COG Functional cat. | P |
Best tax level | Eukaryota |
Best eggNOG OG | NA|NA|NA |
BRITE | ko00000,ko00001,ko01000,ko03009 |
Exons | 8 |
Model size | 1171 |
Cds size | 450 |
Stop | 1 |
Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816832.2918084-UTR-L-elsbetiae_contig7489:172..226 | 1622816832.2918084-UTR-L-elsbetiae_contig7489:172..226 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig7489 173..226 + |
1691683847.1504164-UTR-L-elsbetiae_contig7489:172..226 | 1691683847.1504164-UTR-L-elsbetiae_contig7489:172..226 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig7489 173..226 + |
1622816832.338521-UTR-L-elsbetiae_contig7489:3971..3972 | 1622816832.338521-UTR-L-elsbetiae_contig7489:3971..3972 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig7489 3972..3972 + |
1691683847.2194302-UTR-L-elsbetiae_contig7489:3971..3972 | 1691683847.2194302-UTR-L-elsbetiae_contig7489:3971..3972 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig7489 3972..3972 + |
1622816832.350211-UTR-L-elsbetiae_contig7489:5856..5934 | 1622816832.350211-UTR-L-elsbetiae_contig7489:5856..5934 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig7489 5857..5934 + |
1691683847.2379415-UTR-L-elsbetiae_contig7489:5856..5934 | 1691683847.2379415-UTR-L-elsbetiae_contig7489:5856..5934 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig7489 5857..5934 + |
1622816832.3608773-UTR-L-elsbetiae_contig7489:6844..7036 | 1622816832.3608773-UTR-L-elsbetiae_contig7489:6844..7036 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig7489 6845..7036 + |
1691683847.2670074-UTR-L-elsbetiae_contig7489:6844..7036 | 1691683847.2670074-UTR-L-elsbetiae_contig7489:6844..7036 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig7489 6845..7036 + |
1622816832.3707626-UTR-L-elsbetiae_contig7489:7998..8157 | 1622816832.3707626-UTR-L-elsbetiae_contig7489:7998..8157 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig7489 7999..8157 + |
1691683847.2772787-UTR-L-elsbetiae_contig7489:7998..8157 | 1691683847.2772787-UTR-L-elsbetiae_contig7489:7998..8157 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig7489 7999..8157 + |
1622816832.3805194-UTR-L-elsbetiae_contig7489:8548..8633 | 1622816832.3805194-UTR-L-elsbetiae_contig7489:8548..8633 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig7489 8549..8633 + |
1691683847.2893226-UTR-L-elsbetiae_contig7489:8548..8633 | 1691683847.2893226-UTR-L-elsbetiae_contig7489:8548..8633 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig7489 8549..8633 + |
1622816832.390862-UTR-L-elsbetiae_contig7489:9048..9200 | 1622816832.390862-UTR-L-elsbetiae_contig7489:9048..9200 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig7489 9049..9200 + |
1691683847.29962-UTR-L-elsbetiae_contig7489:9048..9200 | 1691683847.29962-UTR-L-elsbetiae_contig7489:9048..9200 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig7489 9049..9200 + |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622816832.3034668-CDS-L-elsbetiae_contig7489:226..394 | 1622816832.3034668-CDS-L-elsbetiae_contig7489:226..394 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig7489 227..394 + |
1691683847.1744616-CDS-L-elsbetiae_contig7489:226..394 | 1691683847.1744616-CDS-L-elsbetiae_contig7489:226..394 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig7489 227..394 + |
1622816832.3145983-CDS-L-elsbetiae_contig7489:3211..3343 | 1622816832.3145983-CDS-L-elsbetiae_contig7489:3211..3343 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig7489 3212..3343 + |
1691683847.1887553-CDS-L-elsbetiae_contig7489:3211..3343 | 1691683847.1887553-CDS-L-elsbetiae_contig7489:3211..3343 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig7489 3212..3343 + |
1622816832.3274271-CDS-L-elsbetiae_contig7489:3821..3971 | 1622816832.3274271-CDS-L-elsbetiae_contig7489:3821..3971 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig7489 3822..3971 + |
1691683847.2002113-CDS-L-elsbetiae_contig7489:3821..3971 | 1691683847.2002113-CDS-L-elsbetiae_contig7489:3821..3971 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig7489 3822..3971 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig7489.16378.1 >prot_L-elsbetiae_contig7489.16378.1 ID=prot_L-elsbetiae_contig7489.16378.1|Name=mRNA_L-elsbetiae_contig7489.16378.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=150bp
MLLTLGSMCKSVIACRVSPAQKRLIVRLVKRGVVPRPVTLAIGDGANDVG MIQEAQIGVGISGKEGRQAVNNSDFAIAQFRFLKRLTLVHGHWDYRRICK VILYSFYKNFVLTFILFYYSFFTGFSGQVCVPLAVTFFFLGCASDGSCY* back to topmRNA from alignment at L-elsbetiae_contig7489:173..9200+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig7489.16378.1 ID=mRNA_L-elsbetiae_contig7489.16378.1|Name=mRNA_L-elsbetiae_contig7489.16378.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=9028bp|location=Sequence derived from alignment at L-elsbetiae_contig7489:173..9200+ (Laminarionema elsbetiae ELsaHSoW15) GTTTTGCCCCCCCCCCCCCAGGCCCACGTTCTCGGGAACCCGGAGGCCGA
GCGGATGCTGCTGACCCTGGGGAGCATGTGCAAGAGCGTGATCGCGTGCA
GGGTGAGCCCGGCCCAGAAGCGGCTGATCGTGCGGCTGGTGAAGAGGGGG
GTGGTGCCGAGGCCGGTGACCCTCGCCATCGGCGACGGGGCCAACGACGT
GGGCATGATCCAGGAGGCGCAGGTGAGGGGGAGACAGGCAGATAGCACAG
CAGTCACACACGCACCCTGTTTTTGTGAGCACGGGCCCACGGGCCCCTGT
GGATGTTTTTGGACCAAATGGGGAGCTTATGTGAGAAACAACAACAAAAC
AACGACACACACATGTACAAAGGAGAGAGAGAGAGAGGGGGGGGGGGGGG
GGGGGCTAACCTACCCTTTGGTTTCGCTCTGTGTGGGGGCATGTACGTAG
AGGTGGGAGGAAATAAATACACCCCACACGNNNNNNNNNNGGGGGGGGTG
TGAGGAAAGGGGGGGAAAAAAAGGAAAAAAAAAAAAAAAAAAAACAAACA
AGAAAAAGAAAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTGCTA
AGCTACTCTTTGGTTTCGCTCTGTGTGTGGGCATGTACGTAGAAGTGGTA
GAATATACATACACTCCATACGATTCGGCTTCCCCTCTCTTGTTTTTTCC
CTGGTGTATGGTATGGTATGGTCTGCTGAAACGTTTTTTCGTGTTCAGGT
TGCCTGCTGTGGTTGCCGTCATGCCATTGAGCGAGCCGCCGGCAAAACCC
TCCCGTGTCTCTCTCTCTCCACATAATTAGTCCGTTCACGCATTTGGTTT
TCGGTGAAGTGCGCGATGAACCTCCGCTTCGGGTGCCACACACGGTGAAC
AAACAACAGCAGCAAGTGCGATGTGCACATACATGCGCCTTTTTTTTTTT
ACACAAATTCCACGACGGTTTTTGCTTGTGCGGAGCTATTTATATACCGT
ATGGTAGGTGACACAAGATAGCACACCCCCTGGAAGTATTTTCGAAGCCC
GATTCCTCCCCAGCAAGAAGAGTACCAGTGCCGAAAGGGGTGGCGTTGGA
AAGATCCATGTTGTCGAAAGCTGTCCGAAAATGTGTTGTTTGGTGCTAGT
AGCACCCTCTTCGTTACAGAGTTATGGAGCTCTAAAGTTCGATCCAGGGT
GTGTGGTATCTTGTGTCACCTACGGTAAGTACATGTATTTACTGGCGATT
GTATGCACAAACATTGCTGCGGAGTATAAACTGGACCACCTTCGCGAAGA
ACTGAATTTTATCTGTGAAATAGAGACAGGGGTTCCGTAACCCTAACACC
CTATAAAACCCCAATCCCAAACCGACCCCCCCCCCCCCCCCCCGGCTCAG
CTCTGTCCATACTTTTATCCCGTATTTTAGCTGACGCCTAAAACCCGCGT
GGGTTACTGTTGTTTGAGCCTACCGTAGGTGACATAAGATAAGACACCCC
CTGGACCGATTTTCAAAGCTCAAGTACTCCACAGCAAGCAGAGCGTCAGT
CCCGAAAAGGACGGCGTTGGGAAGATCTCGTCGAGAGCTTTCCGAAAATG
TGGCGTTTGTGATTACGTAGAATCGTATTCGTTGCGGAGTAACCAAGCTT
TCAATATCGGTCCAGGTGGTGTCTTATCTTATGTCACCTACGGTACCCCC
GTACCCGCACCCGGCTTTTCCTCCCGCGCTCTTTTGGGCTGCGGGCGCAA
TCGCATCGCCTCGTACATCGCTTGTGTATGTGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGTCCTTCCCATTTATTTTGGCGACGTCCTCCCAAGTGGAGA
CGTGTACTACACCTTGCGGTGTACTTAGAGGTACTAACTACACTTTGCAG
TGCATTTGTCTGTCTGTACAACTAGAACCAACCGGGGTCACACGTCGCTT
GGATTTATTTATTCGCCAAAGTACGTACGAAAAGCCGCGAAAAAAAAAAC
GTACGCGCCATTTTCAACGCATACATACATACATACATATCCTGCGTGCC
CTATTAACATATCATACATACTTCATATTTTCTGTTTTCATTTTTGTGCG
TCCAGATCGGGGTGGGCATAAGCGGGGGAAGGATAATGGGGCATATGAAC
AATGAACATGCGTATCCGCCCGCGTGTAGAGGGGAGCGGAGGGCTCTAGA
TTCGATATCTGTTTTATTGTTGCTTTGCTGGCCCTTCGAGTCCATTATAT
TTTACGTGTACCTTTGATTGGGTGTAAGTTAAGCCTGTGACCACGGGAAT
TGACCGCATCAAGTGTTGGATTAGTACGGACATTGAGAGGTGCTGGATGG
AGAGATCGGAACGGTTTCTAATGTGAAGACAACATACATACACACATACA
TACATACATACATCCGCCCCGCTCCTGCCTTTGCCTGCCGTGCTCTTTTG
GCCGCGAGCGCAGTCGCATCGCCTCTTGCATGCATCGCCTGGCCTCGATT
TCCTTCATCACAAAAAATATGCGTGACGTCACGAGAGAAACAAAAATACA
CGACGCACCAATTGTTTTTTGTGTAATTTTACATGTGTAATTATCTGTGC
ATTACTATTTTTTCTGTGCTTTATGGTGGACCCTTCTAATCTTGGGATGC
ATTTTTTTTTTTTTCCAGTATTTATTACAAATACCCTTTTTAGGATCAAT
TGTCCTGTCACCACGGTAATCGACCGCGTCAGTGTTGGATTAGTACGGAC
TCAGGGAGGTGTGCTGGATAGAGAGATCGGAACGGTTTTTCATGTGAAGA
CAACAACAACAACAACAACAACAATGAACTGGATCGCCTTCGTAAGAAAA
TGAAGTTTATCTATGAAATAGAGACAGGAGTTCCGTAACCCTAATGCCAA
ACCGACCCCCCCCCGCTCAGCTGTGTCCATACTTTTATCCCCCATGTGTT
AGCTTACAGATGTATCTGGGGGTGCATTATTCCCTCAACTAAAATGAATA
TTTTCTGTTTTTTTTTTTTTCTTTCGCGCGTGCGCCCAGATCGGGGTGGG
GATCAGCGGGAAGGAGGGCAGGCAGGCGGTCAACAACTCCGACTTCGCGA
TCGCGCAGTTTAGGTTCTTGAAGCGGCTCACGCTGGTGCATGGGCACTGG
GACTACCGCCGCATATGCAAGGTGCGTGGCTGTGTGTGTCTGGCTGTGTG
AGAAAGATGTGAACATGTACATGGGTCCTCTTGGGGAGCATATTTGTGTA
CGTGCTTGGGGAAGGACGTACATGTAGATATGTCAGGTTGTCGTTTTGAG
TACCGTGCTTTGTTCCGCGGTGGTAGTTATGGAATGAGATGGATGTGTTG
GGTGTATTCGCGCTTTGTACTGTACTGCTTTATTGTGATTGGTGCGTGTT
GGCGGGTGTGTACGTTGATTTTTACACCTGCTCTTGTTGTCGCCTGCTGC
CTCTCTCTCTCTCTCTCTCTCTCTCTCTGTTGTCGTGGCTCTAGTAGACC
TATCTATGAAAAAAGAAATTGTACATATTTAGCCCGAAGCTCGTGCATAT
CTGTCCTTCATTTATCCTTGCCTCGACGGTCGGAGCTTTTTTTTTTTTTT
TATAATTTGTGTTTCCTCTGTTTCTCCCTTTTGCGGCCGGTGTGCGCAGG
TGATTCTCTACAGCTTCTACAAGAACTTCGTGCTGACTTTCATCCTCTTC
TACTACTCCTTCTTCACCGGGTTCAGTGGCCAGGTGTGTGTTCCTCTCGC
TGTCACGTTTTTTTTTTTGGGTTGCGCGTCCGATGGTTCCTGTTATTGAT
GTCTTGATGCTTTATTTCCCCTCTCTCTGCTGAGGAGACACATATCATAT
GTACGAACCTGAAGTTGCGCAGGTTGAGGCGCCGTGCGTTTTCTACTAAA
CCCCGTCTCTCTTTTGTATACTTATGTATTTTAATGAGCCGCGGAGCGGC
GAAGCCGCGACCTTTTTTTCCTTTCATCCCCCTGGGAGGGAAAAAAAGCC
TCCAAGTATCGGGCAAAGTTACCCCGCTCGCGTGTAGCGCCCCTCCAAAC
TTGATTATCGAACGTGAAAAAACACCCTCCTTTTCGGCCAGAACAAAGTC
TATAGAGCACCGATTGACGATCTGTTGCCTTCTGAGAGGGGAGATAGACT
AGGGAATCTTCTTCGCGCCTGTTTAGCTGTGCTCCGACAACAGATGGCCG
CGCTTCACAGTCGTTTATCCAATTTTATTACGGAGACCCGGGCTGCGTAA
GAGCAAACCTCGGGTCTGACATGAGAAAGGCATGCTAGCCGGAGATCCCG
AATTTTGACAGTCTCGCCATCTTGTGGAGAGACCACAGAGGGGTAGCACA
CAGCACCCACTCTAGGACGAGGGAGGAGCGAGACGAGACTGGCGGGGGAA
GGGCGGCATGGGTTCCCTGGTCATACAGGGGTGACATGGTACTGACAGCA
CAGAATTCCAAAAACGCACGCGCCGCGGTGTGTGCGTGCGAGACAAACAC
ACGAGGCCACTTTGCTCAGCCAGAGGGTTGGGGTCACATTAACCCTATAG
CTTTTCGCACCCCTGCCAGGGCACAGGAAATATGGGCCCTGTAGAGGATT
CGGGCCCTCTGTAGAGGGAGTAAGTACCTCAGGGTTGACGTTTGGAATAA
AACTGAAAATATATCTACACAAAGTAAACCGACTTTTTTCGAAAAAAAAA
GAGAAGGTCTCACCAGGTTGGAACCCGGGCGGGATGAGCTCGAATCGTTC
GCTCCCGCCTCTACACTAGATTCTATTGGATATGATGGTCTTGCGAATAG
AAGTATATGTATACTTCGAAGTATTTACTGTATGGAATCGTCCTTCAAAA
CCCCACCTACATACGTGAACGCTGCTGCTGTCGGCTCTACGCGGAGCTGC
ATTACCACAGCGTATTGGGGTCATCACAGATTTCAAACGTGGCCACTATG
CTCTCCAAGAGGGTTGGGGAATAATCCTGTGGCATTTCGCACCCCTGCCA
GGGCAAAAAGTGGCCACGTGTAAATGGCCTCGAGCCACGAACGGTGTGCC
GGTTGTGTTAGTTGTGGTGGGTGCGTGGATCCGCGGGTTGGGTTGTGTTT
GTTGGGTTGGGTTGCGTTGGATTGGGTGGGGTTGAGGCCTTGGGCCCGCA
GGTGGGTTGGGTTGGATTGGGTTGGGGCCGTGGGTCCGCGGGTGGGTCTT
TGGTTGGGTTGAGTTGAGTTGGGTTGGGTGGGGTTGGGGCCGTGGGCCCG
CGGGTGGGCTGGTCAGACTACTGCAAGGTATTGAGCCGGTGCTGGTTGGG
TTGGGCTGGGTGTGTGCGGCTCATTATTCGCAAACTAGTATAAAGGGGGT
ATATACTTGAGTTCCTGTTTCTGCGCCCCTGTTCTTTTGCGATCCGGGCT
GCTTCATGCTCTACATAGGTACGAAGGGTGCGAGAAGCATACGCTGTCGC
TTTTCGAGTTTTCCACGCGCACTGACTGACTGCTGTGTTTTTTAACTTTT
GACCCTTGAACGACAAACCGTTTTTGTGTGCGTGTATTCCCCCCCCCCCC
CCCCCTCTAATTTACAATTTCTTTTTTCAATACATACATTAAAACATTTA
CGGGCTCTTTTTGGGCCCCGGGTTGCCTCCGGGTTCAACTTCTTCACGGC
CATGCCGATCCTGCTGGTGGGCATCTTCGACAAGGACGTCAACCAGCAGA
CCGCAACGGAGGGCCATAAGCTCTACGCGGTTGGGCGCCTCGGCATGGAC
CTCAACCTCAGGGTGAGAAGACATGGAAGAGAAGTACATATTTATGTAAA
TAAATATCGCACAACTTCGCGGTGTGATAGCGATAATAGATGGCACAAAA
ATGCGGCAGTAAAAATACTTTTTAAGCGCAGCTGGTTTGCGCCGAGGGGG
GGGGGGCTCTGAAGAGGCCACAGCGTCCCGACAGCAAGTATTGGCAGCCC
CATTCCTTGACCCCTGATTGCACGTACGGAGCTGTCTGCTCTTGGTGCGC
CTGTGCGAGGGTGGGGTCGGGTCGATATAGTCGTACTTCTTTGGCTTCGC
TTTTTCGATGATGGTCGATCGATGATGAAGTATGATCGATGACGGGCATC
GGCCGTGGGCATAAACAAGTGTGGAGTGCCAGCAGGTTGAGCGGTGCGGA
TGGATCGTGTGCGCGTTCCCTGGGAGGCGAGTGAGAGCGCCACGCGCTGC
ATTGCTCTGCTCTTCTCAGCCCTCTTGGCCTCCCGGAAAAAAATGTCCCA
ATACATGTACTCTTAATAGCTTGTCTTGCTGCATGCATCAACCAGGTCAG
ACAGAACCTGGACTGCATGAAGATGCGTGCCGTGCGGTTGGTTGTATCTA
GCTGGCCTTAGCTTGGCTTGGCTTGAATCGCTGCAGGCGTTCTTCGAGAC
CCTACGTATTGAGTCACTGAGACGACGTGTCTCTCTCTGTCTCTCGTTAT
TTCATCCGGGCCTCACGGCGGCAGCAGCCCTCTGCTTGATTTTATTTCAG
TCCGGCGACGCTTTCGCTCGCCGCTGTCCCGGAAGTGAGTGCTGGAGCGT
TTGAAGCCGACCGCAATCATTCCCGCTCGCGCCCGCCGGCGTCTCGTTTG
GTTTCGGTTCCGGTTCCGGTTCGGTTCCGGTTCGGTTTCGGTTCGGTTTC
GGTTTCGGGCTCGGTTTCGCAGGTGATGACGAAGTGGGTGTGCCAGGCGG
TGCTGGACTCCTTCACGGTCTTCTTCCTGCCGATGGCGGCCTACAAGGAT
GGCACGACGGTGTGGGCCGAGAGGGGCTACGGCGAGGGGCTGTTCGTGTT
CGGCACCACCGTGTACGCCGGGCTCATCATGGCAATGATGATGAAGGTCT
TCAACATGACCAACGTGAGCGGGAGAGCGGGAGCTGTCTTTTTGTTTGTT
TTTGTCATTTGGGGGGGGGGTGTAGCATCACGTTGAATGAAGTTTCTGCC
GGTATTTTTACCCAGACGTCGGCAGCTTACATGCGTTACCATAGTTAGGC
CTGTGAGAATGTTAAATGTTTTCCCAGAGGGACTGACTGCCTGTTGCAGA
GGCACTAATTCTTGCTCGCCGCCCCAGACTACGGTCGTTCGAACTACGGT
CTGTCCTCTGGTAAATATAGCCCTCACCCTAACCCTGTATTGTAACAGCA
GTGTTTTTTGTATTGTATACTTAGCGTGTAGTCCTTGCTTTGGCTTCGGT
GACTCAAAATTGCGATGCAAGCAAAAGCGGGTTTTGACGAGAGGTCTGTC
CTTCTTTTCCCTCCGTTTTTTTTTCTTCTTTTCACGATGATCCCTTATTC
CAGGTCATTATATATAAATATGTCGTGGTGTGATTTTTTTCGTTTTGTGG
GTGGTGGCTCTCTACCCCGTTAGTTGCCCGTTGCGCACCGTTCCCGGCAG
AGTTGTTGATTTCTGCGATTTTAGCGGGGAATCCGGTCAGGCGGCTTGGG
CACAAAACCGTACACCTTGCGTGGTCTGGGTCGTTCGTTCACTAATATAT
ACATATGTAGTGGTTAAAACGAAAAATAACTCCTATCGGGTTATTAGGGG
AGCTCAGGGTTAGTTTTTGTAGGGGCAGTCCCGGCTGCGCACGACGTCGA
AGATAGTCTAAACCGAATGGTGTAAGTAAGGCTGACGCCGGGATAGGTAA
TGGGGGAAGAAAAACTCAAAATGCAAGGTGACACCGATAGACTTTGGAGT
CAAGTCGCCCCCCCCCCCCCTCCCCCCCCCCCCCCCCGAGTGCTGATCCC
CCCTGCCCATATATCCCTGTTTGTTTCTGCTTGCTCTTTTCGATTCGGCA
CCACAAAAAACAAAAAACAAAAAAAGACCTGGAATTGGCAGAGCTGGTTC
TTCTGGTGGGGATCGATTGGCCTGTTTTTCTTCTTCATCTCCGTCTACTC
CCTGTTCGTGGATTGGGCGTACGACTTCTACTTCGTGGCCTTCCAGATGA
TGAGCCGCCCCACCTTCTGGCTCATCCTCATCCAGGTATTTATTTTGTAG
CTTTATACCTATGCAGGCATTGTGTGTCGCTGCTGCTGGGCCGTTTGTCG
TTGTTGGCGCAGGTGATGGTGGCTGGTGGTCGTCGGTCTTGTGCGTGTTT
TTTGGGTTCCATCCCAGTCTACTCATGGCGTCTGCCACCTTTCGGTGTTT
TGTCGTCTTGTGGAGCTAAGTAAACCGTATCATACCCCACCCGGGTCATG
CAGGCGTGTGTACTTTTCTTTTTGGTGATATTTTTGCAATGTACCGGGTG
GGCGGGTGGGTGGGTTCCCGACGTGCTGTGTGTTACAGGTATCATACCTG
CGCTTCAGTCTCATGTTTGATCTACCCCCCGTCCTGCCCCCATCTCTCCT
GCGTCTTTCTGTTGCGCGACAAATAGGTACCGTGTGTCACGTGGTCTCTC
GACGCGCTCATCAAGATGCTGGAGCACAATTTCCTCCCAAACGTCGGCCA
CCACGCCAGAGGTGAAAGGCAATAGAGACCCCCCACCCGAGACTATCGTA
CACACAATTCCTGGGGCTGCTGTAATCTGCGTGTAGAGGCGCACACCGTG
TCTGGCCTTGCACTTCGGATGTGTTCAAAGGGTTGCGTTTGTTATGTATA
TCCGACCGTGGCTGGCTTCAGAGACGTCGGCCCTCTGCAGCGAAACCTCT
GCGGCGAACTCTAGCAGCGAACTAGTCTAGACTGCCTGTTACTATGTTAT
GCTTCGCTGCTCACGCCTTCCCCTCCTTTCTTCCGCCGTCGTGCATATTT
ATGCTCCCGCTTGGCCCACGTGTTTCCCACCCCCCACCTCTTTTTTTTTG
TTGTTTCCTTAATGTATGTATCTGTTGTACCGCCGCCGCTTCGCCGTGGT
GGTGGTGGTGGTTTTGGGCGGCACAGAGTTCGACCGTGGCTTCACGTCGG
CGACCGGCCAGCAGCGGCTCAGCGAGATCAAGGCGAGGGCGAGGGCCGAG
GGGCTGGCCCCCGCGGCCGGCACGTACACGGGCGGCTTGCAAGAGATCCG
CGGCCCCCAGAGGGACGAGACGACCCAC back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig7489:173..9200+ >mRNA_L-elsbetiae_contig7489.16378.1 ID=mRNA_L-elsbetiae_contig7489.16378.1|Name=mRNA_L-elsbetiae_contig7489.16378.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=900bp|location=Sequence derived from alignment at L-elsbetiae_contig7489:173..9200+ (Laminarionema elsbetiae ELsaHSoW15) ATGCTGCTGACCCTGGGGAGCATGTGCAAGAGCGTGATCGCGTGCAGGGT GAGCCCGGCCCAGAAGCGGCTGATCGTGCGGCTGGTGAAGAGGGGGGTGG TGCCGAGGCCGGTGACCCTCGCCATCGGCGACGGGGCCAACGACGTGGGC ATGATCCAGGAGGCGCAGATGCTGCTGACCCTGGGGAGCATGTGCAAGAG CGTGATCGCGTGCAGGGTGAGCCCGGCCCAGAAGCGGCTGATCGTGCGGC TGGTGAAGAGGGGGGTGGTGCCGAGGCCGGTGACCCTCGCCATCGGCGAC GGGGCCAACGACGTGGGCATGATCCAGGAGGCGCAGATCGGGGTGGGGAT CAGCGGGAAGGAGGGCAGGCAGGCGGTCAACAACTCCGACTTCGCGATCG CGCAGTTTAGGTTCTTGAAGCGGCTCACGCTGGTGCATGGGCACTGGGAC TACCGCCGCATATGCAAGATCGGGGTGGGGATCAGCGGGAAGGAGGGCAG GCAGGCGGTCAACAACTCCGACTTCGCGATCGCGCAGTTTAGGTTCTTGA AGCGGCTCACGCTGGTGCATGGGCACTGGGACTACCGCCGCATATGCAAG GTGATTCTCTACAGCTTCTACAAGAACTTCGTGCTGACTTTCATCCTCTT CTACTACTCCTTCTTCACCGGGTTCAGTGGCCAGGTGTGTGTTCCTCTCG CTGTCACGTTTTTTTTTTTGGGTTGCGCGTCCGATGGTTCCTGTTATTGA GTGATTCTCTACAGCTTCTACAAGAACTTCGTGCTGACTTTCATCCTCTT CTACTACTCCTTCTTCACCGGGTTCAGTGGCCAGGTGTGTGTTCCTCTCG CTGTCACGTTTTTTTTTTTGGGTTGCGCGTCCGATGGTTCCTGTTATTGA back to top
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